Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059896.t1 | XP_003596474.1 | 91.1 | 474 | 42 | 0 | 1 | 474 | 1 | 474 | 3.30E-239 | 837.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059896.t1 | Q9FL69 | 53.3 | 493 | 199 | 10 | 1 | 473 | 1 | 482 | 3.1e-121 | 436.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059896.t1 | G7IR44 | 91.1 | 474 | 42 | 0 | 1 | 474 | 1 | 474 | 2.3e-239 | 837.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene055358 | MS.gene059896 | -0.811691 | 6.17E-51 | -1.69E-46 |
MS.gene059896 | MS.gene061114 | 0.815702 | 8.07E-52 | -1.69E-46 |
MS.gene059896 | MS.gene068304 | 0.822352 | 2.48E-53 | -1.69E-46 |
MS.gene059896 | MS.gene070573 | 0.834369 | 3.12E-56 | -1.69E-46 |
MS.gene059896 | MS.gene071772 | -0.805121 | 1.56E-49 | -1.69E-46 |
MS.gene059896 | MS.gene072584 | -0.807597 | 4.68E-50 | -1.69E-46 |
MS.gene059896 | MS.gene074443 | -0.80539 | 1.37E-49 | -1.69E-46 |
MS.gene059896 | MS.gene08324 | 0.800235 | 1.59E-48 | -1.69E-46 |
MS.gene059896 | MS.gene21597 | 0.819524 | 1.11E-52 | -1.69E-46 |
MS.gene059896 | MS.gene22453 | 0.818758 | 1.66E-52 | -1.69E-46 |
MS.gene059896 | MS.gene27239 | 0.816049 | 6.76E-52 | -1.69E-46 |
MS.gene059896 | MS.gene27965 | 0.822577 | 2.20E-53 | -1.69E-46 |
MS.gene059896 | MS.gene29926 | 0.818804 | 1.62E-52 | -1.69E-46 |
MS.gene059896 | MS.gene31726 | 0.866505 | 2.71E-65 | -1.69E-46 |
MS.gene059896 | MS.gene32423 | 0.843504 | 1.35E-58 | -1.69E-46 |
MS.gene059896 | MS.gene41668 | 0.805529 | 1.28E-49 | -1.69E-46 |
MS.gene059896 | MS.gene43053 | 0.822501 | 2.29E-53 | -1.69E-46 |
MS.gene059896 | MS.gene43816 | -0.803084 | 4.13E-49 | -1.69E-46 |
MS.gene059896 | MS.gene43820 | -0.810596 | 1.07E-50 | -1.69E-46 |
MS.gene059896 | MS.gene44474 | 0.807903 | 4.03E-50 | -1.69E-46 |
MS.gene059896 | MS.gene44841 | 0.801222 | 9.97E-49 | -1.69E-46 |
MS.gene059896 | MS.gene45199 | 0.825134 | 5.53E-54 | -1.69E-46 |
MS.gene059896 | MS.gene45200 | 0.829148 | 6.05E-55 | -1.69E-46 |
MS.gene059896 | MS.gene53971 | -0.812653 | 3.80E-51 | -1.69E-46 |
MS.gene059896 | MS.gene59097 | 0.808841 | 2.54E-50 | -1.69E-46 |
MS.gene059896 | MS.gene61547 | 0.809165 | 2.17E-50 | -1.69E-46 |
MS.gene059896 | MS.gene65084 | 0.822264 | 2.60E-53 | -1.69E-46 |
MS.gene059896 | MS.gene66082 | 0.817224 | 3.68E-52 | -1.69E-46 |
MS.gene059896 | MS.gene67557 | 0.821894 | 3.17E-53 | -1.69E-46 |
MS.gene059896 | MS.gene69238 | -0.812522 | 4.06E-51 | -1.69E-46 |
MS.gene059896 | MS.gene72900 | 0.820896 | 5.38E-53 | -1.69E-46 |
MS.gene059896 | MS.gene76773 | 0.802337 | 5.89E-49 | -1.69E-46 |
MS.gene059896 | MS.gene77445 | 0.867518 | 1.29E-65 | -1.69E-46 |
MS.gene059896 | MS.gene83831 | -0.80519 | 1.50E-49 | -1.69E-46 |
MS.gene059896 | MS.gene90118 | 0.801969 | 7.01E-49 | -1.69E-46 |
MS.gene059896 | MS.gene91807 | -0.807743 | 4.36E-50 | -1.69E-46 |
MS.gene059896 | MS.gene93500 | -0.836968 | 6.85E-57 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene81379 | MS.gene059896 | PPI |
MS.gene63889 | MS.gene059896 | PPI |
MS.gene020722 | MS.gene059896 | PPI |
MS.gene020723 | MS.gene059896 | PPI |
MS.gene48056 | MS.gene059896 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059896.t1 | MTR_2g080950 | 95.781 | 474 | 20 | 0 | 1 | 474 | 1 | 474 | 0.0 | 921 |
MS.gene059896.t1 | MTR_2g080950 | 95.272 | 423 | 20 | 0 | 52 | 474 | 1 | 423 | 0.0 | 811 |
MS.gene059896.t1 | MTR_2g080950 | 94.845 | 388 | 20 | 0 | 87 | 474 | 1 | 388 | 0.0 | 736 |
MS.gene059896.t1 | MTR_8g464390 | 71.757 | 478 | 118 | 6 | 1 | 473 | 1 | 466 | 0.0 | 610 |
MS.gene059896.t1 | MTR_8g464390 | 69.087 | 427 | 115 | 6 | 52 | 473 | 1 | 415 | 2.09e-177 | 503 |
MS.gene059896.t1 | MTR_6g080710 | 48.617 | 253 | 107 | 6 | 1 | 250 | 1 | 233 | 1.27e-68 | 220 |
MS.gene059896.t1 | MTR_2g030230 | 48.246 | 114 | 51 | 2 | 13 | 118 | 15 | 128 | 8.36e-28 | 113 |
MS.gene059896.t1 | MTR_8g088320 | 44.828 | 116 | 56 | 2 | 16 | 123 | 9 | 124 | 9.32e-27 | 110 |
MS.gene059896.t1 | MTR_4g074170 | 44.444 | 135 | 53 | 4 | 18 | 133 | 484 | 615 | 2.22e-26 | 113 |
MS.gene059896.t1 | MTR_7g020860 | 41.259 | 143 | 53 | 3 | 14 | 125 | 500 | 642 | 1.45e-25 | 110 |
MS.gene059896.t1 | MTR_8g100100 | 40.559 | 143 | 54 | 3 | 14 | 125 | 492 | 634 | 1.02e-24 | 108 |
MS.gene059896.t1 | MTR_8g100100 | 40.559 | 143 | 54 | 3 | 14 | 125 | 498 | 640 | 1.09e-24 | 108 |
MS.gene059896.t1 | MTR_7g020860 | 53.933 | 89 | 39 | 1 | 14 | 100 | 500 | 588 | 3.17e-24 | 106 |
MS.gene059896.t1 | MTR_8g038400 | 42.857 | 133 | 66 | 4 | 9 | 132 | 11 | 142 | 3.81e-24 | 103 |
MS.gene059896.t1 | MTR_3g017500 | 42.623 | 122 | 62 | 3 | 19 | 132 | 24 | 145 | 5.43e-24 | 103 |
MS.gene059896.t1 | MTR_3g017500 | 42.623 | 122 | 62 | 3 | 19 | 132 | 54 | 175 | 1.16e-23 | 103 |
MS.gene059896.t1 | MTR_8g067080 | 50.633 | 79 | 39 | 0 | 18 | 96 | 12 | 90 | 9.43e-23 | 100 |
MS.gene059896.t1 | MTR_8g067080 | 50.633 | 79 | 39 | 0 | 18 | 96 | 12 | 90 | 9.89e-23 | 100 |
MS.gene059896.t1 | MTR_8g471110 | 50.633 | 79 | 39 | 0 | 18 | 96 | 12 | 90 | 9.89e-23 | 100 |
MS.gene059896.t1 | MTR_3g098680 | 40.580 | 138 | 51 | 3 | 19 | 125 | 500 | 637 | 1.17e-22 | 102 |
MS.gene059896.t1 | MTR_8g067090 | 50.602 | 83 | 40 | 1 | 16 | 97 | 9 | 91 | 4.00e-22 | 98.6 |
MS.gene059896.t1 | MTR_8g471120 | 50.602 | 83 | 40 | 1 | 16 | 97 | 9 | 91 | 4.00e-22 | 98.6 |
MS.gene059896.t1 | MTR_1g069000 | 48.101 | 79 | 41 | 0 | 17 | 95 | 5 | 83 | 2.62e-20 | 94.0 |
MS.gene059896.t1 | MTR_7g099830 | 48.052 | 77 | 40 | 0 | 19 | 95 | 7 | 83 | 5.83e-20 | 92.4 |
MS.gene059896.t1 | MTR_8g103750 | 30.435 | 161 | 100 | 5 | 14 | 166 | 10 | 166 | 1.74e-17 | 85.9 |
MS.gene059896.t1 | MTR_6g086630 | 28.221 | 163 | 107 | 3 | 12 | 167 | 8 | 167 | 7.85e-17 | 83.6 |
MS.gene059896.t1 | MTR_6g027300 | 29.747 | 158 | 94 | 6 | 21 | 167 | 16 | 167 | 2.05e-14 | 76.3 |
MS.gene059896.t1 | MTR_6g027300 | 29.747 | 158 | 94 | 6 | 21 | 167 | 16 | 167 | 2.44e-14 | 75.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059896.t1 | AT5G54310 | 57.028 | 498 | 175 | 15 | 1 | 474 | 1 | 483 | 4.88e-166 | 477 |
MS.gene059896.t1 | AT3G17660 | 76.613 | 124 | 29 | 0 | 1 | 124 | 1 | 124 | 1.59e-68 | 217 |
MS.gene059896.t1 | AT3G17660 | 76.613 | 124 | 29 | 0 | 1 | 124 | 1 | 124 | 5.86e-68 | 217 |
MS.gene059896.t1 | AT3G17660 | 76.613 | 124 | 29 | 0 | 1 | 124 | 1 | 124 | 1.72e-67 | 216 |
MS.gene059896.t1 | AT3G17660 | 65.323 | 124 | 33 | 1 | 1 | 124 | 1 | 114 | 2.72e-52 | 176 |
MS.gene059896.t1 | AT3G17660 | 72.603 | 73 | 20 | 0 | 52 | 124 | 1 | 73 | 4.05e-33 | 124 |
MS.gene059896.t1 | AT4G05330 | 51.351 | 111 | 46 | 2 | 16 | 118 | 15 | 125 | 5.62e-29 | 117 |
MS.gene059896.t1 | AT4G05330 | 51.351 | 111 | 46 | 2 | 16 | 118 | 15 | 125 | 5.62e-29 | 117 |
MS.gene059896.t1 | AT4G21160 | 43.382 | 136 | 61 | 3 | 16 | 135 | 15 | 150 | 6.12e-27 | 111 |
MS.gene059896.t1 | AT4G21160 | 43.382 | 136 | 61 | 3 | 16 | 135 | 15 | 150 | 6.12e-27 | 111 |
MS.gene059896.t1 | AT4G21160 | 43.382 | 136 | 61 | 3 | 16 | 135 | 15 | 150 | 6.12e-27 | 111 |
MS.gene059896.t1 | AT4G21160 | 43.382 | 136 | 61 | 3 | 16 | 135 | 15 | 150 | 6.12e-27 | 111 |
MS.gene059896.t1 | AT5G13300 | 38.776 | 147 | 62 | 3 | 14 | 132 | 499 | 645 | 1.90e-25 | 110 |
MS.gene059896.t1 | AT3G07940 | 46.610 | 118 | 54 | 4 | 19 | 127 | 50 | 167 | 2.23e-24 | 102 |
MS.gene059896.t1 | AT3G07940 | 46.610 | 118 | 54 | 4 | 19 | 127 | 50 | 167 | 8.71e-24 | 103 |
MS.gene059896.t1 | AT1G60860 | 46.729 | 107 | 53 | 3 | 1 | 105 | 342 | 446 | 1.09e-23 | 105 |
MS.gene059896.t1 | AT1G60860 | 46.729 | 107 | 53 | 3 | 1 | 105 | 282 | 386 | 1.13e-23 | 104 |
MS.gene059896.t1 | AT1G60860 | 46.729 | 107 | 53 | 3 | 1 | 105 | 453 | 557 | 1.16e-23 | 105 |
MS.gene059896.t1 | AT5G61980 | 53.333 | 90 | 40 | 1 | 13 | 100 | 495 | 584 | 1.38e-23 | 104 |
MS.gene059896.t1 | AT1G10870 | 50.000 | 94 | 42 | 2 | 18 | 109 | 472 | 562 | 3.37e-22 | 100 |
MS.gene059896.t1 | AT1G10870 | 52.222 | 90 | 36 | 3 | 18 | 105 | 472 | 556 | 4.27e-22 | 100 |
MS.gene059896.t1 | AT3G53710 | 51.948 | 77 | 37 | 0 | 19 | 95 | 7 | 83 | 5.73e-22 | 98.6 |
MS.gene059896.t1 | AT3G53710 | 51.948 | 77 | 37 | 0 | 19 | 95 | 7 | 83 | 5.73e-22 | 98.6 |
MS.gene059896.t1 | AT3G53710 | 51.948 | 77 | 37 | 0 | 19 | 95 | 7 | 83 | 5.73e-22 | 98.6 |
MS.gene059896.t1 | AT2G37550 | 50.649 | 77 | 38 | 0 | 19 | 95 | 7 | 83 | 1.38e-21 | 97.4 |
MS.gene059896.t1 | AT2G37550 | 50.649 | 77 | 38 | 0 | 19 | 95 | 7 | 83 | 1.38e-21 | 97.4 |
MS.gene059896.t1 | AT2G35210 | 45.361 | 97 | 42 | 1 | 1 | 97 | 6 | 91 | 1.51e-21 | 96.7 |
MS.gene059896.t1 | AT5G46750 | 50.000 | 80 | 40 | 0 | 18 | 97 | 12 | 91 | 1.59e-21 | 96.7 |
MS.gene059896.t1 | AT2G35210 | 45.361 | 97 | 42 | 1 | 1 | 97 | 6 | 91 | 1.67e-21 | 96.7 |
MS.gene059896.t1 | AT4G17890 | 48.750 | 80 | 41 | 0 | 18 | 97 | 15 | 94 | 4.79e-21 | 95.1 |
MS.gene059896.t1 | AT4G17890 | 48.750 | 80 | 41 | 0 | 18 | 97 | 15 | 94 | 6.89e-21 | 95.1 |
MS.gene059896.t1 | AT4G32630 | 33.846 | 130 | 76 | 3 | 16 | 138 | 8 | 134 | 1.34e-18 | 89.4 |
MS.gene059896.t1 | AT4G32630 | 33.846 | 130 | 76 | 3 | 16 | 138 | 8 | 134 | 1.35e-18 | 89.4 |
MS.gene059896.t1 | AT4G32630 | 33.846 | 130 | 76 | 3 | 16 | 138 | 8 | 134 | 1.35e-18 | 89.4 |
MS.gene059896.t1 | AT4G32630 | 33.846 | 130 | 76 | 3 | 16 | 138 | 8 | 134 | 1.35e-18 | 89.4 |
MS.gene059896.t1 | AT4G32630 | 33.846 | 130 | 76 | 3 | 16 | 138 | 8 | 134 | 1.35e-18 | 89.4 |
MS.gene059896.t1 | AT4G32630 | 33.846 | 130 | 76 | 3 | 16 | 138 | 8 | 134 | 1.35e-18 | 89.4 |
MS.gene059896.t1 | AT4G05330 | 47.253 | 91 | 40 | 2 | 41 | 123 | 5 | 95 | 5.88e-18 | 84.7 |
MS.gene059896.t1 | AT1G08680 | 28.402 | 169 | 108 | 5 | 8 | 167 | 4 | 168 | 5.18e-17 | 84.3 |
MS.gene059896.t1 | AT1G08680 | 28.402 | 169 | 108 | 5 | 8 | 167 | 4 | 168 | 6.06e-17 | 84.0 |
MS.gene059896.t1 | AT1G08680 | 28.402 | 169 | 108 | 5 | 8 | 167 | 4 | 168 | 6.06e-17 | 84.0 |
MS.gene059896.t1 | AT1G08680 | 28.402 | 169 | 108 | 5 | 8 | 167 | 4 | 168 | 6.26e-17 | 84.0 |
MS.gene059896.t1 | AT1G08680 | 28.402 | 169 | 108 | 5 | 8 | 167 | 4 | 168 | 6.50e-17 | 84.0 |
MS.gene059896.t1 | AT4G13350 | 28.906 | 128 | 81 | 2 | 12 | 132 | 8 | 132 | 2.15e-15 | 79.3 |
MS.gene059896.t1 | AT4G13350 | 28.906 | 128 | 81 | 2 | 12 | 132 | 8 | 132 | 2.15e-15 | 79.3 |
Find 130 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCCAGTAGCCGGCCAATTT+TGG | 0.197676 | 2.2:+15086442 | None:intergenic |
GCTTGTTGTTGCGGGGTTAC+TGG | 0.226729 | 2.2:+15087439 | None:intergenic |
CCAATGTTTCTGTCCAAAAT+TGG | 0.244837 | 2.2:-15086455 | MS.gene059896:CDS |
TCCATTTGTTGCAGTTTCTA+TGG | 0.252468 | 2.2:-15085625 | MS.gene059896:intron |
AACGTTGGCCTTTCCGTTCA+TGG | 0.276363 | 2.2:+15090735 | None:intergenic |
AAGTTTCAGCTTGTTGTTGC+GGG | 0.294689 | 2.2:+15087431 | None:intergenic |
AGTAGCGCCCATTGGTGTTC+AGG | 0.303173 | 2.2:-15086406 | MS.gene059896:CDS |
TTCAGGAATACATCGAAGTT+TGG | 0.313410 | 2.2:-15089125 | MS.gene059896:CDS |
GCTACTGGATTCCCGATATC+TGG | 0.326788 | 2.2:-15086429 | MS.gene059896:CDS |
TGTTGCAGTTTCTATGGTAT+AGG | 0.341844 | 2.2:-15085619 | MS.gene059896:intron |
GTTGCAGTTTCTATGGTATA+GGG | 0.342366 | 2.2:-15085618 | MS.gene059896:intron |
GTGTTTGGCGTTAAGCTCTT+TGG | 0.344571 | 2.2:+15090711 | None:intergenic |
ATATGCTGGTGTCATGTTCC+TGG | 0.348459 | 2.2:+15086266 | None:intergenic |
TCAGGAATACATCGAAGTTT+GGG | 0.349680 | 2.2:-15089124 | MS.gene059896:CDS |
TGTTGTTGATGCATTGAAAA+TGG | 0.352663 | 2.2:+15086579 | None:intergenic |
ATCGTACTCCTTTGCTGACT+TGG | 0.356774 | 2.2:+15085519 | None:intergenic |
AGAAGAAACCTTCTTGTGTT+TGG | 0.357242 | 2.2:+15090696 | None:intergenic |
TTTATATGCATGCAGTGTTC+AGG | 0.361700 | 2.2:-15089142 | MS.gene059896:CDS |
AGCAGTAGCACCAGCTGCTT+TGG | 0.362632 | 2.2:+15087306 | None:intergenic |
TTAAATAGATCCTCAATTCC+AGG | 0.367006 | 2.2:+15086824 | None:intergenic |
GTCCAAAATTGGCCGGCTAC+TGG | 0.376198 | 2.2:-15086444 | MS.gene059896:CDS |
ATGGATGACGCAAATGAAAA+TGG | 0.377068 | 2.2:-15087331 | MS.gene059896:CDS |
ATGGGCGCTACTCCAGATAT+CGG | 0.380252 | 2.2:+15086417 | None:intergenic |
GTTCGGTGGGCCAGTCTTCT+CGG | 0.391086 | 2.2:+15086874 | None:intergenic |
CTACTGCTGATGATATTAAC+TGG | 0.391223 | 2.2:-15087291 | MS.gene059896:CDS |
GTGTGCTGAGGTTGGGTAGC+AGG | 0.392677 | 2.2:+15087475 | None:intergenic |
TGCAAACATCCCTTGTGTTA+AGG | 0.401422 | 2.2:+15085489 | None:intergenic |
GTCTGTAGCATAGTCTACTT+TGG | 0.402825 | 2.2:+15087372 | None:intergenic |
TGAATGAATGCAACTTGCTC+TGG | 0.405598 | 2.2:+15088171 | None:intergenic |
CTTTCTCAGTGTGCTGAGGT+TGG | 0.413347 | 2.2:+15087467 | None:intergenic |
TCTGTTCAATATCCACCATC+TGG | 0.413856 | 2.2:-15086231 | MS.gene059896:CDS |
AACTCTCCCTGAACACCAAT+GGG | 0.414562 | 2.2:+15086399 | None:intergenic |
TTTCTCAGTGTGCTGAGGTT+GGG | 0.420180 | 2.2:+15087468 | None:intergenic |
TTCTTAAACTACCAGAGAAT+CGG | 0.422439 | 2.2:-15089403 | MS.gene059896:CDS |
TCAAATATGTAGATACTAGA+AGG | 0.430348 | 2.2:-15089428 | MS.gene059896:intron |
GTAGCAGGAACTGCATTTGA+TGG | 0.432002 | 2.2:+15087664 | None:intergenic |
CAGGAACTGCATTTGATGGT+TGG | 0.440758 | 2.2:+15087668 | None:intergenic |
ACGAGAAAGCAAATAGCTAC+TGG | 0.453079 | 2.2:-15088021 | MS.gene059896:CDS |
TCCTCGCAAGGTACCGGAGC+AGG | 0.456370 | 2.2:-15087623 | MS.gene059896:intron |
CTCGGCTGTTGCATGCTTGT+AGG | 0.458538 | 2.2:+15086480 | None:intergenic |
TCTGCACATTCCCGATTCTC+TGG | 0.459835 | 2.2:+15089392 | None:intergenic |
TCCGGTACCTTGCGAGGAGC+TGG | 0.466604 | 2.2:+15087628 | None:intergenic |
GAGTTTCCTGCCGGATATGC+TGG | 0.468216 | 2.2:+15086252 | None:intergenic |
CTTTGAGCTGTGTCGGTAGC+CGG | 0.468295 | 2.2:+15087403 | None:intergenic |
TCCAGCTCCTCGCAAGGTAC+CGG | 0.471696 | 2.2:-15087629 | MS.gene059896:CDS |
TTGGAAGTGGTTGACGTCGC+TGG | 0.483654 | 2.2:+15085538 | None:intergenic |
GTGTCAACAGCCGAGAAGAC+TGG | 0.484495 | 2.2:-15086884 | MS.gene059896:CDS |
TCTTAAACTACCAGAGAATC+GGG | 0.486903 | 2.2:-15089402 | MS.gene059896:CDS |
AAGACAAGAGATGGGTTTCA+AGG | 0.489668 | 2.2:-15087822 | MS.gene059896:CDS |
GAACATGACACCAGCATATC+CGG | 0.491572 | 2.2:-15086262 | MS.gene059896:CDS |
CTCCTTTGCTGACTTGGAAG+TGG | 0.493235 | 2.2:+15085525 | None:intergenic |
TCTGTAGCATAGTCTACTTT+GGG | 0.494497 | 2.2:+15087373 | None:intergenic |
AGAATATCAATTACCTGCTC+CGG | 0.496226 | 2.2:+15087610 | None:intergenic |
GGAGTACTCTCAACTGCGTT+CGG | 0.498592 | 2.2:+15086857 | None:intergenic |
AAAGGTATGAAGACAAGAGA+TGG | 0.503168 | 2.2:-15087831 | MS.gene059896:intron |
CAACTCTCCCTGAACACCAA+TGG | 0.510285 | 2.2:+15086398 | None:intergenic |
AGATGGGCAAGTGTAAATCT+TGG | 0.512108 | 2.2:-15089169 | MS.gene059896:CDS |
TACTTTGCAGAGCTCCGAGA+TGG | 0.514468 | 2.2:-15089186 | MS.gene059896:intron |
CCATAGACAACATGTTGAAA+AGG | 0.515436 | 2.2:+15087350 | None:intergenic |
GCTGATGATATTAACTGGGC+AGG | 0.515453 | 2.2:-15087286 | MS.gene059896:CDS |
CAGAGGCCTGCAGAAAATAG+TGG | 0.520069 | 2.2:-15087742 | MS.gene059896:CDS |
GTTCTGCAACTCTTGACACT+TGG | 0.520216 | 2.2:-15088197 | MS.gene059896:CDS |
GTAGCGCCCATTGGTGTTCA+GGG | 0.522193 | 2.2:-15086405 | MS.gene059896:CDS |
TACTCTCAACTGCGTTCGGT+GGG | 0.524609 | 2.2:+15086861 | None:intergenic |
AAGAGATGGGTTTCAAGGGA+TGG | 0.525253 | 2.2:-15087817 | MS.gene059896:CDS |
AGATTTACACTTGCCCATCT+CGG | 0.526067 | 2.2:+15089172 | None:intergenic |
ATTTGTTTCAGCTGCTGCAG+AGG | 0.531034 | 2.2:-15086906 | MS.gene059896:intron |
GCTTAACGCCAAACACAAGA+AGG | 0.532957 | 2.2:-15090704 | MS.gene059896:intron |
ACTGTCATCATACCATTGAC+TGG | 0.535539 | 2.2:+15085586 | None:intergenic |
CCTCCACATTACGATAGAGT+TGG | 0.536026 | 2.2:-15087986 | MS.gene059896:CDS |
TGATTCATACCTTCTCAAAG+AGG | 0.537549 | 2.2:+15086729 | None:intergenic |
TGGGCGCTACTCCAGATATC+GGG | 0.537904 | 2.2:+15086418 | None:intergenic |
TCTGTCTGCACCTGGAATTG+AGG | 0.538272 | 2.2:-15086834 | MS.gene059896:CDS |
TTCTATGGTATAGGGCAAGT+TGG | 0.538359 | 2.2:-15085610 | MS.gene059896:CDS |
GAAAATGGCTCCAAAGCAGC+TGG | 0.538743 | 2.2:-15087316 | MS.gene059896:CDS |
GAAGTTTCAGCTTGTTGTTG+CGG | 0.538836 | 2.2:+15087430 | None:intergenic |
GGGCAAGTTGGTCCAGTCAA+TGG | 0.539479 | 2.2:-15085598 | MS.gene059896:CDS |
CGAGAAAGCAAATAGCTACT+GGG | 0.542617 | 2.2:-15088020 | MS.gene059896:CDS |
TGTTTCTGTCCAAAATTGGC+CGG | 0.548823 | 2.2:-15086451 | MS.gene059896:CDS |
GCAGGCCTCTGCTGATGTGA+AGG | 0.549126 | 2.2:+15087754 | None:intergenic |
AGAGATGGGTTTCAAGGGAT+GGG | 0.550790 | 2.2:-15087816 | MS.gene059896:CDS |
GTAGCATAGTCTACTTTGGG+AGG | 0.551215 | 2.2:+15087376 | None:intergenic |
AGTACTCCTCTGTCTGCACC+TGG | 0.551377 | 2.2:-15086842 | MS.gene059896:CDS |
GGAACCCTACGTCTTGTAGC+AGG | 0.553870 | 2.2:+15087649 | None:intergenic |
AGACTGCTGCTGTGCTAGCA+TGG | 0.557012 | 2.2:+15086551 | None:intergenic |
GTTAAGCTCTTTGGTAACGT+TGG | 0.558035 | 2.2:+15090720 | None:intergenic |
TCAACTTTCTCAGTGTGCTG+AGG | 0.560105 | 2.2:+15087463 | None:intergenic |
AGCATAGTCTACTTTGGGAG+GGG | 0.560866 | 2.2:+15087378 | None:intergenic |
ACCTGCTCCGGTACCTTGCG+AGG | 0.564709 | 2.2:+15087622 | None:intergenic |
AGGGGTACTTTGAGCTGTGT+CGG | 0.564760 | 2.2:+15087396 | None:intergenic |
CTGTTCAATATCCACCATCT+GGG | 0.567420 | 2.2:-15086230 | MS.gene059896:intron |
CCTGCAGAAAATAGTGGACA+TGG | 0.569275 | 2.2:-15087736 | MS.gene059896:CDS |
ACAAGCTGAAACTTCAAAGC+CGG | 0.570226 | 2.2:-15087422 | MS.gene059896:CDS |
AAGGTATGAAGACAAGAGAT+GGG | 0.572848 | 2.2:-15087830 | MS.gene059896:CDS |
GTACTCTCAACTGCGTTCGG+TGG | 0.573585 | 2.2:+15086860 | None:intergenic |
ATATCTGGAGTAGCGCCCAT+TGG | 0.574958 | 2.2:-15086414 | MS.gene059896:CDS |
TAGCATAGTCTACTTTGGGA+GGG | 0.578912 | 2.2:+15087377 | None:intergenic |
GCTGCTGCAGCTAAATCTAC+CGG | 0.584640 | 2.2:-15086519 | MS.gene059896:CDS |
TGGACAGAAACATTGGGACT+CGG | 0.586094 | 2.2:+15086462 | None:intergenic |
AGAGTTGCAGAATCATATGC+AGG | 0.588172 | 2.2:-15086382 | MS.gene059896:intron |
ACAGCAGCAGTCTCTTCTGA+TGG | 0.591192 | 2.2:-15086541 | MS.gene059896:CDS |
GTCAATGGTATGATGACAGT+GGG | 0.591988 | 2.2:-15085583 | MS.gene059896:CDS |
TATTGAACAGAGTTTCCTGC+CGG | 0.593808 | 2.2:+15086243 | None:intergenic |
ACTTTGCAGAGCTCCGAGAT+GGG | 0.594386 | 2.2:-15089185 | MS.gene059896:intron |
CCTGAAGCAATCACCATGAA+CGG | 0.594840 | 2.2:-15090748 | None:intergenic |
AGACAAGAGATGGGTTTCAA+GGG | 0.594902 | 2.2:-15087821 | MS.gene059896:CDS |
CAGGAATACATCGAAGTTTG+GGG | 0.597859 | 2.2:-15089123 | MS.gene059896:CDS |
TTATCTTCACGCAGTCCAGA+AGG | 0.598442 | 2.2:+15087781 | None:intergenic |
AACCACTTCCAAGTCAGCAA+AGG | 0.599759 | 2.2:-15085527 | MS.gene059896:CDS |
TATAATGAGCCTCTTTGAGA+AGG | 0.605527 | 2.2:-15086738 | MS.gene059896:intron |
AGCAATCACCATGAACGGAA+AGG | 0.610926 | 2.2:-15090743 | None:intergenic |
GATATCGGGAATCCAGTAGC+CGG | 0.612970 | 2.2:+15086432 | None:intergenic |
TAGGGTTCCAGCTCCTCGCA+AGG | 0.614792 | 2.2:-15087635 | MS.gene059896:CDS |
ATGACACCAGCATATCCGGC+AGG | 0.615567 | 2.2:-15086258 | MS.gene059896:CDS |
GACGTCGCTGGAGTTGACTG+AGG | 0.620712 | 2.2:+15085550 | None:intergenic |
AGTTCCTGCTACAAGACGTA+GGG | 0.629500 | 2.2:-15087653 | MS.gene059896:CDS |
TACTGCTGATGATATTAACT+GGG | 0.634184 | 2.2:-15087290 | MS.gene059896:CDS |
AGTCCAACTCTATCGTAATG+TGG | 0.641617 | 2.2:+15087983 | None:intergenic |
CTAGTGACATACCCAGATGG+TGG | 0.645472 | 2.2:+15086219 | None:intergenic |
CAGTTCCTGCTACAAGACGT+AGG | 0.647490 | 2.2:-15087654 | MS.gene059896:CDS |
AGTTTCAGCTTGTTGTTGCG+GGG | 0.650076 | 2.2:+15087432 | None:intergenic |
TCAATTCCAGGTGCAGACAG+AGG | 0.665056 | 2.2:+15086836 | None:intergenic |
AATCTCCTTCACATCAGCAG+AGG | 0.669955 | 2.2:-15087759 | MS.gene059896:CDS |
AAAAGTATTCTCAGCAACAG+TGG | 0.676236 | 2.2:+15087708 | None:intergenic |
AGTCAATGGTATGATGACAG+TGG | 0.678318 | 2.2:-15085584 | MS.gene059896:CDS |
TGCAGCTAAATCTACCGGTG+TGG | 0.679609 | 2.2:-15086514 | MS.gene059896:CDS |
TAACTAGTGACATACCCAGA+TGG | 0.685152 | 2.2:+15086216 | None:intergenic |
CCAACTCTATCGTAATGTGG+AGG | 0.685175 | 2.2:+15087986 | None:intergenic |
AGGATACTTGAGATCCACAC+CGG | 0.731794 | 2.2:+15086500 | None:intergenic |
AGGAATACATCGAAGTTTGG+GGG | 0.738285 | 2.2:-15089122 | MS.gene059896:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATAATAATAAATAATCC+TGG | + | chr2.2:15086975-15086994 | None:intergenic | 10.0% |
!!! | ATAAATTCTTTTATTCTTAT+TGG | - | chr2.2:15089586-15089605 | MS.gene059896:intron | 10.0% |
!!! | TATTTTTTTAATATTTCGTT+TGG | - | chr2.2:15087562-15087581 | MS.gene059896:intron | 10.0% |
!! | AAAAGGAAAAATAAATTCTA+TGG | - | chr2.2:15088982-15089001 | MS.gene059896:intron | 15.0% |
!! | CAATTAAAAAAATCATGTAT+CGG | - | chr2.2:15087842-15087861 | MS.gene059896:intron | 15.0% |
!! | TATGTAAAATTAAATCCTAT+GGG | - | chr2.2:15085992-15086011 | MS.gene059896:intron | 15.0% |
!! | TCATTAAAAATCTAGATTAA+AGG | + | chr2.2:15090259-15090278 | None:intergenic | 15.0% |
!! | TCTTAAAAGTTATTCATATT+TGG | - | chr2.2:15086522-15086541 | MS.gene059896:CDS | 15.0% |
!!! | AAATGTTTTCTTAAAGTAAA+CGG | - | chr2.2:15089257-15089276 | MS.gene059896:intron | 15.0% |
!!! | ATTAATCAATTAGGATATTT+TGG | - | chr2.2:15085747-15085766 | MS.gene059896:intron | 15.0% |
!!! | ATTTAGCATCAAAATTTTAA+GGG | + | chr2.2:15087209-15087228 | None:intergenic | 15.0% |
!!! | TATTGAACAATTTTGTTTTT+AGG | - | chr2.2:15086705-15086724 | MS.gene059896:intron | 15.0% |
!!! | TATTTAGCATCAAAATTTTA+AGG | + | chr2.2:15087210-15087229 | None:intergenic | 15.0% |
!!! | TATTTTAGAATTTCTTGTTT+TGG | - | chr2.2:15088150-15088169 | MS.gene059896:intron | 15.0% |
!!! | TTTATTTTGTTTTTGTAACA+AGG | - | chr2.2:15088630-15088649 | MS.gene059896:intron | 15.0% |
!!! | TTTTTCCTTTTTCTTTTTTA+AGG | + | chr2.2:15088973-15088992 | None:intergenic | 15.0% |
!! | AATAATGTGTCTAGTTAAAT+GGG | - | chr2.2:15087406-15087425 | MS.gene059896:CDS | 20.0% |
!! | AATGTAATTACTTTACTTTC+AGG | - | chr2.2:15087990-15088009 | MS.gene059896:CDS | 20.0% |
!! | ATAGTAAAAATTTCACAAGT+GGG | - | chr2.2:15087245-15087264 | MS.gene059896:intron | 20.0% |
!! | ATTACATTAGTATACAATGA+AGG | + | chr2.2:15087978-15087997 | None:intergenic | 20.0% |
!! | ATTCTCTACACTTAATAATT+TGG | - | chr2.2:15087432-15087451 | MS.gene059896:CDS | 20.0% |
!! | CAATTATTGCATATACTTAA+AGG | - | chr2.2:15088364-15088383 | MS.gene059896:intron | 20.0% |
!! | GTATGTAAAATTAAATCCTA+TGG | - | chr2.2:15085991-15086010 | MS.gene059896:intron | 20.0% |
!! | GTTTGAGTAATTGTAAATTT+GGG | - | chr2.2:15086341-15086360 | MS.gene059896:intron | 20.0% |
!! | TATAGTAAAAATTTCACAAG+TGG | - | chr2.2:15087244-15087263 | MS.gene059896:intron | 20.0% |
!! | TATATGCAATAATTGAAATC+AGG | + | chr2.2:15088359-15088378 | None:intergenic | 20.0% |
!! | TATGTCCTTAAAAAAGAAAA+AGG | - | chr2.2:15088965-15088984 | MS.gene059896:intron | 20.0% |
!! | TGTTTGAGTAATTGTAAATT+TGG | - | chr2.2:15086340-15086359 | MS.gene059896:intron | 20.0% |
!! | TTAAAAATCTAGATTAAAGG+AGG | + | chr2.2:15090256-15090275 | None:intergenic | 20.0% |
!! | TTAGTTTATTCTTTCTTAGT+TGG | - | chr2.2:15085688-15085707 | MS.gene059896:intron | 20.0% |
!!! | ATTGTAAATTTGGGATATTA+AGG | - | chr2.2:15086350-15086369 | MS.gene059896:intron | 20.0% |
!!! | CCAAATTTAAAGTACAAAAA+GGG | + | chr2.2:15088665-15088684 | None:intergenic | 20.0% |
!!! | CTATAGAAATCTTTGAAAAT+AGG | - | chr2.2:15089173-15089192 | MS.gene059896:CDS | 20.0% |
!!! | CTATTTTCAAAGATTTCTAT+AGG | + | chr2.2:15089175-15089194 | None:intergenic | 20.0% |
!!! | GAAATATTCATTTTGTAAAC+AGG | - | chr2.2:15088710-15088729 | MS.gene059896:intron | 20.0% |
!!! | GTGTCTAGTTTTTTTTTTTA+GGG | - | chr2.2:15087382-15087401 | MS.gene059896:CDS | 20.0% |
!!! | TATCATTTTCCTTATTTAAC+AGG | - | chr2.2:15087531-15087550 | MS.gene059896:intron | 20.0% |
!!! | TCCAAATTTAAAGTACAAAA+AGG | + | chr2.2:15088666-15088685 | None:intergenic | 20.0% |
!!! | TCTATTTTTGACAAACATAA+TGG | + | chr2.2:15090232-15090251 | None:intergenic | 20.0% |
!!! | TGAATGATTATTTAGCTTTT+GGG | - | chr2.2:15086143-15086162 | MS.gene059896:intron | 20.0% |
!!! | TGTCTAGTTTTTTTTTTTAG+GGG | - | chr2.2:15087383-15087402 | MS.gene059896:CDS | 20.0% |
!!! | TGTGTCTAGTTTTTTTTTTT+AGG | - | chr2.2:15087381-15087400 | MS.gene059896:CDS | 20.0% |
!!! | TGTTTTATTGATATTTTGAG+TGG | - | chr2.2:15086476-15086495 | MS.gene059896:CDS | 20.0% |
!!! | TGTTTTCATTTTCAAATGTA+CGG | - | chr2.2:15089113-15089132 | MS.gene059896:CDS | 20.0% |
! | ATTATCGAAGAAGAATGAAA+AGG | + | chr2.2:15085551-15085570 | None:intergenic | 25.0% |
! | ATTGTAGTTCTTATGTTGAA+AGG | + | chr2.2:15086667-15086686 | None:intergenic | 25.0% |
! | CAAGCAAATAGATACAAAAT+TGG | - | chr2.2:15086913-15086932 | MS.gene059896:intron | 25.0% |
! | CTACACTTAATAATTTGGAT+AGG | - | chr2.2:15087437-15087456 | MS.gene059896:CDS | 25.0% |
! | CTCATAACATCTTGAAAATA+AGG | + | chr2.2:15086187-15086206 | None:intergenic | 25.0% |
! | GAATAATGTGTCTAGTTAAA+TGG | - | chr2.2:15087405-15087424 | MS.gene059896:CDS | 25.0% |
! | TACTCAAACAAACAACTAAA+TGG | + | chr2.2:15086330-15086349 | None:intergenic | 25.0% |
! | TCAAATATGTAGATACTAGA+AGG | - | chr2.2:15086785-15086804 | MS.gene059896:CDS | 25.0% |
! | TCTTATGTTGAAAGGATTTA+AGG | + | chr2.2:15086659-15086678 | None:intergenic | 25.0% |
! | TGATAGAAACAAGAAATAGA+TGG | - | chr2.2:15087496-15087515 | MS.gene059896:intron | 25.0% |
! | TTATCGAAGAAGAATGAAAA+GGG | + | chr2.2:15085550-15085569 | None:intergenic | 25.0% |
! | TTGTATAATATGGTGATTTG+TGG | - | chr2.2:15087271-15087290 | MS.gene059896:intron | 25.0% |
! | TTTATTCTTTCTTAGTTGGT+AGG | - | chr2.2:15085692-15085711 | MS.gene059896:intron | 25.0% |
! | TTTGTTCGGATTAATCAATT+AGG | - | chr2.2:15085738-15085757 | MS.gene059896:intron | 25.0% |
!! | AAAAATCGAAATGATGATGA+TGG | + | chr2.2:15085616-15085635 | None:intergenic | 25.0% |
!! | ATTTTTCTTCCTTAACACAA+GGG | - | chr2.2:15090715-15090734 | MS.gene059896:CDS | 25.0% |
!! | CAATAACACATAATGTTTTG+TGG | - | chr2.2:15087308-15087327 | MS.gene059896:CDS | 25.0% |
!! | CCCTTTTTGTACTTTAAATT+TGG | - | chr2.2:15088662-15088681 | MS.gene059896:intron | 25.0% |
!! | TCACTATAAAACCAACATTT+TGG | + | chr2.2:15087915-15087934 | None:intergenic | 25.0% |
!! | TTAAGATATTTGTTACTGCA+AGG | + | chr2.2:15086598-15086617 | None:intergenic | 25.0% |
!!! | AAAAACGGTTTAGAATTTTC+TGG | + | chr2.2:15086300-15086319 | None:intergenic | 25.0% |
!!! | ATATATGTTGATGACAAGAA+AGG | - | chr2.2:15086415-15086434 | MS.gene059896:CDS | 25.0% |
!!! | ATTGATATTTTGAGTGGAAA+AGG | - | chr2.2:15086482-15086501 | MS.gene059896:CDS | 25.0% |
!!! | CTATTTCTTGTTTCTATCAA+GGG | + | chr2.2:15087495-15087514 | None:intergenic | 25.0% |
!!! | GTGAATGATTATTTAGCTTT+TGG | - | chr2.2:15086142-15086161 | MS.gene059896:intron | 25.0% |
!!! | TCATTTTTAACATCTTTCTG+TGG | + | chr2.2:15089455-15089474 | None:intergenic | 25.0% |
!!! | TCTATTTCTTGTTTCTATCA+AGG | + | chr2.2:15087496-15087515 | None:intergenic | 25.0% |
AAACCTCCAAAAAGGAAATA+TGG | + | chr2.2:15086100-15086119 | None:intergenic | 30.0% | |
AAAGGAAATATGGGAAACTA+AGG | + | chr2.2:15086090-15086109 | None:intergenic | 30.0% | |
AACCTCCAAAAAGGAAATAT+GGG | + | chr2.2:15086099-15086118 | None:intergenic | 30.0% | |
AACTAGTATATCTTTCCCAT+AGG | + | chr2.2:15086010-15086029 | None:intergenic | 30.0% | |
AAGCTAAGTATGTATTTGTC+TGG | - | chr2.2:15086849-15086868 | MS.gene059896:CDS | 30.0% | |
AAGGAAATATGGGAAACTAA+GGG | + | chr2.2:15086089-15086108 | None:intergenic | 30.0% | |
AAGTGGGCAATTGTATAATA+TGG | - | chr2.2:15087261-15087280 | MS.gene059896:intron | 30.0% | |
ATAGTGTGAAATATCAGTAG+TGG | - | chr2.2:15087170-15087189 | MS.gene059896:intron | 30.0% | |
ATGCAATGCATTCATTGATA+GGG | - | chr2.2:15085910-15085929 | MS.gene059896:intron | 30.0% | |
CAAAAGTCATTGGAACTTAT+AGG | + | chr2.2:15087950-15087969 | None:intergenic | 30.0% | |
CAGTGCAAAAATTCTTCATA+TGG | - | chr2.2:15085832-15085851 | MS.gene059896:intron | 30.0% | |
GTATGAATCAATGCTTCAAT+AGG | - | chr2.2:15089497-15089516 | MS.gene059896:intron | 30.0% | |
TAAAAATGTGCATCATGAAG+TGG | - | chr2.2:15085933-15085952 | MS.gene059896:intron | 30.0% | |
TACTGCTGATGATATTAACT+GGG | - | chr2.2:15088923-15088942 | MS.gene059896:intron | 30.0% | |
TATCGAAGAAGAATGAAAAG+GGG | + | chr2.2:15085549-15085568 | None:intergenic | 30.0% | |
TATGCAATGCATTCATTGAT+AGG | - | chr2.2:15085909-15085928 | MS.gene059896:intron | 30.0% | |
TGCAATAGATTAGATGTAGA+AGG | + | chr2.2:15090522-15090541 | None:intergenic | 30.0% | |
TGTTGTTGATGCATTGAAAA+TGG | + | chr2.2:15089637-15089656 | None:intergenic | 30.0% | |
TTAAATAGATCCTCAATTCC+AGG | + | chr2.2:15089392-15089411 | None:intergenic | 30.0% | |
TTCTTAAACTACCAGAGAAT+CGG | - | chr2.2:15086810-15086829 | MS.gene059896:CDS | 30.0% | |
TTTCACATGCCAAAACAAAT+GGG | - | chr2.2:15090147-15090166 | MS.gene059896:intron | 30.0% | |
! | AAAACCAACATTTTGGACTT+AGG | + | chr2.2:15087908-15087927 | None:intergenic | 30.0% |
! | AGCTGATTTCCTGTTAAATA+AGG | + | chr2.2:15087543-15087562 | None:intergenic | 30.0% |
! | AGTTTCCCATATTTCCTTTT+TGG | - | chr2.2:15086091-15086110 | MS.gene059896:intron | 30.0% |
! | CAAAATTGGTTCTTGAAATG+TGG | - | chr2.2:15086927-15086946 | MS.gene059896:intron | 30.0% |
! | CAATTTTGGACAGAAACATT+GGG | + | chr2.2:15089760-15089779 | None:intergenic | 30.0% |
! | GAAGATGGATTCAGTTTAAT+TGG | - | chr2.2:15086557-15086576 | MS.gene059896:CDS | 30.0% |
! | GATTTTTCTTCCTTAACACA+AGG | - | chr2.2:15090714-15090733 | MS.gene059896:CDS | 30.0% |
! | GTAAATTTGGGATATTAAGG+AGG | - | chr2.2:15086353-15086372 | MS.gene059896:intron | 30.0% |
! | TAGTAGTGTAAGACATTTTC+TGG | + | chr2.2:15090442-15090461 | None:intergenic | 30.0% |
!! | AAGTCATGGATTAGTCATTT+GGG | - | chr2.2:15086245-15086264 | MS.gene059896:CDS | 30.0% |
!! | AATACTTTTCTAGTGATGCA+TGG | - | chr2.2:15085774-15085793 | MS.gene059896:intron | 30.0% |
!! | CTGAGAATACTTTTGAAGAA+AGG | - | chr2.2:15088514-15088533 | MS.gene059896:intron | 30.0% |
!! | GATTTTGTTGTGAAGAACTT+GGG | - | chr2.2:15089064-15089083 | MS.gene059896:intron | 30.0% |
!! | TAAGTCATGGATTAGTCATT+TGG | - | chr2.2:15086244-15086263 | MS.gene059896:CDS | 30.0% |
!! | TGATTTTGTTGTGAAGAACT+TGG | - | chr2.2:15089063-15089082 | MS.gene059896:intron | 30.0% |
!! | TGTTACTCGACATTTTGTTT+TGG | - | chr2.2:15089019-15089038 | MS.gene059896:intron | 30.0% |
!!! | TTTTGGTTCTATTCAGCAAT+GGG | - | chr2.2:15088167-15088186 | MS.gene059896:intron | 30.0% |
AAATGTACGGAATATTGTGC+AGG | - | chr2.2:15089126-15089145 | MS.gene059896:CDS | 35.0% | |
AACGTATTCTCAAAGCAAAC+AGG | + | chr2.2:15089090-15089109 | None:intergenic | 35.0% | |
AACTGAATCCATCTTCATGT+AGG | + | chr2.2:15086553-15086572 | None:intergenic | 35.0% | |
AAGGTATGAAGACAAGAGAT+GGG | - | chr2.2:15088383-15088402 | MS.gene059896:intron | 35.0% | |
ACCATAGAAACTGCAACAAA+TGG | + | chr2.2:15090592-15090611 | None:intergenic | 35.0% | |
ACTGAATCCATCTTCATGTA+GGG | + | chr2.2:15086552-15086571 | None:intergenic | 35.0% | |
ACTTATAAACCTCACGAGTT+AGG | + | chr2.2:15086229-15086248 | None:intergenic | 35.0% | |
ACTTTGCCGACAAAAAGTTA+TGG | + | chr2.2:15087797-15087816 | None:intergenic | 35.0% | |
AGAAAGGAAAAAACATTGCG+AGG | - | chr2.2:15086431-15086450 | MS.gene059896:CDS | 35.0% | |
AGAAGAAACCTTCTTGTGTT+TGG | + | chr2.2:15085520-15085539 | None:intergenic | 35.0% | |
AGAATATCAATTACCTGCTC+CGG | + | chr2.2:15088606-15088625 | None:intergenic | 35.0% | |
ATGGATGACGCAAATGAAAA+TGG | - | chr2.2:15088882-15088901 | MS.gene059896:intron | 35.0% | |
ATGTATTTGTCTGGATCTGA+AGG | - | chr2.2:15086858-15086877 | MS.gene059896:CDS | 35.0% | |
CCATAATCTGCTAAACTAGT+GGG | + | chr2.2:15090395-15090414 | None:intergenic | 35.0% | |
CCATAGACAACATGTTGAAA+AGG | + | chr2.2:15088866-15088885 | None:intergenic | 35.0% | |
CCTGGAAATGAAAAACACAA+AGG | + | chr2.2:15086957-15086976 | None:intergenic | 35.0% | |
CTACTGCTGATGATATTAAC+TGG | - | chr2.2:15088922-15088941 | MS.gene059896:intron | 35.0% | |
CTATGGTGTTTCACTTTGTT+CGG | - | chr2.2:15085724-15085743 | MS.gene059896:intron | 35.0% | |
CTTTAACTCTGATGAGTACT+AGG | - | chr2.2:15087762-15087781 | MS.gene059896:CDS | 35.0% | |
GAAGGAAAGACAAAAGTCAT+TGG | + | chr2.2:15087960-15087979 | None:intergenic | 35.0% | |
GTTGCAGTTTCTATGGTATA+GGG | - | chr2.2:15090595-15090614 | MS.gene059896:intron | 35.0% | |
GTTTAACACAGACATCAAGA+TGG | + | chr2.2:15090563-15090582 | None:intergenic | 35.0% | |
GTTTCACATGCCAAAACAAA+TGG | - | chr2.2:15090146-15090165 | MS.gene059896:intron | 35.0% | |
TACCCAATGTGACATTAAGT+CGG | + | chr2.2:15090035-15090054 | None:intergenic | 35.0% | |
TATGCTGATGTTTATGTGCT+CGG | - | chr2.2:15087337-15087356 | MS.gene059896:CDS | 35.0% | |
TCAGGAATACATCGAAGTTT+GGG | - | chr2.2:15087089-15087108 | MS.gene059896:intron | 35.0% | |
TCCATAATCTGCTAAACTAG+TGG | + | chr2.2:15090396-15090415 | None:intergenic | 35.0% | |
TCTGTAGCATAGTCTACTTT+GGG | + | chr2.2:15088843-15088862 | None:intergenic | 35.0% | |
TCTTAAACTACCAGAGAATC+GGG | - | chr2.2:15086811-15086830 | MS.gene059896:CDS | 35.0% | |
TGATTCATACCTTCTCAAAG+AGG | + | chr2.2:15089487-15089506 | None:intergenic | 35.0% | |
TGTATTTGTCTGGATCTGAA+GGG | - | chr2.2:15086859-15086878 | MS.gene059896:CDS | 35.0% | |
TGTTGCAGTTTCTATGGTAT+AGG | - | chr2.2:15090594-15090613 | MS.gene059896:intron | 35.0% | |
TTCAGGAATACATCGAAGTT+TGG | - | chr2.2:15087088-15087107 | MS.gene059896:intron | 35.0% | |
TTTATATGCATGCAGTGTTC+AGG | - | chr2.2:15087071-15087090 | MS.gene059896:intron | 35.0% | |
TTTATTGCTGACATGAGATC+CGG | + | chr2.2:15086892-15086911 | None:intergenic | 35.0% | |
! | AAAGGTATGAAGACAAGAGA+TGG | - | chr2.2:15088382-15088401 | MS.gene059896:intron | 35.0% |
! | CAAGTAACTCCCATTTGTTT+TGG | + | chr2.2:15090159-15090178 | None:intergenic | 35.0% |
! | CACTGTTGTATTTTCCAACT+AGG | + | chr2.2:15087607-15087626 | None:intergenic | 35.0% |
! | CCTTTGTGTTTTTCATTTCC+AGG | - | chr2.2:15086954-15086973 | MS.gene059896:intron | 35.0% |
! | CCTTTTCAACATGTTGTCTA+TGG | - | chr2.2:15088863-15088882 | MS.gene059896:intron | 35.0% |
! | CTTAAAGTAAACGGACTCTA+AGG | - | chr2.2:15089266-15089285 | MS.gene059896:intron | 35.0% |
! | GACATTCGCATGTAAACTTT+TGG | - | chr2.2:15087679-15087698 | MS.gene059896:CDS | 35.0% |
! | GGTTTTACTGGAGTTAAACT+TGG | + | chr2.2:15089434-15089453 | None:intergenic | 35.0% |
! | GTTGTATTTTCCAACTAGGT+GGG | + | chr2.2:15087603-15087622 | None:intergenic | 35.0% |
! | TAGTGTAAGACATTTTCTGG+TGG | + | chr2.2:15090439-15090458 | None:intergenic | 35.0% |
! | TATAATGAGCCTCTTTGAGA+AGG | - | chr2.2:15089475-15089494 | MS.gene059896:intron | 35.0% |
! | TCCATTTGTTGCAGTTTCTA+TGG | - | chr2.2:15090588-15090607 | MS.gene059896:intron | 35.0% |
! | TGTTGTATTTTCCAACTAGG+TGG | + | chr2.2:15087604-15087623 | None:intergenic | 35.0% |
! | TTCAATGTAAGTGAGTTGAG+TGG | - | chr2.2:15088061-15088080 | MS.gene059896:intron | 35.0% |
! | TTCCCATATTTCCTTTTTGG+AGG | - | chr2.2:15086094-15086113 | MS.gene059896:intron | 35.0% |
! | TTGTATTTTCCAACTAGGTG+GGG | + | chr2.2:15087602-15087621 | None:intergenic | 35.0% |
! | TTTAGGATTTGCCACATCTT+CGG | - | chr2.2:15086722-15086741 | MS.gene059896:intron | 35.0% |
! | TTTGGGGGTACATATATCAA+AGG | - | chr2.2:15087106-15087125 | MS.gene059896:intron | 35.0% |
!! | AAAAGTATTCTCAGCAACAG+TGG | + | chr2.2:15088508-15088527 | None:intergenic | 35.0% |
!! | AATTCTAAACCGTTTTTCCC+AGG | - | chr2.2:15086303-15086322 | MS.gene059896:intron | 35.0% |
!! | ACATCTTTCTGTGGTTTTAC+TGG | + | chr2.2:15089446-15089465 | None:intergenic | 35.0% |
!! | ATTCTAAACCGTTTTTCCCA+GGG | - | chr2.2:15086304-15086323 | MS.gene059896:intron | 35.0% |
!! | TTGGTAGGTTGATTGATCTA+TGG | - | chr2.2:15085707-15085726 | MS.gene059896:intron | 35.0% |
!!! | GTTTTGGTTCTATTCAGCAA+TGG | - | chr2.2:15088166-15088185 | MS.gene059896:intron | 35.0% |
AACAAACAACTAAATGGCCC+TGG | + | chr2.2:15086324-15086343 | None:intergenic | 40.0% | |
AACACAGACATCAAGATGGA+AGG | + | chr2.2:15090559-15090578 | None:intergenic | 40.0% | |
ACAAACAACTAAATGGCCCT+GGG | + | chr2.2:15086323-15086342 | None:intergenic | 40.0% | |
ACAAGCTGAAACTTCAAAGC+CGG | - | chr2.2:15088791-15088810 | MS.gene059896:intron | 40.0% | |
ACATAAGTTAGTTGCTGGAC+TGG | + | chr2.2:15089908-15089927 | None:intergenic | 40.0% | |
ACGAGAAAGCAAATAGCTAC+TGG | - | chr2.2:15088192-15088211 | MS.gene059896:CDS | 40.0% | |
ACGCTGAAAAACCTCCAAAA+AGG | + | chr2.2:15086108-15086127 | None:intergenic | 40.0% | |
ACGTGAGAATTGCTGAAGTA+TGG | - | chr2.2:15087880-15087899 | MS.gene059896:intron | 40.0% | |
ACTGTCATCATACCATTGAC+TGG | + | chr2.2:15090630-15090649 | None:intergenic | 40.0% | |
AGAGTTGCAGAATCATATGC+AGG | - | chr2.2:15089831-15089850 | MS.gene059896:intron | 40.0% | |
AGATGGGCAAGTGTAAATCT+TGG | - | chr2.2:15087044-15087063 | MS.gene059896:intron | 40.0% | |
AGATTTACACTTGCCCATCT+CGG | + | chr2.2:15087044-15087063 | None:intergenic | 40.0% | |
AGGAATACATCGAAGTTTGG+GGG | - | chr2.2:15087091-15087110 | MS.gene059896:intron | 40.0% | |
AGTCAATGGTATGATGACAG+TGG | - | chr2.2:15090629-15090648 | MS.gene059896:intron | 40.0% | |
AGTCCAACTCTATCGTAATG+TGG | + | chr2.2:15088233-15088252 | None:intergenic | 40.0% | |
ATCAATCCCTTCAGCCATAA+CGG | + | chr2.2:15086386-15086405 | None:intergenic | 40.0% | |
ATGGAATTCAGAGTAACCCT+CGG | - | chr2.2:15090100-15090119 | MS.gene059896:intron | 40.0% | |
ATGGAGCAAATGACAATAGC+AGG | + | chr2.2:15090082-15090101 | None:intergenic | 40.0% | |
ATGTTATGAGTCCACCTTCA+AGG | - | chr2.2:15086197-15086216 | MS.gene059896:intron | 40.0% | |
CAGGAATACATCGAAGTTTG+GGG | - | chr2.2:15087090-15087109 | MS.gene059896:intron | 40.0% | |
CGAGAAAGCAAATAGCTACT+GGG | - | chr2.2:15088193-15088212 | MS.gene059896:CDS | 40.0% | |
CTCGTGAGGTTTATAAGTCA+TGG | - | chr2.2:15086231-15086250 | MS.gene059896:CDS | 40.0% | |
CTGTTCAATATCCACCATCT+GGG | - | chr2.2:15089983-15090002 | MS.gene059896:intron | 40.0% | |
GCAAGACATAAGTTAGTTGC+TGG | + | chr2.2:15089913-15089932 | None:intergenic | 40.0% | |
GCATCATGAAGTGGTTTGAT+TGG | - | chr2.2:15085942-15085961 | MS.gene059896:intron | 40.0% | |
GTAAACTGCATAAACACTGC+CGG | + | chr2.2:15087743-15087762 | None:intergenic | 40.0% | |
GTATTTGTCTGGATCTGAAG+GGG | - | chr2.2:15086860-15086879 | MS.gene059896:CDS | 40.0% | |
GTCAATGGTATGATGACAGT+GGG | - | chr2.2:15090630-15090649 | MS.gene059896:intron | 40.0% | |
GTCACATTGGGTAGCTTATT+GGG | - | chr2.2:15090042-15090061 | MS.gene059896:intron | 40.0% | |
GTCTGTAGCATAGTCTACTT+TGG | + | chr2.2:15088844-15088863 | None:intergenic | 40.0% | |
TAACTAGTGACATACCCAGA+TGG | + | chr2.2:15090000-15090019 | None:intergenic | 40.0% | |
TAACTTATGTCTTGCCTCTC+TGG | - | chr2.2:15089918-15089937 | MS.gene059896:intron | 40.0% | |
TATTGAACAGAGTTTCCTGC+CGG | + | chr2.2:15089973-15089992 | None:intergenic | 40.0% | |
TCTGTTCAATATCCACCATC+TGG | - | chr2.2:15089982-15090001 | MS.gene059896:intron | 40.0% | |
TGCAAACATCCCTTGTGTTA+AGG | + | chr2.2:15090727-15090746 | None:intergenic | 40.0% | |
TGTCACATTGGGTAGCTTAT+TGG | - | chr2.2:15090041-15090060 | MS.gene059896:intron | 40.0% | |
TGTTATGAGTCCACCTTCAA+GGG | - | chr2.2:15086198-15086217 | MS.gene059896:intron | 40.0% | |
TTCAGCGTTATTTGGATGCT+CGG | - | chr2.2:15086120-15086139 | MS.gene059896:intron | 40.0% | |
TTCTATGGTATAGGGCAAGT+TGG | - | chr2.2:15090603-15090622 | MS.gene059896:intron | 40.0% | |
! | AAGACAAGAGATGGGTTTCA+AGG | - | chr2.2:15088391-15088410 | MS.gene059896:intron | 40.0% |
! | AAGCCGACTTAATGTCACAT+TGG | - | chr2.2:15090029-15090048 | MS.gene059896:intron | 40.0% |
! | AGACAAGAGATGGGTTTCAA+GGG | - | chr2.2:15088392-15088411 | MS.gene059896:intron | 40.0% |
! | AGCCGACTTAATGTCACATT+GGG | - | chr2.2:15090030-15090049 | MS.gene059896:intron | 40.0% |
! | ATATCAGTAGTGGAGACTCT+TGG | - | chr2.2:15087180-15087199 | MS.gene059896:intron | 40.0% |
! | CCCACTAGTTTAGCAGATTA+TGG | - | chr2.2:15090392-15090411 | MS.gene059896:intron | 40.0% |
! | GCTGCACCATAACTTTTTGT+CGG | - | chr2.2:15087788-15087807 | MS.gene059896:CDS | 40.0% |
! | TAGCATAGTCTACTTTGGGA+GGG | + | chr2.2:15088839-15088858 | None:intergenic | 40.0% |
! | TATCAGTAGTGGAGACTCTT+GGG | - | chr2.2:15087181-15087200 | MS.gene059896:intron | 40.0% |
! | TCGTACCACAAGACTACTTT+TGG | - | chr2.2:15090186-15090205 | MS.gene059896:intron | 40.0% |
! | TGAATGAATGCAACTTGCTC+TGG | + | chr2.2:15088045-15088064 | None:intergenic | 40.0% |
! | TGCTATTGTCATTTGCTCCA+TGG | - | chr2.2:15090081-15090100 | MS.gene059896:intron | 40.0% |
! | TGGTTTTCCCTACATGAAGA+TGG | - | chr2.2:15086542-15086561 | MS.gene059896:CDS | 40.0% |
!! | AAGTTTCAGCTTGTTGTTGC+GGG | + | chr2.2:15088785-15088804 | None:intergenic | 40.0% |
!! | AGACATTTTCTGGTGGTTTG+TGG | + | chr2.2:15090432-15090451 | None:intergenic | 40.0% |
!! | CATGGATTAGTCATTTGGGA+TGG | - | chr2.2:15086249-15086268 | MS.gene059896:CDS | 40.0% |
!! | CGTACCACAAGACTACTTTT+GGG | - | chr2.2:15090187-15090206 | MS.gene059896:intron | 40.0% |
!! | GAAGTTTCAGCTTGTTGTTG+CGG | + | chr2.2:15088786-15088805 | None:intergenic | 40.0% |
!! | GGAGGTTTTTCAGCGTTATT+TGG | - | chr2.2:15086112-15086131 | MS.gene059896:intron | 40.0% |
!! | GTACCACAAGACTACTTTTG+GGG | - | chr2.2:15090188-15090207 | MS.gene059896:intron | 40.0% |
!! | GTCGGCAAAGTTTTTCAATG+TGG | - | chr2.2:15087806-15087825 | MS.gene059896:CDS | 40.0% |
!! | GTTAAGCTCTTTGGTAACGT+TGG | + | chr2.2:15085496-15085515 | None:intergenic | 40.0% |
!! | TACCACAAGACTACTTTTGG+GGG | - | chr2.2:15090189-15090208 | MS.gene059896:intron | 40.0% |
!! | TGGTCGTGTTCTTGTTATTG+TGG | - | chr2.2:15088081-15088100 | MS.gene059896:intron | 40.0% |
AAAGACGTAAGCCGAAGAGA+AGG | + | chr2.2:15086752-15086771 | None:intergenic | 45.0% | |
AACCACTTCCAAGTCAGCAA+AGG | - | chr2.2:15090686-15090705 | MS.gene059896:intron | 45.0% | |
AACTCTCCCTGAACACCAAT+GGG | + | chr2.2:15089817-15089836 | None:intergenic | 45.0% | |
AACTCTGATGAGTACTAGGC+TGG | - | chr2.2:15087766-15087785 | MS.gene059896:CDS | 45.0% | |
AAGACGTAAGCCGAAGAGAA+GGG | + | chr2.2:15086751-15086770 | None:intergenic | 45.0% | |
AATCAGGTGCAGAAAGCAAG+AGG | + | chr2.2:15088343-15088362 | None:intergenic | 45.0% | |
AATCTCCTTCACATCAGCAG+AGG | - | chr2.2:15088454-15088473 | MS.gene059896:intron | 45.0% | |
ACTTGTTCCGTTATGGCTGA+AGG | - | chr2.2:15086376-15086395 | MS.gene059896:intron | 45.0% | |
AGGATACTTGAGATCCACAC+CGG | + | chr2.2:15089716-15089735 | None:intergenic | 45.0% | |
AGTTCCTGCTACAAGACGTA+GGG | - | chr2.2:15088560-15088579 | MS.gene059896:intron | 45.0% | |
ATGACAGACATTCCAGACCA+AGG | + | chr2.2:15087152-15087171 | None:intergenic | 45.0% | |
ATTAGCAAACCCCACCTAGT+TGG | - | chr2.2:15087590-15087609 | MS.gene059896:intron | 45.0% | |
ATTAGCACCAATATCAGCCG+AGG | + | chr2.2:15090120-15090139 | None:intergenic | 45.0% | |
ATTTGTTTCAGCTGCTGCAG+AGG | - | chr2.2:15089307-15089326 | MS.gene059896:intron | 45.0% | |
CACTGTCGATCAAGCATAAC+TGG | + | chr2.2:15085817-15085836 | None:intergenic | 45.0% | |
CCAACTCTATCGTAATGTGG+AGG | + | chr2.2:15088230-15088249 | None:intergenic | 45.0% | |
CCTCCACATTACGATAGAGT+TGG | - | chr2.2:15088227-15088246 | MS.gene059896:intron | 45.0% | |
CTAAATGGCCCTGGGAAAAA+CGG | + | chr2.2:15086315-15086334 | None:intergenic | 45.0% | |
CTTGTTCCGTTATGGCTGAA+GGG | - | chr2.2:15086377-15086396 | MS.gene059896:intron | 45.0% | |
GAACATGACACCAGCATATC+CGG | - | chr2.2:15089951-15089970 | MS.gene059896:intron | 45.0% | |
GAGGGTTACTCTGAATTCCA+TGG | + | chr2.2:15090101-15090120 | None:intergenic | 45.0% | |
GCTGATGATATTAACTGGGC+AGG | - | chr2.2:15088927-15088946 | MS.gene059896:intron | 45.0% | |
GCTTAACGCCAAACACAAGA+AGG | - | chr2.2:15085509-15085528 | MS.gene059896:CDS | 45.0% | |
GGCTCCTAAGTCCAAAATGT+TGG | - | chr2.2:15087901-15087920 | MS.gene059896:intron | 45.0% | |
GGGAATCCAAAAACACCTTC+TGG | - | chr2.2:15088417-15088436 | MS.gene059896:intron | 45.0% | |
GTAGCAGGAACTGCATTTGA+TGG | + | chr2.2:15088552-15088571 | None:intergenic | 45.0% | |
GTAGCATAGTCTACTTTGGG+AGG | + | chr2.2:15088840-15088859 | None:intergenic | 45.0% | |
GTGTTTGGCGTTAAGCTCTT+TGG | + | chr2.2:15085505-15085524 | None:intergenic | 45.0% | |
GTTCTGCAACTCTTGACACT+TGG | - | chr2.2:15088016-15088035 | MS.gene059896:CDS | 45.0% | |
TCAACTTTCTCAGTGTGCTG+AGG | + | chr2.2:15088753-15088772 | None:intergenic | 45.0% | |
TCTTCGGTTTCCCTTCTCTT+CGG | - | chr2.2:15086738-15086757 | MS.gene059896:intron | 45.0% | |
TGACAGACATTCCAGACCAA+GGG | + | chr2.2:15087151-15087170 | None:intergenic | 45.0% | |
TGCTATGTTCCATTAGCCCT+TGG | - | chr2.2:15087132-15087151 | MS.gene059896:intron | 45.0% | |
TGGACAGAAACATTGGGACT+CGG | + | chr2.2:15089754-15089773 | None:intergenic | 45.0% | |
TTAGCACCAATATCAGCCGA+GGG | + | chr2.2:15090119-15090138 | None:intergenic | 45.0% | |
TTATCTTCACGCAGTCCAGA+AGG | + | chr2.2:15088435-15088454 | None:intergenic | 45.0% | |
TTTCTCAGTGTGCTGAGGTT+GGG | + | chr2.2:15088748-15088767 | None:intergenic | 45.0% | |
! | AAGAGATGGGTTTCAAGGGA+TGG | - | chr2.2:15088396-15088415 | MS.gene059896:intron | 45.0% |
! | AAGGAGGACTTGTTCCGTTA+TGG | - | chr2.2:15086369-15086388 | MS.gene059896:intron | 45.0% |
! | AGAGATGGGTTTCAAGGGAT+GGG | - | chr2.2:15088397-15088416 | MS.gene059896:intron | 45.0% |
! | AGCATAGTCTACTTTGGGAG+GGG | + | chr2.2:15088838-15088857 | None:intergenic | 45.0% |
! | ATCCCCCAAAAGTAGTCTTG+TGG | + | chr2.2:15090194-15090213 | None:intergenic | 45.0% |
! | ATCGTACTCCTTTGCTGACT+TGG | + | chr2.2:15090697-15090716 | None:intergenic | 45.0% |
! | CAGGAACTGCATTTGATGGT+TGG | + | chr2.2:15088548-15088567 | None:intergenic | 45.0% |
! | CCATGTCCACTATTTTCTGC+AGG | + | chr2.2:15088480-15088499 | None:intergenic | 45.0% |
! | GCTGAAGGGATTGATTTCAG+AGG | - | chr2.2:15086391-15086410 | MS.gene059896:CDS | 45.0% |
!! | AGTTTCAGCTTGTTGTTGCG+GGG | + | chr2.2:15088784-15088803 | None:intergenic | 45.0% |
!! | ATATGCTGGTGTCATGTTCC+TGG | + | chr2.2:15089950-15089969 | None:intergenic | 45.0% |
!! | CCTGCAGAAAATAGTGGACA+TGG | - | chr2.2:15088477-15088496 | MS.gene059896:intron | 45.0% |
!! | TGGTGTTATGAGCATAAGCC+TGG | + | chr2.2:15086280-15086299 | None:intergenic | 45.0% |
ACAGCAGCAGTCTCTTCTGA+TGG | - | chr2.2:15089672-15089691 | MS.gene059896:intron | 50.0% | |
ACTTTGCAGAGCTCCGAGAT+GGG | - | chr2.2:15087028-15087047 | MS.gene059896:intron | 50.0% | |
ATGGGCGCTACTCCAGATAT+CGG | + | chr2.2:15089799-15089818 | None:intergenic | 50.0% | |
CAACTCTCCCTGAACACCAA+TGG | + | chr2.2:15089818-15089837 | None:intergenic | 50.0% | |
CAGAGGCCTGCAGAAAATAG+TGG | - | chr2.2:15088471-15088490 | MS.gene059896:intron | 50.0% | |
CAGTTCCTGCTACAAGACGT+AGG | - | chr2.2:15088559-15088578 | MS.gene059896:intron | 50.0% | |
CATTCCAGACCAAGGGCTAA+TGG | + | chr2.2:15087144-15087163 | None:intergenic | 50.0% | |
CTAGTGACATACCCAGATGG+TGG | + | chr2.2:15089997-15090016 | None:intergenic | 50.0% | |
CTTTCTCAGTGTGCTGAGGT+TGG | + | chr2.2:15088749-15088768 | None:intergenic | 50.0% | |
GAAAATGGCTCCAAAGCAGC+TGG | - | chr2.2:15088897-15088916 | MS.gene059896:intron | 50.0% | |
GAGAAGGGAAACCGAAGATG+TGG | + | chr2.2:15086736-15086755 | None:intergenic | 50.0% | |
GAGTAACCCTCGGCTGATAT+TGG | - | chr2.2:15090110-15090129 | MS.gene059896:intron | 50.0% | |
GAGTTAGGTGAGACCCTTGA+AGG | + | chr2.2:15086214-15086233 | None:intergenic | 50.0% | |
GATATCGGGAATCCAGTAGC+CGG | + | chr2.2:15089784-15089803 | None:intergenic | 50.0% | |
GCTACTGGATTCCCGATATC+TGG | - | chr2.2:15089784-15089803 | MS.gene059896:intron | 50.0% | |
GCTGCTGCAGCTAAATCTAC+CGG | - | chr2.2:15089694-15089713 | MS.gene059896:intron | 50.0% | |
TACTCTCAACTGCGTTCGGT+GGG | + | chr2.2:15089355-15089374 | None:intergenic | 50.0% | |
TACTTTGCAGAGCTCCGAGA+TGG | - | chr2.2:15087027-15087046 | MS.gene059896:intron | 50.0% | |
TCAATTCCAGGTGCAGACAG+AGG | + | chr2.2:15089380-15089399 | None:intergenic | 50.0% | |
TCTGCACATTCCCGATTCTC+TGG | + | chr2.2:15086824-15086843 | None:intergenic | 50.0% | |
TCTGTCTGCACCTGGAATTG+AGG | - | chr2.2:15089379-15089398 | MS.gene059896:intron | 50.0% | |
TGCAGCTAAATCTACCGGTG+TGG | - | chr2.2:15089699-15089718 | MS.gene059896:intron | 50.0% | |
TGCATAAACACTGCCGGAGT+CGG | + | chr2.2:15087737-15087756 | None:intergenic | 50.0% | |
TGCTGACATGAGATCCGGAT+AGG | + | chr2.2:15086887-15086906 | None:intergenic | 50.0% | |
TGTTCCATTAGCCCTTGGTC+TGG | - | chr2.2:15087137-15087156 | MS.gene059896:intron | 50.0% | |
TTAGGTGAGACCCTTGAAGG+TGG | + | chr2.2:15086211-15086230 | None:intergenic | 50.0% | |
! | ATATCTGGAGTAGCGCCCAT+TGG | - | chr2.2:15089799-15089818 | MS.gene059896:intron | 50.0% |
! | GGAGTACTCTCAACTGCGTT+CGG | + | chr2.2:15089359-15089378 | None:intergenic | 50.0% |
! | TCATTTGGGATGGACTCTCC+AGG | - | chr2.2:15086259-15086278 | MS.gene059896:CDS | 50.0% |
!! | AGGGGTACTTTGAGCTGTGT+CGG | + | chr2.2:15088820-15088839 | None:intergenic | 50.0% |
!! | CTCCTTTGCTGACTTGGAAG+TGG | + | chr2.2:15090691-15090710 | None:intergenic | 50.0% |
!! | TTACTGCGAATCACCGACTC+CGG | - | chr2.2:15087721-15087740 | MS.gene059896:CDS | 50.0% |
!!! | CGCAGTCCAGAAGGTGTTTT+TGG | + | chr2.2:15088426-15088445 | None:intergenic | 50.0% |
AGACTGCTGCTGTGCTAGCA+TGG | + | chr2.2:15089665-15089684 | None:intergenic | 55.0% | |
AGCAGTAGCACCAGCTGCTT+TGG | + | chr2.2:15088910-15088929 | None:intergenic | 55.0% | |
AGGGTCTCACCTAACTCGTG+AGG | - | chr2.2:15086217-15086236 | MS.gene059896:intron | 55.0% | |
AGTACTCCTCTGTCTGCACC+TGG | - | chr2.2:15089371-15089390 | MS.gene059896:intron | 55.0% | |
ATGACACCAGCATATCCGGC+AGG | - | chr2.2:15089955-15089974 | MS.gene059896:intron | 55.0% | |
CTCGGCTGTTGCATGCTTGT+AGG | + | chr2.2:15089736-15089755 | None:intergenic | 55.0% | |
GAGCACATGTGCGTGTGTGT+GGG | + | chr2.2:15090326-15090345 | None:intergenic | 55.0% | |
GAGTTTCCTGCCGGATATGC+TGG | + | chr2.2:15089964-15089983 | None:intergenic | 55.0% | |
GGAACCCTACGTCTTGTAGC+AGG | + | chr2.2:15088567-15088586 | None:intergenic | 55.0% | |
GGATCTGAAGGGGTCCTATC+CGG | - | chr2.2:15086870-15086889 | MS.gene059896:CDS | 55.0% | |
GTACTCTCAACTGCGTTCGG+TGG | + | chr2.2:15089356-15089375 | None:intergenic | 55.0% | |
GTGTCAACAGCCGAGAAGAC+TGG | - | chr2.2:15089329-15089348 | MS.gene059896:intron | 55.0% | |
GTTCCTGGTCTGATCCAGAG+AGG | + | chr2.2:15089935-15089954 | None:intergenic | 55.0% | |
TGAGCACATGTGCGTGTGTG+TGG | + | chr2.2:15090327-15090346 | None:intergenic | 55.0% | |
TGGGCGCTACTCCAGATATC+GGG | + | chr2.2:15089798-15089817 | None:intergenic | 55.0% | |
TTGCCTCTCTGGATCAGACC+AGG | - | chr2.2:15089929-15089948 | MS.gene059896:intron | 55.0% | |
TTGGAAGTGGTTGACGTCGC+TGG | + | chr2.2:15090678-15090697 | None:intergenic | 55.0% | |
! | AGTAGCGCCCATTGGTGTTC+AGG | - | chr2.2:15089807-15089826 | MS.gene059896:intron | 55.0% |
! | CTTTGAGCTGTGTCGGTAGC+CGG | + | chr2.2:15088813-15088832 | None:intergenic | 55.0% |
! | GTAGCGCCCATTGGTGTTCA+GGG | - | chr2.2:15089808-15089827 | MS.gene059896:intron | 55.0% |
!! | GCTTGTTGTTGCGGGGTTAC+TGG | + | chr2.2:15088777-15088796 | None:intergenic | 55.0% |
!! | GGGCAAGTTGGTCCAGTCAA+TGG | - | chr2.2:15090615-15090634 | MS.gene059896:intron | 55.0% |
GACGTCGCTGGAGTTGACTG+AGG | + | chr2.2:15090666-15090685 | None:intergenic | 60.0% | |
GCAGGCCTCTGCTGATGTGA+AGG | + | chr2.2:15088462-15088481 | None:intergenic | 60.0% | |
GTGTGCTGAGGTTGGGTAGC+AGG | + | chr2.2:15088741-15088760 | None:intergenic | 60.0% | |
TAGGGTTCCAGCTCCTCGCA+AGG | - | chr2.2:15088578-15088597 | MS.gene059896:intron | 60.0% | |
TCCAGCTCCTCGCAAGGTAC+CGG | - | chr2.2:15088584-15088603 | MS.gene059896:intron | 60.0% | |
! | GTTCGGTGGGCCAGTCTTCT+CGG | + | chr2.2:15089342-15089361 | None:intergenic | 60.0% |
! | TTGCTGAGCTGTGCTGCTGC+AGG | - | chr2.2:15087657-15087676 | MS.gene059896:CDS | 60.0% |
ACCTGCTCCGGTACCTTGCG+AGG | + | chr2.2:15088594-15088613 | None:intergenic | 65.0% | |
TCCGGTACCTTGCGAGGAGC+TGG | + | chr2.2:15088588-15088607 | None:intergenic | 65.0% | |
!! | TCCTCGCAAGGTACCGGAGC+AGG | - | chr2.2:15088590-15088609 | MS.gene059896:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 15085480 | 15090755 | 15085480 | ID=MS.gene059896 |
chr2.2 | mRNA | 15085480 | 15090755 | 15085480 | ID=MS.gene059896.t1;Parent=MS.gene059896 |
chr2.2 | exon | 15090705 | 15090755 | 15090705 | ID=MS.gene059896.t1.exon1;Parent=MS.gene059896.t1 |
chr2.2 | CDS | 15090705 | 15090755 | 15090705 | ID=cds.MS.gene059896.t1;Parent=MS.gene059896.t1 |
chr2.2 | exon | 15089380 | 15089438 | 15089380 | ID=MS.gene059896.t1.exon2;Parent=MS.gene059896.t1 |
chr2.2 | CDS | 15089380 | 15089438 | 15089380 | ID=cds.MS.gene059896.t1;Parent=MS.gene059896.t1 |
chr2.2 | exon | 15089108 | 15089198 | 15089108 | ID=MS.gene059896.t1.exon3;Parent=MS.gene059896.t1 |
chr2.2 | CDS | 15089108 | 15089198 | 15089108 | ID=cds.MS.gene059896.t1;Parent=MS.gene059896.t1 |
chr2.2 | exon | 15088169 | 15088223 | 15088169 | ID=MS.gene059896.t1.exon4;Parent=MS.gene059896.t1 |
chr2.2 | CDS | 15088169 | 15088223 | 15088169 | ID=cds.MS.gene059896.t1;Parent=MS.gene059896.t1 |
chr2.2 | exon | 15087962 | 15088052 | 15087962 | ID=MS.gene059896.t1.exon5;Parent=MS.gene059896.t1 |
chr2.2 | CDS | 15087962 | 15088052 | 15087962 | ID=cds.MS.gene059896.t1;Parent=MS.gene059896.t1 |
chr2.2 | exon | 15087624 | 15087849 | 15087624 | ID=MS.gene059896.t1.exon6;Parent=MS.gene059896.t1 |
chr2.2 | CDS | 15087624 | 15087849 | 15087624 | ID=cds.MS.gene059896.t1;Parent=MS.gene059896.t1 |
chr2.2 | exon | 15087278 | 15087503 | 15087278 | ID=MS.gene059896.t1.exon7;Parent=MS.gene059896.t1 |
chr2.2 | CDS | 15087278 | 15087503 | 15087278 | ID=cds.MS.gene059896.t1;Parent=MS.gene059896.t1 |
chr2.2 | exon | 15086739 | 15086917 | 15086739 | ID=MS.gene059896.t1.exon8;Parent=MS.gene059896.t1 |
chr2.2 | CDS | 15086739 | 15086917 | 15086739 | ID=cds.MS.gene059896.t1;Parent=MS.gene059896.t1 |
chr2.2 | exon | 15086383 | 15086616 | 15086383 | ID=MS.gene059896.t1.exon9;Parent=MS.gene059896.t1 |
chr2.2 | CDS | 15086383 | 15086616 | 15086383 | ID=cds.MS.gene059896.t1;Parent=MS.gene059896.t1 |
chr2.2 | exon | 15086231 | 15086289 | 15086231 | ID=MS.gene059896.t1.exon10;Parent=MS.gene059896.t1 |
chr2.2 | CDS | 15086231 | 15086289 | 15086231 | ID=cds.MS.gene059896.t1;Parent=MS.gene059896.t1 |
chr2.2 | exon | 15085480 | 15085633 | 15085480 | ID=MS.gene059896.t1.exon11;Parent=MS.gene059896.t1 |
chr2.2 | CDS | 15085480 | 15085633 | 15085480 | ID=cds.MS.gene059896.t1;Parent=MS.gene059896.t1 |
Gene Sequence |
Protein sequence |