Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051091.t1 | XP_003627333.2 | 93.6 | 753 | 48 | 0 | 1 | 753 | 1 | 753 | 0.00E+00 | 1332.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051091.t1 | Q54DU5 | 25.9 | 255 | 168 | 6 | 321 | 566 | 340 | 582 | 6.0e-18 | 94.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051091.t1 | G7L7M3 | 93.6 | 753 | 48 | 0 | 1 | 753 | 1 | 753 | 0.0e+00 | 1332.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051091 | MS.gene056525 | 0.83766 | 4.56E-57 | -1.69E-46 |
| MS.gene051091 | MS.gene071660 | 0.842597 | 2.35E-58 | -1.69E-46 |
| MS.gene051091 | MS.gene074443 | 0.946754 | 2.52E-105 | -1.69E-46 |
| MS.gene051091 | MS.gene30426 | 0.883256 | 5.23E-71 | -1.69E-46 |
| MS.gene051091 | MS.gene60460 | -0.803043 | 4.21E-49 | -1.69E-46 |
| MS.gene051091 | MS.gene93018 | 0.833264 | 5.89E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051091.t1 | MTR_8g021230 | 94.102 | 746 | 44 | 0 | 1 | 746 | 1 | 746 | 0.0 | 1403 |
| MS.gene051091.t1 | MTR_8g021230 | 93.604 | 641 | 41 | 0 | 1 | 641 | 1 | 641 | 0.0 | 1210 |
| MS.gene051091.t1 | MTR_8g021230 | 94.567 | 589 | 32 | 0 | 158 | 746 | 1 | 589 | 0.0 | 1103 |
| MS.gene051091.t1 | MTR_8g021230 | 93.127 | 582 | 40 | 0 | 1 | 582 | 1 | 582 | 0.0 | 1090 |
| MS.gene051091.t1 | MTR_8g021230 | 94.008 | 484 | 29 | 0 | 158 | 641 | 1 | 484 | 0.0 | 909 |
| MS.gene051091.t1 | MTR_4g125080 | 49.600 | 750 | 370 | 6 | 1 | 746 | 1 | 746 | 0.0 | 709 |
| MS.gene051091.t1 | MTR_2g042570 | 47.278 | 753 | 383 | 7 | 1 | 746 | 1 | 746 | 0.0 | 685 |
| MS.gene051091.t1 | MTR_4g125080 | 53.356 | 581 | 268 | 2 | 1 | 579 | 1 | 580 | 0.0 | 626 |
| MS.gene051091.t1 | MTR_4g125080 | 47.315 | 596 | 308 | 5 | 153 | 746 | 5 | 596 | 0.0 | 533 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051091.t1 | AT1G72500 | 49.737 | 760 | 364 | 6 | 1 | 748 | 1 | 754 | 0.0 | 727 |
| MS.gene051091.t1 | AT1G19110 | 49.340 | 758 | 371 | 6 | 1 | 751 | 1 | 752 | 0.0 | 716 |
| MS.gene051091.t1 | AT1G72500 | 51.974 | 608 | 289 | 2 | 1 | 605 | 1 | 608 | 0.0 | 637 |
| MS.gene051091.t1 | AT1G72500 | 52.144 | 583 | 276 | 2 | 1 | 580 | 1 | 583 | 0.0 | 611 |
Find 156 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGATGCCGTTTATGATTT+AGG | 0.173545 | 8.3:-69968437 | MS.gene051091:intron |
| GAATCTTAACAATGTATATT+TGG | 0.174409 | 8.3:+69970395 | None:intergenic |
| CCTGAACCTGTCAAGGTTAC+TGG | 0.196671 | 8.3:-69967765 | MS.gene051091:CDS |
| ACTGTAGATGGTTCCATCTT+TGG | 0.265622 | 8.3:+69969151 | None:intergenic |
| ACACCCCGCATTTGTACTTT+TGG | 0.274066 | 8.3:-69968687 | MS.gene051091:CDS |
| TGAAACAAACCTTTCTATCT+TGG | 0.278019 | 8.3:+69969612 | None:intergenic |
| TCTGATCTTAACTGAGAAAA+TGG | 0.279654 | 8.3:+69970257 | None:intergenic |
| CATTCTGTCTTTCAGTTTAA+GGG | 0.282341 | 8.3:-69970285 | MS.gene051091:intron |
| GGCTAACAGGGTTCACTTCT+AGG | 0.291976 | 8.3:-69970529 | MS.gene051091:intron |
| GTTTCTTCAAGTGACATATT+TGG | 0.298969 | 8.3:-69969716 | MS.gene051091:CDS |
| GAAATCCCAAAGTTATTTCT+TGG | 0.301433 | 8.3:-69966388 | MS.gene051091:CDS |
| AAAATTGCTTCCACTGTAGA+TGG | 0.320409 | 8.3:+69969139 | None:intergenic |
| TTAGAAATTGTTCTTCCAAC+AGG | 0.322142 | 8.3:+69970159 | None:intergenic |
| TTCTCCAGCTCCGTCGAATT+CGG | 0.322473 | 8.3:-69974002 | MS.gene051091:CDS |
| ATCACCATCAAAAGTTTAGA+AGG | 0.323197 | 8.3:-69968032 | MS.gene051091:CDS |
| CATCTTTGGCGAGAATAAAT+AGG | 0.325085 | 8.3:+69969165 | None:intergenic |
| CAACTTGTGCTAGCATTTGC+AGG | 0.336684 | 8.3:+69968471 | None:intergenic |
| GGTGTCGAGGTCAATGATTT+TGG | 0.341729 | 8.3:-69970508 | MS.gene051091:CDS |
| AATTAGAATTACCTGAGTTA+AGG | 0.346965 | 8.3:+69969054 | None:intergenic |
| AAACCATCTGAAGGACTATT+GGG | 0.347518 | 8.3:-69966295 | MS.gene051091:CDS |
| ATTAGAATTACCTGAGTTAA+GGG | 0.356959 | 8.3:+69969055 | None:intergenic |
| TGTCAAGGTTACTGGTACTT+TGG | 0.366582 | 8.3:-69967757 | MS.gene051091:CDS |
| CCAGTAACCTTGACAGGTTC+AGG | 0.366641 | 8.3:+69967765 | None:intergenic |
| AAAACCATCTGAAGGACTAT+TGG | 0.370662 | 8.3:-69966296 | MS.gene051091:CDS |
| TCCATCAGAGTATACTTTCA+TGG | 0.371580 | 8.3:-69966781 | MS.gene051091:CDS |
| GCAGTGCACGCGCCACCTTC+CGG | 0.374809 | 8.3:+69973710 | None:intergenic |
| GTCCTCCAAGAAATAACTTT+GGG | 0.375977 | 8.3:+69966383 | None:intergenic |
| GGAAGTCCATTGATCATATC+AGG | 0.379044 | 8.3:-69967807 | MS.gene051091:CDS |
| ATAGTATCCGTCTTTAGCTT+TGG | 0.384689 | 8.3:+69970426 | None:intergenic |
| CACACTTAGCTTCAAGGGAT+TGG | 0.388864 | 8.3:-69966416 | MS.gene051091:CDS |
| TGCTATTCCTATCGGAGAAC+AGG | 0.398160 | 8.3:-69973655 | MS.gene051091:intron |
| AATCACTTGATTTCCGTAGT+AGG | 0.403765 | 8.3:+69968811 | None:intergenic |
| CAGCTTCTACTTGTTGTGGT+AGG | 0.406572 | 8.3:-69966267 | MS.gene051091:CDS |
| TTTAGAAGGGCTTGATTCGC+AGG | 0.406929 | 8.3:-69968018 | MS.gene051091:CDS |
| TTTAACATTATAGCTTTCAA+TGG | 0.410831 | 8.3:-69969193 | MS.gene051091:CDS |
| AGAGACCAATTCAGTATGAT+AGG | 0.412096 | 8.3:+69970480 | None:intergenic |
| TCAGGATTGTCTACTATGTC+TGG | 0.414612 | 8.3:+69973855 | None:intergenic |
| TTAACATTATAGCTTTCAAT+GGG | 0.414780 | 8.3:-69969192 | MS.gene051091:CDS |
| AGCAACTAGCCATCCTCTTA+AGG | 0.421032 | 8.3:-69970079 | MS.gene051091:intron |
| AAGATCCTATCATACTGAAT+TGG | 0.421569 | 8.3:-69970485 | MS.gene051091:CDS |
| TATGGATGTTGAGTGTTGTT+TGG | 0.422314 | 8.3:-69973754 | MS.gene051091:CDS |
| CATCAAAATCACGCAGGAAA+GGG | 0.429977 | 8.3:+69969675 | None:intergenic |
| TAATGTTAAATCTATCTTGT+GGG | 0.437567 | 8.3:+69969206 | None:intergenic |
| GTCATCTCCAGTGCTGGAGC+TGG | 0.439724 | 8.3:+69973936 | None:intergenic |
| TTACTGGTACTTTGGCAGAT+AGG | 0.448795 | 8.3:-69967749 | MS.gene051091:CDS |
| TGGAGATTTCCAAGATAGAA+AGG | 0.451298 | 8.3:-69969621 | MS.gene051091:intron |
| CATATTCCTGACCTATCATC+TGG | 0.453930 | 8.3:-69967828 | MS.gene051091:CDS |
| ACCTAGTCACTGCTCGTGCC+TGG | 0.457687 | 8.3:-69967125 | MS.gene051091:CDS |
| AGCTTCTACTTGTTGTGGTA+GGG | 0.458348 | 8.3:-69966266 | MS.gene051091:CDS |
| AGTCCTCCAAGAAATAACTT+TGG | 0.461508 | 8.3:+69966382 | None:intergenic |
| TTTCTATCTTGGAAATCTCC+AGG | 0.463744 | 8.3:+69969623 | None:intergenic |
| ATACTGACCTAAATCATAAA+CGG | 0.464375 | 8.3:+69968430 | None:intergenic |
| CTATTTATTCTCGCCAAAGA+TGG | 0.467675 | 8.3:-69969164 | MS.gene051091:CDS |
| TGAAGCATTTCTGTTACAAA+AGG | 0.468309 | 8.3:-69966718 | MS.gene051091:intron |
| ATACGGCACACTTAGCTTCA+AGG | 0.469413 | 8.3:-69966422 | MS.gene051091:CDS |
| CCAACAGGGTTGACATATGA+AGG | 0.471397 | 8.3:+69970174 | None:intergenic |
| TACTGAATTGGTCTCTCTAA+AGG | 0.474967 | 8.3:-69970473 | MS.gene051091:CDS |
| AAGTCAAGAGCTGGAGGAGA+AGG | 0.477873 | 8.3:-69967094 | MS.gene051091:intron |
| CATATGAAGGAAAGCAGAAA+GGG | 0.479606 | 8.3:+69970187 | None:intergenic |
| ATCCCAAAGTTATTTCTTGG+AGG | 0.479788 | 8.3:-69966385 | MS.gene051091:CDS |
| GTACGGACGGTGTGATCCTC+CGG | 0.480955 | 8.3:-69973808 | MS.gene051091:CDS |
| GGTTGATAGCTACGAATGTC+AGG | 0.483644 | 8.3:+69973837 | None:intergenic |
| TGCAAATGCTAGCACAAGTT+GGG | 0.484188 | 8.3:-69968469 | MS.gene051091:CDS |
| ATCAGCTCCAGCTCCAGCAC+TGG | 0.488897 | 8.3:-69973943 | MS.gene051091:CDS |
| ATCACTTGATTTCCGTAGTA+GGG | 0.489549 | 8.3:+69968812 | None:intergenic |
| TGTTGAGTGTTGTTTGGATA+CGG | 0.494044 | 8.3:-69973748 | MS.gene051091:CDS |
| CTGCAAATGCTAGCACAAGT+TGG | 0.495096 | 8.3:-69968470 | MS.gene051091:CDS |
| TTGTCTACTATGTCTGGATC+AGG | 0.502075 | 8.3:+69973861 | None:intergenic |
| GACCTCGTCATCTCCAGTGC+TGG | 0.505015 | 8.3:+69973930 | None:intergenic |
| GATAGGTCAGGAATATGAGT+TGG | 0.508136 | 8.3:+69967834 | None:intergenic |
| CCTTCATATGTCAACCCTGT+TGG | 0.511443 | 8.3:-69970174 | MS.gene051091:CDS |
| GCTATTCAGTACTGCTTCAT+CGG | 0.511835 | 8.3:-69968069 | MS.gene051091:CDS |
| TTCCCCAATAGTCCTTCAGA+TGG | 0.513937 | 8.3:+69966292 | None:intergenic |
| TATGCCAAAAGTACAAATGC+GGG | 0.514199 | 8.3:+69968683 | None:intergenic |
| TATCTACCTGATATGATCAA+TGG | 0.514581 | 8.3:+69967801 | None:intergenic |
| AAAAGTAGTGTCAACCCACT+TGG | 0.517833 | 8.3:+69969108 | None:intergenic |
| AAAGTACCAGTAACCTTGAC+AGG | 0.517936 | 8.3:+69967759 | None:intergenic |
| TTTAAGGTCCATTACAAAGC+TGG | 0.519691 | 8.3:+69967725 | None:intergenic |
| CAGGGAGTAATGCGCCAAGC+TGG | 0.523181 | 8.3:-69969934 | MS.gene051091:CDS |
| GATATAAGTGCAAGCATGAA+GGG | 0.523293 | 8.3:-69969283 | MS.gene051091:CDS |
| AAGGCAGCTTCTACTTGTTG+TGG | 0.524207 | 8.3:-69966271 | MS.gene051091:CDS |
| TCTTCAAGTGACATATTTGG+CGG | 0.525075 | 8.3:-69969713 | MS.gene051091:CDS |
| TTTCTTGGAGGACTGAGTCA+TGG | 0.526665 | 8.3:-69966373 | MS.gene051091:CDS |
| ATAGGTCAGGAATATGAGTT+GGG | 0.530384 | 8.3:+69967835 | None:intergenic |
| TCAATGGACTTCCAGATGAT+AGG | 0.532454 | 8.3:+69967817 | None:intergenic |
| ACAAAGTTGAGTGCAAACTA+TGG | 0.532632 | 8.3:+69966180 | None:intergenic |
| ATCAAAATCACGCAGGAAAG+GGG | 0.535748 | 8.3:+69969676 | None:intergenic |
| ACATATGAAGGAAAGCAGAA+AGG | 0.535767 | 8.3:+69970186 | None:intergenic |
| CCTTAAAGTGAAGAGAGAAA+AGG | 0.535955 | 8.3:-69967709 | MS.gene051091:CDS |
| TCATCAAAATCACGCAGGAA+AGG | 0.536360 | 8.3:+69969674 | None:intergenic |
| TGAAAATGCAAAGAATGCAT+TGG | 0.536617 | 8.3:-69969251 | MS.gene051091:CDS |
| GACGGAGCTGGAGAATTGTC+CGG | 0.541011 | 8.3:+69974010 | None:intergenic |
| GTGAAAAGCTATGTAACGAG+TGG | 0.541602 | 8.3:-69968723 | MS.gene051091:CDS |
| GGACTTCCAGATGATAGGTC+AGG | 0.542631 | 8.3:+69967822 | None:intergenic |
| TGTCAAGTTGCTATTCCTAT+CGG | 0.543241 | 8.3:-69973663 | MS.gene051091:CDS |
| TTCTACTTGTTGTGGTAGGG+TGG | 0.543772 | 8.3:-69966263 | MS.gene051091:CDS |
| AAATCATCATCTCCGATGGC+CGG | 0.544530 | 8.3:-69974029 | None:intergenic |
| AGATAGGACCAGCTTTGTAA+TGG | 0.544811 | 8.3:-69967733 | MS.gene051091:CDS |
| ATAATGTTAAATCTATCTTG+TGG | 0.545247 | 8.3:+69969205 | None:intergenic |
| TACGGCACACTTAGCTTCAA+GGG | 0.545418 | 8.3:-69966421 | MS.gene051091:CDS |
| GAGACCGAATTCGACGGAGC+TGG | 0.547103 | 8.3:+69973998 | None:intergenic |
| CATTATAGCTTTCAATGGGG+AGG | 0.549379 | 8.3:-69969188 | MS.gene051091:CDS |
| TCCATGAAAGTATACTCTGA+TGG | 0.549476 | 8.3:+69966780 | None:intergenic |
| TGGCGCGTGCACTGCGTGAG+GGG | 0.552301 | 8.3:-69973702 | MS.gene051091:CDS |
| AGATATAAGTGCAAGCATGA+AGG | 0.552750 | 8.3:-69969284 | MS.gene051091:CDS |
| TTCTATCTTGGAAATCTCCA+GGG | 0.561104 | 8.3:+69969624 | None:intergenic |
| TCTGTCTTTCAGTTTAAGGG+AGG | 0.561701 | 8.3:-69970282 | MS.gene051091:intron |
| GTGGCGCGTGCACTGCGTGA+GGG | 0.562092 | 8.3:-69973703 | MS.gene051091:CDS |
| GGTGGCGCGTGCACTGCGTG+AGG | 0.563903 | 8.3:-69973704 | MS.gene051091:CDS |
| CTGGAGAATTGTCCGGCCAT+CGG | 0.568446 | 8.3:+69974017 | None:intergenic |
| ACCTCTTCAAAACAGGCATA+CGG | 0.569071 | 8.3:-69966439 | MS.gene051091:intron |
| ATACATTGTTAAGATTCCAC+AGG | 0.569514 | 8.3:-69970389 | MS.gene051091:intron |
| ATGAAGCAGTGGTACCAGCT+TGG | 0.574873 | 8.3:-69969894 | MS.gene051091:CDS |
| TCTGCTTCATGAAATCGCTA+TGG | 0.576529 | 8.3:-69973772 | MS.gene051091:CDS |
| CTTAGGCAATGACCCTACTA+CGG | 0.577577 | 8.3:-69968824 | MS.gene051091:intron |
| TAGAAATTGTTCTTCCAACA+GGG | 0.578623 | 8.3:+69970160 | None:intergenic |
| AGCTATCAACCGTATGTGTA+CGG | 0.580945 | 8.3:-69973825 | MS.gene051091:CDS |
| CAGAAAATATTATTTCGTGA+TGG | 0.583246 | 8.3:-69970228 | MS.gene051091:CDS |
| ACGGCGTTTGTAACTGTCAC+CGG | 0.584518 | 8.3:-69973729 | MS.gene051091:CDS |
| CATCATGCTTCCCTTAACTC+AGG | 0.588707 | 8.3:-69969065 | MS.gene051091:intron |
| AATGCTAGCACAAGTTGGGA+GGG | 0.591115 | 8.3:-69968465 | MS.gene051091:CDS |
| TCACCATCAAAAGTTTAGAA+GGG | 0.591609 | 8.3:-69968031 | MS.gene051091:CDS |
| AGACTTCAGTTTCTCGTACA+CGG | 0.595292 | 8.3:-69969863 | MS.gene051091:intron |
| ACCAGGCACGAGCAGTGACT+AGG | 0.603982 | 8.3:+69967124 | None:intergenic |
| TTGTAACTGTCACCGGAAGG+TGG | 0.607590 | 8.3:-69973722 | MS.gene051091:CDS |
| AAGTCTGTACTTGACCAAGC+TGG | 0.608653 | 8.3:+69969880 | None:intergenic |
| GCGATTTCATGAAGCAGAAG+CGG | 0.608981 | 8.3:+69973777 | None:intergenic |
| CTCTTTCATCAAAATCACGC+AGG | 0.609657 | 8.3:+69969669 | None:intergenic |
| AAAGAAGCAAAACCATCTGA+AGG | 0.611520 | 8.3:-69966304 | MS.gene051091:CDS |
| AAATGCTAGCACAAGTTGGG+AGG | 0.611778 | 8.3:-69968466 | MS.gene051091:CDS |
| ATCTGAAGGACTATTGGGGA+AGG | 0.612930 | 8.3:-69966290 | MS.gene051091:CDS |
| AAGTTTATCATATGAAGCAG+TGG | 0.615020 | 8.3:-69969905 | MS.gene051091:CDS |
| TGAAAAGCTATGTAACGAGT+GGG | 0.616349 | 8.3:-69968722 | MS.gene051091:CDS |
| GCGTAACACATCAGCGCTGA+CGG | 0.616630 | 8.3:+69973891 | None:intergenic |
| CTCCAGCACTGGAGATGACG+AGG | 0.618219 | 8.3:-69973932 | MS.gene051091:CDS |
| TCACACCGTCCGTACACATA+CGG | 0.620071 | 8.3:+69973816 | None:intergenic |
| ATCATATCAGGTAGATACAG+TGG | 0.630988 | 8.3:-69967795 | MS.gene051091:CDS |
| GAGGTTGAGACCGAATTCGA+CGG | 0.633131 | 8.3:+69973992 | None:intergenic |
| AGCAGAAGCGGTATCAACGC+CGG | 0.634129 | 8.3:+69973789 | None:intergenic |
| CTATGCCAAAAGTACAAATG+CGG | 0.636565 | 8.3:+69968682 | None:intergenic |
| AGAAGGGCTTGATTCGCAGG+AGG | 0.636977 | 8.3:-69968015 | MS.gene051091:intron |
| ATGCTAGCACAAGTTGGGAG+GGG | 0.638225 | 8.3:-69968464 | MS.gene051091:CDS |
| AAAATGGCCAAAGCTAAAGA+CGG | 0.642149 | 8.3:-69970433 | MS.gene051091:CDS |
| ATCAACCGTATGTGTACGGA+CGG | 0.645483 | 8.3:-69973821 | MS.gene051091:CDS |
| GGGTTCACTTCTAGGTGTCG+AGG | 0.651015 | 8.3:-69970521 | MS.gene051091:CDS |
| AACACATCAGCGCTGACGGT+AGG | 0.656073 | 8.3:+69973895 | None:intergenic |
| GGAGGACTGAGTCATGGATG+TGG | 0.656850 | 8.3:-69966367 | MS.gene051091:CDS |
| CGTTTGTAACTGTCACCGGA+AGG | 0.659393 | 8.3:-69973725 | MS.gene051091:CDS |
| CAATTGACATTCGAATGCAA+AGG | 0.670629 | 8.3:-69968091 | MS.gene051091:CDS |
| AAAGATGGAACCATCTACAG+TGG | 0.671111 | 8.3:-69969149 | MS.gene051091:CDS |
| AACCATCTGAAGGACTATTG+GGG | 0.680096 | 8.3:-69966294 | MS.gene051091:CDS |
| AGGGTGGCTGACACATGTTG+TGG | 0.691615 | 8.3:-69966247 | MS.gene051091:CDS |
| TAACATTATAGCTTTCAATG+GGG | 0.693997 | 8.3:-69969191 | MS.gene051091:CDS |
| ATGCCAAAAGTACAAATGCG+GGG | 0.694586 | 8.3:+69968684 | None:intergenic |
| AGAAGCGGTATCAACGCCGG+AGG | 0.699312 | 8.3:+69973792 | None:intergenic |
| GTCAGCGCTGATGTGTTACG+CGG | 0.741998 | 8.3:-69973889 | MS.gene051091:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 69966108 | 69974036 | 69966108 | ID=MS.gene051091 |
| chr8.3 | mRNA | 69966108 | 69974036 | 69966108 | ID=MS.gene051091.t1;Parent=MS.gene051091 |
| chr8.3 | exon | 69973656 | 69974036 | 69973656 | ID=MS.gene051091.t1.exon1;Parent=MS.gene051091.t1 |
| chr8.3 | CDS | 69973656 | 69974036 | 69973656 | ID=cds.MS.gene051091.t1;Parent=MS.gene051091.t1 |
| chr8.3 | exon | 69970390 | 69970542 | 69970390 | ID=MS.gene051091.t1.exon2;Parent=MS.gene051091.t1 |
| chr8.3 | CDS | 69970390 | 69970542 | 69970390 | ID=cds.MS.gene051091.t1;Parent=MS.gene051091.t1 |
| chr8.3 | exon | 69970080 | 69970292 | 69970080 | ID=MS.gene051091.t1.exon3;Parent=MS.gene051091.t1 |
| chr8.3 | CDS | 69970080 | 69970292 | 69970080 | ID=cds.MS.gene051091.t1;Parent=MS.gene051091.t1 |
| chr8.3 | exon | 69969864 | 69969953 | 69969864 | ID=MS.gene051091.t1.exon4;Parent=MS.gene051091.t1 |
| chr8.3 | CDS | 69969864 | 69969953 | 69969864 | ID=cds.MS.gene051091.t1;Parent=MS.gene051091.t1 |
| chr8.3 | exon | 69969622 | 69969738 | 69969622 | ID=MS.gene051091.t1.exon5;Parent=MS.gene051091.t1 |
| chr8.3 | CDS | 69969622 | 69969738 | 69969622 | ID=cds.MS.gene051091.t1;Parent=MS.gene051091.t1 |
| chr8.3 | exon | 69969066 | 69969335 | 69969066 | ID=MS.gene051091.t1.exon6;Parent=MS.gene051091.t1 |
| chr8.3 | CDS | 69969066 | 69969335 | 69969066 | ID=cds.MS.gene051091.t1;Parent=MS.gene051091.t1 |
| chr8.3 | exon | 69968682 | 69968841 | 69968682 | ID=MS.gene051091.t1.exon7;Parent=MS.gene051091.t1 |
| chr8.3 | CDS | 69968682 | 69968841 | 69968682 | ID=cds.MS.gene051091.t1;Parent=MS.gene051091.t1 |
| chr8.3 | exon | 69968438 | 69968515 | 69968438 | ID=MS.gene051091.t1.exon8;Parent=MS.gene051091.t1 |
| chr8.3 | CDS | 69968438 | 69968515 | 69968438 | ID=cds.MS.gene051091.t1;Parent=MS.gene051091.t1 |
| chr8.3 | exon | 69968016 | 69968116 | 69968016 | ID=MS.gene051091.t1.exon9;Parent=MS.gene051091.t1 |
| chr8.3 | CDS | 69968016 | 69968116 | 69968016 | ID=cds.MS.gene051091.t1;Parent=MS.gene051091.t1 |
| chr8.3 | exon | 69967692 | 69967862 | 69967692 | ID=MS.gene051091.t1.exon10;Parent=MS.gene051091.t1 |
| chr8.3 | CDS | 69967692 | 69967862 | 69967692 | ID=cds.MS.gene051091.t1;Parent=MS.gene051091.t1 |
| chr8.3 | exon | 69967095 | 69967169 | 69967095 | ID=MS.gene051091.t1.exon11;Parent=MS.gene051091.t1 |
| chr8.3 | CDS | 69967095 | 69967169 | 69967095 | ID=cds.MS.gene051091.t1;Parent=MS.gene051091.t1 |
| chr8.3 | exon | 69966719 | 69966832 | 69966719 | ID=MS.gene051091.t1.exon12;Parent=MS.gene051091.t1 |
| chr8.3 | CDS | 69966719 | 69966832 | 69966719 | ID=cds.MS.gene051091.t1;Parent=MS.gene051091.t1 |
| chr8.3 | exon | 69966108 | 69966446 | 69966108 | ID=MS.gene051091.t1.exon13;Parent=MS.gene051091.t1 |
| chr8.3 | CDS | 69966108 | 69966446 | 69966108 | ID=cds.MS.gene051091.t1;Parent=MS.gene051091.t1 |
| Gene Sequence |
| Protein sequence |
