Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074443.t1 | XP_003627333.2 | 94.1 | 679 | 40 | 0 | 1 | 679 | 1 | 679 | 0.00E+00 | 1278.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074443.t1 | Q6NLG3 | 67.2 | 134 | 44 | 0 | 789 | 922 | 1 | 134 | 7.5e-47 | 190.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074443.t1 | G7L7M3 | 94.1 | 679 | 40 | 0 | 1 | 679 | 1 | 679 | 0.0e+00 | 1278.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051091 | MS.gene074443 | 0.946754 | 2.52E-105 | -1.69E-46 |
| MS.gene056525 | MS.gene074443 | 0.814171 | 1.76E-51 | -1.69E-46 |
| MS.gene059896 | MS.gene074443 | -0.80539 | 1.37E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074443.t1 | MTR_8g021230 | 94.421 | 717 | 40 | 0 | 1 | 717 | 1 | 717 | 0.0 | 1373 |
| MS.gene074443.t1 | MTR_8g021230 | 93.916 | 641 | 39 | 0 | 1 | 641 | 1 | 641 | 0.0 | 1216 |
| MS.gene074443.t1 | MTR_8g021230 | 93.471 | 582 | 38 | 0 | 1 | 582 | 1 | 582 | 0.0 | 1099 |
| MS.gene074443.t1 | MTR_8g021230 | 94.821 | 560 | 29 | 0 | 158 | 717 | 1 | 560 | 0.0 | 1067 |
| MS.gene074443.t1 | MTR_8g021230 | 94.215 | 484 | 28 | 0 | 158 | 641 | 1 | 484 | 0.0 | 910 |
| MS.gene074443.t1 | MTR_4g125080 | 49.798 | 741 | 360 | 7 | 1 | 737 | 1 | 733 | 0.0 | 696 |
| MS.gene074443.t1 | MTR_2g042570 | 48.091 | 707 | 353 | 7 | 1 | 700 | 1 | 700 | 0.0 | 660 |
| MS.gene074443.t1 | MTR_4g125080 | 53.528 | 581 | 267 | 2 | 1 | 579 | 1 | 580 | 0.0 | 630 |
| MS.gene074443.t1 | MTR_4g125080 | 47.359 | 587 | 299 | 6 | 153 | 737 | 5 | 583 | 1.16e-172 | 515 |
| MS.gene074443.t1 | MTR_8g021233 | 94.245 | 139 | 8 | 0 | 747 | 885 | 35 | 173 | 2.24e-85 | 273 |
| MS.gene074443.t1 | MTR_8g007235 | 34.074 | 135 | 86 | 1 | 784 | 918 | 3 | 134 | 4.57e-22 | 94.0 |
| MS.gene074443.t1 | MTR_4g104030 | 32.847 | 137 | 89 | 1 | 782 | 918 | 81 | 214 | 2.31e-20 | 91.7 |
| MS.gene074443.t1 | MTR_8g099450 | 31.159 | 138 | 92 | 1 | 780 | 917 | 81 | 215 | 2.94e-17 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074443.t1 | AT1G19110 | 50.142 | 706 | 340 | 5 | 1 | 699 | 1 | 701 | 0.0 | 699 |
| MS.gene074443.t1 | AT1G72500 | 48.505 | 736 | 362 | 6 | 1 | 721 | 1 | 734 | 0.0 | 687 |
| MS.gene074443.t1 | AT1G72500 | 51.974 | 608 | 289 | 2 | 1 | 605 | 1 | 608 | 0.0 | 637 |
| MS.gene074443.t1 | AT1G72500 | 52.144 | 583 | 276 | 2 | 1 | 580 | 1 | 583 | 0.0 | 610 |
| MS.gene074443.t1 | AT1G17410 | 65.278 | 144 | 50 | 0 | 779 | 922 | 28 | 171 | 1.44e-60 | 204 |
| MS.gene074443.t1 | AT1G17410 | 67.164 | 134 | 44 | 0 | 789 | 922 | 1 | 134 | 1.13e-57 | 194 |
| MS.gene074443.t1 | AT1G17410 | 67.708 | 96 | 31 | 0 | 789 | 884 | 1 | 96 | 6.30e-40 | 144 |
| MS.gene074443.t1 | AT5G63310 | 36.496 | 137 | 84 | 1 | 782 | 918 | 82 | 215 | 5.28e-23 | 99.4 |
| MS.gene074443.t1 | AT4G09320 | 33.582 | 134 | 86 | 1 | 783 | 916 | 1 | 131 | 3.98e-22 | 94.0 |
| MS.gene074443.t1 | AT4G11010 | 31.646 | 158 | 104 | 2 | 761 | 917 | 65 | 219 | 3.60e-19 | 88.2 |
| MS.gene074443.t1 | AT4G23900 | 30.488 | 164 | 110 | 2 | 755 | 917 | 58 | 218 | 1.66e-18 | 86.3 |
| MS.gene074443.t1 | AT4G23895 | 30.488 | 164 | 110 | 2 | 755 | 917 | 288 | 448 | 2.00e-17 | 86.7 |
Find 194 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGATGCCGTTTATGATTT+AGG | 0.173545 | 8.2:-73769604 | MS.gene074443:intron |
| GAATCTTAACAATGTATATT+TGG | 0.174409 | 8.2:+73771549 | None:intergenic |
| CCTGAACCTGTCAAGGTTAC+TGG | 0.196671 | 8.2:-73768935 | MS.gene074443:CDS |
| TATCTCTCTTTGTGCAGATT+TGG | 0.258721 | 8.2:+73760840 | None:intergenic |
| ACTGTAGATGGTTCCATCTT+TGG | 0.265622 | 8.2:+73770318 | None:intergenic |
| TGCTGATTGGCGCGCTTTGA+TGG | 0.267455 | 8.2:-73761046 | MS.gene074443:CDS |
| ATCTCTCTTTGTGCAGATTT+GGG | 0.271587 | 8.2:+73760841 | None:intergenic |
| ACACCCCGCATTTGTACTTT+TGG | 0.274066 | 8.2:-73769854 | MS.gene074443:CDS |
| TCTGATCTTAACTGAGAAAA+TGG | 0.279654 | 8.2:+73771411 | None:intergenic |
| CATTCTGTCTTTCAGTTTAA+GGG | 0.282341 | 8.2:-73771439 | MS.gene074443:intron |
| TCCATGTTCTTGTAGACTTT+CGG | 0.283183 | 8.2:-73763240 | MS.gene074443:intron |
| AACAGCATCAGAGCAAAATA+TGG | 0.291545 | 8.2:-73760904 | MS.gene074443:intron |
| TGAAACATACCTTTCTATCT+TGG | 0.291596 | 8.2:+73770765 | None:intergenic |
| GGCTAACAGGGTTCACTTCT+AGG | 0.291976 | 8.2:-73771683 | MS.gene074443:intron |
| GTTTCTTCAAGTGACATATT+TGG | 0.298969 | 8.2:-73770869 | MS.gene074443:CDS |
| GAAATCCCAAAGTTATTTCT+TGG | 0.301433 | 8.2:-73767557 | MS.gene074443:CDS |
| AAAATTGCTTCCACTGTAGA+TGG | 0.320409 | 8.2:+73770306 | None:intergenic |
| ACCGGTGTTAGTCATGGTTT+TGG | 0.320603 | 8.2:-73761085 | MS.gene074443:CDS |
| TTAGAAATTGTTCTTCCAAC+AGG | 0.322142 | 8.2:+73771313 | None:intergenic |
| TTCTCCAGCTCCGTCGAATT+CGG | 0.322473 | 8.2:-73775117 | MS.gene074443:CDS |
| ATCACCATCAAAAGTTTAGA+AGG | 0.323197 | 8.2:-73769202 | MS.gene074443:CDS |
| CATCTTTGGCGAGAATAAAT+AGG | 0.325085 | 8.2:+73770332 | None:intergenic |
| CAACTTGTGCTAGCATTTGC+AGG | 0.336684 | 8.2:+73769638 | None:intergenic |
| GGTGTCGAGGTCAATGATTT+TGG | 0.341729 | 8.2:-73771662 | MS.gene074443:CDS |
| AATTAGAATTACCTGAGTTA+AGG | 0.346965 | 8.2:+73770221 | None:intergenic |
| AAACCATCTGAAGGACTATT+GGG | 0.347518 | 8.2:-73767464 | MS.gene074443:CDS |
| ATTAGAATTACCTGAGTTAA+GGG | 0.356959 | 8.2:+73770222 | None:intergenic |
| TGTCAAGGTTACTGGTACTT+TGG | 0.366582 | 8.2:-73768927 | MS.gene074443:CDS |
| CCAGTAACCTTGACAGGTTC+AGG | 0.366641 | 8.2:+73768935 | None:intergenic |
| AAAACCATCTGAAGGACTAT+TGG | 0.370662 | 8.2:-73767465 | MS.gene074443:CDS |
| TCCATCAGAGTATACTTTCA+TGG | 0.371580 | 8.2:-73767951 | MS.gene074443:CDS |
| GTCCTCCAAGAAATAACTTT+GGG | 0.375977 | 8.2:+73767552 | None:intergenic |
| GGAAGTCCATTGATCATATC+AGG | 0.379044 | 8.2:-73768977 | MS.gene074443:CDS |
| ATAGTATCCGTCTTTAGCTT+TGG | 0.384689 | 8.2:+73771580 | None:intergenic |
| CACACTTAGCTTCAAGGGAT+TGG | 0.388864 | 8.2:-73767585 | MS.gene074443:CDS |
| TGCTATTCCTATCGGAGAAC+AGG | 0.398160 | 8.2:-73774770 | MS.gene074443:intron |
| TTCTTCAAAGAGCTCTCTCC+AGG | 0.402768 | 8.2:-73760811 | MS.gene074443:CDS |
| AATCACTTGATTTCCGTAGT+AGG | 0.403765 | 8.2:+73769978 | None:intergenic |
| CAGCTTCTACTTGTTGTGGT+AGG | 0.406572 | 8.2:-73767436 | MS.gene074443:CDS |
| TTTAGAAGGGCTTGATTCGC+AGG | 0.406929 | 8.2:-73769188 | MS.gene074443:CDS |
| TTTAACATTATAGCTTTCAA+TGG | 0.410831 | 8.2:-73770360 | MS.gene074443:CDS |
| AGAGACCAATTCAGTATGAT+AGG | 0.412096 | 8.2:+73771634 | None:intergenic |
| TCAGGATTGTCTACTATGTC+TGG | 0.414612 | 8.2:+73774970 | None:intergenic |
| TTAACATTATAGCTTTCAAT+GGG | 0.414780 | 8.2:-73770359 | MS.gene074443:CDS |
| AGCAACTAGCCATCCTCTTA+AGG | 0.421032 | 8.2:-73771233 | MS.gene074443:intron |
| AAGATCCTATCATACTGAAT+TGG | 0.421569 | 8.2:-73771639 | MS.gene074443:CDS |
| TATGGATGTTGAGTGTTGTT+TGG | 0.422314 | 8.2:-73774869 | MS.gene074443:CDS |
| CATCAAAATCACGCAGGAAA+GGG | 0.429977 | 8.2:+73770828 | None:intergenic |
| GTTGGATTCATCAGAATACT+TGG | 0.436732 | 8.2:-73762876 | MS.gene074443:CDS |
| TAATGTTAAATCTATCTTGT+GGG | 0.437567 | 8.2:+73770373 | None:intergenic |
| GTCATCTCCAGTGCTGGAGC+TGG | 0.439724 | 8.2:+73775051 | None:intergenic |
| GCTGATTGGCGCGCTTTGAT+GGG | 0.447393 | 8.2:-73761045 | MS.gene074443:CDS |
| TTACTGGTACTTTGGCAGAT+AGG | 0.448795 | 8.2:-73768919 | MS.gene074443:CDS |
| CATATTCCTGACCTATCATC+TGG | 0.453930 | 8.2:-73768998 | MS.gene074443:CDS |
| GGAGGACTGAGTCATGGATT+TGG | 0.456309 | 8.2:-73767536 | MS.gene074443:CDS |
| ACCTAGTCACTGCTCGTGCC+TGG | 0.457687 | 8.2:-73768295 | MS.gene074443:CDS |
| AGCTTCTACTTGTTGTGGTA+GGG | 0.458348 | 8.2:-73767435 | MS.gene074443:CDS |
| AGTCCTCCAAGAAATAACTT+TGG | 0.461508 | 8.2:+73767551 | None:intergenic |
| GGCTGATAGCTACGAATGTC+AGG | 0.463581 | 8.2:+73774952 | None:intergenic |
| TTTCTATCTTGGAAATCTCC+AGG | 0.463744 | 8.2:+73770776 | None:intergenic |
| ATACTGACCTAAATCATAAA+CGG | 0.464375 | 8.2:+73769597 | None:intergenic |
| CTATTTATTCTCGCCAAAGA+TGG | 0.467675 | 8.2:-73770331 | MS.gene074443:CDS |
| TGAAGCATTTCTGTTACAAA+AGG | 0.468309 | 8.2:-73767888 | MS.gene074443:intron |
| GCAGTGCACGCGCCACCGTC+CGG | 0.469340 | 8.2:+73774825 | None:intergenic |
| ATACGGCACACTTAGCTTCA+AGG | 0.469413 | 8.2:-73767591 | MS.gene074443:CDS |
| CCAACAGGGTTGACATATGA+AGG | 0.471397 | 8.2:+73771328 | None:intergenic |
| TTTAAGGTCCATTACGAAGC+TGG | 0.474675 | 8.2:+73768895 | None:intergenic |
| TACTGAATTGGTCTCTCTAA+AGG | 0.474967 | 8.2:-73771627 | MS.gene074443:CDS |
| AAGTCAAGAGCTGGAGGAGA+AGG | 0.477873 | 8.2:-73768264 | MS.gene074443:intron |
| CATATGAAGGAAAGCAGAAA+GGG | 0.479606 | 8.2:+73771341 | None:intergenic |
| ATCCCAAAGTTATTTCTTGG+AGG | 0.479788 | 8.2:-73767554 | MS.gene074443:CDS |
| GTACGGACGGTGTGATCCTC+CGG | 0.480955 | 8.2:-73774923 | MS.gene074443:CDS |
| TGCAAATGCTAGCACAAGTT+GGG | 0.484188 | 8.2:-73769636 | MS.gene074443:CDS |
| TATCTACCTGATATGATCAA+TGG | 0.485820 | 8.2:+73768971 | None:intergenic |
| ATCAGCTCCAGCTCCAGCAC+TGG | 0.488897 | 8.2:-73775058 | MS.gene074443:CDS |
| ATCACTTGATTTCCGTAGTA+GGG | 0.489549 | 8.2:+73769979 | None:intergenic |
| AGGATAATGCTATTGCTGAT+TGG | 0.490676 | 8.2:-73761059 | MS.gene074443:CDS |
| TGTTGAGTGTTGTTTGGATA+CGG | 0.494044 | 8.2:-73774863 | MS.gene074443:CDS |
| CTGCAAATGCTAGCACAAGT+TGG | 0.495096 | 8.2:-73769637 | MS.gene074443:CDS |
| TTAGCCTTGCTTGCATCCGT+AGG | 0.497061 | 8.2:+73761021 | None:intergenic |
| TTGTCTACTATGTCTGGATC+AGG | 0.502075 | 8.2:+73774976 | None:intergenic |
| GACCTCGTCATCTCCAGTGC+TGG | 0.505015 | 8.2:+73775045 | None:intergenic |
| CTGCATGTTCGTACTTCCAT+CGG | 0.505960 | 8.2:+73761705 | None:intergenic |
| GATAGGTCAGGAATATGAGT+TGG | 0.508136 | 8.2:+73769004 | None:intergenic |
| CCTTCATATGTCAACCCTGT+TGG | 0.511443 | 8.2:-73771328 | MS.gene074443:CDS |
| GCTATTCAGTACTGCTTCAT+CGG | 0.511835 | 8.2:-73769239 | MS.gene074443:CDS |
| ATTCTGATGAATCCAACAAA+AGG | 0.513129 | 8.2:+73762882 | None:intergenic |
| TTCCCCAATAGTCCTTCAGA+TGG | 0.513937 | 8.2:+73767461 | None:intergenic |
| TATGCCAAAAGTACAAATGC+GGG | 0.514199 | 8.2:+73769850 | None:intergenic |
| AACATTAGCGATCATAAAGC+CGG | 0.514278 | 8.2:-73761680 | MS.gene074443:CDS |
| GGTCATGTATTTAACAAGGC+TGG | 0.514757 | 8.2:+73761513 | None:intergenic |
| AAAAGTAGTGTCAACCCACT+TGG | 0.517833 | 8.2:+73770275 | None:intergenic |
| AAAGTACCAGTAACCTTGAC+AGG | 0.517936 | 8.2:+73768929 | None:intergenic |
| AGCTATCAGCCGTATGTGTA+CGG | 0.522061 | 8.2:-73774940 | MS.gene074443:CDS |
| TGGCGCGTGCACTGCGTGAG+GGG | 0.522266 | 8.2:-73774817 | MS.gene074443:CDS |
| CAGGGAGTAATGCGCCAAGC+TGG | 0.523181 | 8.2:-73771087 | MS.gene074443:CDS |
| GATATAAGTGCAAGCATGAA+GGG | 0.523293 | 8.2:-73770450 | MS.gene074443:CDS |
| TGGAGATTTCCAAGATAGAA+AGG | 0.523673 | 8.2:-73770774 | MS.gene074443:intron |
| AAGGCAGCTTCTACTTGTTG+TGG | 0.524207 | 8.2:-73767440 | MS.gene074443:CDS |
| TCTTCAAGTGACATATTTGG+CGG | 0.525075 | 8.2:-73770866 | MS.gene074443:CDS |
| TTTCTTGGAGGACTGAGTCA+TGG | 0.526665 | 8.2:-73767542 | MS.gene074443:CDS |
| ATAGGTCAGGAATATGAGTT+GGG | 0.530384 | 8.2:+73769005 | None:intergenic |
| TCAATGGACTTCCAGATGAT+AGG | 0.532454 | 8.2:+73768987 | None:intergenic |
| ATCAAAATCACGCAGGAAAG+GGG | 0.535748 | 8.2:+73770829 | None:intergenic |
| ACATATGAAGGAAAGCAGAA+AGG | 0.535767 | 8.2:+73771340 | None:intergenic |
| TAGCCTTGCTTGCATCCGTA+GGG | 0.535822 | 8.2:+73761022 | None:intergenic |
| CCTTAAAGTGAAGAGAGAAA+AGG | 0.535955 | 8.2:-73768879 | MS.gene074443:CDS |
| TCATCAAAATCACGCAGGAA+AGG | 0.536360 | 8.2:+73770827 | None:intergenic |
| TGAAAATGCAAAGAATGCAT+TGG | 0.536617 | 8.2:-73770418 | MS.gene074443:CDS |
| GACGGAGCTGGAGAATTGTC+CGG | 0.541011 | 8.2:+73775125 | None:intergenic |
| GTGAAAAGCTATGTAACGAG+TGG | 0.541602 | 8.2:-73769890 | MS.gene074443:CDS |
| GGACTTCCAGATGATAGGTC+AGG | 0.542631 | 8.2:+73768992 | None:intergenic |
| GTGGCGCGTGCACTGCGTGA+GGG | 0.543101 | 8.2:-73774818 | MS.gene074443:CDS |
| TGTCAAGTTGCTATTCCTAT+CGG | 0.543241 | 8.2:-73774778 | MS.gene074443:CDS |
| TTCTACTTGTTGTGGTAGGG+TGG | 0.543772 | 8.2:-73767432 | MS.gene074443:CDS |
| AAATCATCATCTCCGATGGC+CGG | 0.544530 | 8.2:-73775144 | None:intergenic |
| TGATTCACCTGTTCTCCGAT+AGG | 0.545111 | 8.2:+73774763 | None:intergenic |
| ATAATGTTAAATCTATCTTG+TGG | 0.545247 | 8.2:+73770372 | None:intergenic |
| TACGGCACACTTAGCTTCAA+GGG | 0.545418 | 8.2:-73767590 | MS.gene074443:CDS |
| ATAAAGCCGGATGGATTGCT+TGG | 0.546487 | 8.2:-73761667 | MS.gene074443:CDS |
| GAGACCGAATTCGACGGAGC+TGG | 0.547103 | 8.2:+73775113 | None:intergenic |
| CATTATAGCTTTCAATGGGG+AGG | 0.549379 | 8.2:-73770355 | MS.gene074443:CDS |
| TCCATGAAAGTATACTCTGA+TGG | 0.549476 | 8.2:+73767950 | None:intergenic |
| CAGTGGACCGGTGTTAGTCA+TGG | 0.550023 | 8.2:-73761091 | MS.gene074443:CDS |
| AGTTGCAGTTCTTCTACCGA+TGG | 0.552688 | 8.2:-73761721 | MS.gene074443:CDS |
| AGATATAAGTGCAAGCATGA+AGG | 0.552750 | 8.2:-73770451 | MS.gene074443:CDS |
| GCGCGCTTTGATGGGCCCTA+CGG | 0.555262 | 8.2:-73761037 | MS.gene074443:CDS |
| TTCTATCTTGGAAATCTCCA+GGG | 0.561104 | 8.2:+73770777 | None:intergenic |
| TCTGTCTTTCAGTTTAAGGG+AGG | 0.561701 | 8.2:-73771436 | MS.gene074443:intron |
| AGATAGGACCAGCTTCGTAA+TGG | 0.562019 | 8.2:-73768903 | MS.gene074443:CDS |
| GGGCCCTACGGATGCAAGCA+AGG | 0.567906 | 8.2:-73761025 | MS.gene074443:CDS |
| CTGGAGAATTGTCCGGCCAT+CGG | 0.568446 | 8.2:+73775132 | None:intergenic |
| ACCTCTTCAAAACAGGCATA+CGG | 0.569071 | 8.2:-73767608 | MS.gene074443:intron |
| CTAAGATTACTCACCCTCAC+AGG | 0.569339 | 8.2:-73761002 | MS.gene074443:intron |
| ATACATTGTTAAGATTCCAC+AGG | 0.569514 | 8.2:-73771543 | MS.gene074443:intron |
| AAAGATTGTTCAACTTGATG+AGG | 0.570844 | 8.2:-73761584 | MS.gene074443:CDS |
| ATGAAGCAGTGGTACCAGCT+TGG | 0.574873 | 8.2:-73771047 | MS.gene074443:CDS |
| ATCATATCAGGTAGATACAA+TGG | 0.576109 | 8.2:-73768965 | MS.gene074443:CDS |
| TCTGCTTCATGAAATCGCTA+TGG | 0.576529 | 8.2:-73774887 | MS.gene074443:CDS |
| CATAGGCAATGACCCTACTA+CGG | 0.577577 | 8.2:-73769991 | MS.gene074443:intron |
| TAGAAATTGTTCTTCCAACA+GGG | 0.578623 | 8.2:+73771314 | None:intergenic |
| GTATGGTTTCAGCATTGTCA+AGG | 0.580768 | 8.2:-73761608 | MS.gene074443:CDS |
| CAGAAAATATTATTTCGTGA+TGG | 0.583246 | 8.2:-73771382 | MS.gene074443:CDS |
| TAGTTACCAAGCAATCCATC+CGG | 0.584541 | 8.2:+73761661 | None:intergenic |
| ACGGCGTTTGTAACTGTCAC+CGG | 0.585988 | 8.2:-73774844 | MS.gene074443:CDS |
| GCGTAACACATCGGCGCTGA+CGG | 0.588201 | 8.2:+73775006 | None:intergenic |
| GGTGGCGCGTGCACTGCGTG+AGG | 0.588589 | 8.2:-73774819 | MS.gene074443:CDS |
| CATCATGCTTCCCTTAACTC+AGG | 0.588707 | 8.2:-73770232 | MS.gene074443:intron |
| CATAACTATAATCAGTGGAC+CGG | 0.589528 | 8.2:-73761103 | MS.gene074443:intron |
| AATGCTAGCACAAGTTGGGA+GGG | 0.591115 | 8.2:-73769632 | MS.gene074443:CDS |
| TCACCATCAAAAGTTTAGAA+GGG | 0.591609 | 8.2:-73769201 | MS.gene074443:CDS |
| GAAGGAGAGACAACTGAAAG+TGG | 0.591875 | 8.2:+73763184 | None:intergenic |
| GCCTTGTTAAATACATGACC+AGG | 0.593010 | 8.2:-73761510 | MS.gene074443:intron |
| AGACTTCAGTTTCTCGTACA+CGG | 0.595292 | 8.2:-73771016 | MS.gene074443:intron |
| ACCAGGCACGAGCAGTGACT+AGG | 0.603982 | 8.2:+73768294 | None:intergenic |
| TAGAAGTAAAATCATTGACC+TGG | 0.604841 | 8.2:+73760793 | None:intergenic |
| TCACACCGTCCGTACACATA+CGG | 0.605033 | 8.2:+73774931 | None:intergenic |
| TCCAAAACCATGACTAACAC+CGG | 0.605331 | 8.2:+73761084 | None:intergenic |
| AAGTCTGTACTTGACCAAGC+TGG | 0.608653 | 8.2:+73771033 | None:intergenic |
| GCGATTTCATGAAGCAGAAG+CGG | 0.608981 | 8.2:+73774892 | None:intergenic |
| CTCTTTCATCAAAATCACGC+AGG | 0.609657 | 8.2:+73770822 | None:intergenic |
| AAAGAAGCAAAACCATCTGA+AGG | 0.611520 | 8.2:-73767473 | MS.gene074443:CDS |
| AAATGCTAGCACAAGTTGGG+AGG | 0.611778 | 8.2:-73769633 | MS.gene074443:CDS |
| ATCTGAAGGACTATTGGGGA+AGG | 0.612930 | 8.2:-73767459 | MS.gene074443:CDS |
| AAGTTTATCATATGAAGCAG+TGG | 0.615020 | 8.2:-73771058 | MS.gene074443:CDS |
| TGAAAAGCTATGTAACGAGT+GGG | 0.616349 | 8.2:-73769889 | MS.gene074443:CDS |
| CTCCAGCACTGGAGATGACG+AGG | 0.618219 | 8.2:-73775047 | MS.gene074443:CDS |
| CTGATGAATCCAACAAAAGG+AGG | 0.619847 | 8.2:+73762885 | None:intergenic |
| ACATTCACATCTCACGTGCA+AGG | 0.622899 | 8.2:-73763161 | MS.gene074443:intron |
| AACACATCGGCGCTGACGGT+AGG | 0.632700 | 8.2:+73775010 | None:intergenic |
| GAGGTTGAGACCGAATTCGA+CGG | 0.633131 | 8.2:+73775107 | None:intergenic |
| AGCAGAAGCGGTATCAACGC+CGG | 0.634129 | 8.2:+73774904 | None:intergenic |
| CTATGCCAAAAGTACAAATG+CGG | 0.636565 | 8.2:+73769849 | None:intergenic |
| AGAAGGGCTTGATTCGCAGG+AGG | 0.636977 | 8.2:-73769185 | MS.gene074443:intron |
| ATGCTAGCACAAGTTGGGAG+GGG | 0.638225 | 8.2:-73769631 | MS.gene074443:CDS |
| ACCTGGTCATGTATTTAACA+AGG | 0.639489 | 8.2:+73761509 | None:intergenic |
| TTGTAACTGTCACCGGACGG+TGG | 0.641261 | 8.2:-73774837 | MS.gene074443:CDS |
| AAAATGGCCAAAGCTAAAGA+CGG | 0.642149 | 8.2:-73771587 | MS.gene074443:CDS |
| CGTTTGTAACTGTCACCGGA+CGG | 0.646698 | 8.2:-73774840 | MS.gene074443:CDS |
| TTAGCGATCATAAAGCCGGA+TGG | 0.648445 | 8.2:-73761676 | MS.gene074443:CDS |
| GGGTTCACTTCTAGGTGTCG+AGG | 0.651015 | 8.2:-73771675 | MS.gene074443:CDS |
| GGTATCACCGCGTAACACAT+CGG | 0.659208 | 8.2:+73774997 | None:intergenic |
| ATCAGCCGTATGTGTACGGA+CGG | 0.668377 | 8.2:-73774936 | MS.gene074443:CDS |
| CAATTGACATTCGAATGCAA+AGG | 0.670629 | 8.2:-73769261 | MS.gene074443:CDS |
| AAAGATGGAACCATCTACAG+TGG | 0.671111 | 8.2:-73770316 | MS.gene074443:CDS |
| AACCATCTGAAGGACTATTG+GGG | 0.680096 | 8.2:-73767463 | MS.gene074443:CDS |
| GTCAGCGCCGATGTGTTACG+CGG | 0.686535 | 8.2:-73775004 | MS.gene074443:CDS |
| AGGGTGGCTGACACATGTTG+TGG | 0.691615 | 8.2:-73767416 | MS.gene074443:CDS |
| TAACATTATAGCTTTCAATG+GGG | 0.693997 | 8.2:-73770358 | MS.gene074443:CDS |
| ATGCCAAAAGTACAAATGCG+GGG | 0.694586 | 8.2:+73769851 | None:intergenic |
| AGAAGCGGTATCAACGCCGG+AGG | 0.699312 | 8.2:+73774907 | None:intergenic |
| GTAACATGCATGACCTGTGA+GGG | 0.731782 | 8.2:+73760989 | None:intergenic |
| CACGTGAGATGTGAATGTGA+AGG | 0.738896 | 8.2:+73763166 | None:intergenic |
| AGTAACATGCATGACCTGTG+AGG | 0.780446 | 8.2:+73760988 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 73760804 | 73775151 | 73760804 | ID=MS.gene074443 |
| chr8.2 | mRNA | 73760804 | 73775151 | 73760804 | ID=MS.gene074443.t1;Parent=MS.gene074443 |
| chr8.2 | exon | 73774771 | 73775151 | 73774771 | ID=MS.gene074443.t1.exon1;Parent=MS.gene074443.t1 |
| chr8.2 | CDS | 73774771 | 73775151 | 73774771 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
| chr8.2 | exon | 73771544 | 73771696 | 73771544 | ID=MS.gene074443.t1.exon2;Parent=MS.gene074443.t1 |
| chr8.2 | CDS | 73771544 | 73771696 | 73771544 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
| chr8.2 | exon | 73771234 | 73771446 | 73771234 | ID=MS.gene074443.t1.exon3;Parent=MS.gene074443.t1 |
| chr8.2 | CDS | 73771234 | 73771446 | 73771234 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
| chr8.2 | exon | 73771017 | 73771106 | 73771017 | ID=MS.gene074443.t1.exon4;Parent=MS.gene074443.t1 |
| chr8.2 | CDS | 73771017 | 73771106 | 73771017 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
| chr8.2 | exon | 73770775 | 73770891 | 73770775 | ID=MS.gene074443.t1.exon5;Parent=MS.gene074443.t1 |
| chr8.2 | CDS | 73770775 | 73770891 | 73770775 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
| chr8.2 | exon | 73770233 | 73770502 | 73770233 | ID=MS.gene074443.t1.exon6;Parent=MS.gene074443.t1 |
| chr8.2 | CDS | 73770233 | 73770502 | 73770233 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
| chr8.2 | exon | 73769849 | 73770008 | 73769849 | ID=MS.gene074443.t1.exon7;Parent=MS.gene074443.t1 |
| chr8.2 | CDS | 73769849 | 73770008 | 73769849 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
| chr8.2 | exon | 73769605 | 73769682 | 73769605 | ID=MS.gene074443.t1.exon8;Parent=MS.gene074443.t1 |
| chr8.2 | CDS | 73769605 | 73769682 | 73769605 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
| chr8.2 | exon | 73769186 | 73769286 | 73769186 | ID=MS.gene074443.t1.exon9;Parent=MS.gene074443.t1 |
| chr8.2 | CDS | 73769186 | 73769286 | 73769186 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
| chr8.2 | exon | 73768862 | 73769032 | 73768862 | ID=MS.gene074443.t1.exon10;Parent=MS.gene074443.t1 |
| chr8.2 | CDS | 73768862 | 73769032 | 73768862 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
| chr8.2 | exon | 73768265 | 73768339 | 73768265 | ID=MS.gene074443.t1.exon11;Parent=MS.gene074443.t1 |
| chr8.2 | CDS | 73768265 | 73768339 | 73768265 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
| chr8.2 | exon | 73767889 | 73768002 | 73767889 | ID=MS.gene074443.t1.exon12;Parent=MS.gene074443.t1 |
| chr8.2 | CDS | 73767889 | 73768002 | 73767889 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
| chr8.2 | exon | 73767388 | 73767615 | 73767388 | ID=MS.gene074443.t1.exon13;Parent=MS.gene074443.t1 |
| chr8.2 | CDS | 73767388 | 73767615 | 73767388 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
| chr8.2 | exon | 73763162 | 73763247 | 73763162 | ID=MS.gene074443.t1.exon14;Parent=MS.gene074443.t1 |
| chr8.2 | CDS | 73763162 | 73763247 | 73763162 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
| chr8.2 | exon | 73762849 | 73762926 | 73762849 | ID=MS.gene074443.t1.exon15;Parent=MS.gene074443.t1 |
| chr8.2 | CDS | 73762849 | 73762926 | 73762849 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
| chr8.2 | exon | 73761511 | 73761741 | 73761511 | ID=MS.gene074443.t1.exon16;Parent=MS.gene074443.t1 |
| chr8.2 | CDS | 73761511 | 73761741 | 73761511 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
| chr8.2 | exon | 73761003 | 73761110 | 73761003 | ID=MS.gene074443.t1.exon17;Parent=MS.gene074443.t1 |
| chr8.2 | CDS | 73761003 | 73761110 | 73761003 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
| chr8.2 | exon | 73760804 | 73760921 | 73760804 | ID=MS.gene074443.t1.exon18;Parent=MS.gene074443.t1 |
| chr8.2 | CDS | 73760804 | 73760921 | 73760804 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
| Gene Sequence |
| Protein sequence |