Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074159.t1 | XP_013451351.1 | 86.8 | 584 | 63 | 3 | 1 | 582 | 1 | 572 | 3.10E-215 | 758.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074159.t1 | Q67Y69 | 61.8 | 55 | 19 | 1 | 21 | 75 | 12 | 64 | 6.7e-09 | 63.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074159.t1 | A0A072U7R9 | 86.8 | 584 | 63 | 3 | 1 | 582 | 1 | 572 | 2.2e-215 | 758.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene074159 | 0.816706 | 4.82E-52 | -1.69E-46 |
| MS.gene050297 | MS.gene074159 | 0.820296 | 7.39E-53 | -1.69E-46 |
| MS.gene058197 | MS.gene074159 | 0.807702 | 4.44E-50 | -1.69E-46 |
| MS.gene058198 | MS.gene074159 | 0.807519 | 4.86E-50 | -1.69E-46 |
| MS.gene059300 | MS.gene074159 | 0.811281 | 7.57E-51 | -1.69E-46 |
| MS.gene06057 | MS.gene074159 | 0.835362 | 1.75E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074159.t1 | MTR_6g022230 | 90.411 | 584 | 42 | 4 | 1 | 582 | 1 | 572 | 0.0 | 1040 |
| MS.gene074159.t1 | MTR_0117s0080 | 48.780 | 205 | 78 | 4 | 1 | 204 | 6 | 184 | 7.26e-40 | 149 |
| MS.gene074159.t1 | MTR_0117s0080 | 36.842 | 285 | 93 | 7 | 298 | 581 | 181 | 379 | 3.03e-31 | 125 |
| MS.gene074159.t1 | MTR_3g086090 | 54.198 | 131 | 52 | 3 | 4 | 133 | 5 | 128 | 4.95e-32 | 131 |
| MS.gene074159.t1 | MTR_3g086090 | 54.198 | 131 | 52 | 3 | 4 | 133 | 5 | 128 | 5.15e-32 | 131 |
| MS.gene074159.t1 | MTR_3g086090 | 60.000 | 105 | 35 | 2 | 29 | 133 | 12 | 109 | 2.24e-29 | 123 |
| MS.gene074159.t1 | MTR_5g036560 | 61.972 | 71 | 27 | 0 | 26 | 96 | 7 | 77 | 8.21e-23 | 102 |
| MS.gene074159.t1 | MTR_3g055390 | 73.077 | 52 | 14 | 0 | 369 | 420 | 33 | 84 | 7.30e-19 | 82.4 |
| MS.gene074159.t1 | MTR_1g012530 | 45.556 | 90 | 44 | 3 | 426 | 512 | 228 | 315 | 2.74e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074159.t1 | AT3G27350 | 65.625 | 96 | 32 | 1 | 1 | 95 | 1 | 96 | 4.58e-36 | 136 |
| MS.gene074159.t1 | AT3G27350 | 65.625 | 96 | 32 | 1 | 1 | 95 | 1 | 96 | 2.80e-35 | 135 |
| MS.gene074159.t1 | AT3G01710 | 71.951 | 82 | 16 | 2 | 1 | 81 | 1 | 76 | 3.27e-31 | 124 |
| MS.gene074159.t1 | AT3G01710 | 71.951 | 82 | 16 | 2 | 1 | 81 | 1 | 76 | 9.15e-31 | 124 |
| MS.gene074159.t1 | AT3G01710 | 43.678 | 174 | 80 | 6 | 328 | 499 | 227 | 384 | 1.84e-28 | 117 |
| MS.gene074159.t1 | AT3G01710 | 71.951 | 82 | 16 | 2 | 1 | 81 | 1 | 76 | 1.09e-30 | 124 |
| MS.gene074159.t1 | AT3G01710 | 42.938 | 177 | 80 | 7 | 328 | 499 | 227 | 387 | 1.28e-26 | 112 |
| MS.gene074159.t1 | AT3G01710 | 71.951 | 82 | 16 | 2 | 1 | 81 | 1 | 76 | 1.69e-30 | 124 |
| MS.gene074159.t1 | AT3G01710 | 43.429 | 175 | 81 | 6 | 328 | 500 | 227 | 385 | 5.66e-29 | 119 |
| MS.gene074159.t1 | AT5G40700 | 63.415 | 82 | 29 | 1 | 1 | 81 | 1 | 82 | 2.90e-30 | 119 |
| MS.gene074159.t1 | AT5G40700 | 63.415 | 82 | 29 | 1 | 1 | 81 | 1 | 82 | 1.15e-29 | 119 |
| MS.gene074159.t1 | AT5G40700 | 63.415 | 82 | 29 | 1 | 1 | 81 | 1 | 82 | 1.18e-29 | 119 |
| MS.gene074159.t1 | AT3G26050 | 53.846 | 91 | 41 | 1 | 1 | 90 | 1 | 91 | 1.36e-25 | 111 |
| MS.gene074159.t1 | AT1G70100 | 43.636 | 110 | 56 | 2 | 14 | 117 | 9 | 118 | 9.73e-22 | 99.0 |
| MS.gene074159.t1 | AT1G70100 | 43.636 | 110 | 56 | 2 | 14 | 117 | 9 | 118 | 9.73e-22 | 99.0 |
| MS.gene074159.t1 | AT1G70100 | 43.636 | 110 | 56 | 2 | 14 | 117 | 9 | 118 | 9.73e-22 | 99.0 |
| MS.gene074159.t1 | AT1G70100 | 43.636 | 110 | 56 | 2 | 14 | 117 | 9 | 118 | 1.18e-21 | 99.0 |
| MS.gene074159.t1 | AT1G70100 | 29.167 | 240 | 133 | 8 | 14 | 235 | 9 | 229 | 1.31e-21 | 99.0 |
| MS.gene074159.t1 | AT1G70100 | 29.167 | 240 | 133 | 8 | 14 | 235 | 9 | 229 | 1.31e-21 | 99.0 |
| MS.gene074159.t1 | AT1G24160 | 34.703 | 219 | 107 | 10 | 25 | 236 | 30 | 219 | 3.28e-21 | 97.8 |
| MS.gene074159.t1 | AT1G24160 | 34.703 | 219 | 107 | 10 | 25 | 236 | 30 | 219 | 3.28e-21 | 97.8 |
| MS.gene074159.t1 | AT3G27350 | 73.214 | 56 | 15 | 0 | 40 | 95 | 1 | 56 | 3.52e-20 | 91.3 |
| MS.gene074159.t1 | AT1G70950 | 57.333 | 75 | 30 | 1 | 21 | 95 | 12 | 84 | 5.91e-17 | 84.3 |
| MS.gene074159.t1 | AT1G23060 | 30.594 | 219 | 142 | 5 | 33 | 247 | 22 | 234 | 1.12e-16 | 82.4 |
| MS.gene074159.t1 | AT1G23060 | 30.594 | 219 | 142 | 5 | 33 | 247 | 22 | 234 | 1.12e-16 | 82.4 |
Find 89 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTATTGCAGCAGGTTTC+TGG | 0.119202 | 6.1:-5754516 | MS.gene074159:intron |
| GGTGTAAAATTTACTTTCTT+TGG | 0.156449 | 6.1:+5754282 | None:intergenic |
| AGTAGCAAAGTTATCTATTT+TGG | 0.187455 | 6.1:+5754362 | None:intergenic |
| ATTTGTAATTTCTACCAATT+TGG | 0.200931 | 6.1:+5751819 | None:intergenic |
| TTCCTTTCCTTGTAAAATTC+AGG | 0.242565 | 6.1:+5752301 | None:intergenic |
| ATTCTTTGCAATGAAATTCT+TGG | 0.253032 | 6.1:+5751934 | None:intergenic |
| TTACTAATTGCAGGCTTCTA+AGG | 0.257175 | 6.1:-5753682 | MS.gene074159:intron |
| TGGTTCCTATGCTGAATATT+TGG | 0.291791 | 6.1:+5751839 | None:intergenic |
| CACTCTTTCATACTGAGAAT+TGG | 0.292122 | 6.1:+5752004 | None:intergenic |
| ATTGGATATCTTCCTTCATT+AGG | 0.299614 | 6.1:+5752022 | None:intergenic |
| ACCATACAGCCGGTCCTAAA+TGG | 0.300596 | 6.1:-5753462 | MS.gene074159:CDS |
| TGGCATTGGTCAAGAAGTTT+TGG | 0.301897 | 6.1:-5754496 | MS.gene074159:CDS |
| TCCAATCATGACACCAATAT+TGG | 0.308049 | 6.1:-5755137 | MS.gene074159:CDS |
| CCAGAGAGCAAGCGCCATTT+AGG | 0.310606 | 6.1:+5753448 | None:intergenic |
| AATCTATTAAATTCTCTAAT+AGG | 0.315430 | 6.1:+5754261 | None:intergenic |
| ATTGGTAGAAATTACAAATA+AGG | 0.320963 | 6.1:-5751815 | None:intergenic |
| CTGAAAGGCGATGATATAAT+TGG | 0.323544 | 6.1:+5752825 | None:intergenic |
| CATTACCTGATTGGAATCAT+TGG | 0.331909 | 6.1:+5756800 | None:intergenic |
| CCTAAATGGCGCTTGCTCTC+TGG | 0.336773 | 6.1:-5753448 | MS.gene074159:CDS |
| CTTGGACAATCAATCTCATT+TGG | 0.346035 | 6.1:-5755643 | MS.gene074159:CDS |
| TCCAATATTGGTGTCATGAT+TGG | 0.346836 | 6.1:+5755136 | None:intergenic |
| TTGCAGCAGGTTTCTGGCAT+TGG | 0.364934 | 6.1:-5754510 | MS.gene074159:intron |
| TCTTATTTGCAGGAGAAAAC+AGG | 0.368548 | 6.1:-5752379 | MS.gene074159:intron |
| TTCAAGTTGATAAAGTCTAA+TGG | 0.371163 | 6.1:-5754438 | MS.gene074159:CDS |
| ATTCCAGAAGCATAACAAAA+TGG | 0.379083 | 6.1:+5756825 | None:intergenic |
| CTCCATTAACAGAAAATAAC+AGG | 0.381810 | 6.1:-5753635 | MS.gene074159:intron |
| TTCTTCTGTGCAACTGAACC+TGG | 0.381974 | 6.1:+5755532 | None:intergenic |
| AAGAATTTCATTGCAAAGAA+TGG | 0.392366 | 6.1:-5751932 | MS.gene074159:CDS |
| ATTCAGCATAGGAACCAAAT+TGG | 0.393629 | 6.1:-5751833 | MS.gene074159:CDS |
| CAAGCTATCATTTGAAGCCT+TGG | 0.402368 | 6.1:+5754185 | None:intergenic |
| ATTAGACTTTATCAACTTGA+AGG | 0.414940 | 6.1:+5754440 | None:intergenic |
| AACATAATAACCTTCAATAT+CGG | 0.420064 | 6.1:+5754998 | None:intergenic |
| TAGCTTGGAAGCAAAAGCTT+TGG | 0.422621 | 6.1:+5752332 | None:intergenic |
| AGAAACTGAAATACCATAGT+TGG | 0.431426 | 6.1:+5754147 | None:intergenic |
| GCCATTTAGGACCGGCTGTA+TGG | 0.437996 | 6.1:+5753461 | None:intergenic |
| ATGGTAGCAGTAGATTTAAC+AGG | 0.438554 | 6.1:+5754390 | None:intergenic |
| AGAAGAATGTGAAGCACAAA+TGG | 0.439108 | 6.1:-5755263 | MS.gene074159:CDS |
| CTACTCCAATGAGCAACAAT+AGG | 0.440722 | 6.1:-5754344 | MS.gene074159:CDS |
| AGTCACTAGCATGGGAGAAA+TGG | 0.441400 | 6.1:-5755606 | MS.gene074159:CDS |
| GAAGGCCTATTGTTGCTCAT+TGG | 0.444492 | 6.1:+5754339 | None:intergenic |
| AAATTTACTTTCTTTGGAGT+TGG | 0.446539 | 6.1:+5754288 | None:intergenic |
| AGTTGGTGCTTCTTCTTCCA+AGG | 0.449272 | 6.1:-5754202 | MS.gene074159:CDS |
| AATTTCCAATGATTCCAATC+AGG | 0.452229 | 6.1:-5756805 | MS.gene074159:intron |
| TCCTTGTAAAATTCAGGTAG+TGG | 0.461475 | 6.1:+5752307 | None:intergenic |
| TTCAGTGAGGGTCTGTTAAG+AGG | 0.461582 | 6.1:+5751968 | None:intergenic |
| AATGAGCAACATTACCTGAT+TGG | 0.466587 | 6.1:+5756791 | None:intergenic |
| AGAGGATGATGTGCTAAGAT+AGG | 0.470185 | 6.1:+5751908 | None:intergenic |
| TCAGCTTGAGGACAGAAGAA+AGG | 0.475932 | 6.1:-5752806 | MS.gene074159:CDS |
| AATATCGGTGTCATGATTTG+AGG | 0.479371 | 6.1:+5755013 | None:intergenic |
| ATCAACTTGAAGGAAGAAAC+CGG | 0.484003 | 6.1:+5754450 | None:intergenic |
| AATCATGACACCGATATTGA+AGG | 0.486406 | 6.1:-5755008 | MS.gene074159:intron |
| CAGCTTGAGGACAGAAGAAA+GGG | 0.487619 | 6.1:-5752805 | MS.gene074159:CDS |
| GACAATCAATCTCATTTGGA+AGG | 0.493636 | 6.1:-5755639 | MS.gene074159:CDS |
| ATCAAATATTGAAACAAGAA+AGG | 0.496957 | 6.1:-5752275 | MS.gene074159:intron |
| TATCATCGCCTTTCAGCTTG+AGG | 0.505296 | 6.1:-5752818 | MS.gene074159:CDS |
| TTCATTGAATTTGAAGTCAG+AGG | 0.512230 | 6.1:+5751890 | None:intergenic |
| AGGTGTAGTAGTGGTGAACT+TGG | 0.518451 | 6.1:+5754410 | None:intergenic |
| ATTCAGGTAGTGGTCTAGCT+TGG | 0.521457 | 6.1:+5752317 | None:intergenic |
| AAGGGCTGCAAGAAGAAAGA+AGG | 0.536275 | 6.1:-5752787 | MS.gene074159:intron |
| CGCGAAGCAGACGAATCAAT+AGG | 0.537351 | 6.1:+5753487 | None:intergenic |
| GTCAAGGAAGAACAAGATGA+TGG | 0.543084 | 6.1:-5755352 | MS.gene074159:CDS |
| TGTAGTAGTGGTGAACTTGG+AGG | 0.544604 | 6.1:+5754413 | None:intergenic |
| CATCATGAATCACCTAATGA+AGG | 0.551374 | 6.1:-5752034 | MS.gene074159:CDS |
| AGGTTTGAAAATACAAGAGT+TGG | 0.557727 | 6.1:-5754219 | MS.gene074159:CDS |
| AATATTGGTGTCATGATTGG+AGG | 0.559272 | 6.1:+5755139 | None:intergenic |
| AACAATACAAATCATGCACT+TGG | 0.563437 | 6.1:-5755661 | MS.gene074159:CDS |
| TCTTCTGTCCTCAAGCTGAA+AGG | 0.565810 | 6.1:+5752810 | None:intergenic |
| TTTCGGCTTCTTCGACGTAA+CGG | 0.577418 | 6.1:+5755566 | None:intergenic |
| CTTATTTGCAGGAGAAAACA+GGG | 0.582152 | 6.1:-5752378 | MS.gene074159:intron |
| GAGCAAGCGCCATTTAGGAC+CGG | 0.582652 | 6.1:+5753453 | None:intergenic |
| GGAAGAACAAGATGATGGAA+AGG | 0.584651 | 6.1:-5755347 | MS.gene074159:CDS |
| CATGTCAGAGTCACTAGCAT+GGG | 0.586091 | 6.1:-5755614 | MS.gene074159:CDS |
| GAAAAGTTCAAAGGATGAAG+TGG | 0.587267 | 6.1:-5755377 | MS.gene074159:CDS |
| AAAGGATGAAGTGGTTGTCA+AGG | 0.590398 | 6.1:-5755368 | MS.gene074159:CDS |
| TCTGCATTGCTTAATGCAGA+AGG | 0.600195 | 6.1:+5754321 | None:intergenic |
| CATCACCAAATATTCAGCAT+AGG | 0.606535 | 6.1:-5751844 | MS.gene074159:CDS |
| AGATTTAACAGGTGTAGTAG+TGG | 0.607181 | 6.1:+5754401 | None:intergenic |
| GCTGCACAAAACAATGTCAA+TGG | 0.612316 | 6.1:-5755433 | MS.gene074159:CDS |
| GCTTCGCGTAACCATACAGC+CGG | 0.618836 | 6.1:-5753472 | MS.gene074159:CDS |
| GCCGAAAGGTATTCAAAACC+AGG | 0.618947 | 6.1:-5755550 | MS.gene074159:CDS |
| TGACTGCATCAGTGATGAGG+AGG | 0.620737 | 6.1:-5754239 | MS.gene074159:CDS |
| GATTGACTGCATCAGTGATG+AGG | 0.626131 | 6.1:-5754242 | MS.gene074159:CDS |
| TCATGTCAGAGTCACTAGCA+TGG | 0.633171 | 6.1:-5755615 | MS.gene074159:CDS |
| TGATTCGCAGAAAAGTTCAA+AGG | 0.636819 | 6.1:-5755386 | MS.gene074159:CDS |
| AACTAGCAAGAAGAAACCGC+CGG | 0.642813 | 6.1:-5754469 | MS.gene074159:CDS |
| GTTACGTCGAAGAAGCCGAA+AGG | 0.665024 | 6.1:-5755564 | MS.gene074159:CDS |
| TGTGAAGCACAAATGGAACA+AGG | 0.689546 | 6.1:-5755256 | MS.gene074159:CDS |
| GGTGATTCATGATGTGTCTG+CGG | 0.720627 | 6.1:+5752043 | None:intergenic |
| AACTTGAAGGAAGAAACCGG+CGG | 0.775901 | 6.1:+5754453 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTATGTTAATTTATTTTG+AGG | - | chr6.1:5753685-5753704 | MS.gene074159:intron | 10.0% |
| !! | AATCGAAATAAAACAAAATA+AGG | + | chr6.1:5753741-5753760 | None:intergenic | 15.0% |
| !! | AATCTATTAAATTCTCTAAT+AGG | + | chr6.1:5754411-5754430 | None:intergenic | 15.0% |
| !! | AATTGAAACTTATTAGATTA+AGG | - | chr6.1:5755361-5755380 | MS.gene074159:CDS | 15.0% |
| !! | ATCGAAATAAAACAAAATAA+GGG | + | chr6.1:5753740-5753759 | None:intergenic | 15.0% |
| !! | TAAGATTTGATTCAAAAAAT+AGG | - | chr6.1:5754851-5754870 | MS.gene074159:intron | 15.0% |
| !! | TCATGAAAAATTAACTAAAA+GGG | + | chr6.1:5752108-5752127 | None:intergenic | 15.0% |
| !! | TGAATTTGTATTGTTTAATT+TGG | - | chr6.1:5751915-5751934 | MS.gene074159:CDS | 15.0% |
| !! | TTCAATTATATAGTATTACA+TGG | - | chr6.1:5756530-5756549 | MS.gene074159:intron | 15.0% |
| !! | TTCATGAAAAATTAACTAAA+AGG | + | chr6.1:5752109-5752128 | None:intergenic | 15.0% |
| !! | TTTATGATGTTTAAAAACAT+TGG | - | chr6.1:5755498-5755517 | MS.gene074159:CDS | 15.0% |
| !!! | TATCATATTAATAGCTTTTT+TGG | - | chr6.1:5755426-5755445 | MS.gene074159:CDS | 15.0% |
| !!! | TATGTAAATTGATTTTTGTT+TGG | - | chr6.1:5752677-5752696 | MS.gene074159:intron | 15.0% |
| !!! | TATGTATTTTGTAAAATCAT+AGG | - | chr6.1:5755150-5755169 | MS.gene074159:CDS | 15.0% |
| !!! | TCTAAAAATATTTTGGATTT+TGG | - | chr6.1:5754650-5754669 | MS.gene074159:intron | 15.0% |
| !!! | TTTACCAATTTTTACTATTA+TGG | + | chr6.1:5756578-5756597 | None:intergenic | 15.0% |
| !!! | TTTAGAGTCTAAAAATATTT+TGG | - | chr6.1:5754643-5754662 | MS.gene074159:intron | 15.0% |
| !! | AACATAATAACCTTCAATAT+CGG | + | chr6.1:5753674-5753693 | None:intergenic | 20.0% |
| !! | AACTATACATGTTTGATTAA+TGG | + | chr6.1:5752345-5752364 | None:intergenic | 20.0% |
| !! | AATCGTGAATTTAAAAATGA+AGG | + | chr6.1:5753770-5753789 | None:intergenic | 20.0% |
| !! | ATCAAATATTGAAACAAGAA+AGG | - | chr6.1:5756394-5756413 | MS.gene074159:intron | 20.0% |
| !! | ATGATTGATTATGTTGTAAA+CGG | - | chr6.1:5752281-5752300 | MS.gene074159:CDS | 20.0% |
| !! | ATTTGTAATTTCTACCAATT+TGG | + | chr6.1:5756853-5756872 | None:intergenic | 20.0% |
| !! | CAATATGGTATGAATTAAAA+AGG | + | chr6.1:5755336-5755355 | None:intergenic | 20.0% |
| !! | CATAAGATACTAATAGTATA+AGG | + | chr6.1:5754568-5754587 | None:intergenic | 20.0% |
| !! | CATGAAAAATTAACTAAAAG+GGG | + | chr6.1:5752107-5752126 | None:intergenic | 20.0% |
| !! | TTAGTAACTTTGTAGAAATT+AGG | + | chr6.1:5755062-5755081 | None:intergenic | 20.0% |
| !! | TTATAGATGATTTATGAGTT+GGG | - | chr6.1:5752190-5752209 | MS.gene074159:intron | 20.0% |
| !! | TTCAAATGAAAAAAGAAAAG+TGG | + | chr6.1:5754751-5754770 | None:intergenic | 20.0% |
| !! | TTTAGATGAACTTTATCTTT+GGG | + | chr6.1:5755697-5755716 | None:intergenic | 20.0% |
| !! | TTTATAGATGATTTATGAGT+TGG | - | chr6.1:5752189-5752208 | MS.gene074159:intron | 20.0% |
| !!! | AAAAAAGACAAATACAGTTT+TGG | + | chr6.1:5754102-5754121 | None:intergenic | 20.0% |
| !!! | AAACCTTAAGATTTTGTTTT+GGG | - | chr6.1:5752895-5752914 | MS.gene074159:intron | 20.0% |
| !!! | AAGAATAGTTTAGAGTTTAA+TGG | - | chr6.1:5752365-5752384 | MS.gene074159:CDS | 20.0% |
| !!! | ACTGTATTTGTCTTTTTTTA+AGG | - | chr6.1:5754104-5754123 | MS.gene074159:intron | 20.0% |
| !!! | CATTTTTAAATTCACGATTT+CGG | - | chr6.1:5753771-5753790 | MS.gene074159:intron | 20.0% |
| !!! | CTTTTTAATTCATACCATAT+TGG | - | chr6.1:5755334-5755353 | MS.gene074159:CDS | 20.0% |
| !!! | GTTTTTCAAATTGGTAAATA+AGG | - | chr6.1:5756424-5756443 | MS.gene074159:intron | 20.0% |
| !!! | TAAACCTTAAGATTTTGTTT+TGG | - | chr6.1:5752894-5752913 | MS.gene074159:intron | 20.0% |
| !!! | TGCCATAATTTTCAAAATAT+GGG | - | chr6.1:5752080-5752099 | MS.gene074159:intron | 20.0% |
| !!! | TGTTTTAAGGAATTCATTAA+GGG | - | chr6.1:5753565-5753584 | MS.gene074159:intron | 20.0% |
| !!! | TTGCCATAATTTTCAAAATA+TGG | - | chr6.1:5752079-5752098 | MS.gene074159:intron | 20.0% |
| !!! | TTGTTTTAAGGAATTCATTA+AGG | - | chr6.1:5753564-5753583 | MS.gene074159:intron | 20.0% |
| !!! | TTTATTTTGAGGAATGTTTT+TGG | - | chr6.1:5753696-5753715 | MS.gene074159:intron | 20.0% |
| !!! | TTTTAGATGAACTTTATCTT+TGG | + | chr6.1:5755698-5755717 | None:intergenic | 20.0% |
| !!! | TTTTCATCATTTTTAGAAAC+TGG | - | chr6.1:5755984-5756003 | MS.gene074159:intron | 20.0% |
| ! | AAATACATAAACACAATGTC+AGG | + | chr6.1:5755139-5755158 | None:intergenic | 25.0% |
| ! | AAGAATTTCATTGCAAAGAA+TGG | - | chr6.1:5756737-5756756 | MS.gene074159:intron | 25.0% |
| ! | ACTTCATTTGTATCATGTAA+TGG | + | chr6.1:5752222-5752241 | None:intergenic | 25.0% |
| ! | AGTTTCAATTCTTTCCAATA+TGG | + | chr6.1:5755351-5755370 | None:intergenic | 25.0% |
| ! | ATATGATACAAGTGTATGTT+TGG | + | chr6.1:5752852-5752871 | None:intergenic | 25.0% |
| ! | ATTAGACTTTATCAACTTGA+AGG | + | chr6.1:5754232-5754251 | None:intergenic | 25.0% |
| ! | ATTCTTTGCAATGAAATTCT+TGG | + | chr6.1:5756738-5756757 | None:intergenic | 25.0% |
| ! | CTCAATAGTTCACATAAAAT+TGG | - | chr6.1:5752593-5752612 | MS.gene074159:intron | 25.0% |
| ! | CTTCTGTTTAATTGATTATG+AGG | - | chr6.1:5755929-5755948 | MS.gene074159:intron | 25.0% |
| ! | GAAACTTATTAGATTAAGGT+TGG | - | chr6.1:5755365-5755384 | MS.gene074159:CDS | 25.0% |
| ! | GGTGTAAAATTTACTTTCTT+TGG | + | chr6.1:5754390-5754409 | None:intergenic | 25.0% |
| ! | GTGTCCATAATAGTAAAAAT+TGG | - | chr6.1:5756571-5756590 | MS.gene074159:intron | 25.0% |
| ! | TAAACAGAAGAGAAACATAA+GGG | + | chr6.1:5755919-5755938 | None:intergenic | 25.0% |
| ! | TGAGACTAAATCAATTCTAT+AGG | - | chr6.1:5752717-5752736 | MS.gene074159:intron | 25.0% |
| ! | TTAAACAGAAGAGAAACATA+AGG | + | chr6.1:5755920-5755939 | None:intergenic | 25.0% |
| ! | TTGAAAATAACTGAATGTGT+CGG | + | chr6.1:5756515-5756534 | None:intergenic | 25.0% |
| !! | AGTAGCAAAGTTATCTATTT+TGG | + | chr6.1:5754310-5754329 | None:intergenic | 25.0% |
| !! | TATATAATGCTCTTATTTGC+AGG | - | chr6.1:5756280-5756299 | MS.gene074159:intron | 25.0% |
| !! | TCACTATGATGATTCATTTT+TGG | - | chr6.1:5754707-5754726 | MS.gene074159:intron | 25.0% |
| !! | TGATTCTAAAAGCTAGAATT+TGG | + | chr6.1:5752751-5752770 | None:intergenic | 25.0% |
| !! | TTTTGGATTAAATGCAGTTT+CGG | - | chr6.1:5753713-5753732 | MS.gene074159:intron | 25.0% |
| !!! | AAATTTACTTTCTTTGGAGT+TGG | + | chr6.1:5754384-5754403 | None:intergenic | 25.0% |
| !!! | ACAATTGCTTTTTCCAATAT+TGG | + | chr6.1:5753548-5753567 | None:intergenic | 25.0% |
| !!! | ACTAAAATAACTCACTTTTG+AGG | - | chr6.1:5751948-5751967 | MS.gene074159:CDS | 25.0% |
| !!! | ATAACTGTTACTTTACTTGA+AGG | - | chr6.1:5755756-5755775 | MS.gene074159:intron | 25.0% |
| !!! | GGTAATCTTGTTTTTCAAAT+TGG | - | chr6.1:5756415-5756434 | MS.gene074159:intron | 25.0% |
| !!! | GTCCCATATTTTGAAAATTA+TGG | + | chr6.1:5752085-5752104 | None:intergenic | 25.0% |
| !!! | GTTATCTATTTTGGAAGAAA+TGG | + | chr6.1:5754301-5754320 | None:intergenic | 25.0% |
| !!! | GTTTCATAGTTTTTTCAATG+TGG | + | chr6.1:5752973-5752992 | None:intergenic | 25.0% |
| !!! | TAACTGTTACTTTACTTGAA+GGG | - | chr6.1:5755757-5755776 | MS.gene074159:intron | 25.0% |
| !!! | TACCTGTTATTTTCTGTTAA+TGG | + | chr6.1:5755039-5755058 | None:intergenic | 25.0% |
| !!! | TGGAAAAAGCAATTGTTTTA+AGG | - | chr6.1:5753552-5753571 | MS.gene074159:intron | 25.0% |
| !!! | TGTTTTAAGGAATTCAATGA+TGG | - | chr6.1:5753439-5753458 | MS.gene074159:intron | 25.0% |
| !!! | TTCAAGTTGATAAAGTCTAA+TGG | - | chr6.1:5754231-5754250 | MS.gene074159:CDS | 25.0% |
| !!! | TTCACATAAAATTGGTTTTG+TGG | - | chr6.1:5752601-5752620 | MS.gene074159:intron | 25.0% |
| AAATGCATACACTAGGAAAA+TGG | + | chr6.1:5753820-5753839 | None:intergenic | 30.0% | |
| AAATTTGACTCATCGAAAAG+TGG | - | chr6.1:5752824-5752843 | MS.gene074159:CDS | 30.0% | |
| AACAATACAAATCATGCACT+TGG | - | chr6.1:5753008-5753027 | MS.gene074159:intron | 30.0% | |
| AATTTCCAATGATTCCAATC+AGG | - | chr6.1:5751864-5751883 | MS.gene074159:CDS | 30.0% | |
| ACACACGAATTACTCAATAT+TGG | + | chr6.1:5755307-5755326 | None:intergenic | 30.0% | |
| ACAGTTATTGTGTGTTTAAG+TGG | + | chr6.1:5755735-5755754 | None:intergenic | 30.0% | |
| ACTCCCAAAACAAAATCTTA+AGG | + | chr6.1:5752901-5752920 | None:intergenic | 30.0% | |
| AGAAACTGAAATACCATAGT+TGG | + | chr6.1:5754525-5754544 | None:intergenic | 30.0% | |
| AGGTTTGAAAATACAAGAGT+TGG | - | chr6.1:5754450-5754469 | MS.gene074159:CDS | 30.0% | |
| ATGAATCATCATAGTGAACA+AGG | + | chr6.1:5754704-5754723 | None:intergenic | 30.0% | |
| ATTGGATATCTTCCTTCATT+AGG | + | chr6.1:5756650-5756669 | None:intergenic | 30.0% | |
| CTCCATTAACAGAAAATAAC+AGG | - | chr6.1:5755034-5755053 | MS.gene074159:CDS | 30.0% | |
| GAAACACATATTAGTACACT+TGG | + | chr6.1:5755401-5755420 | None:intergenic | 30.0% | |
| GAATGATGCAAGATTGATTA+TGG | - | chr6.1:5752640-5752659 | MS.gene074159:CDS | 30.0% | |
| TCACAGAAACTAGACTTTAA+AGG | - | chr6.1:5756223-5756242 | MS.gene074159:intron | 30.0% | |
| TGATGGTTGAATTGCAAAAA+AGG | - | chr6.1:5753456-5753475 | MS.gene074159:CDS | 30.0% | |
| TTCCTTTCCTTGTAAAATTC+AGG | + | chr6.1:5756371-5756390 | None:intergenic | 30.0% | |
| ! | ATTCCAGAAGCATAACAAAA+TGG | + | chr6.1:5751847-5751866 | None:intergenic | 30.0% |
| ! | CAAACCTTGAATTTTTCATG+TGG | + | chr6.1:5756051-5756070 | None:intergenic | 30.0% |
| ! | TAAAAACATTGGCTAAAACG+TGG | - | chr6.1:5755509-5755528 | MS.gene074159:CDS | 30.0% |
| ! | TACCTGAATTTTACAAGGAA+AGG | - | chr6.1:5756366-5756385 | MS.gene074159:intron | 30.0% |
| ! | TGAAATTTTCAGTGTTAGAC+AGG | - | chr6.1:5755279-5755298 | MS.gene074159:CDS | 30.0% |
| ! | TTCATTGAATTTGAAGTCAG+AGG | + | chr6.1:5756782-5756801 | None:intergenic | 30.0% |
| !! | AAAACAGTTCAAAGAGTGTT+TGG | - | chr6.1:5755560-5755579 | MS.gene074159:CDS | 30.0% |
| !! | AACTGTTACTTTACTTGAAG+GGG | - | chr6.1:5755758-5755777 | MS.gene074159:intron | 30.0% |
| !! | ATACTTATGTGGCTTTAGAT+TGG | - | chr6.1:5753870-5753889 | MS.gene074159:intron | 30.0% |
| !! | GATGGTCAATATTTCAAGTT+CGG | + | chr6.1:5754006-5754025 | None:intergenic | 30.0% |
| !!! | GAGTCATTTTTACTAATTGC+AGG | - | chr6.1:5754978-5754997 | MS.gene074159:intron | 30.0% |
| !!! | GATTTTGTTTTGGGAGTATA+CGG | - | chr6.1:5752904-5752923 | MS.gene074159:intron | 30.0% |
| AATCATGACACCGATATTGA+AGG | - | chr6.1:5753661-5753680 | MS.gene074159:CDS | 35.0% | |
| AATGAGCAACATTACCTGAT+TGG | + | chr6.1:5751881-5751900 | None:intergenic | 35.0% | |
| ACACATATTAGTACACTTGG+TGG | + | chr6.1:5755398-5755417 | None:intergenic | 35.0% | |
| ACCAGACTAAGGACTAAATA+TGG | - | chr6.1:5756190-5756209 | MS.gene074159:intron | 35.0% | |
| AGAAGAATGTGAAGCACAAA+TGG | - | chr6.1:5753406-5753425 | MS.gene074159:intron | 35.0% | |
| AGATTTAACAGGTGTAGTAG+TGG | + | chr6.1:5754271-5754290 | None:intergenic | 35.0% | |
| ATCAACTTGAAGGAAGAAAC+CGG | + | chr6.1:5754222-5754241 | None:intergenic | 35.0% | |
| ATGGTAGCAGTAGATTTAAC+AGG | + | chr6.1:5754282-5754301 | None:intergenic | 35.0% | |
| ATTCAGCATAGGAACCAAAT+TGG | - | chr6.1:5756836-5756855 | MS.gene074159:CDS | 35.0% | |
| CACTCTTTCATACTGAGAAT+TGG | + | chr6.1:5756668-5756687 | None:intergenic | 35.0% | |
| CATCACCAAATATTCAGCAT+AGG | - | chr6.1:5756825-5756844 | MS.gene074159:CDS | 35.0% | |
| CATCATGAATCACCTAATGA+AGG | - | chr6.1:5756635-5756654 | MS.gene074159:intron | 35.0% | |
| CATTACCTGATTGGAATCAT+TGG | + | chr6.1:5751872-5751891 | None:intergenic | 35.0% | |
| CTGAAAGGCGATGATATAAT+TGG | + | chr6.1:5755847-5755866 | None:intergenic | 35.0% | |
| CTTATTTGCAGGAGAAAACA+GGG | - | chr6.1:5756291-5756310 | MS.gene074159:intron | 35.0% | |
| CTTGGACAATCAATCTCATT+TGG | - | chr6.1:5753026-5753045 | MS.gene074159:intron | 35.0% | |
| CTTGTTAAGTTAGTCCTACA+AGG | - | chr6.1:5756125-5756144 | MS.gene074159:intron | 35.0% | |
| GAAAAGTTCAAAGGATGAAG+TGG | - | chr6.1:5753292-5753311 | MS.gene074159:intron | 35.0% | |
| GACAATCAATCTCATTTGGA+AGG | - | chr6.1:5753030-5753049 | MS.gene074159:intron | 35.0% | |
| TAGAGAAAACTTGACACTGA+AGG | + | chr6.1:5755105-5755124 | None:intergenic | 35.0% | |
| TCAATGAGTGTCTTGTATTC+AGG | + | chr6.1:5752530-5752549 | None:intergenic | 35.0% | |
| TCCAATCATGACACCAATAT+TGG | - | chr6.1:5753532-5753551 | MS.gene074159:intron | 35.0% | |
| TCCATATTTAGTCCTTAGTC+TGG | + | chr6.1:5756194-5756213 | None:intergenic | 35.0% | |
| TCCTTGTAAAATTCAGGTAG+TGG | + | chr6.1:5756365-5756384 | None:intergenic | 35.0% | |
| TGATTCGCAGAAAAGTTCAA+AGG | - | chr6.1:5753283-5753302 | MS.gene074159:intron | 35.0% | |
| TGGTTCCTATGCTGAATATT+TGG | + | chr6.1:5756833-5756852 | None:intergenic | 35.0% | |
| TGTTTACAGCAATTGCAACT+TGG | + | chr6.1:5754948-5754967 | None:intergenic | 35.0% | |
| TTACTAATTGCAGGCTTCTA+AGG | - | chr6.1:5754987-5755006 | MS.gene074159:intron | 35.0% | |
| TTACTGAAATCACCAGACTA+AGG | - | chr6.1:5756179-5756198 | MS.gene074159:intron | 35.0% | |
| TTTCCTAGTGTATGCATTTG+AGG | - | chr6.1:5753821-5753840 | MS.gene074159:intron | 35.0% | |
| ! | ACAAGACACTCATTGATTGT+CGG | - | chr6.1:5752534-5752553 | MS.gene074159:intron | 35.0% |
| ! | ACCACTACCTGAATTTTACA+AGG | - | chr6.1:5756361-5756380 | MS.gene074159:intron | 35.0% |
| ! | TCCTCTAAAAACTCCAACTA+TGG | - | chr6.1:5754509-5754528 | MS.gene074159:intron | 35.0% |
| ! | TCTTATTTGCAGGAGAAAAC+AGG | - | chr6.1:5756290-5756309 | MS.gene074159:intron | 35.0% |
| !! | AATATCGGTGTCATGATTTG+AGG | + | chr6.1:5753659-5753678 | None:intergenic | 35.0% |
| !! | AATATTGGTGTCATGATTGG+AGG | + | chr6.1:5753533-5753552 | None:intergenic | 35.0% |
| !! | ACCATAGTTGGAGTTTTTAG+AGG | + | chr6.1:5754513-5754532 | None:intergenic | 35.0% |
| !! | AGTCTCTAAAATCACCTTGT+AGG | + | chr6.1:5756142-5756161 | None:intergenic | 35.0% |
| !! | CAACCATTTTGTTATGCTTC+TGG | - | chr6.1:5751841-5751860 | MS.gene074159:CDS | 35.0% |
| !! | TCCAATATTGGTGTCATGAT+TGG | + | chr6.1:5753536-5753555 | None:intergenic | 35.0% |
| !!! | ACCTGGTTTTGAATACCTTT+CGG | + | chr6.1:5753123-5753142 | None:intergenic | 35.0% |
| !!! | CTTGAAGGGGCTTTATTTTT+CGG | - | chr6.1:5755771-5755790 | MS.gene074159:intron | 35.0% |
| !!! | TGGAACAAGGTGTTGTTTTA+AGG | - | chr6.1:5753426-5753445 | MS.gene074159:intron | 35.0% |
| !!! | TTTTTTTAAGGTCATAGCCG+TGG | - | chr6.1:5754116-5754135 | MS.gene074159:intron | 35.0% |
| AAAGGATGAAGTGGTTGTCA+AGG | - | chr6.1:5753301-5753320 | MS.gene074159:intron | 40.0% | |
| AGACCCTCACTGAAAAACAA+TGG | - | chr6.1:5756710-5756729 | MS.gene074159:intron | 40.0% | |
| AGAGGATGATGTGCTAAGAT+AGG | + | chr6.1:5756764-5756783 | None:intergenic | 40.0% | |
| ATCTGTGACGACAGCATATA+AGG | - | chr6.1:5754075-5754094 | MS.gene074159:intron | 40.0% | |
| ATGTTGGTACTTATTGCAGC+AGG | - | chr6.1:5754146-5754165 | MS.gene074159:intron | 40.0% | |
| CAACCTCAAATGCATACACT+AGG | + | chr6.1:5753827-5753846 | None:intergenic | 40.0% | |
| CAGTCCAAAACTGAAGTTGA+AGG | + | chr6.1:5754921-5754940 | None:intergenic | 40.0% | |
| CATTCACACAGTCAACACAT+CGG | + | chr6.1:5754049-5754068 | None:intergenic | 40.0% | |
| CTACTCCAATGAGCAACAAT+AGG | - | chr6.1:5754325-5754344 | MS.gene074159:CDS | 40.0% | |
| GCAGCCACATGAAAAATTCA+AGG | - | chr6.1:5756044-5756063 | MS.gene074159:intron | 40.0% | |
| GCTGCACAAAACAATGTCAA+TGG | - | chr6.1:5753236-5753255 | MS.gene074159:intron | 40.0% | |
| GTCAAGGAAGAACAAGATGA+TGG | - | chr6.1:5753317-5753336 | MS.gene074159:intron | 40.0% | |
| GTCATTGGACTAAGATCAGA+TGG | + | chr6.1:5754024-5754043 | None:intergenic | 40.0% | |
| GTGTGAGTGAAGCTACAAAT+TGG | - | chr6.1:5755613-5755632 | MS.gene074159:CDS | 40.0% | |
| TACTTATTGCAGCAGGTTTC+TGG | - | chr6.1:5754153-5754172 | MS.gene074159:intron | 40.0% | |
| TAGCTTGGAAGCAAAAGCTT+TGG | + | chr6.1:5756340-5756359 | None:intergenic | 40.0% | |
| TCTGCATTGCTTAATGCAGA+AGG | + | chr6.1:5754351-5754370 | None:intergenic | 40.0% | |
| TGTGAAGCACAAATGGAACA+AGG | - | chr6.1:5753413-5753432 | MS.gene074159:intron | 40.0% | |
| ! | CAAGCTATCATTTGAAGCCT+TGG | + | chr6.1:5754487-5754506 | None:intergenic | 40.0% |
| ! | CAGTCCTTCAACTTCAGTTT+TGG | - | chr6.1:5754914-5754933 | MS.gene074159:intron | 40.0% |
| ! | CCACATAAGTATGTCGCTTA+CGG | + | chr6.1:5753862-5753881 | None:intergenic | 40.0% |
| !! | CATTGGCTAAAACGTGGTTT+TGG | - | chr6.1:5755515-5755534 | MS.gene074159:CDS | 40.0% |
| !! | GGAAGAACAAGATGATGGAA+AGG | - | chr6.1:5753322-5753341 | MS.gene074159:intron | 40.0% |
| !! | GTGCCATTGTTTTTCAGTGA+GGG | + | chr6.1:5756716-5756735 | None:intergenic | 40.0% |
| !!! | TGGCATTGGTCAAGAAGTTT+TGG | - | chr6.1:5754173-5754192 | MS.gene074159:CDS | 40.0% |
| AACTAGCAAGAAGAAACCGC+CGG | - | chr6.1:5754200-5754219 | MS.gene074159:CDS | 45.0% | |
| AACTTGAAGGAAGAAACCGG+CGG | + | chr6.1:5754219-5754238 | None:intergenic | 45.0% | |
| AAGGGCTGCAAGAAGAAAGA+AGG | - | chr6.1:5755882-5755901 | MS.gene074159:intron | 45.0% | |
| AGGTGTAGTAGTGGTGAACT+TGG | + | chr6.1:5754262-5754281 | None:intergenic | 45.0% | |
| AGTCACTAGCATGGGAGAAA+TGG | - | chr6.1:5753063-5753082 | MS.gene074159:intron | 45.0% | |
| ATTCCACTCAGTCAGCACAA+TGG | - | chr6.1:5753914-5753933 | MS.gene074159:intron | 45.0% | |
| CAGCTTGAGGACAGAAGAAA+GGG | - | chr6.1:5755864-5755883 | MS.gene074159:intron | 45.0% | |
| CATGTCAGAGTCACTAGCAT+GGG | - | chr6.1:5753055-5753074 | MS.gene074159:intron | 45.0% | |
| CCGTAAGCGACATACTTATG+TGG | - | chr6.1:5753859-5753878 | MS.gene074159:intron | 45.0% | |
| GAAGGCCTATTGTTGCTCAT+TGG | + | chr6.1:5754333-5754352 | None:intergenic | 45.0% | |
| GATTGACTGCATCAGTGATG+AGG | - | chr6.1:5754427-5754446 | MS.gene074159:CDS | 45.0% | |
| GGTGATTCATGATGTGTCTG+CGG | + | chr6.1:5756629-5756648 | None:intergenic | 45.0% | |
| GTACCAACATGTTAGTGCCA+CGG | + | chr6.1:5754136-5754155 | None:intergenic | 45.0% | |
| TATCATCGCCTTTCAGCTTG+AGG | - | chr6.1:5755851-5755870 | MS.gene074159:intron | 45.0% | |
| TCAGCTTGAGGACAGAAGAA+AGG | - | chr6.1:5755863-5755882 | MS.gene074159:intron | 45.0% | |
| TCATGTCAGAGTCACTAGCA+TGG | - | chr6.1:5753054-5753073 | MS.gene074159:intron | 45.0% | |
| TCTTCTGTCCTCAAGCTGAA+AGG | + | chr6.1:5755862-5755881 | None:intergenic | 45.0% | |
| TGTAGTAGTGGTGAACTTGG+AGG | + | chr6.1:5754259-5754278 | None:intergenic | 45.0% | |
| TTCAGTGAGGGTCTGTTAAG+AGG | + | chr6.1:5756704-5756723 | None:intergenic | 45.0% | |
| TTCTTCTGTGCAACTGAACC+TGG | + | chr6.1:5753140-5753159 | None:intergenic | 45.0% | |
| TTTCGGCTTCTTCGACGTAA+CGG | + | chr6.1:5753106-5753125 | None:intergenic | 45.0% | |
| ! | AGTTGGTGCTTCTTCTTCCA+AGG | - | chr6.1:5754467-5754486 | MS.gene074159:CDS | 45.0% |
| ! | ATTCAGGTAGTGGTCTAGCT+TGG | + | chr6.1:5756355-5756374 | None:intergenic | 45.0% |
| !! | ATGTGTCGGTGTTGTGTAAG+TGG | + | chr6.1:5756501-5756520 | None:intergenic | 45.0% |
| !! | GCCGAAAGGTATTCAAAACC+AGG | - | chr6.1:5753119-5753138 | MS.gene074159:intron | 45.0% |
| !! | GTGTTGACTGTGTGAATGTG+TGG | - | chr6.1:5754051-5754070 | MS.gene074159:intron | 45.0% |
| !!! | GGTGCCATTGTTTTTCAGTG+AGG | + | chr6.1:5756717-5756736 | None:intergenic | 45.0% |
| !! | AGAAATAAATATTTATAATT+TGG | - | chr6.1:5752025-5752044 | MS.gene074159:CDS | 5.0% |
| !!! | TTATATTTAATTATTGTTTT+TGG | - | chr6.1:5752318-5752337 | MS.gene074159:CDS | 5.0% |
| ACCATACAGCCGGTCCTAAA+TGG | - | chr6.1:5755207-5755226 | MS.gene074159:CDS | 50.0% | |
| CGCGAAGCAGACGAATCAAT+AGG | + | chr6.1:5755185-5755204 | None:intergenic | 50.0% | |
| CTTGAACCACGAGTCAGTGT+CGG | - | chr6.1:5756475-5756494 | MS.gene074159:intron | 50.0% | |
| GGCACACCTTTCGATAACTG+TGG | + | chr6.1:5753799-5753818 | None:intergenic | 50.0% | |
| GTCAACACATCGGTGGTCAT+TGG | + | chr6.1:5754039-5754058 | None:intergenic | 50.0% | |
| GTTACGTCGAAGAAGCCGAA+AGG | - | chr6.1:5753105-5753124 | MS.gene074159:intron | 50.0% | |
| TAGCCGTGGCACTAACATGT+TGG | - | chr6.1:5754130-5754149 | MS.gene074159:intron | 50.0% | |
| TCACACAGTCAACACATCGG+TGG | + | chr6.1:5754046-5754065 | None:intergenic | 50.0% | |
| TGACTGCATCAGTGATGAGG+AGG | - | chr6.1:5754430-5754449 | MS.gene074159:CDS | 50.0% | |
| ! | AGAGTGTTTGGAACCGCAGT+GGG | - | chr6.1:5755572-5755591 | MS.gene074159:CDS | 50.0% |
| !! | AAGAGTGTTTGGAACCGCAG+TGG | - | chr6.1:5755571-5755590 | MS.gene074159:CDS | 50.0% |
| !! | TCACCATTGTGCTGACTGAG+TGG | + | chr6.1:5753920-5753939 | None:intergenic | 50.0% |
| !! | TCGGTGCCACAGTTATCGAA+AGG | - | chr6.1:5753790-5753809 | MS.gene074159:intron | 50.0% |
| !! | TTGCAGCAGGTTTCTGGCAT+TGG | - | chr6.1:5754159-5754178 | MS.gene074159:intron | 50.0% |
| CCAGAGAGCAAGCGCCATTT+AGG | + | chr6.1:5755224-5755243 | None:intergenic | 55.0% | |
| CCTAAATGGCGCTTGCTCTC+TGG | - | chr6.1:5755221-5755240 | MS.gene074159:CDS | 55.0% | |
| GCTTCGCGTAACCATACAGC+CGG | - | chr6.1:5755197-5755216 | MS.gene074159:CDS | 55.0% | |
| GGTGACTGCTGTATCGCGAT+TGG | - | chr6.1:5753935-5753954 | MS.gene074159:intron | 55.0% | |
| GTAGCTTCACTCACACCACG+TGG | + | chr6.1:5755609-5755628 | None:intergenic | 55.0% | |
| ! | AGTGTTTGGAACCGCAGTGG+GGG | - | chr6.1:5755574-5755593 | MS.gene074159:CDS | 55.0% |
| ! | GAGCAAGCGCCATTTAGGAC+CGG | + | chr6.1:5755219-5755238 | None:intergenic | 55.0% |
| ! | GAGTGTTTGGAACCGCAGTG+GGG | - | chr6.1:5755573-5755592 | MS.gene074159:CDS | 55.0% |
| ! | GCCATTTAGGACCGGCTGTA+TGG | + | chr6.1:5755211-5755230 | None:intergenic | 55.0% |
| !! | AAGTGGCCGACACTGACTCG+TGG | + | chr6.1:5756484-5756503 | None:intergenic | 60.0% |
| TGGGGGATGCTCTCACCACG+TGG | - | chr6.1:5755591-5755610 | MS.gene074159:CDS | 65.0% | |
| !! | GGTGAGAGCATCCCCCACTG+CGG | + | chr6.1:5755588-5755607 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 5751817 | 5756874 | 5751817 | ID=MS.gene074159 |
| chr6.1 | mRNA | 5751817 | 5756874 | 5751817 | ID=MS.gene074159.t1;Parent=MS.gene074159 |
| chr6.1 | exon | 5756806 | 5756874 | 5756806 | ID=MS.gene074159.t1.exon1;Parent=MS.gene074159.t1 |
| chr6.1 | CDS | 5756806 | 5756874 | 5756806 | ID=cds.MS.gene074159.t1;Parent=MS.gene074159.t1 |
| chr6.1 | exon | 5755009 | 5755683 | 5755009 | ID=MS.gene074159.t1.exon2;Parent=MS.gene074159.t1 |
| chr6.1 | CDS | 5755009 | 5755683 | 5755009 | ID=cds.MS.gene074159.t1;Parent=MS.gene074159.t1 |
| chr6.1 | exon | 5754161 | 5754526 | 5754161 | ID=MS.gene074159.t1.exon3;Parent=MS.gene074159.t1 |
| chr6.1 | CDS | 5754161 | 5754526 | 5754161 | ID=cds.MS.gene074159.t1;Parent=MS.gene074159.t1 |
| chr6.1 | exon | 5753636 | 5753691 | 5753636 | ID=MS.gene074159.t1.exon4;Parent=MS.gene074159.t1 |
| chr6.1 | CDS | 5753636 | 5753691 | 5753636 | ID=cds.MS.gene074159.t1;Parent=MS.gene074159.t1 |
| chr6.1 | exon | 5753445 | 5753519 | 5753445 | ID=MS.gene074159.t1.exon5;Parent=MS.gene074159.t1 |
| chr6.1 | CDS | 5753445 | 5753519 | 5753445 | ID=cds.MS.gene074159.t1;Parent=MS.gene074159.t1 |
| chr6.1 | exon | 5752788 | 5752863 | 5752788 | ID=MS.gene074159.t1.exon6;Parent=MS.gene074159.t1 |
| chr6.1 | CDS | 5752788 | 5752863 | 5752788 | ID=cds.MS.gene074159.t1;Parent=MS.gene074159.t1 |
| chr6.1 | exon | 5752626 | 5752691 | 5752626 | ID=MS.gene074159.t1.exon7;Parent=MS.gene074159.t1 |
| chr6.1 | CDS | 5752626 | 5752691 | 5752626 | ID=cds.MS.gene074159.t1;Parent=MS.gene074159.t1 |
| chr6.1 | exon | 5752276 | 5752389 | 5752276 | ID=MS.gene074159.t1.exon8;Parent=MS.gene074159.t1 |
| chr6.1 | CDS | 5752276 | 5752389 | 5752276 | ID=cds.MS.gene074159.t1;Parent=MS.gene074159.t1 |
| chr6.1 | exon | 5751817 | 5752068 | 5751817 | ID=MS.gene074159.t1.exon9;Parent=MS.gene074159.t1 |
| chr6.1 | CDS | 5751817 | 5752068 | 5751817 | ID=cds.MS.gene074159.t1;Parent=MS.gene074159.t1 |
| Gene Sequence |
| Protein sequence |
