Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074443.t1 | XP_003627333.2 | 94.1 | 679 | 40 | 0 | 1 | 679 | 1 | 679 | 0.00E+00 | 1278.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074443.t1 | Q6NLG3 | 67.2 | 134 | 44 | 0 | 789 | 922 | 1 | 134 | 7.5e-47 | 190.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074443.t1 | G7L7M3 | 94.1 | 679 | 40 | 0 | 1 | 679 | 1 | 679 | 0.0e+00 | 1278.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051091 | MS.gene074443 | 0.946754 | 2.52E-105 | -1.69E-46 |
MS.gene056525 | MS.gene074443 | 0.814171 | 1.76E-51 | -1.69E-46 |
MS.gene059896 | MS.gene074443 | -0.80539 | 1.37E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074443.t1 | MTR_8g021230 | 94.421 | 717 | 40 | 0 | 1 | 717 | 1 | 717 | 0.0 | 1373 |
MS.gene074443.t1 | MTR_8g021230 | 93.916 | 641 | 39 | 0 | 1 | 641 | 1 | 641 | 0.0 | 1216 |
MS.gene074443.t1 | MTR_8g021230 | 93.471 | 582 | 38 | 0 | 1 | 582 | 1 | 582 | 0.0 | 1099 |
MS.gene074443.t1 | MTR_8g021230 | 94.821 | 560 | 29 | 0 | 158 | 717 | 1 | 560 | 0.0 | 1067 |
MS.gene074443.t1 | MTR_8g021230 | 94.215 | 484 | 28 | 0 | 158 | 641 | 1 | 484 | 0.0 | 910 |
MS.gene074443.t1 | MTR_4g125080 | 49.798 | 741 | 360 | 7 | 1 | 737 | 1 | 733 | 0.0 | 696 |
MS.gene074443.t1 | MTR_2g042570 | 48.091 | 707 | 353 | 7 | 1 | 700 | 1 | 700 | 0.0 | 660 |
MS.gene074443.t1 | MTR_4g125080 | 53.528 | 581 | 267 | 2 | 1 | 579 | 1 | 580 | 0.0 | 630 |
MS.gene074443.t1 | MTR_4g125080 | 47.359 | 587 | 299 | 6 | 153 | 737 | 5 | 583 | 1.16e-172 | 515 |
MS.gene074443.t1 | MTR_8g021233 | 94.245 | 139 | 8 | 0 | 747 | 885 | 35 | 173 | 2.24e-85 | 273 |
MS.gene074443.t1 | MTR_8g007235 | 34.074 | 135 | 86 | 1 | 784 | 918 | 3 | 134 | 4.57e-22 | 94.0 |
MS.gene074443.t1 | MTR_4g104030 | 32.847 | 137 | 89 | 1 | 782 | 918 | 81 | 214 | 2.31e-20 | 91.7 |
MS.gene074443.t1 | MTR_8g099450 | 31.159 | 138 | 92 | 1 | 780 | 917 | 81 | 215 | 2.94e-17 | 82.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074443.t1 | AT1G19110 | 50.142 | 706 | 340 | 5 | 1 | 699 | 1 | 701 | 0.0 | 699 |
MS.gene074443.t1 | AT1G72500 | 48.505 | 736 | 362 | 6 | 1 | 721 | 1 | 734 | 0.0 | 687 |
MS.gene074443.t1 | AT1G72500 | 51.974 | 608 | 289 | 2 | 1 | 605 | 1 | 608 | 0.0 | 637 |
MS.gene074443.t1 | AT1G72500 | 52.144 | 583 | 276 | 2 | 1 | 580 | 1 | 583 | 0.0 | 610 |
MS.gene074443.t1 | AT1G17410 | 65.278 | 144 | 50 | 0 | 779 | 922 | 28 | 171 | 1.44e-60 | 204 |
MS.gene074443.t1 | AT1G17410 | 67.164 | 134 | 44 | 0 | 789 | 922 | 1 | 134 | 1.13e-57 | 194 |
MS.gene074443.t1 | AT1G17410 | 67.708 | 96 | 31 | 0 | 789 | 884 | 1 | 96 | 6.30e-40 | 144 |
MS.gene074443.t1 | AT5G63310 | 36.496 | 137 | 84 | 1 | 782 | 918 | 82 | 215 | 5.28e-23 | 99.4 |
MS.gene074443.t1 | AT4G09320 | 33.582 | 134 | 86 | 1 | 783 | 916 | 1 | 131 | 3.98e-22 | 94.0 |
MS.gene074443.t1 | AT4G11010 | 31.646 | 158 | 104 | 2 | 761 | 917 | 65 | 219 | 3.60e-19 | 88.2 |
MS.gene074443.t1 | AT4G23900 | 30.488 | 164 | 110 | 2 | 755 | 917 | 58 | 218 | 1.66e-18 | 86.3 |
MS.gene074443.t1 | AT4G23895 | 30.488 | 164 | 110 | 2 | 755 | 917 | 288 | 448 | 2.00e-17 | 86.7 |
Find 194 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGATGCCGTTTATGATTT+AGG | 0.173545 | 8.2:-73769604 | MS.gene074443:intron |
GAATCTTAACAATGTATATT+TGG | 0.174409 | 8.2:+73771549 | None:intergenic |
CCTGAACCTGTCAAGGTTAC+TGG | 0.196671 | 8.2:-73768935 | MS.gene074443:CDS |
TATCTCTCTTTGTGCAGATT+TGG | 0.258721 | 8.2:+73760840 | None:intergenic |
ACTGTAGATGGTTCCATCTT+TGG | 0.265622 | 8.2:+73770318 | None:intergenic |
TGCTGATTGGCGCGCTTTGA+TGG | 0.267455 | 8.2:-73761046 | MS.gene074443:CDS |
ATCTCTCTTTGTGCAGATTT+GGG | 0.271587 | 8.2:+73760841 | None:intergenic |
ACACCCCGCATTTGTACTTT+TGG | 0.274066 | 8.2:-73769854 | MS.gene074443:CDS |
TCTGATCTTAACTGAGAAAA+TGG | 0.279654 | 8.2:+73771411 | None:intergenic |
CATTCTGTCTTTCAGTTTAA+GGG | 0.282341 | 8.2:-73771439 | MS.gene074443:intron |
TCCATGTTCTTGTAGACTTT+CGG | 0.283183 | 8.2:-73763240 | MS.gene074443:intron |
AACAGCATCAGAGCAAAATA+TGG | 0.291545 | 8.2:-73760904 | MS.gene074443:intron |
TGAAACATACCTTTCTATCT+TGG | 0.291596 | 8.2:+73770765 | None:intergenic |
GGCTAACAGGGTTCACTTCT+AGG | 0.291976 | 8.2:-73771683 | MS.gene074443:intron |
GTTTCTTCAAGTGACATATT+TGG | 0.298969 | 8.2:-73770869 | MS.gene074443:CDS |
GAAATCCCAAAGTTATTTCT+TGG | 0.301433 | 8.2:-73767557 | MS.gene074443:CDS |
AAAATTGCTTCCACTGTAGA+TGG | 0.320409 | 8.2:+73770306 | None:intergenic |
ACCGGTGTTAGTCATGGTTT+TGG | 0.320603 | 8.2:-73761085 | MS.gene074443:CDS |
TTAGAAATTGTTCTTCCAAC+AGG | 0.322142 | 8.2:+73771313 | None:intergenic |
TTCTCCAGCTCCGTCGAATT+CGG | 0.322473 | 8.2:-73775117 | MS.gene074443:CDS |
ATCACCATCAAAAGTTTAGA+AGG | 0.323197 | 8.2:-73769202 | MS.gene074443:CDS |
CATCTTTGGCGAGAATAAAT+AGG | 0.325085 | 8.2:+73770332 | None:intergenic |
CAACTTGTGCTAGCATTTGC+AGG | 0.336684 | 8.2:+73769638 | None:intergenic |
GGTGTCGAGGTCAATGATTT+TGG | 0.341729 | 8.2:-73771662 | MS.gene074443:CDS |
AATTAGAATTACCTGAGTTA+AGG | 0.346965 | 8.2:+73770221 | None:intergenic |
AAACCATCTGAAGGACTATT+GGG | 0.347518 | 8.2:-73767464 | MS.gene074443:CDS |
ATTAGAATTACCTGAGTTAA+GGG | 0.356959 | 8.2:+73770222 | None:intergenic |
TGTCAAGGTTACTGGTACTT+TGG | 0.366582 | 8.2:-73768927 | MS.gene074443:CDS |
CCAGTAACCTTGACAGGTTC+AGG | 0.366641 | 8.2:+73768935 | None:intergenic |
AAAACCATCTGAAGGACTAT+TGG | 0.370662 | 8.2:-73767465 | MS.gene074443:CDS |
TCCATCAGAGTATACTTTCA+TGG | 0.371580 | 8.2:-73767951 | MS.gene074443:CDS |
GTCCTCCAAGAAATAACTTT+GGG | 0.375977 | 8.2:+73767552 | None:intergenic |
GGAAGTCCATTGATCATATC+AGG | 0.379044 | 8.2:-73768977 | MS.gene074443:CDS |
ATAGTATCCGTCTTTAGCTT+TGG | 0.384689 | 8.2:+73771580 | None:intergenic |
CACACTTAGCTTCAAGGGAT+TGG | 0.388864 | 8.2:-73767585 | MS.gene074443:CDS |
TGCTATTCCTATCGGAGAAC+AGG | 0.398160 | 8.2:-73774770 | MS.gene074443:intron |
TTCTTCAAAGAGCTCTCTCC+AGG | 0.402768 | 8.2:-73760811 | MS.gene074443:CDS |
AATCACTTGATTTCCGTAGT+AGG | 0.403765 | 8.2:+73769978 | None:intergenic |
CAGCTTCTACTTGTTGTGGT+AGG | 0.406572 | 8.2:-73767436 | MS.gene074443:CDS |
TTTAGAAGGGCTTGATTCGC+AGG | 0.406929 | 8.2:-73769188 | MS.gene074443:CDS |
TTTAACATTATAGCTTTCAA+TGG | 0.410831 | 8.2:-73770360 | MS.gene074443:CDS |
AGAGACCAATTCAGTATGAT+AGG | 0.412096 | 8.2:+73771634 | None:intergenic |
TCAGGATTGTCTACTATGTC+TGG | 0.414612 | 8.2:+73774970 | None:intergenic |
TTAACATTATAGCTTTCAAT+GGG | 0.414780 | 8.2:-73770359 | MS.gene074443:CDS |
AGCAACTAGCCATCCTCTTA+AGG | 0.421032 | 8.2:-73771233 | MS.gene074443:intron |
AAGATCCTATCATACTGAAT+TGG | 0.421569 | 8.2:-73771639 | MS.gene074443:CDS |
TATGGATGTTGAGTGTTGTT+TGG | 0.422314 | 8.2:-73774869 | MS.gene074443:CDS |
CATCAAAATCACGCAGGAAA+GGG | 0.429977 | 8.2:+73770828 | None:intergenic |
GTTGGATTCATCAGAATACT+TGG | 0.436732 | 8.2:-73762876 | MS.gene074443:CDS |
TAATGTTAAATCTATCTTGT+GGG | 0.437567 | 8.2:+73770373 | None:intergenic |
GTCATCTCCAGTGCTGGAGC+TGG | 0.439724 | 8.2:+73775051 | None:intergenic |
GCTGATTGGCGCGCTTTGAT+GGG | 0.447393 | 8.2:-73761045 | MS.gene074443:CDS |
TTACTGGTACTTTGGCAGAT+AGG | 0.448795 | 8.2:-73768919 | MS.gene074443:CDS |
CATATTCCTGACCTATCATC+TGG | 0.453930 | 8.2:-73768998 | MS.gene074443:CDS |
GGAGGACTGAGTCATGGATT+TGG | 0.456309 | 8.2:-73767536 | MS.gene074443:CDS |
ACCTAGTCACTGCTCGTGCC+TGG | 0.457687 | 8.2:-73768295 | MS.gene074443:CDS |
AGCTTCTACTTGTTGTGGTA+GGG | 0.458348 | 8.2:-73767435 | MS.gene074443:CDS |
AGTCCTCCAAGAAATAACTT+TGG | 0.461508 | 8.2:+73767551 | None:intergenic |
GGCTGATAGCTACGAATGTC+AGG | 0.463581 | 8.2:+73774952 | None:intergenic |
TTTCTATCTTGGAAATCTCC+AGG | 0.463744 | 8.2:+73770776 | None:intergenic |
ATACTGACCTAAATCATAAA+CGG | 0.464375 | 8.2:+73769597 | None:intergenic |
CTATTTATTCTCGCCAAAGA+TGG | 0.467675 | 8.2:-73770331 | MS.gene074443:CDS |
TGAAGCATTTCTGTTACAAA+AGG | 0.468309 | 8.2:-73767888 | MS.gene074443:intron |
GCAGTGCACGCGCCACCGTC+CGG | 0.469340 | 8.2:+73774825 | None:intergenic |
ATACGGCACACTTAGCTTCA+AGG | 0.469413 | 8.2:-73767591 | MS.gene074443:CDS |
CCAACAGGGTTGACATATGA+AGG | 0.471397 | 8.2:+73771328 | None:intergenic |
TTTAAGGTCCATTACGAAGC+TGG | 0.474675 | 8.2:+73768895 | None:intergenic |
TACTGAATTGGTCTCTCTAA+AGG | 0.474967 | 8.2:-73771627 | MS.gene074443:CDS |
AAGTCAAGAGCTGGAGGAGA+AGG | 0.477873 | 8.2:-73768264 | MS.gene074443:intron |
CATATGAAGGAAAGCAGAAA+GGG | 0.479606 | 8.2:+73771341 | None:intergenic |
ATCCCAAAGTTATTTCTTGG+AGG | 0.479788 | 8.2:-73767554 | MS.gene074443:CDS |
GTACGGACGGTGTGATCCTC+CGG | 0.480955 | 8.2:-73774923 | MS.gene074443:CDS |
TGCAAATGCTAGCACAAGTT+GGG | 0.484188 | 8.2:-73769636 | MS.gene074443:CDS |
TATCTACCTGATATGATCAA+TGG | 0.485820 | 8.2:+73768971 | None:intergenic |
ATCAGCTCCAGCTCCAGCAC+TGG | 0.488897 | 8.2:-73775058 | MS.gene074443:CDS |
ATCACTTGATTTCCGTAGTA+GGG | 0.489549 | 8.2:+73769979 | None:intergenic |
AGGATAATGCTATTGCTGAT+TGG | 0.490676 | 8.2:-73761059 | MS.gene074443:CDS |
TGTTGAGTGTTGTTTGGATA+CGG | 0.494044 | 8.2:-73774863 | MS.gene074443:CDS |
CTGCAAATGCTAGCACAAGT+TGG | 0.495096 | 8.2:-73769637 | MS.gene074443:CDS |
TTAGCCTTGCTTGCATCCGT+AGG | 0.497061 | 8.2:+73761021 | None:intergenic |
TTGTCTACTATGTCTGGATC+AGG | 0.502075 | 8.2:+73774976 | None:intergenic |
GACCTCGTCATCTCCAGTGC+TGG | 0.505015 | 8.2:+73775045 | None:intergenic |
CTGCATGTTCGTACTTCCAT+CGG | 0.505960 | 8.2:+73761705 | None:intergenic |
GATAGGTCAGGAATATGAGT+TGG | 0.508136 | 8.2:+73769004 | None:intergenic |
CCTTCATATGTCAACCCTGT+TGG | 0.511443 | 8.2:-73771328 | MS.gene074443:CDS |
GCTATTCAGTACTGCTTCAT+CGG | 0.511835 | 8.2:-73769239 | MS.gene074443:CDS |
ATTCTGATGAATCCAACAAA+AGG | 0.513129 | 8.2:+73762882 | None:intergenic |
TTCCCCAATAGTCCTTCAGA+TGG | 0.513937 | 8.2:+73767461 | None:intergenic |
TATGCCAAAAGTACAAATGC+GGG | 0.514199 | 8.2:+73769850 | None:intergenic |
AACATTAGCGATCATAAAGC+CGG | 0.514278 | 8.2:-73761680 | MS.gene074443:CDS |
GGTCATGTATTTAACAAGGC+TGG | 0.514757 | 8.2:+73761513 | None:intergenic |
AAAAGTAGTGTCAACCCACT+TGG | 0.517833 | 8.2:+73770275 | None:intergenic |
AAAGTACCAGTAACCTTGAC+AGG | 0.517936 | 8.2:+73768929 | None:intergenic |
AGCTATCAGCCGTATGTGTA+CGG | 0.522061 | 8.2:-73774940 | MS.gene074443:CDS |
TGGCGCGTGCACTGCGTGAG+GGG | 0.522266 | 8.2:-73774817 | MS.gene074443:CDS |
CAGGGAGTAATGCGCCAAGC+TGG | 0.523181 | 8.2:-73771087 | MS.gene074443:CDS |
GATATAAGTGCAAGCATGAA+GGG | 0.523293 | 8.2:-73770450 | MS.gene074443:CDS |
TGGAGATTTCCAAGATAGAA+AGG | 0.523673 | 8.2:-73770774 | MS.gene074443:intron |
AAGGCAGCTTCTACTTGTTG+TGG | 0.524207 | 8.2:-73767440 | MS.gene074443:CDS |
TCTTCAAGTGACATATTTGG+CGG | 0.525075 | 8.2:-73770866 | MS.gene074443:CDS |
TTTCTTGGAGGACTGAGTCA+TGG | 0.526665 | 8.2:-73767542 | MS.gene074443:CDS |
ATAGGTCAGGAATATGAGTT+GGG | 0.530384 | 8.2:+73769005 | None:intergenic |
TCAATGGACTTCCAGATGAT+AGG | 0.532454 | 8.2:+73768987 | None:intergenic |
ATCAAAATCACGCAGGAAAG+GGG | 0.535748 | 8.2:+73770829 | None:intergenic |
ACATATGAAGGAAAGCAGAA+AGG | 0.535767 | 8.2:+73771340 | None:intergenic |
TAGCCTTGCTTGCATCCGTA+GGG | 0.535822 | 8.2:+73761022 | None:intergenic |
CCTTAAAGTGAAGAGAGAAA+AGG | 0.535955 | 8.2:-73768879 | MS.gene074443:CDS |
TCATCAAAATCACGCAGGAA+AGG | 0.536360 | 8.2:+73770827 | None:intergenic |
TGAAAATGCAAAGAATGCAT+TGG | 0.536617 | 8.2:-73770418 | MS.gene074443:CDS |
GACGGAGCTGGAGAATTGTC+CGG | 0.541011 | 8.2:+73775125 | None:intergenic |
GTGAAAAGCTATGTAACGAG+TGG | 0.541602 | 8.2:-73769890 | MS.gene074443:CDS |
GGACTTCCAGATGATAGGTC+AGG | 0.542631 | 8.2:+73768992 | None:intergenic |
GTGGCGCGTGCACTGCGTGA+GGG | 0.543101 | 8.2:-73774818 | MS.gene074443:CDS |
TGTCAAGTTGCTATTCCTAT+CGG | 0.543241 | 8.2:-73774778 | MS.gene074443:CDS |
TTCTACTTGTTGTGGTAGGG+TGG | 0.543772 | 8.2:-73767432 | MS.gene074443:CDS |
AAATCATCATCTCCGATGGC+CGG | 0.544530 | 8.2:-73775144 | None:intergenic |
TGATTCACCTGTTCTCCGAT+AGG | 0.545111 | 8.2:+73774763 | None:intergenic |
ATAATGTTAAATCTATCTTG+TGG | 0.545247 | 8.2:+73770372 | None:intergenic |
TACGGCACACTTAGCTTCAA+GGG | 0.545418 | 8.2:-73767590 | MS.gene074443:CDS |
ATAAAGCCGGATGGATTGCT+TGG | 0.546487 | 8.2:-73761667 | MS.gene074443:CDS |
GAGACCGAATTCGACGGAGC+TGG | 0.547103 | 8.2:+73775113 | None:intergenic |
CATTATAGCTTTCAATGGGG+AGG | 0.549379 | 8.2:-73770355 | MS.gene074443:CDS |
TCCATGAAAGTATACTCTGA+TGG | 0.549476 | 8.2:+73767950 | None:intergenic |
CAGTGGACCGGTGTTAGTCA+TGG | 0.550023 | 8.2:-73761091 | MS.gene074443:CDS |
AGTTGCAGTTCTTCTACCGA+TGG | 0.552688 | 8.2:-73761721 | MS.gene074443:CDS |
AGATATAAGTGCAAGCATGA+AGG | 0.552750 | 8.2:-73770451 | MS.gene074443:CDS |
GCGCGCTTTGATGGGCCCTA+CGG | 0.555262 | 8.2:-73761037 | MS.gene074443:CDS |
TTCTATCTTGGAAATCTCCA+GGG | 0.561104 | 8.2:+73770777 | None:intergenic |
TCTGTCTTTCAGTTTAAGGG+AGG | 0.561701 | 8.2:-73771436 | MS.gene074443:intron |
AGATAGGACCAGCTTCGTAA+TGG | 0.562019 | 8.2:-73768903 | MS.gene074443:CDS |
GGGCCCTACGGATGCAAGCA+AGG | 0.567906 | 8.2:-73761025 | MS.gene074443:CDS |
CTGGAGAATTGTCCGGCCAT+CGG | 0.568446 | 8.2:+73775132 | None:intergenic |
ACCTCTTCAAAACAGGCATA+CGG | 0.569071 | 8.2:-73767608 | MS.gene074443:intron |
CTAAGATTACTCACCCTCAC+AGG | 0.569339 | 8.2:-73761002 | MS.gene074443:intron |
ATACATTGTTAAGATTCCAC+AGG | 0.569514 | 8.2:-73771543 | MS.gene074443:intron |
AAAGATTGTTCAACTTGATG+AGG | 0.570844 | 8.2:-73761584 | MS.gene074443:CDS |
ATGAAGCAGTGGTACCAGCT+TGG | 0.574873 | 8.2:-73771047 | MS.gene074443:CDS |
ATCATATCAGGTAGATACAA+TGG | 0.576109 | 8.2:-73768965 | MS.gene074443:CDS |
TCTGCTTCATGAAATCGCTA+TGG | 0.576529 | 8.2:-73774887 | MS.gene074443:CDS |
CATAGGCAATGACCCTACTA+CGG | 0.577577 | 8.2:-73769991 | MS.gene074443:intron |
TAGAAATTGTTCTTCCAACA+GGG | 0.578623 | 8.2:+73771314 | None:intergenic |
GTATGGTTTCAGCATTGTCA+AGG | 0.580768 | 8.2:-73761608 | MS.gene074443:CDS |
CAGAAAATATTATTTCGTGA+TGG | 0.583246 | 8.2:-73771382 | MS.gene074443:CDS |
TAGTTACCAAGCAATCCATC+CGG | 0.584541 | 8.2:+73761661 | None:intergenic |
ACGGCGTTTGTAACTGTCAC+CGG | 0.585988 | 8.2:-73774844 | MS.gene074443:CDS |
GCGTAACACATCGGCGCTGA+CGG | 0.588201 | 8.2:+73775006 | None:intergenic |
GGTGGCGCGTGCACTGCGTG+AGG | 0.588589 | 8.2:-73774819 | MS.gene074443:CDS |
CATCATGCTTCCCTTAACTC+AGG | 0.588707 | 8.2:-73770232 | MS.gene074443:intron |
CATAACTATAATCAGTGGAC+CGG | 0.589528 | 8.2:-73761103 | MS.gene074443:intron |
AATGCTAGCACAAGTTGGGA+GGG | 0.591115 | 8.2:-73769632 | MS.gene074443:CDS |
TCACCATCAAAAGTTTAGAA+GGG | 0.591609 | 8.2:-73769201 | MS.gene074443:CDS |
GAAGGAGAGACAACTGAAAG+TGG | 0.591875 | 8.2:+73763184 | None:intergenic |
GCCTTGTTAAATACATGACC+AGG | 0.593010 | 8.2:-73761510 | MS.gene074443:intron |
AGACTTCAGTTTCTCGTACA+CGG | 0.595292 | 8.2:-73771016 | MS.gene074443:intron |
ACCAGGCACGAGCAGTGACT+AGG | 0.603982 | 8.2:+73768294 | None:intergenic |
TAGAAGTAAAATCATTGACC+TGG | 0.604841 | 8.2:+73760793 | None:intergenic |
TCACACCGTCCGTACACATA+CGG | 0.605033 | 8.2:+73774931 | None:intergenic |
TCCAAAACCATGACTAACAC+CGG | 0.605331 | 8.2:+73761084 | None:intergenic |
AAGTCTGTACTTGACCAAGC+TGG | 0.608653 | 8.2:+73771033 | None:intergenic |
GCGATTTCATGAAGCAGAAG+CGG | 0.608981 | 8.2:+73774892 | None:intergenic |
CTCTTTCATCAAAATCACGC+AGG | 0.609657 | 8.2:+73770822 | None:intergenic |
AAAGAAGCAAAACCATCTGA+AGG | 0.611520 | 8.2:-73767473 | MS.gene074443:CDS |
AAATGCTAGCACAAGTTGGG+AGG | 0.611778 | 8.2:-73769633 | MS.gene074443:CDS |
ATCTGAAGGACTATTGGGGA+AGG | 0.612930 | 8.2:-73767459 | MS.gene074443:CDS |
AAGTTTATCATATGAAGCAG+TGG | 0.615020 | 8.2:-73771058 | MS.gene074443:CDS |
TGAAAAGCTATGTAACGAGT+GGG | 0.616349 | 8.2:-73769889 | MS.gene074443:CDS |
CTCCAGCACTGGAGATGACG+AGG | 0.618219 | 8.2:-73775047 | MS.gene074443:CDS |
CTGATGAATCCAACAAAAGG+AGG | 0.619847 | 8.2:+73762885 | None:intergenic |
ACATTCACATCTCACGTGCA+AGG | 0.622899 | 8.2:-73763161 | MS.gene074443:intron |
AACACATCGGCGCTGACGGT+AGG | 0.632700 | 8.2:+73775010 | None:intergenic |
GAGGTTGAGACCGAATTCGA+CGG | 0.633131 | 8.2:+73775107 | None:intergenic |
AGCAGAAGCGGTATCAACGC+CGG | 0.634129 | 8.2:+73774904 | None:intergenic |
CTATGCCAAAAGTACAAATG+CGG | 0.636565 | 8.2:+73769849 | None:intergenic |
AGAAGGGCTTGATTCGCAGG+AGG | 0.636977 | 8.2:-73769185 | MS.gene074443:intron |
ATGCTAGCACAAGTTGGGAG+GGG | 0.638225 | 8.2:-73769631 | MS.gene074443:CDS |
ACCTGGTCATGTATTTAACA+AGG | 0.639489 | 8.2:+73761509 | None:intergenic |
TTGTAACTGTCACCGGACGG+TGG | 0.641261 | 8.2:-73774837 | MS.gene074443:CDS |
AAAATGGCCAAAGCTAAAGA+CGG | 0.642149 | 8.2:-73771587 | MS.gene074443:CDS |
CGTTTGTAACTGTCACCGGA+CGG | 0.646698 | 8.2:-73774840 | MS.gene074443:CDS |
TTAGCGATCATAAAGCCGGA+TGG | 0.648445 | 8.2:-73761676 | MS.gene074443:CDS |
GGGTTCACTTCTAGGTGTCG+AGG | 0.651015 | 8.2:-73771675 | MS.gene074443:CDS |
GGTATCACCGCGTAACACAT+CGG | 0.659208 | 8.2:+73774997 | None:intergenic |
ATCAGCCGTATGTGTACGGA+CGG | 0.668377 | 8.2:-73774936 | MS.gene074443:CDS |
CAATTGACATTCGAATGCAA+AGG | 0.670629 | 8.2:-73769261 | MS.gene074443:CDS |
AAAGATGGAACCATCTACAG+TGG | 0.671111 | 8.2:-73770316 | MS.gene074443:CDS |
AACCATCTGAAGGACTATTG+GGG | 0.680096 | 8.2:-73767463 | MS.gene074443:CDS |
GTCAGCGCCGATGTGTTACG+CGG | 0.686535 | 8.2:-73775004 | MS.gene074443:CDS |
AGGGTGGCTGACACATGTTG+TGG | 0.691615 | 8.2:-73767416 | MS.gene074443:CDS |
TAACATTATAGCTTTCAATG+GGG | 0.693997 | 8.2:-73770358 | MS.gene074443:CDS |
ATGCCAAAAGTACAAATGCG+GGG | 0.694586 | 8.2:+73769851 | None:intergenic |
AGAAGCGGTATCAACGCCGG+AGG | 0.699312 | 8.2:+73774907 | None:intergenic |
GTAACATGCATGACCTGTGA+GGG | 0.731782 | 8.2:+73760989 | None:intergenic |
CACGTGAGATGTGAATGTGA+AGG | 0.738896 | 8.2:+73763166 | None:intergenic |
AGTAACATGCATGACCTGTG+AGG | 0.780446 | 8.2:+73760988 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 73760804 | 73775151 | 73760804 | ID=MS.gene074443 |
chr8.2 | mRNA | 73760804 | 73775151 | 73760804 | ID=MS.gene074443.t1;Parent=MS.gene074443 |
chr8.2 | exon | 73774771 | 73775151 | 73774771 | ID=MS.gene074443.t1.exon1;Parent=MS.gene074443.t1 |
chr8.2 | CDS | 73774771 | 73775151 | 73774771 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
chr8.2 | exon | 73771544 | 73771696 | 73771544 | ID=MS.gene074443.t1.exon2;Parent=MS.gene074443.t1 |
chr8.2 | CDS | 73771544 | 73771696 | 73771544 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
chr8.2 | exon | 73771234 | 73771446 | 73771234 | ID=MS.gene074443.t1.exon3;Parent=MS.gene074443.t1 |
chr8.2 | CDS | 73771234 | 73771446 | 73771234 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
chr8.2 | exon | 73771017 | 73771106 | 73771017 | ID=MS.gene074443.t1.exon4;Parent=MS.gene074443.t1 |
chr8.2 | CDS | 73771017 | 73771106 | 73771017 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
chr8.2 | exon | 73770775 | 73770891 | 73770775 | ID=MS.gene074443.t1.exon5;Parent=MS.gene074443.t1 |
chr8.2 | CDS | 73770775 | 73770891 | 73770775 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
chr8.2 | exon | 73770233 | 73770502 | 73770233 | ID=MS.gene074443.t1.exon6;Parent=MS.gene074443.t1 |
chr8.2 | CDS | 73770233 | 73770502 | 73770233 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
chr8.2 | exon | 73769849 | 73770008 | 73769849 | ID=MS.gene074443.t1.exon7;Parent=MS.gene074443.t1 |
chr8.2 | CDS | 73769849 | 73770008 | 73769849 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
chr8.2 | exon | 73769605 | 73769682 | 73769605 | ID=MS.gene074443.t1.exon8;Parent=MS.gene074443.t1 |
chr8.2 | CDS | 73769605 | 73769682 | 73769605 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
chr8.2 | exon | 73769186 | 73769286 | 73769186 | ID=MS.gene074443.t1.exon9;Parent=MS.gene074443.t1 |
chr8.2 | CDS | 73769186 | 73769286 | 73769186 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
chr8.2 | exon | 73768862 | 73769032 | 73768862 | ID=MS.gene074443.t1.exon10;Parent=MS.gene074443.t1 |
chr8.2 | CDS | 73768862 | 73769032 | 73768862 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
chr8.2 | exon | 73768265 | 73768339 | 73768265 | ID=MS.gene074443.t1.exon11;Parent=MS.gene074443.t1 |
chr8.2 | CDS | 73768265 | 73768339 | 73768265 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
chr8.2 | exon | 73767889 | 73768002 | 73767889 | ID=MS.gene074443.t1.exon12;Parent=MS.gene074443.t1 |
chr8.2 | CDS | 73767889 | 73768002 | 73767889 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
chr8.2 | exon | 73767388 | 73767615 | 73767388 | ID=MS.gene074443.t1.exon13;Parent=MS.gene074443.t1 |
chr8.2 | CDS | 73767388 | 73767615 | 73767388 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
chr8.2 | exon | 73763162 | 73763247 | 73763162 | ID=MS.gene074443.t1.exon14;Parent=MS.gene074443.t1 |
chr8.2 | CDS | 73763162 | 73763247 | 73763162 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
chr8.2 | exon | 73762849 | 73762926 | 73762849 | ID=MS.gene074443.t1.exon15;Parent=MS.gene074443.t1 |
chr8.2 | CDS | 73762849 | 73762926 | 73762849 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
chr8.2 | exon | 73761511 | 73761741 | 73761511 | ID=MS.gene074443.t1.exon16;Parent=MS.gene074443.t1 |
chr8.2 | CDS | 73761511 | 73761741 | 73761511 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
chr8.2 | exon | 73761003 | 73761110 | 73761003 | ID=MS.gene074443.t1.exon17;Parent=MS.gene074443.t1 |
chr8.2 | CDS | 73761003 | 73761110 | 73761003 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
chr8.2 | exon | 73760804 | 73760921 | 73760804 | ID=MS.gene074443.t1.exon18;Parent=MS.gene074443.t1 |
chr8.2 | CDS | 73760804 | 73760921 | 73760804 | ID=cds.MS.gene074443.t1;Parent=MS.gene074443.t1 |
Gene Sequence |
Protein sequence |