Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058827.t1 | XP_003629912.1 | 99.8 | 544 | 1 | 0 | 1 | 544 | 1 | 544 | 2.90E-292 | 1013.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058827.t1 | P28769 | 90.6 | 544 | 51 | 0 | 1 | 544 | 1 | 544 | 4.6e-270 | 931.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058827.t1 | G7L831 | 99.8 | 544 | 1 | 0 | 1 | 544 | 1 | 544 | 2.1e-292 | 1013.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene058827 | 0.830986 | 2.16E-55 | -1.69E-46 |
| MS.gene050297 | MS.gene058827 | 0.80622 | 9.14E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene058827 | 0.80578 | 1.13E-49 | -1.69E-46 |
| MS.gene051629 | MS.gene058827 | 0.855038 | 8.25E-62 | -1.69E-46 |
| MS.gene051742 | MS.gene058827 | 0.812588 | 3.93E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene058827 | 0.822814 | 1.94E-53 | -1.69E-46 |
| MS.gene052308 | MS.gene058827 | 0.804429 | 2.17E-49 | -1.69E-46 |
| MS.gene052367 | MS.gene058827 | 0.84994 | 2.34E-60 | -1.69E-46 |
| MS.gene053348 | MS.gene058827 | 0.833196 | 6.13E-56 | -1.69E-46 |
| MS.gene053416 | MS.gene058827 | 0.826206 | 3.08E-54 | -1.69E-46 |
| MS.gene053417 | MS.gene058827 | 0.826524 | 2.59E-54 | -1.69E-46 |
| MS.gene053929 | MS.gene058827 | 0.807974 | 3.89E-50 | -1.69E-46 |
| MS.gene056041 | MS.gene058827 | 0.824992 | 5.98E-54 | -1.69E-46 |
| MS.gene05640 | MS.gene058827 | 0.827526 | 1.49E-54 | -1.69E-46 |
| MS.gene056526 | MS.gene058827 | 0.832031 | 1.19E-55 | -1.69E-46 |
| MS.gene05732 | MS.gene058827 | 0.817302 | 3.54E-52 | -1.69E-46 |
| MS.gene057669 | MS.gene058827 | 0.801706 | 7.93E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene058828 | 0.978871 | 9.66E-147 | -1.69E-46 |
| MS.gene058827 | MS.gene058853 | 0.815066 | 1.12E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene059553 | 0.81011 | 1.36E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene060473 | 0.873694 | 1.21E-67 | -1.69E-46 |
| MS.gene058827 | MS.gene060565 | 0.864869 | 8.91E-65 | -1.69E-46 |
| MS.gene058827 | MS.gene06093 | 0.837536 | 4.90E-57 | -1.69E-46 |
| MS.gene058827 | MS.gene061260 | 0.854702 | 1.03E-61 | -1.69E-46 |
| MS.gene058827 | MS.gene061275 | 0.837185 | 6.03E-57 | -1.69E-46 |
| MS.gene058827 | MS.gene061357 | 0.828489 | 8.74E-55 | -1.69E-46 |
| MS.gene058827 | MS.gene061775 | 0.805447 | 1.33E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene063035 | 0.82953 | 4.89E-55 | -1.69E-46 |
| MS.gene058827 | MS.gene063037 | 0.820055 | 8.39E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene064163 | 0.823157 | 1.61E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene064834 | 0.817798 | 2.74E-52 | -1.69E-46 |
| MS.gene058827 | MS.gene066104 | 0.833875 | 4.15E-56 | -1.69E-46 |
| MS.gene058827 | MS.gene066265 | 0.819982 | 8.72E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene066551 | 0.814938 | 1.19E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene066552 | 0.830449 | 2.92E-55 | -1.69E-46 |
| MS.gene058827 | MS.gene067030 | 0.810732 | 9.96E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene067074 | 0.817336 | 3.48E-52 | -1.69E-46 |
| MS.gene058827 | MS.gene067144 | 0.805524 | 1.28E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene069090 | 0.857663 | 1.40E-62 | -1.69E-46 |
| MS.gene058827 | MS.gene069339 | 0.864404 | 1.25E-64 | -1.69E-46 |
| MS.gene058827 | MS.gene069421 | 0.803658 | 3.14E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene07048 | 0.841185 | 5.54E-58 | -1.69E-46 |
| MS.gene058827 | MS.gene07051 | 0.817827 | 2.69E-52 | -1.69E-46 |
| MS.gene058827 | MS.gene07068 | 0.807061 | 6.07E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene071422 | 0.807049 | 6.11E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene072702 | 0.81699 | 4.16E-52 | -1.69E-46 |
| MS.gene058827 | MS.gene072952 | 0.803639 | 3.17E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene072954 | 0.805511 | 1.29E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene072956 | 0.816413 | 5.60E-52 | -1.69E-46 |
| MS.gene058827 | MS.gene072963 | 0.809803 | 1.58E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene073059 | 0.804033 | 2.62E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene073698 | 0.832777 | 7.79E-56 | -1.69E-46 |
| MS.gene058827 | MS.gene073798 | 0.804426 | 2.17E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene073862 | 0.823985 | 1.03E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene073863 | 0.801727 | 7.86E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene074451 | 0.853685 | 2.03E-61 | -1.69E-46 |
| MS.gene058827 | MS.gene08420 | 0.83427 | 3.30E-56 | -1.69E-46 |
| MS.gene058827 | MS.gene08836 | 0.83911 | 1.93E-57 | -1.69E-46 |
| MS.gene058827 | MS.gene08848 | 0.806959 | 6.38E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene08988 | 0.827838 | 1.25E-54 | -1.69E-46 |
| MS.gene058827 | MS.gene09014 | 0.809818 | 1.57E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene09124 | 0.806237 | 9.07E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene09177 | 0.837249 | 5.81E-57 | -1.69E-46 |
| MS.gene058827 | MS.gene09178 | 0.845108 | 4.99E-59 | -1.69E-46 |
| MS.gene058827 | MS.gene09234 | 0.820151 | 7.98E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene09245 | 0.807273 | 5.48E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene09258 | 0.841763 | 3.90E-58 | -1.69E-46 |
| MS.gene058827 | MS.gene09540 | 0.832627 | 8.49E-56 | -1.69E-46 |
| MS.gene058827 | MS.gene09543 | 0.830991 | 2.15E-55 | -1.69E-46 |
| MS.gene058827 | MS.gene09594 | 0.85139 | 9.16E-61 | -1.69E-46 |
| MS.gene058827 | MS.gene09801 | 0.813852 | 2.07E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene09808 | 0.850082 | 2.14E-60 | -1.69E-46 |
| MS.gene058827 | MS.gene20032 | 0.817223 | 3.69E-52 | -1.69E-46 |
| MS.gene058827 | MS.gene20224 | 0.856775 | 2.56E-62 | -1.69E-46 |
| MS.gene058827 | MS.gene21320 | 0.848119 | 7.51E-60 | -1.69E-46 |
| MS.gene058827 | MS.gene21888 | 0.805561 | 1.26E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene22383 | 0.81623 | 6.15E-52 | -1.69E-46 |
| MS.gene058827 | MS.gene22464 | 0.83241 | 9.60E-56 | -1.69E-46 |
| MS.gene058827 | MS.gene22500 | 0.823824 | 1.12E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene23323 | 0.849256 | 3.63E-60 | -1.69E-46 |
| MS.gene058827 | MS.gene24543 | 0.868627 | 5.67E-66 | -1.69E-46 |
| MS.gene058827 | MS.gene24699 | 0.807667 | 4.52E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene24830 | 0.821215 | 4.55E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene26109 | 0.815283 | 1.00E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene26114 | 0.860427 | 2.08E-63 | -1.69E-46 |
| MS.gene058827 | MS.gene26619 | 0.820535 | 6.51E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene26706 | 0.821632 | 3.64E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene26803 | 0.844782 | 6.11E-59 | -1.69E-46 |
| MS.gene058827 | MS.gene27811 | 0.833819 | 4.28E-56 | -1.69E-46 |
| MS.gene058827 | MS.gene27812 | 0.838373 | 2.99E-57 | -1.69E-46 |
| MS.gene058827 | MS.gene27902 | 0.997802 | 1.61E-249 | -1.69E-46 |
| MS.gene058827 | MS.gene27941 | 0.846335 | 2.32E-59 | -1.69E-46 |
| MS.gene058827 | MS.gene28079 | 0.82203 | 2.95E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene28807 | 0.821574 | 3.76E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene28867 | 0.830307 | 3.16E-55 | -1.69E-46 |
| MS.gene058827 | MS.gene31115 | 0.805505 | 1.29E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene31238 | 0.800079 | 1.71E-48 | -1.69E-46 |
| MS.gene058827 | MS.gene32513 | 0.814928 | 1.20E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene32514 | 0.847491 | 1.12E-59 | -1.69E-46 |
| MS.gene058827 | MS.gene32638 | 0.82706 | 1.93E-54 | -1.69E-46 |
| MS.gene058827 | MS.gene32975 | 0.854165 | 1.48E-61 | -1.69E-46 |
| MS.gene058827 | MS.gene35150 | 0.845979 | 2.90E-59 | -1.69E-46 |
| MS.gene058827 | MS.gene35668 | 0.849975 | 2.29E-60 | -1.69E-46 |
| MS.gene058827 | MS.gene35715 | 0.803102 | 4.09E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene36485 | 0.8494 | 3.31E-60 | -1.69E-46 |
| MS.gene058827 | MS.gene36524 | 0.825969 | 3.51E-54 | -1.69E-46 |
| MS.gene058827 | MS.gene37573 | 0.804431 | 2.17E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene37845 | 0.80201 | 6.87E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene37925 | 0.830812 | 2.38E-55 | -1.69E-46 |
| MS.gene058827 | MS.gene38828 | 0.819385 | 1.19E-52 | -1.69E-46 |
| MS.gene058827 | MS.gene40329 | 0.813405 | 2.60E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene40335 | 0.84046 | 8.58E-58 | -1.69E-46 |
| MS.gene058827 | MS.gene40405 | 0.840856 | 6.76E-58 | -1.69E-46 |
| MS.gene058827 | MS.gene40697 | 0.801198 | 1.01E-48 | -1.69E-46 |
| MS.gene058827 | MS.gene40797 | 0.822687 | 2.07E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene41273 | 0.858086 | 1.05E-62 | -1.69E-46 |
| MS.gene058827 | MS.gene42910 | 0.853229 | 2.74E-61 | -1.69E-46 |
| MS.gene058827 | MS.gene44100 | 0.820545 | 6.48E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene44181 | 0.831409 | 1.70E-55 | -1.69E-46 |
| MS.gene058827 | MS.gene44251 | 0.821811 | 3.31E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene44386 | 0.832699 | 8.15E-56 | -1.69E-46 |
| MS.gene058827 | MS.gene45534 | 0.808398 | 3.16E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene47007 | 0.817993 | 2.47E-52 | -1.69E-46 |
| MS.gene058827 | MS.gene47439 | 0.807673 | 4.51E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene47899 | 0.837205 | 5.96E-57 | -1.69E-46 |
| MS.gene058827 | MS.gene48067 | 0.855574 | 5.76E-62 | -1.69E-46 |
| MS.gene058827 | MS.gene49165 | 0.823527 | 1.32E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene49312 | 0.836716 | 7.95E-57 | -1.69E-46 |
| MS.gene058827 | MS.gene49744 | 0.834136 | 3.57E-56 | -1.69E-46 |
| MS.gene058827 | MS.gene50484 | 0.849513 | 3.08E-60 | -1.69E-46 |
| MS.gene058827 | MS.gene50613 | 0.822504 | 2.29E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene50736 | 0.839377 | 1.64E-57 | -1.69E-46 |
| MS.gene058827 | MS.gene51554 | 0.814992 | 1.16E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene52113 | 0.804221 | 2.40E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene52607 | 0.810985 | 8.78E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene52624 | 0.805041 | 1.62E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene53408 | 0.834969 | 2.20E-56 | -1.69E-46 |
| MS.gene058827 | MS.gene53887 | 0.820423 | 6.91E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene54436 | 0.908218 | 2.17E-81 | -1.69E-46 |
| MS.gene058827 | MS.gene54437 | 0.812982 | 3.22E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene55817 | 0.840869 | 6.70E-58 | -1.69E-46 |
| MS.gene058827 | MS.gene55819 | 0.809738 | 1.63E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene56272 | 0.815609 | 8.47E-52 | -1.69E-46 |
| MS.gene058827 | MS.gene57219 | 0.859388 | 4.28E-63 | -1.69E-46 |
| MS.gene058827 | MS.gene57288 | 0.827331 | 1.66E-54 | -1.69E-46 |
| MS.gene058827 | MS.gene57289 | 0.815701 | 8.08E-52 | -1.69E-46 |
| MS.gene058827 | MS.gene57751 | 0.826426 | 2.73E-54 | -1.69E-46 |
| MS.gene058827 | MS.gene57752 | 0.829181 | 5.94E-55 | -1.69E-46 |
| MS.gene058827 | MS.gene58234 | 0.826897 | 2.11E-54 | -1.69E-46 |
| MS.gene058827 | MS.gene58754 | 0.825644 | 4.19E-54 | -1.69E-46 |
| MS.gene058827 | MS.gene58835 | 0.832834 | 7.54E-56 | -1.69E-46 |
| MS.gene058827 | MS.gene59357 | 0.856054 | 4.17E-62 | -1.69E-46 |
| MS.gene058827 | MS.gene59466 | 0.827748 | 1.32E-54 | -1.69E-46 |
| MS.gene058827 | MS.gene61081 | 0.812686 | 3.74E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene61684 | 0.804118 | 2.52E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene61977 | 0.859034 | 5.47E-63 | -1.69E-46 |
| MS.gene058827 | MS.gene63265 | 0.805806 | 1.12E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene64538 | 0.82576 | 3.93E-54 | -1.69E-46 |
| MS.gene058827 | MS.gene64859 | 0.807681 | 4.49E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene65301 | 0.82078 | 5.72E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene65431 | 0.806239 | 9.06E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene67223 | 0.834954 | 2.22E-56 | -1.69E-46 |
| MS.gene058827 | MS.gene68361 | 0.815066 | 1.12E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene68610 | 0.816341 | 5.81E-52 | -1.69E-46 |
| MS.gene058827 | MS.gene69328 | 0.81887 | 1.56E-52 | -1.69E-46 |
| MS.gene058827 | MS.gene70141 | 0.811909 | 5.53E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene70403 | 0.835428 | 1.69E-56 | -1.69E-46 |
| MS.gene058827 | MS.gene71431 | 0.84017 | 1.02E-57 | -1.69E-46 |
| MS.gene058827 | MS.gene72088 | 0.830406 | 2.99E-55 | -1.69E-46 |
| MS.gene058827 | MS.gene72708 | 0.81834 | 2.06E-52 | -1.69E-46 |
| MS.gene058827 | MS.gene74232 | 0.815954 | 7.09E-52 | -1.69E-46 |
| MS.gene058827 | MS.gene74328 | 0.853722 | 1.98E-61 | -1.69E-46 |
| MS.gene058827 | MS.gene75318 | 0.810304 | 1.23E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene75320 | 0.807258 | 5.52E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene75579 | 0.816713 | 4.80E-52 | -1.69E-46 |
| MS.gene058827 | MS.gene75642 | 0.868613 | 5.73E-66 | -1.69E-46 |
| MS.gene058827 | MS.gene75728 | 0.808645 | 2.80E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene75915 | 0.80632 | 8.71E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene77476 | 0.817422 | 3.32E-52 | -1.69E-46 |
| MS.gene058827 | MS.gene77563 | 0.851952 | 6.35E-61 | -1.69E-46 |
| MS.gene058827 | MS.gene78112 | 0.812487 | 4.14E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene78156 | 0.824745 | 6.83E-54 | -1.69E-46 |
| MS.gene058827 | MS.gene78534 | 0.800977 | 1.12E-48 | -1.69E-46 |
| MS.gene058827 | MS.gene78741 | 0.856846 | 2.44E-62 | -1.69E-46 |
| MS.gene058827 | MS.gene78742 | 0.821912 | 3.14E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene78972 | 0.811006 | 8.69E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene79251 | 0.851248 | 1.00E-60 | -1.69E-46 |
| MS.gene058827 | MS.gene79921 | 0.866293 | 3.17E-65 | -1.69E-46 |
| MS.gene058827 | MS.gene80276 | 0.823155 | 1.61E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene80994 | 0.843132 | 1.69E-58 | -1.69E-46 |
| MS.gene058827 | MS.gene81197 | 0.829402 | 5.25E-55 | -1.69E-46 |
| MS.gene058827 | MS.gene89107 | 0.809337 | 1.99E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene89653 | 0.821316 | 4.31E-53 | -1.69E-46 |
| MS.gene058827 | MS.gene90380 | 0.80668 | 7.31E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene90876 | 0.815028 | 1.14E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene91781 | 0.825115 | 5.59E-54 | -1.69E-46 |
| MS.gene058827 | MS.gene92758 | 0.80337 | 3.60E-49 | -1.69E-46 |
| MS.gene058827 | MS.gene93102 | 0.824739 | 6.86E-54 | -1.69E-46 |
| MS.gene058827 | MS.gene96186 | 0.811725 | 6.06E-51 | -1.69E-46 |
| MS.gene058827 | MS.gene96390 | 0.845281 | 4.48E-59 | -1.69E-46 |
| MS.gene058827 | MS.gene97190 | 0.808704 | 2.72E-50 | -1.69E-46 |
| MS.gene058827 | MS.gene97876 | 0.86243 | 5.10E-64 | -1.69E-46 |
| MS.gene058827 | MS.gene99337 | 0.860912 | 1.48E-63 | -1.69E-46 |
| MS.gene058827 | MS.gene99432 | 0.808269 | 3.37E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058827.t1 | MTR_8g088270 | 99.816 | 544 | 1 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1097 |
| MS.gene058827.t1 | MTR_8g010750 | 70.025 | 407 | 26 | 8 | 21 | 376 | 30 | 391 | 8.46e-175 | 503 |
| MS.gene058827.t1 | MTR_5g087560 | 37.665 | 531 | 305 | 8 | 17 | 540 | 21 | 532 | 2.87e-110 | 340 |
| MS.gene058827.t1 | MTR_7g113470 | 35.120 | 541 | 319 | 10 | 1 | 534 | 1 | 516 | 1.49e-91 | 290 |
| MS.gene058827.t1 | MTR_7g067470 | 35.104 | 527 | 311 | 9 | 15 | 534 | 14 | 516 | 2.97e-90 | 287 |
| MS.gene058827.t1 | MTR_3g109925 | 34.286 | 525 | 317 | 9 | 19 | 534 | 24 | 529 | 3.84e-81 | 263 |
| MS.gene058827.t1 | MTR_3g086330 | 32.707 | 532 | 329 | 10 | 11 | 534 | 20 | 530 | 9.00e-73 | 241 |
| MS.gene058827.t1 | MTR_2g013540 | 30.697 | 531 | 347 | 8 | 13 | 538 | 13 | 527 | 2.90e-71 | 238 |
| MS.gene058827.t1 | MTR_1g030650 | 30.174 | 517 | 335 | 9 | 23 | 534 | 28 | 523 | 2.16e-66 | 224 |
| MS.gene058827.t1 | MTR_3g109925 | 31.309 | 527 | 273 | 10 | 19 | 534 | 24 | 472 | 5.79e-64 | 216 |
| MS.gene058827.t1 | MTR_6g032870 | 29.400 | 517 | 339 | 9 | 23 | 534 | 25 | 520 | 4.53e-63 | 216 |
| MS.gene058827.t1 | MTR_7g406870 | 26.857 | 525 | 351 | 8 | 24 | 535 | 22 | 526 | 4.57e-56 | 197 |
| MS.gene058827.t1 | MTR_7g406870 | 24.654 | 434 | 294 | 8 | 115 | 535 | 1 | 414 | 4.92e-34 | 134 |
| MS.gene058827.t1 | MTR_2g013540 | 26.463 | 393 | 269 | 7 | 151 | 538 | 1 | 378 | 1.57e-31 | 126 |
| MS.gene058827.t1 | MTR_8g105970 | 27.931 | 290 | 150 | 7 | 225 | 500 | 109 | 353 | 7.53e-18 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058827.t1 | AT3G20050 | 90.625 | 544 | 51 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1006 |
| MS.gene058827.t1 | AT3G11830 | 37.023 | 524 | 304 | 6 | 24 | 540 | 28 | 532 | 1.27e-103 | 323 |
| MS.gene058827.t1 | AT3G11830 | 37.023 | 524 | 302 | 7 | 24 | 540 | 28 | 530 | 2.59e-102 | 319 |
| MS.gene058827.t1 | AT3G18190 | 35.606 | 528 | 308 | 11 | 18 | 534 | 27 | 533 | 2.14e-88 | 282 |
| MS.gene058827.t1 | AT5G20890 | 34.594 | 529 | 311 | 11 | 15 | 534 | 14 | 516 | 1.61e-82 | 267 |
| MS.gene058827.t1 | AT1G24510 | 32.197 | 528 | 331 | 7 | 14 | 534 | 23 | 530 | 3.13e-73 | 243 |
| MS.gene058827.t1 | AT5G26360 | 30.624 | 529 | 350 | 6 | 13 | 538 | 13 | 527 | 9.21e-72 | 239 |
| MS.gene058827.t1 | AT3G03960 | 29.594 | 517 | 338 | 9 | 23 | 534 | 31 | 526 | 2.37e-64 | 219 |
| MS.gene058827.t1 | AT3G02530 | 28.681 | 523 | 338 | 9 | 27 | 535 | 25 | 526 | 3.83e-61 | 211 |
| MS.gene058827.t1 | AT5G16070 | 28.269 | 520 | 343 | 8 | 27 | 535 | 25 | 525 | 7.83e-60 | 207 |
| MS.gene058827.t1 | AT1G24510 | 30.247 | 486 | 312 | 7 | 56 | 534 | 12 | 477 | 2.05e-58 | 202 |
| MS.gene058827.t1 | AT1G24510 | 29.536 | 474 | 307 | 7 | 68 | 534 | 1 | 454 | 5.59e-53 | 187 |
| MS.gene058827.t1 | AT5G56500 | 22.939 | 558 | 329 | 20 | 31 | 539 | 74 | 579 | 1.27e-11 | 67.8 |
| MS.gene058827.t1 | AT5G56500 | 22.939 | 558 | 329 | 20 | 31 | 539 | 74 | 579 | 1.27e-11 | 67.8 |
Find 109 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTGCATTATCAGTTTATT+TGG | 0.170818 | 4.1:+12347606 | MS.gene058827:CDS |
| CAGTGATTTCTTTGCTAATT+TGG | 0.196704 | 4.1:+12341937 | MS.gene058827:CDS |
| GAATACCTTGCTACAACTTT+AGG | 0.217589 | 4.1:+12347628 | MS.gene058827:CDS |
| CTGCCCAAGGAATGCCTCTT+AGG | 0.219812 | 4.1:+12343619 | MS.gene058827:CDS |
| GATGCTGTAATCATGATTAA+AGG | 0.288628 | 4.1:+12345511 | MS.gene058827:CDS |
| ATTCTACTACCAACCTTGAT+TGG | 0.298920 | 4.1:-12343353 | None:intergenic |
| GGTTGAACTTGCTGAACTTC+AGG | 0.305715 | 4.1:+12340780 | MS.gene058827:CDS |
| GGTCTCAACATTTGCTGATA+TGG | 0.306308 | 4.1:+12345417 | MS.gene058827:intron |
| CTATCTTTCCAGTACGGGTT+TGG | 0.307511 | 4.1:+12348526 | MS.gene058827:intron |
| ACTTACTGCACTTGAAGTTT+TGG | 0.311156 | 4.1:-12345536 | None:intergenic |
| GAGCAAAGTCAAAATTATTC+AGG | 0.342350 | 4.1:+12348607 | MS.gene058827:CDS |
| CAATGTTGCACCGGTTGCTT+TGG | 0.351517 | 4.1:-12344903 | None:intergenic |
| CTTTGAGGACATGCTGGTCT+TGG | 0.352985 | 4.1:-12341900 | None:intergenic |
| CAGACCTGGTTGCTAAATTA+CGG | 0.358667 | 4.1:+12348082 | MS.gene058827:CDS |
| AATTGATGACATGGCGCTTA+AGG | 0.368284 | 4.1:+12344126 | MS.gene058827:CDS |
| AATGGTTATGCTCTTAATAC+TGG | 0.369065 | 4.1:+12343591 | MS.gene058827:CDS |
| CAGATGCTTGTTGATGATAT+CGG | 0.399758 | 4.1:+12340597 | MS.gene058827:intron |
| TTTCAGTACTTTGTTGAGGC+TGG | 0.410605 | 4.1:+12344833 | MS.gene058827:intron |
| AACCAGGTCTGTGGCATCCT+TGG | 0.425381 | 4.1:-12348070 | None:intergenic |
| TTCTACTACCAACCTTGATT+GGG | 0.427473 | 4.1:-12343352 | None:intergenic |
| ATTCAGGTGGTGGCTGGTGG+AGG | 0.433679 | 4.1:+12347574 | MS.gene058827:intron |
| CTTGAGAAATCTTACCTTGA+CGG | 0.434983 | 4.1:-12341166 | None:intergenic |
| AGAGAGCTAATGATCTTGTT+AGG | 0.440419 | 4.1:+12340937 | MS.gene058827:intron |
| TGCGGACGTCTTGGCCGGAT+TGG | 0.445829 | 4.1:-12340317 | None:intergenic |
| CGTCATGTTGCCAAAGCAAC+CGG | 0.451920 | 4.1:+12344893 | MS.gene058827:CDS |
| AATGTTGTTCTGACTACTAA+AGG | 0.453936 | 4.1:+12344103 | MS.gene058827:CDS |
| CACTTGTAGGTTGAGAAGCT+TGG | 0.454077 | 4.1:+12341854 | MS.gene058827:intron |
| GAACTTCAGGATAGAGAAGT+TGG | 0.456067 | 4.1:+12340793 | MS.gene058827:CDS |
| AAGTATTAGTTTCTGATCCC+AGG | 0.456823 | 4.1:+12343709 | MS.gene058827:CDS |
| AGACCTGGTTGCTAAATTAC+GGG | 0.457737 | 4.1:+12348083 | MS.gene058827:CDS |
| ATGCTGTAATCATGATTAAA+GGG | 0.460572 | 4.1:+12345512 | MS.gene058827:CDS |
| TGTAAAGATGACTAACCAAC+GGG | 0.463714 | 4.1:+12343316 | MS.gene058827:CDS |
| GTCACCAGCTATCAGCTTTG+AGG | 0.466133 | 4.1:-12341915 | None:intergenic |
| TGGCGTTCGCCGGAGATGTC+AGG | 0.467083 | 4.1:-12340297 | None:intergenic |
| TTGAGTGCGGACGTCTTGGC+CGG | 0.473398 | 4.1:-12340322 | None:intergenic |
| ATCTCCGGCGAACGCCAATC+CGG | 0.474311 | 4.1:+12340303 | MS.gene058827:CDS |
| TGTACCTTGTCGAGACCAAC+GGG | 0.479862 | 4.1:-12340494 | None:intergenic |
| AGTTTGTGCAGCATAGTGGC+AGG | 0.480386 | 4.1:-12348106 | None:intergenic |
| ATACCCTAAGAGGCATTCCT+TGG | 0.482129 | 4.1:-12343623 | None:intergenic |
| ACTAGAAACAACTTGGAAGC+TGG | 0.485060 | 4.1:+12348566 | MS.gene058827:CDS |
| GCTTGTCAAGGATGAAGGTC+AGG | 0.491199 | 4.1:+12348775 | MS.gene058827:CDS |
| AGACGAAAAGCTTGCCGTCA+AGG | 0.498910 | 4.1:+12341152 | MS.gene058827:CDS |
| GCTTGATCATATCGTCAATC+CGG | 0.503371 | 4.1:-12348754 | None:intergenic |
| TGCCCAAGGAATGCCTCTTA+GGG | 0.506306 | 4.1:+12343620 | MS.gene058827:CDS |
| TCAGGGAATCAATATATTGA+AGG | 0.506625 | 4.1:+12343533 | MS.gene058827:intron |
| TGCTACAACTTTAGGATCGC+GGG | 0.508460 | 4.1:+12347636 | MS.gene058827:CDS |
| CAAAGCAACCGGTGCAACAT+TGG | 0.508709 | 4.1:+12344904 | MS.gene058827:CDS |
| ATCAAGCTTGTCAAGGATGA+AGG | 0.509988 | 4.1:+12348770 | MS.gene058827:CDS |
| TCTATATCCACTGATAATTG+AGG | 0.510888 | 4.1:-12340976 | None:intergenic |
| TTTAGGATCGCGGGAGCAGT+TGG | 0.511859 | 4.1:+12347645 | MS.gene058827:CDS |
| AAGCTGCTATTACTATTCTC+CGG | 0.516464 | 4.1:+12348735 | MS.gene058827:CDS |
| TTGGCCGGATTGGCGTTCGC+CGG | 0.521185 | 4.1:-12340307 | None:intergenic |
| TGCTACTATACTTAAGATGC+TGG | 0.521772 | 4.1:+12340644 | MS.gene058827:CDS |
| TACCCTAAGAGGCATTCCTT+GGG | 0.521776 | 4.1:-12343622 | None:intergenic |
| TGACTACATGCTTGATGAGA+TGG | 0.525127 | 4.1:+12346393 | MS.gene058827:CDS |
| ATGTAAATTCAGGTGGTGGC+TGG | 0.525195 | 4.1:+12347568 | MS.gene058827:intron |
| AGTTGAACATCCCGCTGCTA+AGG | 0.529381 | 4.1:+12340668 | MS.gene058827:CDS |
| CTTTAGTTTGTGCAGCATAG+TGG | 0.535439 | 4.1:-12348110 | None:intergenic |
| AGTATTAGTTTCTGATCCCA+GGG | 0.537249 | 4.1:+12343710 | MS.gene058827:CDS |
| CAGAGAGGCTGACATGACTA+AGG | 0.538129 | 4.1:+12344048 | MS.gene058827:intron |
| ATGTCCTCAAAGCTGATAGC+TGG | 0.539484 | 4.1:+12341911 | MS.gene058827:CDS |
| ATCGAGAAATTACTGAAAGC+TGG | 0.540178 | 4.1:+12344076 | MS.gene058827:CDS |
| AATCAAACTCCTGACATCTC+CGG | 0.541969 | 4.1:+12340288 | MS.gene058827:CDS |
| TTTGCAGGGGATACCCTAAG+AGG | 0.545005 | 4.1:-12343633 | None:intergenic |
| CAAGACGTCCGCACTCAAAA+CGG | 0.547818 | 4.1:+12340327 | MS.gene058827:CDS |
| TAAATTCAGGTGGTGGCTGG+TGG | 0.548875 | 4.1:+12347571 | MS.gene058827:intron |
| TATCAGCTTTGAGGACATGC+TGG | 0.550203 | 4.1:-12341906 | None:intergenic |
| AGGAAAGACTAGAAACAACT+TGG | 0.552501 | 4.1:+12348559 | MS.gene058827:CDS |
| CAGATAAGAAGCATTTATCA+AGG | 0.555568 | 4.1:+12348133 | MS.gene058827:CDS |
| ATTAGATTAACCTTAGCAGC+GGG | 0.562482 | 4.1:-12340678 | None:intergenic |
| TCAACATTTGCTGATATGGA+AGG | 0.562540 | 4.1:+12345421 | MS.gene058827:CDS |
| TTGTACCTTGTCGAGACCAA+CGG | 0.566679 | 4.1:-12340495 | None:intergenic |
| CTGGTTTCAGTACTTTGTTG+AGG | 0.569526 | 4.1:+12344829 | MS.gene058827:intron |
| AACATTTGCTGATATGGAAG+GGG | 0.570131 | 4.1:+12345423 | MS.gene058827:CDS |
| ACGGGTTTGGATCTTTCAGA+AGG | 0.572129 | 4.1:+12348539 | MS.gene058827:CDS |
| TATCCACTGATAATTGAGGT+TGG | 0.573056 | 4.1:-12340972 | None:intergenic |
| ATTTCTTGGAACTGCAGATG+AGG | 0.576660 | 4.1:+12345465 | MS.gene058827:CDS |
| GTCTCTGTTAATCATTCCAA+AGG | 0.580186 | 4.1:+12347687 | MS.gene058827:CDS |
| AATACTGGACGTGCTGCCCA+AGG | 0.580408 | 4.1:+12343606 | MS.gene058827:CDS |
| CAACATTTGCTGATATGGAA+GGG | 0.582382 | 4.1:+12345422 | MS.gene058827:CDS |
| GGTATCTGACTTCACCCCGT+TGG | 0.587784 | 4.1:-12343331 | None:intergenic |
| GCTTGCTGTCAATGCTGCCA+AGG | 0.590241 | 4.1:+12348053 | MS.gene058827:CDS |
| AACTGCAGATGAGGTTGTTG+AGG | 0.595904 | 4.1:+12345474 | MS.gene058827:CDS |
| TAGGTCTCGTTAATTCTCAG+AGG | 0.599649 | 4.1:+12346364 | MS.gene058827:intron |
| AAAACCTCACTCGGTCCCGT+TGG | 0.602554 | 4.1:+12340479 | MS.gene058827:CDS |
| TGAAGTCAGATACCCAATCA+AGG | 0.604042 | 4.1:+12343340 | MS.gene058827:CDS |
| ATTTGCTGATATGGAAGGGG+AGG | 0.604182 | 4.1:+12345426 | MS.gene058827:CDS |
| TGCCAAGGATGCCACAGACC+TGG | 0.605336 | 4.1:+12348068 | MS.gene058827:CDS |
| CGATATGATCAAGCTTGTCA+AGG | 0.608330 | 4.1:+12348763 | MS.gene058827:CDS |
| GATGTGACTATTACTAATGA+TGG | 0.618021 | 4.1:+12340621 | MS.gene058827:CDS |
| AAGGCATACCAATGTTGCAC+CGG | 0.620442 | 4.1:-12344912 | None:intergenic |
| GAGACCAACGGGACCGAGTG+AGG | 0.622750 | 4.1:-12340483 | None:intergenic |
| CGGTCCCGTTGGTCTCGACA+AGG | 0.624347 | 4.1:+12340490 | MS.gene058827:CDS |
| AACTCGAGAAAATTCGCCAA+AGG | 0.625053 | 4.1:+12343733 | MS.gene058827:CDS |
| TTGCTACAACTTTAGGATCG+CGG | 0.632065 | 4.1:+12347635 | MS.gene058827:CDS |
| TGGAATGATTAACAGAGACT+CGG | 0.632335 | 4.1:-12347683 | None:intergenic |
| CTGTAAAGATGACTAACCAA+CGG | 0.633990 | 4.1:+12343315 | MS.gene058827:CDS |
| TAATTTAGCAACCAGGTCTG+TGG | 0.634341 | 4.1:-12348079 | None:intergenic |
| AATTAGATTAACCTTAGCAG+CGG | 0.635062 | 4.1:-12340679 | None:intergenic |
| AGGCCCGTAATTTAGCAACC+AGG | 0.638171 | 4.1:-12348086 | None:intergenic |
| CATCCAACCTCAATTATCAG+TGG | 0.640722 | 4.1:+12340969 | MS.gene058827:CDS |
| TCTGCAGTTCCAAGAAATGA+CGG | 0.640766 | 4.1:-12345460 | None:intergenic |
| AACATCGTGAAAACCTCACT+CGG | 0.643474 | 4.1:+12340470 | MS.gene058827:CDS |
| ATCAATATATTGAAGGCACA+TGG | 0.646632 | 4.1:+12343540 | MS.gene058827:CDS |
| TACTAAAGGAATTGATGACA+TGG | 0.657873 | 4.1:+12344117 | MS.gene058827:CDS |
| GCGATCCTAAAGTTGTAGCA+AGG | 0.663247 | 4.1:-12347633 | None:intergenic |
| CAGGATAGAGAAGTTGGAGA+CGG | 0.685651 | 4.1:+12340799 | MS.gene058827:CDS |
| CAATTGCTGTGAGACGTGTG+CGG | 0.806188 | 4.1:+12344858 | MS.gene058827:CDS |
| GTAAAGATGACTAACCAACG+GGG | 0.853539 | 4.1:+12343317 | MS.gene058827:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 12340276 | 12348805 | 12340276 | ID=MS.gene058827 |
| chr4.1 | mRNA | 12340276 | 12348805 | 12340276 | ID=MS.gene058827.t1;Parent=MS.gene058827 |
| chr4.1 | exon | 12340276 | 12340348 | 12340276 | ID=MS.gene058827.t1.exon1;Parent=MS.gene058827.t1 |
| chr4.1 | CDS | 12340276 | 12340348 | 12340276 | ID=cds.MS.gene058827.t1;Parent=MS.gene058827.t1 |
| chr4.1 | exon | 12340447 | 12340511 | 12340447 | ID=MS.gene058827.t1.exon2;Parent=MS.gene058827.t1 |
| chr4.1 | CDS | 12340447 | 12340511 | 12340447 | ID=cds.MS.gene058827.t1;Parent=MS.gene058827.t1 |
| chr4.1 | exon | 12340600 | 12340689 | 12340600 | ID=MS.gene058827.t1.exon3;Parent=MS.gene058827.t1 |
| chr4.1 | CDS | 12340600 | 12340689 | 12340600 | ID=cds.MS.gene058827.t1;Parent=MS.gene058827.t1 |
| chr4.1 | exon | 12340775 | 12340861 | 12340775 | ID=MS.gene058827.t1.exon4;Parent=MS.gene058827.t1 |
| chr4.1 | CDS | 12340775 | 12340861 | 12340775 | ID=cds.MS.gene058827.t1;Parent=MS.gene058827.t1 |
| chr4.1 | exon | 12340939 | 12340998 | 12340939 | ID=MS.gene058827.t1.exon5;Parent=MS.gene058827.t1 |
| chr4.1 | CDS | 12340939 | 12340998 | 12340939 | ID=cds.MS.gene058827.t1;Parent=MS.gene058827.t1 |
| chr4.1 | exon | 12341123 | 12341173 | 12341123 | ID=MS.gene058827.t1.exon6;Parent=MS.gene058827.t1 |
| chr4.1 | CDS | 12341123 | 12341173 | 12341123 | ID=cds.MS.gene058827.t1;Parent=MS.gene058827.t1 |
| chr4.1 | exon | 12341863 | 12341958 | 12341863 | ID=MS.gene058827.t1.exon7;Parent=MS.gene058827.t1 |
| chr4.1 | CDS | 12341863 | 12341958 | 12341863 | ID=cds.MS.gene058827.t1;Parent=MS.gene058827.t1 |
| chr4.1 | exon | 12343296 | 12343361 | 12343296 | ID=MS.gene058827.t1.exon8;Parent=MS.gene058827.t1 |
| chr4.1 | CDS | 12343296 | 12343361 | 12343296 | ID=cds.MS.gene058827.t1;Parent=MS.gene058827.t1 |
| chr4.1 | exon | 12343537 | 12343754 | 12343537 | ID=MS.gene058827.t1.exon9;Parent=MS.gene058827.t1 |
| chr4.1 | CDS | 12343537 | 12343754 | 12343537 | ID=cds.MS.gene058827.t1;Parent=MS.gene058827.t1 |
| chr4.1 | exon | 12344051 | 12344147 | 12344051 | ID=MS.gene058827.t1.exon10;Parent=MS.gene058827.t1 |
| chr4.1 | CDS | 12344051 | 12344147 | 12344051 | ID=cds.MS.gene058827.t1;Parent=MS.gene058827.t1 |
| chr4.1 | exon | 12344839 | 12344925 | 12344839 | ID=MS.gene058827.t1.exon11;Parent=MS.gene058827.t1 |
| chr4.1 | CDS | 12344839 | 12344925 | 12344839 | ID=cds.MS.gene058827.t1;Parent=MS.gene058827.t1 |
| chr4.1 | exon | 12345418 | 12345552 | 12345418 | ID=MS.gene058827.t1.exon12;Parent=MS.gene058827.t1 |
| chr4.1 | CDS | 12345418 | 12345552 | 12345418 | ID=cds.MS.gene058827.t1;Parent=MS.gene058827.t1 |
| chr4.1 | exon | 12346367 | 12346471 | 12346367 | ID=MS.gene058827.t1.exon13;Parent=MS.gene058827.t1 |
| chr4.1 | CDS | 12346367 | 12346471 | 12346367 | ID=cds.MS.gene058827.t1;Parent=MS.gene058827.t1 |
| chr4.1 | exon | 12347580 | 12347708 | 12347580 | ID=MS.gene058827.t1.exon14;Parent=MS.gene058827.t1 |
| chr4.1 | CDS | 12347580 | 12347708 | 12347580 | ID=cds.MS.gene058827.t1;Parent=MS.gene058827.t1 |
| chr4.1 | exon | 12348051 | 12348154 | 12348051 | ID=MS.gene058827.t1.exon15;Parent=MS.gene058827.t1 |
| chr4.1 | CDS | 12348051 | 12348154 | 12348051 | ID=cds.MS.gene058827.t1;Parent=MS.gene058827.t1 |
| chr4.1 | exon | 12348538 | 12348628 | 12348538 | ID=MS.gene058827.t1.exon16;Parent=MS.gene058827.t1 |
| chr4.1 | CDS | 12348538 | 12348628 | 12348538 | ID=cds.MS.gene058827.t1;Parent=MS.gene058827.t1 |
| chr4.1 | exon | 12348725 | 12348805 | 12348725 | ID=MS.gene058827.t1.exon17;Parent=MS.gene058827.t1 |
| chr4.1 | CDS | 12348725 | 12348805 | 12348725 | ID=cds.MS.gene058827.t1;Parent=MS.gene058827.t1 |
| Gene Sequence |
| Protein sequence |
