AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055849


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055849.t1 MTR_2g090140 97.889 379 7 1 1 379 1 378 0.0 773
MS.gene055849.t1 MTR_1g050432 50.674 371 171 5 6 369 12 377 7.38e-132 383
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055849.t1 AT2G20860 80.533 375 67 2 2 376 1 369 0.0 590
MS.gene055849.t1 AT2G20860 80.533 375 67 2 2 376 1 369 0.0 590
MS.gene055849.t1 AT2G20860 80.533 375 67 2 2 376 1 369 0.0 590
MS.gene055849.t1 AT5G08415 59.060 298 120 2 73 369 89 385 3.77e-124 363

Find 124 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTCATCCATTTCGGTTT+TGG 0.218112 2.1:+11267311 None:intergenic
GACCAACACTCTCCCATATT+AGG 0.242683 2.1:+11267200 None:intergenic
TCTCCATTGTCTTCACAATT+TGG 0.254997 2.1:+11264359 None:intergenic
ATCGATTCCTTCATCCATTT+CGG 0.312761 2.1:+11267305 None:intergenic
ACTGCTACTATTATGATTCT+TGG 0.317053 2.1:-11267155 MS.gene055849:CDS
GCCACATTAGTGGGCTCATC+AGG 0.324211 2.1:+11265300 None:intergenic
AGAGGCGAAGTGCCCTAATA+TGG 0.325795 2.1:-11267213 MS.gene055849:CDS
GTAGAGAAGGTTTCCAAATC+AGG 0.347575 2.1:-11264556 MS.gene055849:CDS
AGCAATTGCATCGTGGGGTT+TGG 0.354978 2.1:-11265274 MS.gene055849:CDS
GGCTCATCAGGGTCAGGTGG+TGG 0.361593 2.1:+11265312 None:intergenic
GTACGCGTTGTTCGATTTCA+AGG 0.375043 2.1:+11267367 None:intergenic
GGTGAGATTCTGTGGAAATT+CGG 0.394489 2.1:+11267442 None:intergenic
TCAAGGAAATGAAGTCTGAT+AGG 0.398886 2.1:+11267384 None:intergenic
TCATCAGGGTCAGGTGGTGG+AGG 0.400338 2.1:+11265315 None:intergenic
TGATACTGGCATATGGCGTT+TGG 0.402301 2.1:+11264282 None:intergenic
ACCAAGACTTCAATAATGTT+AGG 0.408729 2.1:-11264400 MS.gene055849:CDS
TTTGAGAAGTATCAGACTAT+TGG 0.410051 2.1:-11264238 MS.gene055849:CDS
ACCTAACATTATTGAAGTCT+TGG 0.413462 2.1:+11264399 None:intergenic
TGGATGAAGGAATCGATTCC+TGG 0.415772 2.1:-11267299 MS.gene055849:CDS
ATGGAGAAGGTGAGAGCAGC+AGG 0.415946 2.1:-11264343 MS.gene055849:CDS
TCAGCATTTCCTCGAAAGTC+GGG 0.417079 2.1:+11264583 None:intergenic
AAGGACATCTAATCCTGATT+TGG 0.417297 2.1:+11264543 None:intergenic
ATTGTCTTCACAATTTGGTC+AGG 0.418891 2.1:+11264364 None:intergenic
ATACTTGTACTCGAGGTTGC+AGG 0.421929 2.1:-11267130 MS.gene055849:intron
ACCAACACTCTCCCATATTA+GGG 0.424555 2.1:+11267201 None:intergenic
ATCTTTGGATGTTCTAATGA+TGG 0.429607 2.1:-11264452 MS.gene055849:CDS
TCCCGCAGGGGCATAATCCT+TGG 0.435729 2.1:+11264429 None:intergenic
ATCCGCTTCCAAAACCGAAA+TGG 0.438228 2.1:-11267319 MS.gene055849:CDS
GGTGTAATATATTCTGATAC+TGG 0.448209 2.1:+11264268 None:intergenic
TGCAAGACGAGCTCGGAGTT+CGG 0.450209 2.1:+11267421 None:intergenic
CTTCAATAATGTTAGGTTGT+GGG 0.451604 2.1:-11264393 MS.gene055849:CDS
TCAGACTATTGGCATGGAAA+TGG 0.455998 2.1:-11264227 MS.gene055849:intron
GGATTTCGATATGTGGCATC+CGG 0.456753 2.1:-11263584 MS.gene055849:CDS
GGTGGTTGTTGTTGTGGTTG+CGG 0.462795 2.1:+11267475 None:intergenic
AAATGACCGCTCCCTTGATC+AGG 0.466961 2.1:+11265213 None:intergenic
TATATTCTGATACTGGCATA+TGG 0.475977 2.1:+11264275 None:intergenic
TACTGGCATATGGCGTTTGG+AGG 0.478307 2.1:+11264285 None:intergenic
GGTGTTGATGTGATGACATT+TGG 0.481557 2.1:-11264322 MS.gene055849:CDS
ACTTCAATAATGTTAGGTTG+TGG 0.481662 2.1:-11264394 MS.gene055849:CDS
TTTGCAATGTTAAGACATCA+AGG 0.482840 2.1:-11265341 MS.gene055849:CDS
TGGCATCCGGGCCCATGGTA+AGG 0.484495 2.1:-11263571 MS.gene055849:CDS
TGTTGGTCTGGTGGTGAAAC+GGG 0.486925 2.1:-11267185 MS.gene055849:CDS
GGCTGAAGCAATTGCATCGT+GGG 0.490274 2.1:-11265280 MS.gene055849:CDS
CGTGATGATTTACCTGATCA+AGG 0.493451 2.1:-11265225 MS.gene055849:CDS
TTCAATAATGTTAGGTTGTG+GGG 0.495715 2.1:-11264392 MS.gene055849:CDS
CTGTGGAAATTCGGAGGATG+AGG 0.496807 2.1:+11267451 None:intergenic
AAATGAAGTCTGATAGGGAC+GGG 0.497026 2.1:+11267390 None:intergenic
AATCCATGATTGACTCAGAT+CGG 0.499421 2.1:-11263517 MS.gene055849:CDS
TGAGGCGGTGGTTGTTGTTG+TGG 0.500516 2.1:+11267469 None:intergenic
GCAACAGTCCCCGACTTTCG+AGG 0.501770 2.1:-11264592 MS.gene055849:intron
ATCCATGATTGACTCAGATC+GGG 0.502707 2.1:-11263516 MS.gene055849:CDS
GGATGTTCTAATGATGGCCA+AGG 0.512226 2.1:-11264446 MS.gene055849:CDS
AATTGCTTCAGCCACATTAG+TGG 0.519729 2.1:+11265290 None:intergenic
AACTCCGAGCTCGTCTTGCA+AGG 0.520430 2.1:-11267418 MS.gene055849:CDS
GCCAAGGATTATGCCCCTGC+GGG 0.523274 2.1:-11264430 MS.gene055849:CDS
ATCGTGGGGTTTGGATTATG+TGG 0.523491 2.1:-11265265 MS.gene055849:CDS
TCCAAAACCGAAATGGATGA+AGG 0.524845 2.1:-11267312 MS.gene055849:CDS
AGCCCGATCTGAGTCAATCA+TGG 0.525147 2.1:+11263514 None:intergenic
GTCTTGGTGAGGGTTCCCGC+AGG 0.527483 2.1:+11264415 None:intergenic
GAGGCGAAGTGCCCTAATAT+GGG 0.528184 2.1:-11267212 MS.gene055849:CDS
TGATACTTCTCAAAGGCCTC+AGG 0.528435 2.1:+11264247 None:intergenic
GTGTTGGTCTGGTGGTGAAA+CGG 0.530493 2.1:-11267186 MS.gene055849:CDS
CTTGGTGATACTTGTACTCG+AGG 0.530963 2.1:-11267137 MS.gene055849:CDS
CTCAGCATTTCCTCGAAAGT+CGG 0.531294 2.1:+11264582 None:intergenic
GTTGCGGTGGTGAAAGAGAA+AGG 0.531601 2.1:+11267491 None:intergenic
AATATGGGAGAGTGTTGGTC+TGG 0.533648 2.1:-11267197 MS.gene055849:CDS
CATGGTAAGGTCATCATACA+AGG 0.536106 2.1:-11263558 MS.gene055849:CDS
AGAGCTACAGAGTGCTGTGC+GGG 0.536462 2.1:-11264497 MS.gene055849:CDS
ATTGCTTCAGCCACATTAGT+GGG 0.538011 2.1:+11265291 None:intergenic
AAATGCTGAGTGTGTAGAGA+AGG 0.538656 2.1:-11264569 MS.gene055849:CDS
CAAGGAAATGAAGTCTGATA+GGG 0.540465 2.1:+11267385 None:intergenic
GAGAGAATTGAAACTTCATA+CGG 0.542449 2.1:-11267243 MS.gene055849:CDS
AGGAATCGATTCCTGGTGGT+TGG 0.544922 2.1:-11267292 MS.gene055849:CDS
AAGGCTTCTATCAGTATGCT+AGG 0.546070 2.1:+11265156 None:intergenic
CATTATTGAAGTCTTGGTGA+GGG 0.546919 2.1:+11264405 None:intergenic
ACGCGTACTCTGTTGAAGTC+GGG 0.547139 2.1:-11267352 MS.gene055849:CDS
TTAGTGGGCTCATCAGGGTC+AGG 0.553845 2.1:+11265306 None:intergenic
ACTTCATACGGTTTGTGAAG+AGG 0.555784 2.1:-11267231 MS.gene055849:CDS
CGGAGTTCGGTGAGATTCTG+TGG 0.558480 2.1:+11267434 None:intergenic
GTGGGCTCATCAGGGTCAGG+TGG 0.563088 2.1:+11265309 None:intergenic
GATTTCGATATGTGGCATCC+GGG 0.563544 2.1:-11263583 MS.gene055849:CDS
ATTCCCTTGCAAGACGAGCT+CGG 0.563832 2.1:+11267414 None:intergenic
ACTCCGAGCTCGTCTTGCAA+GGG 0.566242 2.1:-11267417 MS.gene055849:CDS
ATATGTGGCATCCGGGCCCA+TGG 0.566837 2.1:-11263576 MS.gene055849:CDS
AGCATACTGATAGAAGCCTT+AGG 0.568413 2.1:-11265153 MS.gene055849:intron
TGATGACCTTACCATGGGCC+CGG 0.568904 2.1:+11263565 None:intergenic
TGCACATACTTCCAACCACC+AGG 0.576469 2.1:+11267281 None:intergenic
ATGGGAGAGTGTTGGTCTGG+TGG 0.578110 2.1:-11267194 MS.gene055849:CDS
TCTTGGTGAGGGTTCCCGCA+GGG 0.578995 2.1:+11264416 None:intergenic
CTTGGTGAGGGTTCCCGCAG+GGG 0.579756 2.1:+11264417 None:intergenic
CTTGTATGATGACCTTACCA+TGG 0.582701 2.1:+11263559 None:intergenic
AAATTCGGAGGATGAGGCGG+TGG 0.583629 2.1:+11267457 None:intergenic
AACGCGTACTCTGTTGAAGT+CGG 0.586476 2.1:-11267353 MS.gene055849:CDS
AAGATTGCTTAAAATTAGCA+CGG 0.591721 2.1:+11264470 None:intergenic
GTAAGGTCATCATACAAGGC+AGG 0.594661 2.1:-11263554 MS.gene055849:CDS
CCCTGATGAGCCCACTAATG+TGG 0.596860 2.1:-11265301 MS.gene055849:CDS
GCCCTAATATGGGAGAGTGT+TGG 0.597098 2.1:-11267202 MS.gene055849:CDS
TTGTATGATGACCTTACCAT+GGG 0.598531 2.1:+11263560 None:intergenic
TGGAAATTCGGAGGATGAGG+CGG 0.603566 2.1:+11267454 None:intergenic
ACATTATTGAAGTCTTGGTG+AGG 0.604393 2.1:+11264404 None:intergenic
ACTGGCATATGGCGTTTGGA+GGG 0.606011 2.1:+11264286 None:intergenic
GTGATAGGGATTTCGATATG+TGG 0.606126 2.1:-11263591 MS.gene055849:intron
GATTTACCTGATCAAGGGAG+CGG 0.608171 2.1:-11265219 MS.gene055849:CDS
GAAGTATCAGACTATTGGCA+TGG 0.611193 2.1:-11264233 MS.gene055849:CDS
CGAGAGAGATGATGTACTCA+CGG 0.613028 2.1:-11267553 None:intergenic
CTGTCTCAACATTATGCGCA+AGG 0.616200 2.1:+11264524 None:intergenic
GTGATGATTTACCTGATCAA+GGG 0.625552 2.1:-11265224 MS.gene055849:CDS
AATTGTGAAGACAATGGAGA+AGG 0.629019 2.1:-11264356 MS.gene055849:CDS
CCACATTAGTGGGCTCATCA+GGG 0.630322 2.1:+11265301 None:intergenic
GAAATGAAGTCTGATAGGGA+CGG 0.631421 2.1:+11267389 None:intergenic
AATCATAATAGTAGCAGTAG+CGG 0.634511 2.1:+11267160 None:intergenic
CAGCATTTCCTCGAAAGTCG+GGG 0.636512 2.1:+11264584 None:intergenic
AATAGTCTGATACTTCTCAA+AGG 0.644183 2.1:+11264240 None:intergenic
GGCCAAGGATTATGCCCCTG+CGG 0.647190 2.1:-11264431 MS.gene055849:CDS
ATCAGAATATATTACACCTG+AGG 0.655152 2.1:-11264263 MS.gene055849:CDS
GGTTGTTGTTGTGGTTGCGG+TGG 0.658203 2.1:+11267478 None:intergenic
TGACCAAATTGTGAAGACAA+TGG 0.660066 2.1:-11264362 MS.gene055849:CDS
GAGATTCTGTGGAAATTCGG+AGG 0.662089 2.1:+11267445 None:intergenic
CTTGATCAGGTAAATCATCA+CGG 0.667016 2.1:+11265226 None:intergenic
AATGAAGTCTGATAGGGACG+GGG 0.674374 2.1:+11267391 None:intergenic
GCTGAAGCAATTGCATCGTG+GGG 0.675101 2.1:-11265279 MS.gene055849:CDS
TGGCTGAAGCAATTGCATCG+TGG 0.685188 2.1:-11265281 MS.gene055849:CDS
AAGAGCTACAGAGTGCTGTG+CGG 0.714846 2.1:-11264498 MS.gene055849:CDS
ATGAAGGAATCGATTCCTGG+TGG 0.794700 2.1:-11267296 MS.gene055849:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAACATGTTTAT+TGG - chr2.1:11266281-11266300 MS.gene055849:intron 10.0%
!! AAAAAAAAAACATGTTTATT+GGG - chr2.1:11266282-11266301 MS.gene055849:intron 10.0%
!!! TAGAATATTTTTATAGTTTA+GGG - chr2.1:11264588-11264607 MS.gene055849:CDS 10.0%
!!! TTAGAATATTTTTATAGTTT+AGG - chr2.1:11264587-11264606 MS.gene055849:CDS 10.0%
!! TATTCAATTAATCTAAAAAG+TGG + chr2.1:11264361-11264380 None:intergenic 15.0%
!! TTTATTTATTTGTAGATGAA+AGG - chr2.1:11266880-11266899 MS.gene055849:intron 15.0%
!!! ATGGAAGTTTTTTTATTTTT+AGG + chr2.1:11265394-11265413 None:intergenic 15.0%
!!! TGTTTTAGTATTCAAAATTT+GGG - chr2.1:11263974-11263993 MS.gene055849:intron 15.0%
!!! TTATCACATTAATCTATTTT+CGG + chr2.1:11265939-11265958 None:intergenic 15.0%
!!! TTGTTTTAGTATTCAAAATT+TGG - chr2.1:11263973-11263992 MS.gene055849:intron 15.0%
!!! TTTTCATTAGAATTAGAATA+TGG + chr2.1:11265413-11265432 None:intergenic 15.0%
!! AAATAAACTATATACTCTCA+CGG + chr2.1:11265469-11265488 None:intergenic 20.0%
!! AATAACTGAAAAAAAACCAT+CGG - chr2.1:11264377-11264396 MS.gene055849:CDS 20.0%
!! AATTAAATCTCTATAGGAAT+GGG + chr2.1:11267235-11267254 None:intergenic 20.0%
!! AATTTGTCATTGTTGAATAA+TGG - chr2.1:11264730-11264749 MS.gene055849:intron 20.0%
!! ATAAATTAAACTATGAAGCA+TGG - chr2.1:11264012-11264031 MS.gene055849:intron 20.0%
!! ATACAAGGCATAAAATATTT+AGG - chr2.1:11267035-11267054 MS.gene055849:intron 20.0%
!! ATATAAAAAAATCAGAACCA+CGG + chr2.1:11266860-11266879 None:intergenic 20.0%
!! GATGAAAAAAACATAAAACT+TGG + chr2.1:11264779-11264798 None:intergenic 20.0%
!! TAACTGATGAATCTAAAAAA+TGG - chr2.1:11264664-11264683 MS.gene055849:intron 20.0%
!! TATATGAAAATCCATCAATT+TGG + chr2.1:11264523-11264542 None:intergenic 20.0%
!! TCTAATGAAAATATTTCCAA+GGG - chr2.1:11265422-11265441 MS.gene055849:intron 20.0%
!! TGATGTATTTCATATAGTTA+GGG + chr2.1:11264471-11264490 None:intergenic 20.0%
!! TTCTAATGAAAATATTTCCA+AGG - chr2.1:11265421-11265440 MS.gene055849:intron 20.0%
!! TTGATGTATTTCATATAGTT+AGG + chr2.1:11264472-11264491 None:intergenic 20.0%
!!! ATGGATTTTCATATACTTTA+TGG - chr2.1:11264528-11264547 MS.gene055849:CDS 20.0%
!!! CATTTACTAAAATCTTTTAG+TGG - chr2.1:11266993-11267012 MS.gene055849:intron 20.0%
!!! GAATCTAAAAAATGGTTTTT+TGG - chr2.1:11264672-11264691 MS.gene055849:intron 20.0%
!!! TATCACATTAATCTATTTTC+GGG + chr2.1:11265938-11265957 None:intergenic 20.0%
! AAAAAAGGCCACATTTAATA+TGG + chr2.1:11267176-11267195 None:intergenic 25.0%
! AAATTATGCAAAAAAATCCG+TGG + chr2.1:11264913-11264932 None:intergenic 25.0%
! AAGATTGCTTAAAATTAGCA+CGG + chr2.1:11266574-11266593 None:intergenic 25.0%
! AATAAACTATATACTCTCAC+GGG + chr2.1:11265468-11265487 None:intergenic 25.0%
! AATTATGCAAAAAAATCCGT+GGG + chr2.1:11264912-11264931 None:intergenic 25.0%
! AATTCTACTTTGTATGTGAT+AGG - chr2.1:11267435-11267454 MS.gene055849:CDS 25.0%
! AGCTACAATTAAATCTCTAT+AGG + chr2.1:11267241-11267260 None:intergenic 25.0%
! ATAAGCAAGTTGTAATACTT+TGG - chr2.1:11265198-11265217 MS.gene055849:CDS 25.0%
! ATAATCTCATCGAATGATAT+TGG - chr2.1:11264807-11264826 MS.gene055849:intron 25.0%
! ATATTCAAAATGCATACCTA+AGG + chr2.1:11265907-11265926 None:intergenic 25.0%
! ATGACATCAATATGAAATGT+CGG - chr2.1:11264120-11264139 MS.gene055849:intron 25.0%
! ATTCTACTTTGTATGTGATA+GGG - chr2.1:11267436-11267455 MS.gene055849:CDS 25.0%
! ATTTGATAGATAGGTGAATT+AGG - chr2.1:11266145-11266164 MS.gene055849:intron 25.0%
! CAACAAAATTATAACAGCTT+TGG + chr2.1:11266945-11266964 None:intergenic 25.0%
! CAATTAAATCTCTATAGGAA+TGG + chr2.1:11267236-11267255 None:intergenic 25.0%
! CCTAAAATGAAAATTCACTA+TGG - chr2.1:11266173-11266192 MS.gene055849:intron 25.0%
! GAAAAAAACATAAAACTTGG+AGG + chr2.1:11264776-11264795 None:intergenic 25.0%
! GCGAAAATTGAAAAATTGAT+TGG + chr2.1:11263944-11263963 None:intergenic 25.0%
! GTCTCCTTAATAATATAACT+TGG + chr2.1:11266379-11266398 None:intergenic 25.0%
! GTTTAAACGAAATTATTCCT+AGG - chr2.1:11265355-11265374 MS.gene055849:intron 25.0%
! TATAAAAAAATCAGAACCAC+GGG + chr2.1:11266859-11266878 None:intergenic 25.0%
! TGCTAATTATGGGATAAAAA+AGG + chr2.1:11267191-11267210 None:intergenic 25.0%
! TGTTACACATGTTCATTATA+GGG - chr2.1:11266343-11266362 MS.gene055849:intron 25.0%
! TTGCTAATCCATATTAAATG+TGG - chr2.1:11267165-11267184 MS.gene055849:CDS 25.0%
!! AATAGATTTGAAATGTAGTG+TGG - chr2.1:11264161-11264180 MS.gene055849:intron 25.0%
!! ACTCCTAAGAATGTTATTTA+GGG - chr2.1:11265584-11265603 MS.gene055849:intron 25.0%
!! ATATTTTATGCCTTGTATTG+TGG + chr2.1:11267033-11267052 None:intergenic 25.0%
!! CAAAGCTGTTATAATTTTGT+TGG - chr2.1:11266943-11266962 MS.gene055849:intron 25.0%
!! CCATAGTGAATTTTCATTTT+AGG + chr2.1:11266176-11266195 None:intergenic 25.0%
!! TACTCCTAAGAATGTTATTT+AGG - chr2.1:11265583-11265602 MS.gene055849:intron 25.0%
!! TGCTAATTTTAAGCAATCTT+TGG - chr2.1:11266574-11266593 MS.gene055849:intron 25.0%
!! TGCTGGATTATGTTAATTTT+TGG - chr2.1:11267332-11267351 MS.gene055849:CDS 25.0%
!! TTACTAAAATCTTTTAGTGG+TGG - chr2.1:11266996-11267015 MS.gene055849:intron 25.0%
!! TTTAATTGTAGCTCTGTAAT+TGG - chr2.1:11267248-11267267 MS.gene055849:CDS 25.0%
!!! ATAATAAAAAGGCGTCTATA+TGG - chr2.1:11266037-11266056 MS.gene055849:intron 25.0%
!!! TTTTTGTTGAGAAAAGTATC+CGG - chr2.1:11265547-11265566 MS.gene055849:intron 25.0%
AATAGTCTGATACTTCTCAA+AGG + chr2.1:11266804-11266823 None:intergenic 30.0%
AATATTTGGTCCACAATACA+AGG - chr2.1:11267020-11267039 MS.gene055849:intron 30.0%
AATCATAATAGTAGCAGTAG+CGG + chr2.1:11263884-11263903 None:intergenic 30.0%
ACCAAGACTTCAATAATGTT+AGG - chr2.1:11266641-11266660 MS.gene055849:intron 30.0%
ACCTAACATTATTGAAGTCT+TGG + chr2.1:11266645-11266664 None:intergenic 30.0%
ACTGCTACTATTATGATTCT+TGG - chr2.1:11263886-11263905 MS.gene055849:intron 30.0%
AGTGCTAATTACATTCATCT+AGG - chr2.1:11264937-11264956 MS.gene055849:intron 30.0%
ATAAACTATATACTCTCACG+GGG + chr2.1:11265467-11265486 None:intergenic 30.0%
ATAAGCAAGCTGTATTACTT+TGG - chr2.1:11264207-11264226 MS.gene055849:intron 30.0%
ATCAGAATATATTACACCTG+AGG - chr2.1:11266778-11266797 MS.gene055849:intron 30.0%
ATCTTTGGATGTTCTAATGA+TGG - chr2.1:11266589-11266608 MS.gene055849:intron 30.0%
ATGAAAATATTTCCAAGGGA+TGG - chr2.1:11265426-11265445 MS.gene055849:intron 30.0%
CAGTGATCAGTTGAATTTAA+TGG - chr2.1:11265268-11265287 MS.gene055849:CDS 30.0%
CATATAGTTAGGGACTAAAT+TGG + chr2.1:11264461-11264480 None:intergenic 30.0%
CTTAGCAACTAGATGATAAA+TGG + chr2.1:11265296-11265315 None:intergenic 30.0%
GAGAGAATTGAAACTTCATA+CGG - chr2.1:11263798-11263817 MS.gene055849:intron 30.0%
GCATAAAATATTTAGGCTTC+TGG - chr2.1:11267042-11267061 MS.gene055849:intron 30.0%
GCTAGAGTTATTTGATAGAT+AGG - chr2.1:11266136-11266155 MS.gene055849:intron 30.0%
GGTGTAATATATTCTGATAC+TGG + chr2.1:11266776-11266795 None:intergenic 30.0%
GTAATCATAACTTGATCATG+TGG - chr2.1:11267397-11267416 MS.gene055849:CDS 30.0%
GTGTTACACATGTTCATTAT+AGG - chr2.1:11266342-11266361 MS.gene055849:intron 30.0%
TAGTTTAGGGACTAAATTGA+TGG - chr2.1:11264632-11264651 MS.gene055849:intron 30.0%
TATATTCTGATACTGGCATA+TGG + chr2.1:11266769-11266788 None:intergenic 30.0%
TGAAAATATTTCCAAGGGAT+GGG - chr2.1:11265427-11265446 MS.gene055849:intron 30.0%
TGCTAAGCATTTAGTACATA+TGG - chr2.1:11265309-11265328 MS.gene055849:CDS 30.0%
TTGCATGTCTACATTATTCT+TGG - chr2.1:11265494-11265513 MS.gene055849:intron 30.0%
TTTATTGGGATTTGAGCATA+CGG - chr2.1:11266296-11266315 MS.gene055849:intron 30.0%
TTTGCAATGTTAAGACATCA+AGG - chr2.1:11265700-11265719 MS.gene055849:intron 30.0%
! ACTTCAATAATGTTAGGTTG+TGG - chr2.1:11266647-11266666 MS.gene055849:intron 30.0%
! ACTTGTACTGTTTGATAGTA+TGG - chr2.1:11266241-11266260 MS.gene055849:intron 30.0%
! ATCACTGCAAACTTTTTAAC+TGG + chr2.1:11265255-11265274 None:intergenic 30.0%
! ATGAAAGGAATGTATTTTGC+TGG - chr2.1:11266895-11266914 MS.gene055849:intron 30.0%
! CAATGATAAGTTGAATTGAG+TGG - chr2.1:11264274-11264293 MS.gene055849:CDS 30.0%
! CTCCTAAGAATGTTATTTAG+GGG - chr2.1:11265585-11265604 MS.gene055849:intron 30.0%
! CTTCAATAATGTTAGGTTGT+GGG - chr2.1:11266648-11266667 MS.gene055849:intron 30.0%
! CTTTTAGTGGTGGTAATATT+TGG - chr2.1:11267006-11267025 MS.gene055849:intron 30.0%
! GACGTATTTTGCATTGTTTA+GGG - chr2.1:11264559-11264578 MS.gene055849:CDS 30.0%
! TAGGAAATCTTTTAGTACCT+AGG + chr2.1:11265375-11265394 None:intergenic 30.0%
! TCCTAAGAATGTTATTTAGG+GGG - chr2.1:11265586-11265605 MS.gene055849:intron 30.0%
! TGACGTATTTTGCATTGTTT+AGG - chr2.1:11264558-11264577 MS.gene055849:CDS 30.0%
! TTCAATAATGTTAGGTTGTG+GGG - chr2.1:11266649-11266668 MS.gene055849:intron 30.0%
!! TTTGAGAAGTATCAGACTAT+TGG - chr2.1:11266803-11266822 MS.gene055849:intron 30.0%
!!! CTTGGAAATGTTTTGAAGTT+TGG - chr2.1:11265512-11265531 MS.gene055849:intron 30.0%
!!! TTTTGTTGAGAAAAGTATCC+GGG - chr2.1:11265548-11265567 MS.gene055849:intron 30.0%
AAAATATTTAGGCTTCTGGC+TGG - chr2.1:11267046-11267065 MS.gene055849:intron 35.0%
AAGGACATCTAATCCTGATT+TGG + chr2.1:11266501-11266520 None:intergenic 35.0%
AATTGTGAAGACAATGGAGA+AGG - chr2.1:11266685-11266704 MS.gene055849:intron 35.0%
ACATCAATATGAAATGTCGG+TGG - chr2.1:11264123-11264142 MS.gene055849:intron 35.0%
ACATTATTGAAGTCTTGGTG+AGG + chr2.1:11266640-11266659 None:intergenic 35.0%
AGGAGATGTGATTTACTTGA+CGG - chr2.1:11264957-11264976 MS.gene055849:intron 35.0%
ATGCTGCTAACTGCTAATTA+TGG + chr2.1:11267202-11267221 None:intergenic 35.0%
ATGTTCATTATAGGGTTGAG+TGG - chr2.1:11266351-11266370 MS.gene055849:intron 35.0%
ATTATCACTGACGTAAGTGT+TGG + chr2.1:11264041-11264060 None:intergenic 35.0%
ATTGTCTTCACAATTTGGTC+AGG + chr2.1:11266680-11266699 None:intergenic 35.0%
CAAGGAAATGAAGTCTGATA+GGG + chr2.1:11263659-11263678 None:intergenic 35.0%
CATTATTGAAGTCTTGGTGA+GGG + chr2.1:11266639-11266658 None:intergenic 35.0%
CGGGAATTAATCTGAAAGTT+TGG - chr2.1:11266316-11266335 MS.gene055849:intron 35.0%
CTTGATCAGGTAAATCATCA+CGG + chr2.1:11265818-11265837 None:intergenic 35.0%
GAAGAGAGACTGATAGTTTA+GGG - chr2.1:11264619-11264638 MS.gene055849:intron 35.0%
GGGGCCAAGTTATATTATTA+AGG - chr2.1:11266372-11266391 MS.gene055849:intron 35.0%
GTGATGATTTACCTGATCAA+GGG - chr2.1:11265817-11265836 MS.gene055849:intron 35.0%
TAAACTATATACTCTCACGG+GGG + chr2.1:11265466-11265485 None:intergenic 35.0%
TAGCTCAAAGCATAGTTTCA+TGG - chr2.1:11265036-11265055 MS.gene055849:intron 35.0%
TAGTGTAACTACATGTGTGT+CGG - chr2.1:11264081-11264100 MS.gene055849:intron 35.0%
TCAAAGTTCAGGGACTAAAT+TGG + chr2.1:11264430-11264449 None:intergenic 35.0%
TCAAGGAAATGAAGTCTGAT+AGG + chr2.1:11263660-11263679 None:intergenic 35.0%
TCCAGCATGCAACAATTAAA+AGG + chr2.1:11267319-11267338 None:intergenic 35.0%
TCCCCCTAAATAACATTCTT+AGG + chr2.1:11265590-11265609 None:intergenic 35.0%
TCTCCATTGTCTTCACAATT+TGG + chr2.1:11266685-11266704 None:intergenic 35.0%
TGAAGAGAGACTGATAGTTT+AGG - chr2.1:11264618-11264637 MS.gene055849:intron 35.0%
TGACCAAATTGTGAAGACAA+TGG - chr2.1:11266679-11266698 MS.gene055849:intron 35.0%
TGATAGATAGGTGAATTAGG+TGG - chr2.1:11266148-11266167 MS.gene055849:intron 35.0%
TGATCATGTGGTATGAATGA+TGG - chr2.1:11267409-11267428 MS.gene055849:CDS 35.0%
TGCTGCTAACTGCTAATTAT+GGG + chr2.1:11267201-11267220 None:intergenic 35.0%
TGCTTATAATAGTGACCGAA+GGG + chr2.1:11264332-11264351 None:intergenic 35.0%
TGGGCATGGGTATAATAAAA+AGG - chr2.1:11266026-11266045 MS.gene055849:intron 35.0%
TGTTCATTATAGGGTTGAGT+GGG - chr2.1:11266352-11266371 MS.gene055849:intron 35.0%
TTATTGGGATTTGAGCATAC+GGG - chr2.1:11266297-11266316 MS.gene055849:intron 35.0%
TTGAAGTTCGGATTTCAAAC+TGG - chr2.1:11265076-11265095 MS.gene055849:intron 35.0%
TTGCTTATAATAGTGACCGA+AGG + chr2.1:11264333-11264352 None:intergenic 35.0%
TTTCAGTTAGAGCTAGTAGT+GGG - chr2.1:11266061-11266080 MS.gene055849:intron 35.0%
! AATCCATGATTGACTCAGAT+CGG - chr2.1:11267524-11267543 MS.gene055849:CDS 35.0%
! ATCGATTCCTTCATCCATTT+CGG + chr2.1:11263739-11263758 None:intergenic 35.0%
! TATTTTCTTTACCCATCCCT+TGG + chr2.1:11265441-11265460 None:intergenic 35.0%
! TTTTCAGTTAGAGCTAGTAG+TGG - chr2.1:11266060-11266079 MS.gene055849:intron 35.0%
!! CAATTCAGTTCTAAATCCCA+CGG - chr2.1:11264893-11264912 MS.gene055849:intron 35.0%
!! TCCTTTTAATTGTTGCATGC+TGG - chr2.1:11267315-11267334 MS.gene055849:CDS 35.0%
AAATGAAGTCTGATAGGGAC+GGG + chr2.1:11263654-11263673 None:intergenic 40.0%
AAATGCTGAGTGTGTAGAGA+AGG - chr2.1:11266472-11266491 MS.gene055849:intron 40.0%
AAGGCTTCTATCAGTATGCT+AGG + chr2.1:11265888-11265907 None:intergenic 40.0%
AATATGAAATGTCGGTGGCT+TGG - chr2.1:11264128-11264147 MS.gene055849:intron 40.0%
AATTGCTTCAGCCACATTAG+TGG + chr2.1:11265754-11265773 None:intergenic 40.0%
ACCAACACTCTCCCATATTA+GGG + chr2.1:11263843-11263862 None:intergenic 40.0%
ACTTCATACGGTTTGTGAAG+AGG - chr2.1:11263810-11263829 MS.gene055849:intron 40.0%
AGCATACTGATAGAAGCCTT+AGG - chr2.1:11265888-11265907 MS.gene055849:intron 40.0%
ATGCGCATACACACACATTA+AGG - chr2.1:11265121-11265140 MS.gene055849:intron 40.0%
ATTGCTTCAGCCACATTAGT+GGG + chr2.1:11265753-11265772 None:intergenic 40.0%
ATTGTTATGCCGATGAGTGA+AGG - chr2.1:11264855-11264874 MS.gene055849:intron 40.0%
ATTTGTCCGGGTGAAAACTA+TGG + chr2.1:11264302-11264321 None:intergenic 40.0%
CAGTAGTTAGATACATCCTC+TGG + chr2.1:11264710-11264729 None:intergenic 40.0%
CGTGATGATTTACCTGATCA+AGG - chr2.1:11265816-11265835 MS.gene055849:intron 40.0%
CTGAACAAGTGGTTGAAGTT+CGG - chr2.1:11265064-11265083 MS.gene055849:intron 40.0%
GAAATGAAGTCTGATAGGGA+CGG + chr2.1:11263655-11263674 None:intergenic 40.0%
GGAGTAAGAAATCGTAATCC+CGG + chr2.1:11265569-11265588 None:intergenic 40.0%
GGGTCATGAATGTGAAATGA+AGG - chr2.1:11266087-11266106 MS.gene055849:intron 40.0%
GGTGAGATTCTGTGGAAATT+CGG + chr2.1:11263602-11263621 None:intergenic 40.0%
GTAAGTACTCCTAAAACCAG+TGG - chr2.1:11265611-11265630 MS.gene055849:intron 40.0%
GTAGAGAAGGTTTCCAAATC+AGG - chr2.1:11266485-11266504 MS.gene055849:intron 40.0%
GTCTATAGCATTTATTCCCG+TGG - chr2.1:11266840-11266859 MS.gene055849:intron 40.0%
GTGATAGGGATTTCGATATG+TGG - chr2.1:11267450-11267469 MS.gene055849:CDS 40.0%
GTTCATTATAGGGTTGAGTG+GGG - chr2.1:11266353-11266372 MS.gene055849:intron 40.0%
TCAGACTATTGGCATGGAAA+TGG - chr2.1:11266814-11266833 MS.gene055849:intron 40.0%
TCATGGAACAACTGAACAAG+TGG - chr2.1:11265053-11265072 MS.gene055849:intron 40.0%
TCCAAAACCGAAATGGATGA+AGG - chr2.1:11263729-11263748 MS.gene055849:intron 40.0%
TGCATAATCTAGTGCACTCA+TGG - chr2.1:11264990-11265009 MS.gene055849:intron 40.0%
TTAGAGCAACAATCGTCACA+TGG + chr2.1:11266422-11266441 None:intergenic 40.0%
TTAGGGACTAAATTGGTGAG+AGG + chr2.1:11264454-11264473 None:intergenic 40.0%
TTGGTTACAATAGTGACCAG+AGG - chr2.1:11264691-11264710 MS.gene055849:intron 40.0%
! AGTCCCTAGTATTGAGATTG+CGG - chr2.1:11264495-11264514 MS.gene055849:CDS 40.0%
! ATCCATGATTGACTCAGATC+GGG - chr2.1:11267525-11267544 MS.gene055849:CDS 40.0%
! GAAGTATCAGACTATTGGCA+TGG - chr2.1:11266808-11266827 MS.gene055849:intron 40.0%
! GGTGAAAGAGAAAGGTTTTG+TGG + chr2.1:11263545-11263564 None:intergenic 40.0%
! TCCTTCATCCATTTCGGTTT+TGG + chr2.1:11263733-11263752 None:intergenic 40.0%
!! CAAGCCTTAGTTTGCTAGAT+GGG - chr2.1:11266007-11266026 MS.gene055849:intron 40.0%
!! GAAAGAGAAAGGTTTTGTGG+TGG + chr2.1:11263542-11263561 None:intergenic 40.0%
!! GGTGTTGATGTGATGACATT+TGG - chr2.1:11266719-11266738 MS.gene055849:intron 40.0%
!! TCAAGCCTTAGTTTGCTAGA+TGG - chr2.1:11266006-11266025 MS.gene055849:intron 40.0%
!! TTAGTTTGCTAGATGGGCAT+GGG - chr2.1:11266013-11266032 MS.gene055849:intron 40.0%
!!! AAGGTTTTGTGGTGGATTTG+AGG + chr2.1:11263534-11263553 None:intergenic 40.0%
!!! ACACAACTTCCACTGGTTTT+AGG + chr2.1:11265623-11265642 None:intergenic 40.0%
!!! ATCCATTTCGGTTTTGGAAG+CGG + chr2.1:11263727-11263746 None:intergenic 40.0%
!!! GGATTTGAGGTTTTTAGCGA+CGG + chr2.1:11263521-11263540 None:intergenic 40.0%
AAACCAGTGGAAGTTGTGTG+TGG - chr2.1:11265624-11265643 MS.gene055849:intron 45.0%
AACGCGTACTCTGTTGAAGT+CGG - chr2.1:11263688-11263707 MS.gene055849:intron 45.0%
AATGAAGTCTGATAGGGACG+GGG + chr2.1:11263653-11263672 None:intergenic 45.0%
AGATTGCGGGACCAAATTGA+TGG - chr2.1:11264509-11264528 MS.gene055849:CDS 45.0%
ATACTTGTACTCGAGGTTGC+AGG - chr2.1:11263911-11263930 MS.gene055849:intron 45.0%
ATCCGCTTCCAAAACCGAAA+TGG - chr2.1:11263722-11263741 MS.gene055849:intron 45.0%
ATCGTGGGGTTTGGATTATG+TGG - chr2.1:11265776-11265795 MS.gene055849:intron 45.0%
ATTCCACACACAACTTCCAC+TGG + chr2.1:11265630-11265649 None:intergenic 45.0%
CACTCATGGATTCTAAGCTG+TGG - chr2.1:11265004-11265023 MS.gene055849:intron 45.0%
CATGCCCATCTAGCAAACTA+AGG + chr2.1:11266014-11266033 None:intergenic 45.0%
CTCAGCATTTCCTCGAAAGT+CGG + chr2.1:11266462-11266481 None:intergenic 45.0%
CTGTCTCAACATTATGCGCA+AGG + chr2.1:11266520-11266539 None:intergenic 45.0%
GACCAACACTCTCCCATATT+AGG + chr2.1:11263844-11263863 None:intergenic 45.0%
GAGATTCTGTGGAAATTCGG+AGG + chr2.1:11263599-11263618 None:intergenic 45.0%
GATTTACCTGATCAAGGGAG+CGG - chr2.1:11265822-11265841 MS.gene055849:intron 45.0%
GATTTCGATATGTGGCATCC+GGG - chr2.1:11267458-11267477 MS.gene055849:CDS 45.0%
GGACAAATGTGTACACCCTT+CGG - chr2.1:11264314-11264333 MS.gene055849:CDS 45.0%
GGATGTTCTAATGATGGCCA+AGG - chr2.1:11266595-11266614 MS.gene055849:intron 45.0%
GGATTTCGATATGTGGCATC+CGG - chr2.1:11267457-11267476 MS.gene055849:CDS 45.0%
GGTGAGAGGTTCAAAGTTCA+GGG + chr2.1:11264440-11264459 None:intergenic 45.0%
GTACGCGTTGTTCGATTTCA+AGG + chr2.1:11263677-11263696 None:intergenic 45.0%
GTACTGCAACCTTCACTCAT+CGG + chr2.1:11264867-11264886 None:intergenic 45.0%
GTCCCGCAATCTCAATACTA+GGG + chr2.1:11264501-11264520 None:intergenic 45.0%
TAGTTCAGGGACTAAACCGA+TGG + chr2.1:11264396-11264415 None:intergenic 45.0%
TCACCATGCATGCGTAATCA+TGG - chr2.1:11267282-11267301 MS.gene055849:CDS 45.0%
TCAGCATTTCCTCGAAAGTC+GGG + chr2.1:11266461-11266480 None:intergenic 45.0%
TCAGGGACTAAATTGGTGAG+AGG + chr2.1:11264423-11264442 None:intergenic 45.0%
TGAAATGTAGTGTGGCGTGT+AGG - chr2.1:11264169-11264188 MS.gene055849:intron 45.0%
TGATACTGGCATATGGCGTT+TGG + chr2.1:11266762-11266781 None:intergenic 45.0%
TGATACTTCTCAAAGGCCTC+AGG + chr2.1:11266797-11266816 None:intergenic 45.0%
TGGTGAGAGGTTCAAAGTTC+AGG + chr2.1:11264441-11264460 None:intergenic 45.0%
! AAGGGTGTACACATTTGTCC+GGG + chr2.1:11264314-11264333 None:intergenic 45.0%
! ATGAAGGAATCGATTCCTGG+TGG - chr2.1:11263745-11263764 MS.gene055849:intron 45.0%
! CTTGGTGATACTTGTACTCG+AGG - chr2.1:11263904-11263923 MS.gene055849:intron 45.0%
! GAAGGGTGTACACATTTGTC+CGG + chr2.1:11264315-11264334 None:intergenic 45.0%
! GTCCCTAGTATTGAGATTGC+GGG - chr2.1:11264496-11264515 MS.gene055849:CDS 45.0%
! TGGATGAAGGAATCGATTCC+TGG - chr2.1:11263742-11263761 MS.gene055849:intron 45.0%
! TTAGAGCTAGTAGTGGGAGT+GGG - chr2.1:11266067-11266086 MS.gene055849:intron 45.0%
!! AATATGGGAGAGTGTTGGTC+TGG - chr2.1:11263844-11263863 MS.gene055849:intron 45.0%
!! CTTAGTTTGCTAGATGGGCA+TGG - chr2.1:11266012-11266031 MS.gene055849:intron 45.0%
!! GGTGAGAGGTTGATAGTTCA+GGG + chr2.1:11264409-11264428 None:intergenic 45.0%
!! TGGTGAGAGGTTGATAGTTC+AGG + chr2.1:11264410-11264429 None:intergenic 45.0%
AAATGACCGCTCCCTTGATC+AGG + chr2.1:11265831-11265850 None:intergenic 50.0%
ACGCGTACTCTGTTGAAGTC+GGG - chr2.1:11263689-11263708 MS.gene055849:intron 50.0%
ACTGGCATATGGCGTTTGGA+GGG + chr2.1:11266758-11266777 None:intergenic 50.0%
AGCAATTGCATCGTGGGGTT+TGG - chr2.1:11265767-11265786 MS.gene055849:intron 50.0%
AGCCCGATCTGAGTCAATCA+TGG + chr2.1:11267530-11267549 None:intergenic 50.0%
ATTCCCTTGCAAGACGAGCT+CGG + chr2.1:11263630-11263649 None:intergenic 50.0%
CAGCATTTCCTCGAAAGTCG+GGG + chr2.1:11266460-11266479 None:intergenic 50.0%
CTGTGGAAATTCGGAGGATG+AGG + chr2.1:11263593-11263612 None:intergenic 50.0%
GCGCATGCACATGTGTTACA+AGG + chr2.1:11265107-11265126 None:intergenic 50.0%
GCGTGTAGGTGTGTGCATAT+AGG - chr2.1:11264183-11264202 MS.gene055849:intron 50.0%
GCTGAAGCAATTGCATCGTG+GGG - chr2.1:11265762-11265781 MS.gene055849:intron 50.0%
GGCTGAAGCAATTGCATCGT+GGG - chr2.1:11265761-11265780 MS.gene055849:intron 50.0%
GGTCCCGCAATCTCAATACT+AGG + chr2.1:11264502-11264521 None:intergenic 50.0%
GTGCCATGATTACGCATGCA+TGG + chr2.1:11267288-11267307 None:intergenic 50.0%
GTTGCGGTGGTGAAAGAGAA+AGG + chr2.1:11263553-11263572 None:intergenic 50.0%
TACTGGCATATGGCGTTTGG+AGG + chr2.1:11266759-11266778 None:intergenic 50.0%
TCTATAGGAATGGGCCACCA+GGG + chr2.1:11267226-11267245 None:intergenic 50.0%
TGCACATACTTCCAACCACC+AGG + chr2.1:11263763-11263782 None:intergenic 50.0%
TGGAAATTCGGAGGATGAGG+CGG + chr2.1:11263590-11263609 None:intergenic 50.0%
TGGCTGAAGCAATTGCATCG+TGG - chr2.1:11265760-11265779 MS.gene055849:intron 50.0%
! AGAGGCGAAGTGCCCTAATA+TGG - chr2.1:11263828-11263847 MS.gene055849:intron 50.0%
! AGGAATCGATTCCTGGTGGT+TGG - chr2.1:11263749-11263768 MS.gene055849:intron 50.0%
! GAGGCGAAGTGCCCTAATAT+GGG - chr2.1:11263829-11263848 MS.gene055849:intron 50.0%
! GCCCTAATATGGGAGAGTGT+TGG - chr2.1:11263839-11263858 MS.gene055849:intron 50.0%
! GGTGGTTGTTGTTGTGGTTG+CGG + chr2.1:11263569-11263588 None:intergenic 50.0%
! GTGGCTCCATAGTTTTCACC+CGG - chr2.1:11264293-11264312 MS.gene055849:CDS 50.0%
! GTGTTGGTCTGGTGGTGAAA+CGG - chr2.1:11263855-11263874 MS.gene055849:intron 50.0%
! GTTAGAGCTAGTAGTGGGAG+TGG - chr2.1:11266066-11266085 MS.gene055849:intron 50.0%
! TGTTGGTCTGGTGGTGAAAC+GGG - chr2.1:11263856-11263875 MS.gene055849:intron 50.0%
!! AAGAGCTACAGAGTGCTGTG+CGG - chr2.1:11266543-11266562 MS.gene055849:intron 50.0%
!! CCACATTAGTGGGCTCATCA+GGG + chr2.1:11265743-11265762 None:intergenic 50.0%
AAATTCGGAGGATGAGGCGG+TGG + chr2.1:11263587-11263606 None:intergenic 55.0%
AACTCCGAGCTCGTCTTGCA+AGG - chr2.1:11263623-11263642 MS.gene055849:intron 55.0%
ACTCCGAGCTCGTCTTGCAA+GGG - chr2.1:11263624-11263643 MS.gene055849:intron 55.0%
ATGGAGAAGGTGAGAGCAGC+AGG - chr2.1:11266698-11266717 MS.gene055849:intron 55.0%
CCCTGATGAGCCCACTAATG+TGG - chr2.1:11265740-11265759 MS.gene055849:intron 55.0%
CTCTATAGGAATGGGCCACC+AGG + chr2.1:11267227-11267246 None:intergenic 55.0%
TAGCAGTTAGCAGCATGCCC+TGG - chr2.1:11267206-11267225 MS.gene055849:CDS 55.0%
TGCAAGACGAGCTCGGAGTT+CGG + chr2.1:11263623-11263642 None:intergenic 55.0%
! CGGAGTTCGGTGAGATTCTG+TGG + chr2.1:11263610-11263629 None:intergenic 55.0%
! GGTTGTTGTTGTGGTTGCGG+TGG + chr2.1:11263566-11263585 None:intergenic 55.0%
! TGAGGCGGTGGTTGTTGTTG+TGG + chr2.1:11263575-11263594 None:intergenic 55.0%
!! AGAGCTACAGAGTGCTGTGC+GGG - chr2.1:11266544-11266563 MS.gene055849:intron 55.0%
!! ATGGGAGAGTGTTGGTCTGG+TGG - chr2.1:11263847-11263866 MS.gene055849:intron 55.0%
!! GCCACATTAGTGGGCTCATC+AGG + chr2.1:11265744-11265763 None:intergenic 55.0%
!! TTAGTGGGCTCATCAGGGTC+AGG + chr2.1:11265738-11265757 None:intergenic 55.0%
ATATGTGGCATCCGGGCCCA+TGG - chr2.1:11267465-11267484 MS.gene055849:CDS 60.0%
CAGTTAGCAGCATGCCCTGG+TGG - chr2.1:11267209-11267228 MS.gene055849:CDS 60.0%
GCAACAGTCCCCGACTTTCG+AGG - chr2.1:11266449-11266468 MS.gene055849:intron 60.0%
GCCAAGGATTATGCCCCTGC+GGG - chr2.1:11266611-11266630 MS.gene055849:intron 60.0%
GGCCAAGGATTATGCCCCTG+CGG - chr2.1:11266610-11266629 MS.gene055849:intron 60.0%
TCTTGGTGAGGGTTCCCGCA+GGG + chr2.1:11266628-11266647 None:intergenic 60.0%
! TCATCAGGGTCAGGTGGTGG+AGG + chr2.1:11265729-11265748 None:intergenic 60.0%
! TCCCGCAGGGGCATAATCCT+TGG + chr2.1:11266615-11266634 None:intergenic 60.0%
CTTGGTGAGGGTTCCCGCAG+GGG + chr2.1:11266627-11266646 None:intergenic 65.0%
GGCTCATCAGGGTCAGGTGG+TGG + chr2.1:11265732-11265751 None:intergenic 65.0%
GTCTTGGTGAGGGTTCCCGC+AGG + chr2.1:11266629-11266648 None:intergenic 65.0%
GTGGGCTCATCAGGGTCAGG+TGG + chr2.1:11265735-11265754 None:intergenic 65.0%
TGGCATCCGGGCCCATGGTA+AGG - chr2.1:11267470-11267489 MS.gene055849:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 11263496 11267567 11263496 ID=MS.gene055849
chr2.1 mRNA 11263496 11267567 11263496 ID=MS.gene055849.t1;Parent=MS.gene055849
chr2.1 exon 11267131 11267567 11267131 ID=MS.gene055849.t1.exon1;Parent=MS.gene055849.t1
chr2.1 CDS 11267131 11267567 11267131 ID=cds.MS.gene055849.t1;Parent=MS.gene055849.t1
chr2.1 exon 11265154 11265365 11265154 ID=MS.gene055849.t1.exon2;Parent=MS.gene055849.t1
chr2.1 CDS 11265154 11265365 11265154 ID=cds.MS.gene055849.t1;Parent=MS.gene055849.t1
chr2.1 exon 11264228 11264607 11264228 ID=MS.gene055849.t1.exon3;Parent=MS.gene055849.t1
chr2.1 CDS 11264228 11264607 11264228 ID=cds.MS.gene055849.t1;Parent=MS.gene055849.t1
chr2.1 exon 11263496 11263606 11263496 ID=MS.gene055849.t1.exon4;Parent=MS.gene055849.t1
chr2.1 CDS 11263496 11263606 11263496 ID=cds.MS.gene055849.t1;Parent=MS.gene055849.t1
Gene Sequence

>MS.gene055849

ATGATGTACTCACGGTTCAGAACCGTCGCTAAAAACCTCAAATCCACCACAAAACCTTTCTCTTTCACCACCGCAACCACAACAACAACCACCGCCTCATCCTCCGAATTTCCACAGAATCTCACCGAACTCCGAGCTCGTCTTGCAAGGGAATCCCCGTCCCTATCAGACTTCATTTCCTTGAAATCGAACAACGCGTACTCTGTTGAAGTCGGGACGAAGAAGAATCCGCTTCCAAAACCGAAATGGATGAAGGAATCGATTCCTGGTGGTTGGAAGTATGTGCAGATTAAGAAGAAACTGAGAGAATTGAAACTTCATACGGTTTGTGAAGAGGCGAAGTGCCCTAATATGGGAGAGTGTTGGTCTGGTGGTGAAACGGGTACCGCTACTGCTACTATTATGATTCTTGGTGATACTTGTACTCGAGGTTGCAGGTTATACGCCAATCAATTTTTCAATTTTCGCAATTTTATGTTGTTTTAGTATTCAAAATTTGGGAGTTTAGTTTTATAGATAAATTAAACTATGAAGCATGGATGCCAACACTTACGTCAGTGATAATTTGAGAAAATGAAAGTGATCTAGTGTAACTACATGTGTGTCGGATGTTGCACATACGATATGACATCAATATGAAATGTCGGTGGCTTGGTGCTACATTAAATAGATTTGAAATGTAGTGTGGCGTGTAGGTGTGTGCATATAGGTATAAGCAAGCTGTATTACTTTGGTAGTTTAGCTTGTTCTGTTGAAATTATGTCAGCTCAATAGTTTGCAATGATAAGTTGAATTGAGTGGCTCCATAGTTTTCACCCGGACAAATGTGTACACCCTTCGGTCACTATTATAAGCAAAAAAACCACTTTTTAGATTAATTGAATAACTGAAAAAAAACCATCGGTTTAGTCCCTGAACTATCAACCTCTCACCAATTTAGTCCCTGAACTTTGAACCTCTCACCAATTTAGTCCCTAACTATATGAAATACATCAATTTAGTCCCTAGTATTGAGATTGCGGGACCAAATTGATGGATTTTCATATACTTTATGGACTAAATTGACGTATTTTGCATTGTTTAGGGACTATTTAGAATATTTTTATAGTTTAGGGACTAAGTTGAAGAGAGACTGATAGTTTAGGGACTAAATTGATGGTTTATTCACTAACTGATGAATCTAAAAAATGGTTTTTTGGTTACAATAGTGACCAGAGGATGTATCTAACTACTGAATTTGTCATTGTTGAATAATGGATGAGAATGTTGATCAATTTCCTCCAAGTTTTATGTTTTTTTCATCTTTGAAATATAATCTCATCGAATGATATTGGAGCTCTAATACAATTCTGTTATGCAATTGTTATGCCGATGAGTGAAGGTTGCAGTACTCTGAACAATTCAGTTCTAAATCCCACGGATTTTTTTGCATAATTTAGTAAGTGCTAATTACATTCATCTAGGAGATGTGATTTACTTGACGGTACTTATGAATGCATAATCTAGTGCACTCATGGATTCTAAGCTGTGGTTTCTTTTATAGCTCAAAGCATAGTTTCATGGAACAACTGAACAAGTGGTTGAAGTTCGGATTTCAAACTGGTTTATCCTTGTAACACATGTGCATGCGCATACACACACATTAAGGATTTTCTCTTGTTCTTTGTGTGATTTCAATATAATTTATCTTACTTAAATTGTTATAAGCAAGTTGTAATACTTTGGTTGTTTACTGACTTGTTGTAATGAAATGATGCCAGTTAAAAAGTTTGCAGTGATCAGTTGAATTTAATGGCTCCATTTATCATCTAGTTGCTAAGCATTTAGTACATATGGTCATATTTTCATGTTCATTACAAGTTTAAACGAAATTATTCCTAGGTACTAAAAGATTTCCTAAAAATAAAAAAACTTCCATATTCTAATTCTAATGAAAATATTTCCAAGGGATGGGTAAAGAAAATAAACCCCCGTGAGAGTATATAGTTTATTTTTAATTTGCATGTCTACATTATTCTTGGAAATGTTTTGAAGTTTGGCTACACTTTTTTTTTTTGTTGAGAAAAGTATCCGGGATTACGATTTCTTACTCCTAAGAATGTTATTTAGGGGGATGTAAGTACTCCTAAAACCAGTGGAAGTTGTGTGTGGAATTTTTATGTTAGAACACTATAAATAAAATGAATTTATGTTATTTTTCAGATTTTGCAATGTTAAGACATCAAGGACTCCTCCACCACCTGACCCTGATGAGCCCACTAATGTGGCTGAAGCAATTGCATCGTGGGGTTTGGATTATGTGGTTATAACAAGCGTTGACCGTGATGATTTACCTGATCAAGGGAGCGGTCATTTTACTGAAACAGTTCAGAAGCTGAAGATACTGAAACCTAGCATACTGATAGAAGCCTTAGGTATGCATTTTGAATATATGTAGTTCCCGAAAATAGATTAATGTGATAATTTGTGAGAACATCATGTTCTAACTTCTATCTAATAGTAAACAACGATCAAGCCTTAGTTTGCTAGATGGGCATGGGTATAATAAAAAGGCGTCTATATGGTTTTCAGTTAGAGCTAGTAGTGGGAGTGGGTCATGAATGTGAAATGAAGGACTATCTTTTGTGAGTTTCTTTTTCAGCTAGAGTTATTTGATAGATAGGTGAATTAGGTGGTACCTAAAATGAAAATTCACTATGGAGTTTCTGTTGATGAATTTCTCTTTCGCTGCTGTTTACTATTGTGACTTGTACTGTTTGATAGTATGGCTTTTAATCAGAACTAAAAAAAAAAAAACATGTTTATTGGGATTTGAGCATACGGGAATTAATCTGAAAGTTTGGTTTGTGTTACACATGTTCATTATAGGGTTGAGTGGGGCCAAGTTATATTATTAAGGAGACTTCACTCAAAATAAATTTCTCCATGTGACGATTGTTGCTCTAATTTTGTTGCAACAGTCCCCGACTTTCGAGGAAATGCTGAGTGTGTAGAGAAGGTTTCCAAATCAGGATTAGATGTCCTTGCGCATAATGTTGAGACAGTTGAAGAGCTACAGAGTGCTGTGCGGGATCACCGTGCTAATTTTAAGCAATCTTTGGATGTTCTAATGATGGCCAAGGATTATGCCCCTGCGGGAACCCTCACCAAGACTTCAATAATGTTAGGTTGTGGGGAAACACCTGACCAAATTGTGAAGACAATGGAGAAGGTGAGAGCAGCAGGTGTTGATGTGATGACATTTGGTCAGTATATGAGACCCTCCAAACGCCATATGCCAGTATCAGAATATATTACACCTGAGGCCTTTGAGAAGTATCAGACTATTGGCATGGAAATGGTATGTCTATAGCATTTATTCCCGTGGTTCTGATTTTTTTATATTTTATTTATTTGTAGATGAAAGGAATGTATTTTGCTGGATGAAAAATAATTACTATTAGCATCCAAAGCTGTTATAATTTTGTTGGCATTCTCGTAATCATGCTTTTAGTCAGCATTTACTAAAATCTTTTAGTGGTGGTAATATTTGGTCCACAATACAAGGCATAAAATATTTAGGCTTCTGGCTGGTATTTATAATTTTGTATGTGTTTCTCAAAAGTTGATGCAGATAAAGTCATTTTCAGCATCGCTCTTGCATATTCAGTCAGTGTAAAGTAATATGTCTTGCTAATCCATATTAAATGTGGCCTTTTTTATCCCATAATTAGCAGTTAGCAGCATGCCCTGGTGGCCCATTCCTATAGAGATTTAATTGTAGCTCTGTAATTGGCATTTTGTACATCACCATGCATGCGTAATCATGGCACGTTTTTCTCCTTTTAATTGTTGCATGCTGGATTATGTTAATTTTTGGAAAAGCTCTAATTTATTAAGAACTTTTTGTAGCAGTATAGCAGTAATCATAACTTGATCATGTGGTATGAATGATGGACTAATTCTACTTTGTATGTGATAGGGATTTCGATATGTGGCATCCGGGCCCATGGTAAGGTCATCATACAAGGCAGGTGAATTCTATATTAAATCCATGATTGACTCAGATCGGGCTGTATCTTCTCAAAGCTGA

Protein sequence

>MS.gene055849.t1

MMYSRFRTVAKNLKSTTKPFSFTTATTTTTTASSSEFPQNLTELRARLARESPSLSDFISLKSNNAYSVEVGTKKNPLPKPKWMKESIPGGWKYVQIKKKLRELKLHTVCEEAKCPNMGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRTPPPPDPDEPTNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFTETVQKLKILKPSILIEALVPDFRGNAECVEKVSKSGLDVLAHNVETVEELQSAVRDHRANFKQSLDVLMMAKDYAPAGTLTKTSIMLGCGETPDQIVKTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYQTIGMEMGFRYVASGPMVRSSYKAGEFYIKSMIDSDRAVSSQS