AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07426

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07426.t1 MTR_1g076710 99.412 340 2 0 1 340 1 340 0.0 685
MS.gene07426.t1 MTR_6g061670 53.216 342 113 13 1 325 1 312 1.12e-89 271
MS.gene07426.t1 MTR_6g061670 53.353 343 116 13 1 325 1 317 1.31e-89 271
MS.gene07426.t1 MTR_7g074935 49.107 336 124 11 1 310 1 315 2.65e-76 238
MS.gene07426.t1 MTR_4g101990 51.799 278 90 8 17 267 17 277 7.38e-63 203
MS.gene07426.t1 MTR_8g036160 41.096 365 133 9 1 310 1 338 7.09e-60 196
MS.gene07426.t1 MTR_1g061530 39.871 311 145 11 49 340 65 352 5.06e-50 171
MS.gene07426.t1 MTR_5g011680 42.254 284 121 9 14 264 3 276 2.25e-46 159
MS.gene07426.t1 MTR_8g031100 42.578 256 120 8 49 301 89 320 2.47e-43 152
MS.gene07426.t1 MTR_5g010330 43.363 226 104 7 37 261 59 261 1.87e-42 150
MS.gene07426.t1 MTR_7g077120 41.026 234 116 4 48 278 88 302 1.97e-42 150
MS.gene07426.t1 MTR_6g060670 42.534 221 95 5 46 266 117 305 5.88e-40 143
MS.gene07426.t1 MTR_5g011620 42.222 270 119 10 14 271 3 247 2.58e-38 145
MS.gene07426.t1 MTR_8g098390 39.035 228 121 5 48 274 96 306 6.49e-36 133
MS.gene07426.t1 MTR_4g098460 44.022 184 73 5 76 249 33 196 9.14e-32 120
MS.gene07426.t1 MTR_4g055803 40.865 208 93 7 48 248 59 243 1.19e-30 120
MS.gene07426.t1 MTR_5g011610 48.684 152 66 4 132 277 51 196 1.22e-30 119
MS.gene07426.t1 MTR_5g011610 53.465 101 43 2 126 225 204 301 4.31e-21 92.8
MS.gene07426.t1 MTR_4g055833 39.024 205 101 5 48 248 56 240 3.07e-30 118
MS.gene07426.t1 MTR_4g098460 42.857 189 73 6 76 249 33 201 2.76e-29 114
MS.gene07426.t1 MTR_1g038960 40.196 204 97 5 47 248 83 263 1.25e-27 110
MS.gene07426.t1 MTR_1g079780 50.427 117 53 3 134 248 109 222 1.39e-27 110
MS.gene07426.t1 MTR_7g116320 53.719 121 52 2 130 249 139 256 1.76e-27 110
MS.gene07426.t1 MTR_4g055813 49.254 134 60 3 117 248 6 133 2.41e-27 108
MS.gene07426.t1 MTR_7g116320 52.991 117 51 2 130 245 139 252 1.52e-25 103
MS.gene07426.t1 MTR_5g014360 37.379 206 95 7 52 248 123 303 1.12e-24 103
MS.gene07426.t1 MTR_3g100470 41.463 123 69 3 134 253 101 223 1.37e-23 99.0
MS.gene07426.t1 MTR_5g013390 33.636 220 116 7 47 260 79 274 7.17e-21 92.0
MS.gene07426.t1 MTR_4g055705 42.188 128 70 2 124 247 127 254 2.28e-20 90.1
MS.gene07426.t1 MTR_1g038990 34.314 204 92 6 47 248 80 243 1.88e-19 87.8
MS.gene07426.t1 MTR_3g116100 36.000 175 100 5 89 255 91 261 8.46e-19 86.3
MS.gene07426.t1 MTR_5g091630 38.172 186 89 6 69 249 23 187 1.03e-18 84.7
MS.gene07426.t1 MTR_5g041430 43.548 124 67 3 126 247 103 225 2.84e-18 84.3
MS.gene07426.t1 MTR_3g068035 43.966 116 61 2 134 248 106 218 1.45e-17 82.4
MS.gene07426.t1 MTR_5g066020 36.552 145 83 6 126 263 72 214 2.56e-17 80.9
MS.gene07426.t1 MTR_3g023560 38.843 121 67 2 132 248 60 177 3.76e-17 80.5
MS.gene07426.t1 MTR_5g011700 45.283 106 53 2 145 248 10 112 1.25e-16 77.4
MS.gene07426.t1 MTR_5g011520 37.654 162 81 4 88 248 97 239 3.30e-16 78.6
MS.gene07426.t1 MTR_7g080980 46.610 118 55 3 134 248 84 196 3.51e-16 77.8
MS.gene07426.t1 MTR_4g098450 44.068 118 58 3 134 248 103 215 1.36e-15 76.6
MS.gene07426.t1 MTR_1g044155 40.171 117 66 2 133 248 152 265 1.42e-15 77.0
MS.gene07426.t1 MTR_8g036060 37.736 159 79 4 91 248 86 225 1.58e-15 76.6
MS.gene07426.t1 MTR_5g080580 42.241 116 63 2 134 248 116 228 1.22e-14 74.3
MS.gene07426.t1 MTR_1g073860 38.793 116 67 2 134 248 121 233 9.37e-14 71.6
MS.gene07426.t1 MTR_1g079810 40.517 116 65 2 134 248 101 213 4.08e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07426.t1 AT4G25320 67.925 212 58 5 48 256 85 289 1.86e-84 261
MS.gene07426.t1 AT5G62260 64.545 220 64 7 49 261 76 288 1.63e-83 259
MS.gene07426.t1 AT5G62260 64.545 220 64 7 49 261 76 288 1.63e-83 259
MS.gene07426.t1 AT5G62260 62.150 214 67 7 49 255 76 282 4.34e-77 238
MS.gene07426.t1 AT4G12080 58.051 236 73 7 48 271 88 309 1.57e-75 236
MS.gene07426.t1 AT5G51590 59.016 244 63 6 34 251 64 296 2.98e-71 228
MS.gene07426.t1 AT4G22770 56.195 226 80 7 48 267 71 283 1.28e-58 192
MS.gene07426.t1 AT4G22770 56.195 226 80 7 48 267 71 283 1.28e-58 192
MS.gene07426.t1 AT4G00200 53.817 262 91 8 15 265 14 256 1.65e-56 186
MS.gene07426.t1 AT4G00200 53.817 262 91 8 15 265 14 256 1.65e-56 186
MS.gene07426.t1 AT2G33620 53.589 209 67 6 48 250 96 280 1.14e-52 177
MS.gene07426.t1 AT2G33620 53.589 209 67 6 48 250 96 280 1.14e-52 177
MS.gene07426.t1 AT2G33620 53.589 209 67 6 48 250 96 280 1.14e-52 177
MS.gene07426.t1 AT2G33620 53.589 209 67 6 48 250 96 280 1.14e-52 177
MS.gene07426.t1 AT2G45850 37.544 285 149 5 7 288 56 314 7.89e-45 157
MS.gene07426.t1 AT2G45850 37.544 285 149 5 7 288 56 314 7.89e-45 157
MS.gene07426.t1 AT1G63470 45.933 209 90 5 48 251 104 294 5.45e-44 155
MS.gene07426.t1 AT2G45850 40.000 240 118 4 7 243 56 272 9.26e-41 144
MS.gene07426.t1 AT4G17950 37.868 272 112 9 48 292 130 371 2.23e-39 144
MS.gene07426.t1 AT3G61310 46.377 207 86 6 45 249 97 280 2.60e-39 142
MS.gene07426.t1 AT5G46640 43.119 218 92 5 45 249 98 296 1.98e-37 138
MS.gene07426.t1 AT1G63480 40.385 208 92 6 48 251 98 277 8.19e-35 130
MS.gene07426.t1 AT1G63480 40.385 208 92 6 48 251 98 277 8.19e-35 130
MS.gene07426.t1 AT1G63480 40.385 208 92 6 48 251 92 271 9.18e-35 130
MS.gene07426.t1 AT1G63480 40.385 208 92 6 48 251 92 271 9.18e-35 130
MS.gene07426.t1 AT1G63480 40.385 208 92 6 48 251 92 271 9.18e-35 130
MS.gene07426.t1 AT1G63480 40.385 208 92 6 48 251 92 271 9.18e-35 130
MS.gene07426.t1 AT1G63480 40.385 208 92 6 48 251 92 271 9.18e-35 130
MS.gene07426.t1 AT3G04590 39.207 227 108 6 30 248 79 283 9.04e-33 124
MS.gene07426.t1 AT3G04590 39.207 227 108 6 30 248 79 283 5.63e-32 124
MS.gene07426.t1 AT2G36560 43.704 135 70 4 131 262 102 233 6.18e-24 102
MS.gene07426.t1 AT5G49700 37.778 135 78 4 134 262 83 217 2.84e-20 89.4
MS.gene07426.t1 AT2G42940 38.983 177 79 7 76 249 43 193 1.03e-18 84.7
MS.gene07426.t1 AT1G14490 37.500 144 83 5 126 262 41 184 1.42e-17 80.9
MS.gene07426.t1 AT1G14490 37.500 144 83 5 126 262 22 165 1.45e-17 80.5
MS.gene07426.t1 AT3G60870 40.517 116 63 3 134 248 86 196 3.68e-17 80.5
MS.gene07426.t1 AT4G14465 43.103 116 62 2 134 248 94 206 4.26e-16 77.8
MS.gene07426.t1 AT2G35270 39.130 161 74 5 91 248 78 217 9.07e-16 77.0
MS.gene07426.t1 AT3G55560 41.026 117 66 2 134 249 115 229 1.89e-14 73.6
MS.gene07426.t1 AT1G76500 35.200 125 68 3 134 248 99 220 1.59e-13 70.5
MS.gene07426.t1 AT4G17800 41.228 114 63 2 136 248 111 221 1.77e-13 70.5
MS.gene07426.t1 AT3G04570 38.710 124 64 3 134 248 107 227 2.29e-12 67.4
MS.gene07426.t1 AT5G28590 37.398 123 46 3 130 248 26 121 2.32e-12 65.9
MS.gene07426.t1 AT4G12050 40.171 117 65 3 134 248 145 258 9.11e-12 65.9
MS.gene07426.t1 AT4G22810 32.716 162 86 5 91 248 105 247 1.24e-11 65.1
MS.gene07426.t1 AT2G45430 34.969 163 82 5 91 248 89 232 1.66e-11 64.7
MS.gene07426.t1 AT4G35390 41.176 119 62 4 134 248 90 204 1.72e-11 64.7

Find 93 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGAAGAAAGAGAGAATTT+TGG 0.289936 1.2:-63779853 MS.gene07426:CDS
CTTCGTCAATCGACTTCTTC+AGG 0.300773 1.2:-63776737 MS.gene07426:CDS
CCACCCAATACTCGGCCATC+TGG 0.308208 1.2:+63776328 None:intergenic
TCCATTCTCAGTTGGCATAA+AGG 0.318075 1.2:+63776396 None:intergenic
AACGGTGCCGGTGTCGTTGC+CGG 0.338330 1.2:-63779743 MS.gene07426:CDS
GGCCCAGATGGCCGAGTATT+GGG 0.346491 1.2:-63776331 MS.gene07426:CDS
TTTGAGATTCTTTCCTTGTC+TGG 0.357599 1.2:-63776421 MS.gene07426:CDS
AATGCAGCAGGTGTCATAAA+AGG 0.358990 1.2:+63776020 None:intergenic
TATGTGCTTACAGTGAATTC+TGG 0.363275 1.2:-63777020 MS.gene07426:CDS
TCCTTTATGCCAACTGAGAA+TGG 0.367271 1.2:-63776397 MS.gene07426:CDS
TGGTGGGATGAGTGTCTCTT+TGG 0.369450 1.2:-63776356 MS.gene07426:CDS
AGGCCCAGATGGCCGAGTAT+TGG 0.385737 1.2:-63776332 MS.gene07426:CDS
CTTGTAATTCCATTCTCAGT+TGG 0.403549 1.2:+63776388 None:intergenic
GAGAGTTCTCAGCTTGGAAA+AGG 0.409824 1.2:-63779600 MS.gene07426:CDS
CCATCTGGACCATACTTCCT+TGG 0.412247 1.2:+63779691 None:intergenic
GTCTCTTTGGCAGGCCCAGA+TGG 0.415568 1.2:-63776343 MS.gene07426:CDS
CAGAGATCCTTTACCTGAAA+AGG 0.415604 1.2:-63775928 MS.gene07426:CDS
GAAAGCGCAGTCACAGCTCC+AGG 0.416976 1.2:+63779658 None:intergenic
GCTGGTTTGCTTATAGCTTC+CGG 0.419761 1.2:-63776298 MS.gene07426:CDS
TCCAAGTTGTTATCAATCCT+TGG 0.429223 1.2:+63779778 None:intergenic
TTCTTCTTCAAAGCTGTCTC+CGG 0.437794 1.2:+63779724 None:intergenic
AACGGAATCGACGATGAAAT+CGG 0.441018 1.2:+63779628 None:intergenic
GATTTCTTCATAGATTCAAC+AGG 0.446009 1.2:+63779565 None:intergenic
TTCGTCAATCGACTTCTTCA+GGG 0.447507 1.2:-63776736 MS.gene07426:CDS
AGGGGAAGACCAAGGAAGTA+TGG 0.459354 1.2:-63779700 MS.gene07426:CDS
TGCATTCATTAGGTCGTTGT+GGG 0.460179 1.2:-63776185 MS.gene07426:intron
GGAATTACAAGAAGCAGATC+TGG 0.463594 1.2:-63776376 MS.gene07426:CDS
TATTGCACGTGATCCTTGTT+GGG 0.468137 1.2:+63776799 None:intergenic
CCAGGAGCAGGCTTACCATC+TGG 0.469400 1.2:+63779676 None:intergenic
TTCTCTTCTTGAAATGCAGC+AGG 0.470365 1.2:+63776008 None:intergenic
ATATTGCACGTGATCCTTGT+TGG 0.472595 1.2:+63776798 None:intergenic
CACCCAATACTCGGCCATCT+GGG 0.474541 1.2:+63776329 None:intergenic
GCAGTCACAGCTCCAGGAGC+AGG 0.477303 1.2:+63779664 None:intergenic
GTGTCTAATGAAGTAAGTTT+CGG 0.481593 1.2:-63776053 MS.gene07426:CDS
GTATTGGGTGGTGGACTCGC+TGG 0.482204 1.2:-63776316 MS.gene07426:CDS
CGACACCGGCACCGTTGCCA+TGG 0.488569 1.2:+63779750 None:intergenic
GGGATGAGTGTCTCTTTGGC+AGG 0.488739 1.2:-63776352 MS.gene07426:CDS
TAAACTCACCTCATACGTTA+AGG 0.491146 1.2:+63776709 None:intergenic
TCATCGTCGATTCCGTTGAC+TGG 0.493414 1.2:-63779622 MS.gene07426:CDS
TTTGGTGCTGTGAATGTAGT+GGG 0.499641 1.2:-63779835 MS.gene07426:CDS
CCAGATGGTAAGCCTGCTCC+TGG 0.499803 1.2:-63779676 MS.gene07426:CDS
CGAGTCCACCACCCAATACT+CGG 0.505760 1.2:+63776320 None:intergenic
AGCAAAACAGCAAGAAGCAG+AGG 0.510263 1.2:-63776136 MS.gene07426:CDS
AGAGTTTACCTGCACGGGAC+CGG 0.519678 1.2:+63776279 None:intergenic
ATCTCTGTCTTCAGCAGATG+AGG 0.527702 1.2:+63775944 None:intergenic
ACAACAATGCTCAAGACTCT+AGG 0.534120 1.2:-63775971 MS.gene07426:CDS
AGAGTTCTCAGCTTGGAAAA+GGG 0.534719 1.2:-63779599 MS.gene07426:CDS
TATAGCTTCCGGTCCCGTGC+AGG 0.538508 1.2:-63776287 MS.gene07426:intron
ATATGTATTCTCTCTGCCAC+TGG 0.538679 1.2:-63776779 MS.gene07426:CDS
GATGGCCGAGTATTGGGTGG+TGG 0.550417 1.2:-63776325 MS.gene07426:CDS
GTGCATTCATTAGGTCGTTG+TGG 0.552620 1.2:-63776186 MS.gene07426:intron
TCAGCTTGGAAAAGGGGTAG+AGG 0.552867 1.2:-63779592 MS.gene07426:CDS
GAGTTCTCAGCTTGGAAAAG+GGG 0.553297 1.2:-63779598 MS.gene07426:CDS
TCCAAGGATTGATAACAACT+TGG 0.557972 1.2:-63779779 MS.gene07426:CDS
GCTGTCTCCGGCAACGACAC+CGG 0.564357 1.2:+63779736 None:intergenic
ACTCCAGAGTTTACCTGCAC+GGG 0.565877 1.2:+63776274 None:intergenic
TGATGATTAACATGCGGAGG+AGG 0.567490 1.2:+63776077 None:intergenic
AGACAGCTTTGAAGAAGAAG+AGG 0.569402 1.2:-63779720 MS.gene07426:CDS
TGAGCTTTCAAGCTGCTCCA+AGG 0.570496 1.2:-63779795 MS.gene07426:CDS
GACAGCTTTGAAGAAGAAGA+GGG 0.570605 1.2:-63779719 MS.gene07426:CDS
AAGCACATAAGCTGTGAAGT+TGG 0.573504 1.2:+63777034 None:intergenic
CCAAGGAAGTATGGTCCAGA+TGG 0.574476 1.2:-63779691 MS.gene07426:CDS
GAGGGAATTGCATACTCAGT+AGG 0.575333 1.2:-63777059 MS.gene07426:CDS
GTAGGTGGAGGTGTAAGTGA+GGG 0.576701 1.2:-63777077 MS.gene07426:CDS
TACTCCAGAGTTTACCTGCA+CGG 0.581270 1.2:+63776273 None:intergenic
TGTAGGTGGAGGTGTAAGTG+AGG 0.583447 1.2:-63777078 MS.gene07426:CDS
TAAATAATACCTTGCACAGG+TGG 0.587655 1.2:+63779517 None:intergenic
CAGCTTGGAAAAGGGGTAGA+GGG 0.590560 1.2:-63779591 MS.gene07426:CDS
TTTGAAAGTCCACCTGTGCA+AGG 0.595210 1.2:-63779526 MS.gene07426:intron
GCTGAGAACTCTCCAGTCAA+CGG 0.597272 1.2:+63779610 None:intergenic
GGAGCAGCTTGAAAGCTCAC+AGG 0.597686 1.2:+63779799 None:intergenic
AAACAGCAAGAAGCAGAGGG+TGG 0.602793 1.2:-63776132 MS.gene07426:CDS
GAATGTAGTGGGTGGTAATG+AGG 0.604474 1.2:-63779824 MS.gene07426:CDS
TGGCATAAAGGAACCAGACA+AGG 0.611075 1.2:+63776408 None:intergenic
TCGTCAATCGACTTCTTCAG+GGG 0.612115 1.2:-63776735 MS.gene07426:CDS
AAAATTATGTCCTCCCAACA+AGG 0.612526 1.2:-63776812 MS.gene07426:CDS
TGACTGGAGAGTTCTCAGCT+TGG 0.612765 1.2:-63779606 MS.gene07426:CDS
TGCACGTGATCCTTGTTGGG+AGG 0.616462 1.2:+63776802 None:intergenic
CTATAAATAATACCTTGCAC+AGG 0.617295 1.2:+63779514 None:intergenic
TCTAATGAAGTAAGTTTCGG+TGG 0.620980 1.2:-63776050 MS.gene07426:CDS
ATTACAAGAAGCAGATCTGG+TGG 0.630094 1.2:-63776373 MS.gene07426:CDS
GCAAAACAGCAAGAAGCAGA+GGG 0.637562 1.2:-63776135 MS.gene07426:CDS
AACATTTGAAATTGTGCCAG+TGG 0.637698 1.2:+63776763 None:intergenic
CCAGATGGCCGAGTATTGGG+TGG 0.641351 1.2:-63776328 MS.gene07426:CDS
GGTGCTGTGAATGTAGTGGG+TGG 0.656148 1.2:-63779832 MS.gene07426:CDS
ATCGACGATGAAATCGGCAT+AGG 0.666533 1.2:+63779634 None:intergenic
TTACAAGAAGCAGATCTGGT+GGG 0.675023 1.2:-63776372 MS.gene07426:CDS
GACACATGATGATTAACATG+CGG 0.679694 1.2:+63776071 None:intergenic
AGAAGAAGAGGGGAAGACCA+AGG 0.680559 1.2:-63779708 MS.gene07426:CDS
ACATGATGATTAACATGCGG+AGG 0.682437 1.2:+63776074 None:intergenic
GCTTACAGTGAATTCTGGCG+AGG 0.694276 1.2:-63777015 MS.gene07426:intron
ACAGCTTTGAAGAAGAAGAG+GGG 0.698390 1.2:-63779718 MS.gene07426:CDS
CGTCAATCGACTTCTTCAGG+GGG 0.699414 1.2:-63776734 MS.gene07426:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTATTTTTATATTTAAT+GGG - chr1.2:63778506-63778525 MS.gene07426:intron 0.0%
!!! TATTTTATTTTTATATTTAA+TGG - chr1.2:63778505-63778524 MS.gene07426:intron 0.0%
!! ATGAAAATTATAAGAAAAAA+AGG + chr1.2:63776323-63776342 None:intergenic 10.0%
!! TTAAGTATTATGTAAATTAT+TGG + chr1.2:63777465-63777484 None:intergenic 10.0%
!! ACCATATAAAATATGATAAA+AGG + chr1.2:63778777-63778796 None:intergenic 15.0%
!! ATAAAATATGATAAAAGGAA+AGG + chr1.2:63778772-63778791 None:intergenic 15.0%
!! ATTAAGAACAAGTTAAAATT+TGG + chr1.2:63776982-63777001 None:intergenic 15.0%
!! GAATGTTAAAAAAAAAACAA+AGG + chr1.2:63777292-63777311 None:intergenic 15.0%
!!! TAGTTTTTGAATTTCATTTT+TGG - chr1.2:63778855-63778874 MS.gene07426:intron 15.0%
!!! TCCTTTTATCATATTTTATA+TGG - chr1.2:63778773-63778792 MS.gene07426:intron 15.0%
!!! TTATCATATTTTATATGGTA+TGG - chr1.2:63778778-63778797 MS.gene07426:intron 15.0%
!!! TTTATTTTTGTGAACTATAA+AGG - chr1.2:63778563-63778582 MS.gene07426:intron 15.0%
!! AACTACATAAAATACGTATA+AGG + chr1.2:63778655-63778674 None:intergenic 20.0%
!! TAATAACTATGCCAAAAAAA+TGG + chr1.2:63777325-63777344 None:intergenic 20.0%
!! TATGTTGAAAAAATAACAAG+AGG + chr1.2:63776469-63776488 None:intergenic 20.0%
!! TCTTCTTATAAAGGAAAATA+AGG + chr1.2:63776750-63776769 None:intergenic 20.0%
!! TGTGATAGAGTTTATATTTA+GGG - chr1.2:63776596-63776615 MS.gene07426:intron 20.0%
!! TTGTGATAGAGTTTATATTT+AGG - chr1.2:63776595-63776614 MS.gene07426:intron 20.0%
!!! ATTTTTTTGTCTTAATCATC+GGG + chr1.2:63777039-63777058 None:intergenic 20.0%
!!! CATTTTTTTGTCTTAATCAT+CGG + chr1.2:63777040-63777059 None:intergenic 20.0%
!!! CTTTTATATAATGAATGAAC+TGG - chr1.2:63778532-63778551 MS.gene07426:intron 20.0%
!!! GTAAAGAATCTTCTAAAATT+AGG - chr1.2:63778207-63778226 MS.gene07426:intron 20.0%
!!! TACTTTTCTTCTTCTTATAA+AGG + chr1.2:63776759-63776778 None:intergenic 20.0%
!!! TTTTAACTTGTTCTTAATCA+TGG - chr1.2:63776984-63777003 MS.gene07426:intron 20.0%
!!! TTTTTGAGTTCTAATTGTTA+TGG - chr1.2:63776519-63776538 MS.gene07426:intron 20.0%
! AAATGGTTAGAGTAAATGAA+GGG - chr1.2:63776798-63776817 MS.gene07426:CDS 25.0%
! AACACAATTATTTATGGACT+CGG - chr1.2:63778055-63778074 MS.gene07426:intron 25.0%
! AGAGATTTATAGAACGTATT+AGG - chr1.2:63777197-63777216 MS.gene07426:intron 25.0%
! AGTATTGCATTATATGACAA+TGG - chr1.2:63776775-63776794 MS.gene07426:CDS 25.0%
! AGTGGAATTCATTATTATTC+AGG - chr1.2:63776407-63776426 MS.gene07426:CDS 25.0%
! ATGTTGCAAGATAAAGAAAA+GGG + chr1.2:63777831-63777850 None:intergenic 25.0%
! ATTAAATACATGAATTGAGC+TGG - chr1.2:63778300-63778319 MS.gene07426:intron 25.0%
! CAAAGATCATTACTTAATAC+TGG - chr1.2:63777796-63777815 MS.gene07426:intron 25.0%
! CTAAAAGTTTCAGAAAAATG+TGG + chr1.2:63777671-63777690 None:intergenic 25.0%
! CTAAAATTAGGACCATAATA+GGG - chr1.2:63778219-63778238 MS.gene07426:intron 25.0%
! GGTTCTTTAATTGTTTAAGA+GGG - chr1.2:63777976-63777995 MS.gene07426:intron 25.0%
! GTATGGAACACAATTATTTA+TGG - chr1.2:63778049-63778068 MS.gene07426:intron 25.0%
! GTGATAGAGTTTATATTTAG+GGG - chr1.2:63776597-63776616 MS.gene07426:intron 25.0%
! TAATTGTGTTCCATACTTTA+CGG + chr1.2:63778045-63778064 None:intergenic 25.0%
! TCTTCTTGTAAAAAATAGAG+TGG - chr1.2:63777063-63777082 MS.gene07426:CDS 25.0%
! TGATAGAGTTTATATTTAGG+GGG - chr1.2:63776598-63776617 MS.gene07426:intron 25.0%
! TTCAGAAAAATGTGGTATTA+GGG + chr1.2:63777663-63777682 None:intergenic 25.0%
! TTTCAGAAAAATGTGGTATT+AGG + chr1.2:63777664-63777683 None:intergenic 25.0%
! TTTCTATTATTGAAGTCTCT+TGG - chr1.2:63778392-63778411 MS.gene07426:intron 25.0%
!! CATTTGTTTCTCTATCATAT+TGG - chr1.2:63779102-63779121 MS.gene07426:intron 25.0%
!! GTAATAAAGAAATTCTAGAG+AGG + chr1.2:63778594-63778613 None:intergenic 25.0%
!! TACGTATTTTATGTAGTTGT+AGG - chr1.2:63778657-63778676 MS.gene07426:intron 25.0%
!! TCTAAAATTAGGACCATAAT+AGG - chr1.2:63778218-63778237 MS.gene07426:intron 25.0%
!! TCTTTGAAGGTTATGAATTA+AGG - chr1.2:63778010-63778029 MS.gene07426:intron 25.0%
!!! GGTTTTATTCGTCTAATATT+GGG + chr1.2:63777631-63777650 None:intergenic 25.0%
!!! TCCATCAGTATTTTAATCAA+AGG - chr1.2:63777104-63777123 MS.gene07426:intron 25.0%
!!! TGTTTGTTTTACGAGTTTTT+TGG + chr1.2:63777553-63777572 None:intergenic 25.0%
!!! TTGAAGTAAATTATTGACTC+TGG - chr1.2:63778828-63778847 MS.gene07426:intron 25.0%
!!! TTTTGGTTGCATATAGTATA+AGG - chr1.2:63777161-63777180 MS.gene07426:intron 25.0%
AACAATACATGGCAGTAAAT+TGG + chr1.2:63778248-63778267 None:intergenic 30.0%
ACTATTAGACTCATTCTAGT+TGG + chr1.2:63776825-63776844 None:intergenic 30.0%
AGGTTGTATTTGTTCTGTTT+AGG - chr1.2:63776709-63776728 MS.gene07426:intron 30.0%
ATTATTAAGAGCAATCTCCT+AGG - chr1.2:63777011-63777030 MS.gene07426:intron 30.0%
ATTATTCAAACCAACCAACA+AGG + chr1.2:63776924-63776943 None:intergenic 30.0%
CATATAAACGAAGGACTTTA+TGG + chr1.2:63779136-63779155 None:intergenic 30.0%
CATATAATACAAGACAGACA+TGG + chr1.2:63779162-63779181 None:intergenic 30.0%
CATATAGTATAAGGTATGCT+TGG - chr1.2:63777170-63777189 MS.gene07426:intron 30.0%
CTATAAATAATACCTTGCAC+AGG + chr1.2:63776241-63776260 None:intergenic 30.0%
CTCTGAATATAGCATGTTTA+GGG + chr1.2:63777379-63777398 None:intergenic 30.0%
CTTTAATTGTTTAAGAGGGT+TGG - chr1.2:63777980-63777999 MS.gene07426:intron 30.0%
CTTTGTATTCAGATCTGAAA+AGG + chr1.2:63776652-63776671 None:intergenic 30.0%
GAAATGGTTAGAGTAAATGA+AGG - chr1.2:63776797-63776816 MS.gene07426:CDS 30.0%
GAAGAAGCTTATGTATCATT+CGG + chr1.2:63778471-63778490 None:intergenic 30.0%
GATGTTGCAAGATAAAGAAA+AGG + chr1.2:63777832-63777851 None:intergenic 30.0%
GATTTCTTCATAGATTCAAC+AGG + chr1.2:63776190-63776209 None:intergenic 30.0%
GCATTATATGACAATGGAAA+TGG - chr1.2:63776781-63776800 MS.gene07426:CDS 30.0%
GCCTTTGATTAAAATACTGA+TGG + chr1.2:63777108-63777127 None:intergenic 30.0%
GGAGTTAAGACTTTCAAATA+TGG - chr1.2:63778321-63778340 MS.gene07426:intron 30.0%
GGGTTCTTTAATTGTTTAAG+AGG - chr1.2:63777975-63777994 MS.gene07426:intron 30.0%
GGTTGTATTTGTTCTGTTTA+GGG - chr1.2:63776710-63776729 MS.gene07426:intron 30.0%
GTATAAGGAAGATCAATTGA+TGG + chr1.2:63778640-63778659 None:intergenic 30.0%
GTGTCTAATGAAGTAAGTTT+CGG - chr1.2:63779699-63779718 MS.gene07426:CDS 30.0%
TAAATGCTAAAATGAGCATG+TGG + chr1.2:63778885-63778904 None:intergenic 30.0%
TCTATATCTGAACAAGATCT+GGG - chr1.2:63777955-63777974 MS.gene07426:intron 30.0%
TCTCTGAATATAGCATGTTT+AGG + chr1.2:63777380-63777399 None:intergenic 30.0%
TGAATAATAGGCTGCAAAAT+AGG - chr1.2:63776936-63776955 MS.gene07426:intron 30.0%
TTCTATATCTGAACAAGATC+TGG - chr1.2:63777954-63777973 MS.gene07426:intron 30.0%
TTTATATGGTATGGATCAAG+TGG - chr1.2:63778787-63778806 MS.gene07426:intron 30.0%
! AAGTTTGCAGAAGAGATTTT+TGG - chr1.2:63777144-63777163 MS.gene07426:intron 30.0%
! ATGGAAGAAAGAGAGAATTT+TGG - chr1.2:63775899-63775918 MS.gene07426:CDS 30.0%
! ATTAAAGTCCCTCATTTTGT+TGG + chr1.2:63777249-63777268 None:intergenic 30.0%
! GTATTTTATGTAGTTGTAGG+TGG - chr1.2:63778660-63778679 MS.gene07426:intron 30.0%
! TAACAACTTGGATTTTTCCA+TGG - chr1.2:63775985-63776004 MS.gene07426:CDS 30.0%
! TGACTGTTACTATGTTTCTA+AGG - chr1.2:63776343-63776362 MS.gene07426:CDS 30.0%
! TTGAGTTCTAATTGTTATGG+AGG - chr1.2:63776522-63776541 MS.gene07426:intron 30.0%
!! GAATTGTGTGTTGTTTAACA+TGG - chr1.2:63777875-63777894 MS.gene07426:intron 30.0%
!! TATTTTTGTGGTTGAAAGTG+AGG - chr1.2:63776689-63776708 MS.gene07426:intron 30.0%
!! TGTTGGTTGGTTTGAATAAT+AGG - chr1.2:63776924-63776943 MS.gene07426:intron 30.0%
!!! AATTTTGAGTTTCCCTTCTA+TGG - chr1.2:63779220-63779239 MS.gene07426:intron 30.0%
!!! GGGTTTTATTCGTCTAATAT+TGG + chr1.2:63777632-63777651 None:intergenic 30.0%
!!! TTTCTGAAACTTTTAGTTGC+TGG - chr1.2:63777675-63777694 MS.gene07426:intron 30.0%
AAAATTATGTCCTCCCAACA+AGG - chr1.2:63778940-63778959 MS.gene07426:intron 35.0%
AAAGGATGAGGTAGATTTGA+AGG + chr1.2:63778433-63778452 None:intergenic 35.0%
AAATTAGGACCATAATAGGG+TGG - chr1.2:63778222-63778241 MS.gene07426:intron 35.0%
AATAGAGTGGTCTCTTAGAA+TGG - chr1.2:63777076-63777095 MS.gene07426:CDS 35.0%
AGAGTTTATATTTAGGGGGT+GGG - chr1.2:63776602-63776621 MS.gene07426:intron 35.0%
AGATCTGAATACAAAGTGTG+AGG - chr1.2:63776656-63776675 MS.gene07426:intron 35.0%
ATCAATTGATGGAGAAAGAC+AGG + chr1.2:63778629-63778648 None:intergenic 35.0%
CACTATGTTGTGCATTCATT+AGG - chr1.2:63779557-63779576 MS.gene07426:CDS 35.0%
CATCTTACTAATCACCTTGT+TGG - chr1.2:63776907-63776926 MS.gene07426:intron 35.0%
CCTGTAATTCCATTCAACAA+GGG + chr1.2:63779306-63779325 None:intergenic 35.0%
CCTTGTTGAATGGAATTACA+GGG - chr1.2:63779304-63779323 MS.gene07426:intron 35.0%
CTTGTAATTCCATTCTCAGT+TGG + chr1.2:63779367-63779386 None:intergenic 35.0%
CTTGTTGAATGGAATTACAG+GGG - chr1.2:63779305-63779324 MS.gene07426:intron 35.0%
GAAATTTCTGTGTGAAGAAG+AGG - chr1.2:63777222-63777241 MS.gene07426:intron 35.0%
GACACATGATGATTAACATG+CGG + chr1.2:63779684-63779703 None:intergenic 35.0%
TAAACTCACCTCATACGTTA+AGG + chr1.2:63779046-63779065 None:intergenic 35.0%
TAAATAATACCTTGCACAGG+TGG + chr1.2:63776238-63776257 None:intergenic 35.0%
TAGAGTTTATATTTAGGGGG+TGG - chr1.2:63776601-63776620 MS.gene07426:intron 35.0%
TATGTGCTTACAGTGAATTC+TGG - chr1.2:63778732-63778751 MS.gene07426:intron 35.0%
TCACTAACTCCATACTGAAT+CGG - chr1.2:63779250-63779269 MS.gene07426:intron 35.0%
TCATTTATGCCCTTGTTGAA+TGG - chr1.2:63779294-63779313 MS.gene07426:intron 35.0%
TCCAAGTTGTTATCAATCCT+TGG + chr1.2:63775977-63775996 None:intergenic 35.0%
TCTAATGAAGTAAGTTTCGG+TGG - chr1.2:63779702-63779721 MS.gene07426:CDS 35.0%
TGAAAAGGAATCTCAGCTAA+GGG + chr1.2:63776637-63776656 None:intergenic 35.0%
TTACTAATCACCTTGTTGGT+TGG - chr1.2:63776911-63776930 MS.gene07426:intron 35.0%
! AACATTTGAAATTGTGCCAG+TGG + chr1.2:63778992-63779011 None:intergenic 35.0%
! CTACCTCATCCTTTAAAAGA+TGG - chr1.2:63778439-63778458 MS.gene07426:intron 35.0%
! CTATGATTAGAGTCCTTTTC+AGG + chr1.2:63779840-63779859 None:intergenic 35.0%
! GTGGTATTAGGGATGTTTTA+GGG + chr1.2:63777652-63777671 None:intergenic 35.0%
! TATTTATGGACTCGGTTATG+TGG - chr1.2:63778063-63778082 MS.gene07426:intron 35.0%
! TCCAAGGATTGATAACAACT+TGG - chr1.2:63775973-63775992 MS.gene07426:CDS 35.0%
! TGTGGTATTAGGGATGTTTT+AGG + chr1.2:63777653-63777672 None:intergenic 35.0%
! TTGGGAGGACATAATTTTCA+TGG + chr1.2:63778938-63778957 None:intergenic 35.0%
! TTTGAGATTCTTTCCTTGTC+TGG - chr1.2:63779331-63779350 MS.gene07426:intron 35.0%
! TTTTATGTAGTTGTAGGTGG+AGG - chr1.2:63778663-63778682 MS.gene07426:intron 35.0%
!! CAGTTTTTGAGAAATGAGAG+TGG - chr1.2:63776389-63776408 MS.gene07426:CDS 35.0%
!! GATCCATCTTTTAAAGGATG+AGG + chr1.2:63778445-63778464 None:intergenic 35.0%
!! TATGTAACACCGATTCAGTA+TGG + chr1.2:63779262-63779281 None:intergenic 35.0%
!!! CACATGTTCTGCCATTTTTT+TGG - chr1.2:63777311-63777330 MS.gene07426:intron 35.0%
!!! TTAGAGTCCTTTTCAGGTAA+AGG + chr1.2:63779834-63779853 None:intergenic 35.0%
AACGGAATCGACGATGAAAT+CGG + chr1.2:63776127-63776146 None:intergenic 40.0%
AAGCACATAAGCTGTGAAGT+TGG + chr1.2:63778721-63778740 None:intergenic 40.0%
AATGATCTTTGTCCCTTCTC+CGG + chr1.2:63777787-63777806 None:intergenic 40.0%
ACAACAATGCTCAAGACTCT+AGG - chr1.2:63779781-63779800 MS.gene07426:CDS 40.0%
ACATCCAAGTAAGACGAATG+CGG - chr1.2:63777847-63777866 MS.gene07426:intron 40.0%
ACATGATGATTAACATGCGG+AGG + chr1.2:63779681-63779700 None:intergenic 40.0%
ACATGGCTGCATATAAACGA+AGG + chr1.2:63779145-63779164 None:intergenic 40.0%
AGAAGAGGACCAACAAAATG+AGG - chr1.2:63777237-63777256 MS.gene07426:intron 40.0%
AGAGTTCTCAGCTTGGAAAA+GGG - chr1.2:63776153-63776172 MS.gene07426:CDS 40.0%
AGTTTATATTTAGGGGGTGG+GGG - chr1.2:63776604-63776623 MS.gene07426:intron 40.0%
ATATGTATTCTCTCTGCCAC+TGG - chr1.2:63778973-63778992 MS.gene07426:intron 40.0%
ATATTGCACGTGATCCTTGT+TGG + chr1.2:63778957-63778976 None:intergenic 40.0%
ATGTATTGTTGCGATGTGTG+AGG - chr1.2:63778258-63778277 MS.gene07426:intron 40.0%
ATTACAAGAAGCAGATCTGG+TGG - chr1.2:63779379-63779398 MS.gene07426:intron 40.0%
CAGAGATCCTTTACCTGAAA+AGG - chr1.2:63779824-63779843 MS.gene07426:CDS 40.0%
CCCTGTAATTCCATTCAACA+AGG + chr1.2:63779307-63779326 None:intergenic 40.0%
CCCTTGTTGAATGGAATTAC+AGG - chr1.2:63779303-63779322 MS.gene07426:intron 40.0%
CTGAAAAGGAATCTCAGCTA+AGG + chr1.2:63776638-63776657 None:intergenic 40.0%
CTGCACTATGTCATAGTATG+TGG - chr1.2:63778104-63778123 MS.gene07426:intron 40.0%
CTGCTACATACTTCCAATAG+TGG - chr1.2:63777754-63777773 MS.gene07426:intron 40.0%
GAAGAGGACCAACAAAATGA+GGG - chr1.2:63777238-63777257 MS.gene07426:intron 40.0%
GACTACACAATGTTGATCCA+GGG - chr1.2:63778182-63778201 MS.gene07426:intron 40.0%
GAGTTTATATTTAGGGGGTG+GGG - chr1.2:63776603-63776622 MS.gene07426:intron 40.0%
GGAATTACAAGAAGCAGATC+TGG - chr1.2:63779376-63779395 MS.gene07426:intron 40.0%
GTAAATTGGCCACCCTATTA+TGG + chr1.2:63778234-63778253 None:intergenic 40.0%
TAGAAGATTCTTTACTGCCC+TGG + chr1.2:63778202-63778221 None:intergenic 40.0%
TATTGCACGTGATCCTTGTT+GGG + chr1.2:63778956-63778975 None:intergenic 40.0%
TCACACATCGCAACAATACA+TGG + chr1.2:63778259-63778278 None:intergenic 40.0%
TCCATACTTTACGGCTTTCT+GGG + chr1.2:63778036-63778055 None:intergenic 40.0%
TCCATTCTCAGTTGGCATAA+AGG + chr1.2:63779359-63779378 None:intergenic 40.0%
TCCTTTATGCCAACTGAGAA+TGG - chr1.2:63779355-63779374 MS.gene07426:intron 40.0%
TCTGAATACAAAGTGTGAGG+TGG - chr1.2:63776659-63776678 MS.gene07426:intron 40.0%
TGACTACACAATGTTGATCC+AGG - chr1.2:63778181-63778200 MS.gene07426:intron 40.0%
TGCATTCATTAGGTCGTTGT+GGG - chr1.2:63779567-63779586 MS.gene07426:CDS 40.0%
TTACAAGAAGCAGATCTGGT+GGG - chr1.2:63779380-63779399 MS.gene07426:intron 40.0%
TTCCATACTTTACGGCTTTC+TGG + chr1.2:63778037-63778056 None:intergenic 40.0%
TTCTCTTCTTGAAATGCAGC+AGG + chr1.2:63779747-63779766 None:intergenic 40.0%
TTCTTCTTCAAAGCTGTCTC+CGG + chr1.2:63776031-63776050 None:intergenic 40.0%
! AATGCAGCAGGTGTCATAAA+AGG + chr1.2:63779735-63779754 None:intergenic 40.0%
! AGTGAGTCGATTCCATAGAA+GGG + chr1.2:63779235-63779254 None:intergenic 40.0%
! ATTGGAAGTATGTAGCAGAG+CGG + chr1.2:63777752-63777771 None:intergenic 40.0%
! CGGTCAGATCCATCTTTTAA+AGG + chr1.2:63778451-63778470 None:intergenic 40.0%
! CTTGGATTTTTCCATGGCAA+CGG - chr1.2:63775991-63776010 MS.gene07426:CDS 40.0%
! GATTTTCTATGCTCTGTCTC+AGG - chr1.2:63778906-63778925 MS.gene07426:intron 40.0%
! TAGTGAGTCGATTCCATAGA+AGG + chr1.2:63779236-63779255 None:intergenic 40.0%
! TTCGTCAATCGACTTCTTCA+GGG - chr1.2:63779016-63779035 MS.gene07426:intron 40.0%
!! ACAGCTTTGAAGAAGAAGAG+GGG - chr1.2:63776034-63776053 MS.gene07426:CDS 40.0%
!! AGACAGCTTTGAAGAAGAAG+AGG - chr1.2:63776032-63776051 MS.gene07426:CDS 40.0%
!! GACAGCTTTGAAGAAGAAGA+GGG - chr1.2:63776033-63776052 MS.gene07426:CDS 40.0%
!! GGTGGATGTGGATATTTTTG+TGG - chr1.2:63776677-63776696 MS.gene07426:intron 40.0%
!! TTTGGTGCTGTGAATGTAGT+GGG - chr1.2:63775917-63775936 MS.gene07426:CDS 40.0%
!!! TTTTGGTGCTGTGAATGTAG+TGG - chr1.2:63775916-63775935 MS.gene07426:CDS 40.0%
AGCAAAACAGCAAGAAGCAG+AGG - chr1.2:63779616-63779635 MS.gene07426:CDS 45.0%
ATACTTCCAATAGTGGCCAG+TGG - chr1.2:63777761-63777780 MS.gene07426:intron 45.0%
ATCGACGATGAAATCGGCAT+AGG + chr1.2:63776121-63776140 None:intergenic 45.0%
ATCTCTGTCTTCAGCAGATG+AGG + chr1.2:63779811-63779830 None:intergenic 45.0%
ATGCACAACATAGTGCGTGT+TGG + chr1.2:63779552-63779571 None:intergenic 45.0%
ATGTCCGCATTCGTCTTACT+TGG + chr1.2:63777854-63777873 None:intergenic 45.0%
GAGAGTTCTCAGCTTGGAAA+AGG - chr1.2:63776152-63776171 MS.gene07426:CDS 45.0%
GAGGGAATTGCATACTCAGT+AGG - chr1.2:63778693-63778712 MS.gene07426:intron 45.0%
GAGTTCTCAGCTTGGAAAAG+GGG - chr1.2:63776154-63776173 MS.gene07426:CDS 45.0%
GCAAAACAGCAAGAAGCAGA+GGG - chr1.2:63779617-63779636 MS.gene07426:CDS 45.0%
GTCTTAATCATCGGGTTCCT+AGG + chr1.2:63777031-63777050 None:intergenic 45.0%
GTGCATTCATTAGGTCGTTG+TGG - chr1.2:63779566-63779585 MS.gene07426:CDS 45.0%
GTTGAATGGAATTACAGGGG+CGG - chr1.2:63779308-63779327 MS.gene07426:intron 45.0%
GTTTATATTTAGGGGGTGGG+GGG - chr1.2:63776605-63776624 MS.gene07426:intron 45.0%
TACAAAGTGTGAGGTGGATG+TGG - chr1.2:63776665-63776684 MS.gene07426:intron 45.0%
TACTCCAGAGTTTACCTGCA+CGG + chr1.2:63779482-63779501 None:intergenic 45.0%
TGATGATTAACATGCGGAGG+AGG + chr1.2:63779678-63779697 None:intergenic 45.0%
TGGCATAAAGGAACCAGACA+AGG + chr1.2:63779347-63779366 None:intergenic 45.0%
TTTAGAGGCCAAAATGGCAG+TGG + chr1.2:63777703-63777722 None:intergenic 45.0%
TTTGAAAGTCCACCTGTGCA+AGG - chr1.2:63776226-63776245 MS.gene07426:intron 45.0%
! CTTCGTCAATCGACTTCTTC+AGG - chr1.2:63779015-63779034 MS.gene07426:intron 45.0%
! GCTAGTTTGTCGTGTAGAAC+TGG - chr1.2:63776849-63776868 MS.gene07426:intron 45.0%
! GTTGTGGGAAGTTTTCTTCC+TGG - chr1.2:63779582-63779601 MS.gene07426:CDS 45.0%
! TCGTCAATCGACTTCTTCAG+GGG - chr1.2:63779017-63779036 MS.gene07426:intron 45.0%
! TGCATGTGAACATGCTGACT+TGG - chr1.2:63777927-63777946 MS.gene07426:intron 45.0%
! TTTTCTTCCTGGTCACCATC+TGG - chr1.2:63779593-63779612 MS.gene07426:CDS 45.0%
!! GAATGTAGTGGGTGGTAATG+AGG - chr1.2:63775928-63775947 MS.gene07426:CDS 45.0%
!! GCTGGTTTGCTTATAGCTTC+CGG - chr1.2:63779454-63779473 MS.gene07426:intron 45.0%
!!! GCCATTTTGGCCTCTAAAGT+GGG - chr1.2:63777705-63777724 MS.gene07426:intron 45.0%
!!! TCTTGCTGTTTTGCTCCAGA+TGG + chr1.2:63779611-63779630 None:intergenic 45.0%
!!! TGCCATTTTGGCCTCTAAAG+TGG - chr1.2:63777704-63777723 MS.gene07426:intron 45.0%
AAACAGCAAGAAGCAGAGGG+TGG - chr1.2:63779620-63779639 MS.gene07426:CDS 50.0%
ACTCCAGAGTTTACCTGCAC+GGG + chr1.2:63779481-63779500 None:intergenic 50.0%
AGAAGAAGAGGGGAAGACCA+AGG - chr1.2:63776044-63776063 MS.gene07426:CDS 50.0%
AGGGGAAGACCAAGGAAGTA+TGG - chr1.2:63776052-63776071 MS.gene07426:CDS 50.0%
CAGCTTGGAAAAGGGGTAGA+GGG - chr1.2:63776161-63776180 MS.gene07426:CDS 50.0%
CCATCTGGACCATACTTCCT+TGG + chr1.2:63776064-63776083 None:intergenic 50.0%
GCCCAGAAAGCCGTAAAGTA+TGG - chr1.2:63778032-63778051 MS.gene07426:intron 50.0%
GCTGAGAACTCTCCAGTCAA+CGG + chr1.2:63776145-63776164 None:intergenic 50.0%
GCTTACAGTGAATTCTGGCG+AGG - chr1.2:63778737-63778756 MS.gene07426:intron 50.0%
GGTTGGCACTCTGTCTTTGA+AGG - chr1.2:63777997-63778016 MS.gene07426:intron 50.0%
TCAGCTTGGAAAAGGGGTAG+AGG - chr1.2:63776160-63776179 MS.gene07426:CDS 50.0%
TGACTGGAGAGTTCTCAGCT+TGG - chr1.2:63776146-63776165 MS.gene07426:CDS 50.0%
TGAGCTTTCAAGCTGCTCCA+AGG - chr1.2:63775957-63775976 MS.gene07426:CDS 50.0%
TGGTGGGATGAGTGTCTCTT+TGG - chr1.2:63779396-63779415 MS.gene07426:intron 50.0%
! CCAAGGAAGTATGGTCCAGA+TGG - chr1.2:63776061-63776080 MS.gene07426:CDS 50.0%
! CGTCAATCGACTTCTTCAGG+GGG - chr1.2:63779018-63779037 MS.gene07426:intron 50.0%
! GCCCACTTTAGAGGCCAAAA+TGG + chr1.2:63777709-63777728 None:intergenic 50.0%
! GTAGGTGGAGGTGTAAGTGA+GGG - chr1.2:63778675-63778694 MS.gene07426:intron 50.0%
! TCCATGATAGCGACGCATAG+TGG - chr1.2:63777349-63777368 MS.gene07426:intron 50.0%
! TGTAGGTGGAGGTGTAAGTG+AGG - chr1.2:63778674-63778693 MS.gene07426:intron 50.0%
! TTTTGCTCCAGATGGTGACC+AGG + chr1.2:63779603-63779622 None:intergenic 50.0%
! TTTTTCCATGGCAACGGTGC+CGG - chr1.2:63775997-63776016 MS.gene07426:CDS 50.0%
!! AGGGGGTACCTTAACGTATG+AGG - chr1.2:63779035-63779054 MS.gene07426:intron 50.0%
!! GTGCAGGTAAACTCTGGAGT+AGG - chr1.2:63779481-63779500 MS.gene07426:intron 50.0%
!! TCATCGTCGATTCCGTTGAC+TGG - chr1.2:63776130-63776149 MS.gene07426:CDS 50.0%
!! TGCTGGAACCACTGCCATTT+TGG - chr1.2:63777692-63777711 MS.gene07426:intron 50.0%
AGAGTTTACCTGCACGGGAC+CGG + chr1.2:63779476-63779495 None:intergenic 55.0%
CACCCAATACTCGGCCATCT+GGG + chr1.2:63779426-63779445 None:intergenic 55.0%
CGAGTCCACCACCCAATACT+CGG + chr1.2:63779435-63779454 None:intergenic 55.0%
CGCTGTTGTGCCCACTTTAG+AGG + chr1.2:63777718-63777737 None:intergenic 55.0%
GCCACTATGCGTCGCTATCA+TGG + chr1.2:63777353-63777372 None:intergenic 55.0%
GGAGCAGCTTGAAAGCTCAC+AGG + chr1.2:63775956-63775975 None:intergenic 55.0%
GGGATGAGTGTCTCTTTGGC+AGG - chr1.2:63779400-63779419 MS.gene07426:intron 55.0%
TGCACGTGATCCTTGTTGGG+AGG + chr1.2:63778953-63778972 None:intergenic 55.0%
TTCCAATAGTGGCCAGTGGC+CGG - chr1.2:63777765-63777784 MS.gene07426:intron 55.0%
! GGTGCTGTGAATGTAGTGGG+TGG - chr1.2:63775920-63775939 MS.gene07426:CDS 55.0%
AGGCCCAGATGGCCGAGTAT+TGG - chr1.2:63779420-63779439 MS.gene07426:intron 60.0%
CCACCCAATACTCGGCCATC+TGG + chr1.2:63779427-63779446 None:intergenic 60.0%
CCAGATGGTAAGCCTGCTCC+TGG - chr1.2:63776076-63776095 MS.gene07426:CDS 60.0%
CCAGGAGCAGGCTTACCATC+TGG + chr1.2:63776079-63776098 None:intergenic 60.0%
GGCCCAGATGGCCGAGTATT+GGG - chr1.2:63779421-63779440 MS.gene07426:intron 60.0%
GGTCCCGTGCAGGTAAACTC+TGG - chr1.2:63779475-63779494 MS.gene07426:intron 60.0%
GTCTCTTTGGCAGGCCCAGA+TGG - chr1.2:63779409-63779428 MS.gene07426:intron 60.0%
TATAGCTTCCGGTCCCGTGC+AGG - chr1.2:63779465-63779484 MS.gene07426:intron 60.0%
TATTTAGGGGGTGGGGGGAG+TGG - chr1.2:63776610-63776629 MS.gene07426:intron 60.0%
TTTGTCCCTTCTCCGGCCAC+TGG + chr1.2:63777780-63777799 None:intergenic 60.0%
! GAAAGCGCAGTCACAGCTCC+AGG + chr1.2:63776097-63776116 None:intergenic 60.0%
!! CCAGATGGCCGAGTATTGGG+TGG - chr1.2:63779424-63779443 MS.gene07426:intron 60.0%
!! GATGGCCGAGTATTGGGTGG+TGG - chr1.2:63779427-63779446 MS.gene07426:intron 60.0%
!! GTATTGGGTGGTGGACTCGC+TGG - chr1.2:63779436-63779455 MS.gene07426:intron 60.0%
AGTGGCCAGTGGCCGGAGAA+GGG - chr1.2:63777772-63777791 MS.gene07426:intron 65.0%
CTCCGGCCACTGGCCACTAT+TGG + chr1.2:63777770-63777789 None:intergenic 65.0%
GCAGTCACAGCTCCAGGAGC+AGG + chr1.2:63776091-63776110 None:intergenic 65.0%
GCTGTCTCCGGCAACGACAC+CGG + chr1.2:63776019-63776038 None:intergenic 65.0%
TAGTGGCCAGTGGCCGGAGA+AGG - chr1.2:63777771-63777790 MS.gene07426:intron 65.0%
!! AACGGTGCCGGTGTCGTTGC+CGG - chr1.2:63776009-63776028 MS.gene07426:CDS 65.0%
CGACACCGGCACCGTTGCCA+TGG + chr1.2:63776005-63776024 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 63775899 63779875 63775899 ID=MS.gene07426
chr1.2 mRNA 63775899 63779875 63775899 ID=MS.gene07426.t1;Parent=MS.gene07426
chr1.2 exon 63779527 63779875 63779527 ID=MS.gene07426.t1.exon1;Parent=MS.gene07426.t1
chr1.2 CDS 63779527 63779875 63779527 ID=cds.MS.gene07426.t1;Parent=MS.gene07426.t1
chr1.2 exon 63777016 63777101 63777016 ID=MS.gene07426.t1.exon2;Parent=MS.gene07426.t1
chr1.2 CDS 63777016 63777101 63777016 ID=cds.MS.gene07426.t1;Parent=MS.gene07426.t1
chr1.2 exon 63776718 63776846 63776718 ID=MS.gene07426.t1.exon3;Parent=MS.gene07426.t1
chr1.2 CDS 63776718 63776846 63776718 ID=cds.MS.gene07426.t1;Parent=MS.gene07426.t1
chr1.2 exon 63776288 63776449 63776288 ID=MS.gene07426.t1.exon4;Parent=MS.gene07426.t1
chr1.2 CDS 63776288 63776449 63776288 ID=cds.MS.gene07426.t1;Parent=MS.gene07426.t1
chr1.2 exon 63775899 63776195 63775899 ID=MS.gene07426.t1.exon5;Parent=MS.gene07426.t1
chr1.2 CDS 63775899 63776195 63775899 ID=cds.MS.gene07426.t1;Parent=MS.gene07426.t1
Gene Sequence

>MS.gene07426

ATGGAAGAAAGAGAGAATTTTGGTGCTGTGAATGTAGTGGGTGGTAATGAGGTTCCTGTGAGCTTTCAAGCTGCTCCAAGGATTGATAACAACTTGGATTTTTCCATGGCAACGGTGCCGGTGTCGTTGCCGGAGACAGCTTTGAAGAAGAAGAGGGGAAGACCAAGGAAGTATGGTCCAGATGGTAAGCCTGCTCCTGGAGCTGTGACTGCGCTTTCGCCTATGCCGATTTCATCGTCGATTCCGTTGACTGGAGAGTTCTCAGCTTGGAAAAGGGGTAGAGGGAAGCCTGTTGAATCTATGAAGAAATCATCTTTTAAGTTTGATTTTGAAAGTCCACCTGTGCAAGGTATTATTTATAGTTATTTGATCTTTGAAATGTTTTGAAGCTTTTAATTTTAGTTAGTATGTGTTTATTTTTCCTTTTTTTCTTATAATTTTCATTGACTGTTACTATGTTTCTAAGGTTTTGTTTTTACTGTTACATTTGCAGTTTTTGAGAAATGAGAGTGGAATTCATTATTATTCAGGAAAATAAACAGTGAAATTTATAATGAATCAATTAATCCTCTTGTTATTTTTTCAACATAATTGATTTTTGTTTTCATTTTAATTTTTGTTTTTTGAGTTCTAATTGTTATGGAGGTAGTTATTTTCTCTGATCTGTGTTTATAGTGTGAATTTGTATTTTTGATTTTGTGATAGAGTTTATATTTAGGGGGTGGGGGGAGTGGACCCTTAGCTGAGATTCCTTTTCAGATCTGAATACAAAGTGTGAGGTGGATGTGGATATTTTTGTGGTTGAAAGTGAGGTTGTATTTGTTCTGTTTAGGGTAGCTTATGATGCTCCTTATTTTCCTTTATAAGAAGAAGAAAAGTATTGCATTATATGACAATGGAAATGGTTAGAGTAAATGAAGGGACCAACTAGAATGAGTCTAATAGTTATAGCTAGTTTGTCGTGTAGAACTGGTCTAAATCTAATCTAATAACAATAATTAATTTTAACATCTTACTAATCACCTTGTTGGTTGGTTTGAATAATAGGCTGCAAAATAGGAATTTCAGTCTGAAATATTTCCAAATTTTAACTTGTTCTTAATCATGGATATATTATTAAGAGCAATCTCCTAGGAACCCGATGATTAAGACAAAAAAATGTGATCTTCTTGTAAAAAATAGAGTGGTCTCTTAGAATGGTAGTATCCATCAGTATTTTAATCAAAGGCATTGATATATATTTTAAAGTTTGCAGAAGAGATTTTTGGTTGCATATAGTATAAGGTATGCTTGGATGAAGAGATTTATAGAACGTATTAGGTAGAAATTTCTGTGTGAAGAAGAGGACCAACAAAATGAGGGACTTTAATAAGATCATTTTAAAACGCTACCTTTGTTTTTTTTTTAACATTCACATGTTCTGCCATTTTTTTGGCATAGTTATTATCAATCCATGATAGCGACGCATAGTGGCTGACCCTAAACATGCTATATTCAGAGAACGTATTCTGAATTTCATATACATATTAAATTAAATTATTAATAATACAATATATACAAATGCCAATAATTTACATAATACTTAAAATTTAACAAATACTCTTAAGTAACAATAATAAGTCATAGTTCTTAATCAAAACACTAGTAAATACCAAAAAACTCGTAAAACAAACAAGTTTAAGCATCTAAATGCTTAATGTAACTAAACATCAAAATTTGATGTTTATATCCCAATATTAGACGAATAAAACCCTAAAACATCCCTAATACCACATTTTTCTGAAACTTTTAGTTGCTGGAACCACTGCCATTTTGGCCTCTAAAGTGGGCACAACAGCGACAGAAGAAAACCGCTCTGCTACATACTTCCAATAGTGGCCAGTGGCCGGAGAAGGGACAAAGATCATTACTTAATACTGGCATTTTCTTCCCTTTTCTTTATCTTGCAACATCCAAGTAAGACGAATGCGGACATTGAATTGTGTGTTGTTTAACATGGTAGACAACATGCATATGTTACGTTTTGCATGCATGTGAACATGCTGACTTGGTGACTTCTATATCTGAACAAGATCTGGGTTCTTTAATTGTTTAAGAGGGTTGGCACTCTGTCTTTGAAGGTTATGAATTAAGGCCCAGAAAGCCGTAAAGTATGGAACACAATTATTTATGGACTCGGTTATGTGGATACTGTTGTAATCGCTTCTGCACTATGTCATAGTATGTGGTTGCAAGTCAGAACTCTATAAGCAACATATAGAAGAGAAGACACTTAATTGTTTTGACTACACAATGTTGATCCAGGGCAGTAAAGAATCTTCTAAAATTAGGACCATAATAGGGTGGCCAATTTACTGCCATGTATTGTTGCGATGTGTGAGGATGTTGAGTTTGCTGTCTAATTAAATACATGAATTGAGCTGGAGTTAAGACTTTCAAATATGGTTATTGAATTTTTCATCGTTCTAAAAATTCTTTATGCTTAATTTGCTGTTTCTATTATTGAAGTCTCTTGGAAAATAAATCATTTTCCTTCAAATCTACCTCATCCTTTAAAAGATGGATCTGACCGAATGATACATAAGCTTCTTCTTTTCTTTATTTTTTATTTTATTTTTATATTTAATGGGTTGCTTTTATATAATGAATGAACTGGTTATTGTTTTTATTTTTGTGAACTATAAAGGAAGTTCCTCTCTAGAATTTCTTTATTACATTCTTGCATTTCCTGTCTTTCTCCATCAATTGATCTTCCTTATACGTATTTTATGTAGTTGTAGGTGGAGGTGTAAGTGAGGGAATTGCATACTCAGTAGGTGCCAACTTCACAGCTTATGTGCTTACAGTGAATTCTGGCGAGGTAATCTGTTCCTTTCCTTTTATCATATTTTATATGGTATGGATCAAGTGGTTGTGTATGTTGTCATTATTGAAGTAAATTATTGACTCTGGATTGTAGTTTTTGAATTTCATTTTTGGTGTTCCACATGCTCATTTTAGCATTTATGATTTTCTATGCTCTGTCTCAGGATGTTACCATGAAAATTATGTCCTCCCAACAAGGATCACGTGCAATATGTATTCTCTCTGCCACTGGCACAATTTCAAATGTTACACTTCGTCAATCGACTTCTTCAGGGGGTACCTTAACGTATGAGGTGAGTTTAATCTTGTTCATCTACATAAAAAAAATAGAGTTCAGTCATTTGTTTCTCTATCATATTGGAATATGTACCATAAAGTCCTTCGTTTATATGCAGCCATGTCTGTCTTGTATTATATGTATTGATGTGTTGACTCTACACATATCAAATATTAATTAATTTTGAGTTTCCCTTCTATGGAATCGACTCACTAACTCCATACTGAATCGGTGTTACATATATCTTTCAATTTCATTTATGCCCTTGTTGAATGGAATTACAGGGGCGGTTTGAGATTCTTTCCTTGTCTGGTTCCTTTATGCCAACTGAGAATGGAATTACAAGAAGCAGATCTGGTGGGATGAGTGTCTCTTTGGCAGGCCCAGATGGCCGAGTATTGGGTGGTGGACTCGCTGGTTTGCTTATAGCTTCCGGTCCCGTGCAGGTAAACTCTGGAGTAGGTTTTATAAAAAAAAATGTTAGCAACACTCATTTAACACTCTCTTTCCAACACGCACTATGTTGTGCATTCATTAGGTCGTTGTGGGAAGTTTTCTTCCTGGTCACCATCTGGAGCAAAACAGCAAGAAGCAGAGGGTGGAGCATAATATATCGACTATTACACATAATAATCCTCCTCCGCATGTTAATCATCATGTGTCTAATGAAGTAAGTTTCGGTGGAGTGAAGCCTTTTATGACACCTGCTGCATTTCAAGAAGAGAATATTGTTTCTTTCAACAACAATGCTCAAGACTCTAGGAACACCTCATCTGCTGAAGACAGAGATCCTTTACCTGAAAAGGACTCTAATCATAGTCAATCAACTACTTGA
Protein sequence

>MS.gene07426.t1

MEERENFGAVNVVGGNEVPVSFQAAPRIDNNLDFSMATVPVSLPETALKKKRGRPRKYGPDGKPAPGAVTALSPMPISSSIPLTGEFSAWKRGRGKPVESMKKSSFKFDFESPPVQVVGGGVSEGIAYSVGANFTAYVLTVNSGEDVTMKIMSSQQGSRAICILSATGTISNVTLRQSTSSGGTLTYEGRFEILSLSGSFMPTENGITRSRSGGMSVSLAGPDGRVLGGGLAGLLIASGPVQVVVGSFLPGHHLEQNSKKQRVEHNISTITHNNPPPHVNHHVSNEVSFGGVKPFMTPAAFQEENIVSFNNNAQDSRNTSSAEDRDPLPEKDSNHSQSTT