Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08387.t1 | RHN42290.1 | 98.9 | 363 | 4 | 0 | 1 | 363 | 1 | 363 | 4.40E-127 | 464.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08387.t1 | F4IP06 | 58.1 | 360 | 146 | 2 | 9 | 363 | 4 | 363 | 1.7e-71 | 271.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08387.t1 | A0A396GMM6 | 98.9 | 363 | 4 | 0 | 1 | 363 | 1 | 363 | 3.2e-127 | 464.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049808 | MS.gene08387 | 0.806647 | 7.43E-50 | -1.69E-46 |
| MS.gene050237 | MS.gene08387 | 0.801245 | 9.86E-49 | -1.69E-46 |
| MS.gene050386 | MS.gene08387 | 0.804707 | 1.90E-49 | -1.69E-46 |
| MS.gene055512 | MS.gene08387 | 0.801241 | 9.88E-49 | -1.69E-46 |
| MS.gene056760 | MS.gene08387 | 0.809846 | 1.55E-50 | -1.69E-46 |
| MS.gene057057 | MS.gene08387 | 0.804523 | 2.07E-49 | -1.69E-46 |
| MS.gene057234 | MS.gene08387 | 0.829784 | 4.24E-55 | -1.69E-46 |
| MS.gene058055 | MS.gene08387 | 0.812701 | 3.71E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08387.t1 | AT2G36740 | 59.710 | 345 | 130 | 3 | 14 | 351 | 9 | 351 | 1.77e-129 | 375 |
| MS.gene08387.t1 | AT2G36740 | 62.126 | 301 | 105 | 3 | 10 | 303 | 5 | 303 | 2.01e-116 | 341 |
Find 65 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCATCATTATCATCAATTT+TGG | 0.077559 | 4.1:-17423300 | None:intergenic |
| GAAGAAAATCTTATCTAATT+TGG | 0.115613 | 4.1:+17423268 | MS.gene08387:CDS |
| GGCTTATATGATTCAGTTTC+TGG | 0.127458 | 4.1:+17426979 | MS.gene08387:CDS |
| AATTATGAACTTGAGGAATT+TGG | 0.176156 | 4.1:+17424268 | MS.gene08387:CDS |
| TCGCCTTTCTTCCTTATTAC+TGG | 0.196750 | 4.1:-17424085 | None:intergenic |
| TATGATTCAGTTTCTGGATA+TGG | 0.207235 | 4.1:+17426985 | MS.gene08387:CDS |
| GTGCATAAAACTGTCTTTAA+TGG | 0.216607 | 4.1:+17424335 | MS.gene08387:CDS |
| CGGCGATTTCGGCTTCTTCT+TGG | 0.253320 | 4.1:-17423018 | None:intergenic |
| GTCGAATTCGTCGGCGATTT+CGG | 0.266319 | 4.1:-17423029 | None:intergenic |
| TTCAACAAGATGAATTGTTC+TGG | 0.284399 | 4.1:+17422954 | MS.gene08387:CDS |
| CAACCTGTTTGCGTTATTAC+TGG | 0.293930 | 4.1:+17425840 | MS.gene08387:CDS |
| CTCTAGAAAAGAAACGAATA+TGG | 0.304931 | 4.1:+17426954 | MS.gene08387:CDS |
| GGCTGTTCTTCATCGGGTTC+AGG | 0.307025 | 4.1:-17423164 | None:intergenic |
| GCGAACAATGACGGAAGTTC+TGG | 0.369171 | 4.1:-17423396 | None:intergenic |
| ATAACGCAAACAGGTTGTTC+TGG | 0.392827 | 4.1:-17425834 | None:intergenic |
| CGTATTTGGAGTTTACTAAA+GGG | 0.400482 | 4.1:+17424477 | MS.gene08387:CDS |
| ACAATGGAGGAAAAGAATTC+AGG | 0.402275 | 4.1:+17422842 | None:intergenic |
| GCGTATGGCAGCCCAGTCTT+TGG | 0.402777 | 4.1:-17426044 | None:intergenic |
| GATATTGGAGATAACCTTGT+AGG | 0.403997 | 4.1:-17423459 | None:intergenic |
| AGATGAATTGTTCTGGGGTC+AGG | 0.416421 | 4.1:+17422961 | MS.gene08387:CDS |
| ATACACTACATATCACAAAA+TGG | 0.416807 | 4.1:+17424365 | MS.gene08387:CDS |
| AAGAAGCGATTGGTATATCC+TGG | 0.422746 | 4.1:+17423215 | MS.gene08387:CDS |
| TCAACAAGATGAATTGTTCT+GGG | 0.454323 | 4.1:+17422955 | MS.gene08387:CDS |
| CTTCCTAATCATTACCTCCT+TGG | 0.455438 | 4.1:-17423369 | None:intergenic |
| TTAGCCAATGTCGCCTTCCC+AGG | 0.459198 | 4.1:-17423233 | None:intergenic |
| CCTCCTTGGCATCATCGTCC+TGG | 0.471257 | 4.1:-17423355 | None:intergenic |
| TCGTATTTGGAGTTTACTAA+AGG | 0.472369 | 4.1:+17424476 | MS.gene08387:CDS |
| ATGCCAAGGAGGTAATGATT+AGG | 0.476554 | 4.1:+17423366 | MS.gene08387:CDS |
| CACATGATCGGTCCTTGGCT+CGG | 0.478772 | 4.1:+17427058 | MS.gene08387:CDS |
| GAATGGCTTCTCTTTCAGCT+TGG | 0.491571 | 4.1:-17423418 | None:intergenic |
| AGTTACGTCTTGATCGAAAT+CGG | 0.494921 | 4.1:-17423053 | None:intergenic |
| TCGCTCGAGATGCACGATCC+AGG | 0.497894 | 4.1:-17422892 | None:intergenic |
| AAACCAGTAATAACGCAAAC+AGG | 0.498211 | 4.1:-17425843 | None:intergenic |
| AAGAAAGGCTCTTACTTGGC+AGG | 0.501328 | 4.1:-17425867 | None:intergenic |
| GAGATCGAATCTTCTACTCC+TGG | 0.510703 | 4.1:+17422874 | MS.gene08387:CDS |
| TTCAGCTTGGCGAACAATGA+CGG | 0.524822 | 4.1:-17423405 | None:intergenic |
| ACATCCACATGATCGGTCCT+TGG | 0.525200 | 4.1:+17427053 | MS.gene08387:CDS |
| AGGTACCGTGATCCAAAGAC+TGG | 0.525622 | 4.1:+17426032 | MS.gene08387:intron |
| GAATCTTCATCCTCAAAAGT+AGG | 0.528439 | 4.1:-17427093 | None:intergenic |
| CTGCAGAAATTATGAACTTG+AGG | 0.529753 | 4.1:+17424261 | MS.gene08387:intron |
| TGCTTTGAGAGCTTCGCGAA+TGG | 0.533499 | 4.1:-17423435 | None:intergenic |
| TCTAGAAAAGAAACGAATAT+GGG | 0.542033 | 4.1:+17426955 | MS.gene08387:CDS |
| ATATCCTGGGAAGGCGACAT+TGG | 0.555043 | 4.1:+17423229 | MS.gene08387:CDS |
| AAAATATACATCCACATGAT+CGG | 0.556585 | 4.1:+17427046 | MS.gene08387:CDS |
| AAAATTGATGATAATGATGA+CGG | 0.559093 | 4.1:+17423302 | MS.gene08387:CDS |
| CAGCCAGTAATAAGGAAGAA+AGG | 0.573774 | 4.1:+17424082 | MS.gene08387:intron |
| AGCTCTCAAAGCAACCTACA+AGG | 0.574053 | 4.1:+17423445 | MS.gene08387:CDS |
| CGTGCATCTCGAGCGACAAG+AGG | 0.584790 | 4.1:+17422899 | MS.gene08387:CDS |
| AGAAGCGATTGGTATATCCT+GGG | 0.596937 | 4.1:+17423216 | MS.gene08387:CDS |
| GTATTTGGAGTTTACTAAAG+GGG | 0.598121 | 4.1:+17424478 | MS.gene08387:CDS |
| CGCACATTCTTGAGACGTTG+TGG | 0.601571 | 4.1:-17424522 | None:intergenic |
| CGAGCCAAGGACCGATCATG+TGG | 0.604117 | 4.1:-17427057 | None:intergenic |
| GGAGAAGAAAATGTCACAAG+AGG | 0.609231 | 4.1:+17424108 | MS.gene08387:CDS |
| TGTGATATGTAGTGTATCTG+TGG | 0.609479 | 4.1:-17424359 | None:intergenic |
| GCAGCCCAGTCTTTGGATCA+CGG | 0.611548 | 4.1:-17426037 | None:intergenic |
| CAACCAGGACGATGATGCCA+AGG | 0.612779 | 4.1:+17423352 | MS.gene08387:CDS |
| AAACAACAAGAACAACAACC+AGG | 0.612812 | 4.1:+17423337 | MS.gene08387:CDS |
| GCGATTGGTATATCCTGGGA+AGG | 0.627485 | 4.1:+17423220 | MS.gene08387:CDS |
| AGAAAAGAAACGAATATGGG+AGG | 0.647868 | 4.1:+17426958 | MS.gene08387:CDS |
| AATTCTACGAAACCGAGCCA+AGG | 0.655235 | 4.1:-17427070 | None:intergenic |
| CAACAAGATGAATTGTTCTG+GGG | 0.658361 | 4.1:+17422956 | MS.gene08387:CDS |
| GAAATCGGAGTCGAATTCGT+CGG | 0.659651 | 4.1:-17423038 | None:intergenic |
| AGTAATAAGGAAGAAAGGCG+AGG | 0.677909 | 4.1:+17424087 | MS.gene08387:CDS |
| CCAGGACGATGATGCCAAGG+AGG | 0.685706 | 4.1:+17423355 | MS.gene08387:CDS |
| GGTACCGTGATCCAAAGACT+GGG | 0.697285 | 4.1:+17426033 | MS.gene08387:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTTTTTTTTTCTTTTTTT+TGG | + | chr4.1:17424057-17424076 | MS.gene08387:intron | 10.0% |
| !! | TACTGTTATAAAAGAATATT+AGG | - | chr4.1:17426156-17426175 | None:intergenic | 15.0% |
| !! | TTATAAGAACAATTATAACT+AGG | - | chr4.1:17426668-17426687 | None:intergenic | 15.0% |
| !! | TTCAATACAAAAAAAATTGA+CGG | + | chr4.1:17425481-17425500 | MS.gene08387:intron | 15.0% |
| !!! | ATCATAAAAAGTTATCTTTT+TGG | - | chr4.1:17426224-17426243 | None:intergenic | 15.0% |
| !!! | CTAACTAATTTTTGTAAATT+CGG | - | chr4.1:17424890-17424909 | None:intergenic | 15.0% |
| !!! | GTTTAATTAGTTTAAAGTTA+GGG | + | chr4.1:17425503-17425522 | MS.gene08387:intron | 15.0% |
| !! | AAATATAGTGCTAGAATAAA+AGG | - | chr4.1:17424550-17424569 | None:intergenic | 20.0% |
| !! | AACTTAAATGCTTATCATAT+AGG | - | chr4.1:17423977-17423996 | None:intergenic | 20.0% |
| !! | AATATAGTGCTAGAATAAAA+GGG | - | chr4.1:17424549-17424568 | None:intergenic | 20.0% |
| !! | CGAATTTACAAAAATTAGTT+AGG | + | chr4.1:17424888-17424907 | MS.gene08387:intron | 20.0% |
| !! | CTTATTTCAATAATCTTTCT+GGG | - | chr4.1:17423772-17423791 | None:intergenic | 20.0% |
| !! | GAAGAAAATCTTATCTAATT+TGG | + | chr4.1:17423268-17423287 | MS.gene08387:CDS | 20.0% |
| !! | TACAAAAATTAGTTAGGTTT+AGG | + | chr4.1:17424894-17424913 | MS.gene08387:intron | 20.0% |
| !! | TTAGTAATTCAATAACATCA+TGG | - | chr4.1:17426339-17426358 | None:intergenic | 20.0% |
| !! | TTATTTCAATAATCTTTCTG+GGG | - | chr4.1:17423771-17423790 | None:intergenic | 20.0% |
| !!! | AAAATTGATGATAATGATGA+CGG | + | chr4.1:17423302-17423321 | MS.gene08387:CDS | 20.0% |
| !!! | AAATATAAAAGCATTCATGT+GGG | + | chr4.1:17426786-17426805 | MS.gene08387:intron | 20.0% |
| !!! | ACTAAGTGTTTTAGATAATT+AGG | + | chr4.1:17425174-17425193 | MS.gene08387:intron | 20.0% |
| !!! | ATTAGTTTATAGACAATAAC+TGG | + | chr4.1:17424705-17424724 | MS.gene08387:intron | 20.0% |
| !!! | ATTTTTGTAAATTCGGTATT+TGG | - | chr4.1:17424883-17424902 | None:intergenic | 20.0% |
| !!! | CTAAGTGTTTTAGATAATTA+GGG | + | chr4.1:17425175-17425194 | MS.gene08387:intron | 20.0% |
| !!! | CTTGTAATTGATTTTAATTG+GGG | + | chr4.1:17426898-17426917 | MS.gene08387:intron | 20.0% |
| !!! | CTTTTAAAATAATTCGACAA+CGG | + | chr4.1:17426078-17426097 | MS.gene08387:CDS | 20.0% |
| !!! | GCTTGTAATTGATTTTAATT+GGG | + | chr4.1:17426897-17426916 | MS.gene08387:intron | 20.0% |
| !!! | GGTTTAATTAGTTTAAAGTT+AGG | + | chr4.1:17425502-17425521 | MS.gene08387:intron | 20.0% |
| !!! | GTAAAACTTTTTCTACTTAA+AGG | - | chr4.1:17425294-17425313 | None:intergenic | 20.0% |
| !!! | TAAATATAAAAGCATTCATG+TGG | + | chr4.1:17426785-17426804 | MS.gene08387:intron | 20.0% |
| !!! | TCATCATTATCATCAATTTT+GGG | - | chr4.1:17423302-17423321 | None:intergenic | 20.0% |
| !!! | TGCTTGTAATTGATTTTAAT+TGG | + | chr4.1:17426896-17426915 | MS.gene08387:intron | 20.0% |
| !!! | TTTATTCTAGCACTATATTT+TGG | + | chr4.1:17424550-17424569 | MS.gene08387:intron | 20.0% |
| !!! | TTTTATCTATTGTTGTGATA+AGG | - | chr4.1:17423700-17423719 | None:intergenic | 20.0% |
| ! | AAAAAAAAAAGTAGTTCAGC+CGG | + | chr4.1:17425946-17425965 | MS.gene08387:intron | 25.0% |
| ! | AAAATATACATCCACATGAT+CGG | + | chr4.1:17427046-17427065 | MS.gene08387:CDS | 25.0% |
| ! | AAATTAGTTAGGTTTAGGAA+AGG | + | chr4.1:17424899-17424918 | MS.gene08387:intron | 25.0% |
| ! | AAGCATAATTGAAACATCAA+AGG | - | chr4.1:17424235-17424254 | None:intergenic | 25.0% |
| ! | AATGAATAAAAAGAAGCGAT+TGG | + | chr4.1:17423205-17423224 | MS.gene08387:CDS | 25.0% |
| ! | AATGACGAAACAATTTCTTT+GGG | - | chr4.1:17424649-17424668 | None:intergenic | 25.0% |
| ! | AATTATGAACTTGAGGAATT+TGG | + | chr4.1:17424268-17424287 | MS.gene08387:CDS | 25.0% |
| ! | ACAGATTGCTATATGTAAAA+TGG | - | chr4.1:17424439-17424458 | None:intergenic | 25.0% |
| ! | AGGATTAAACACAATTTCAT+GGG | - | chr4.1:17426648-17426667 | None:intergenic | 25.0% |
| ! | ATACACTACATATCACAAAA+TGG | + | chr4.1:17424365-17424384 | MS.gene08387:CDS | 25.0% |
| ! | ATGTAATATATTCCGTTTCT+TGG | + | chr4.1:17424592-17424611 | MS.gene08387:intron | 25.0% |
| ! | ATGTATAGTAAACAATGAGT+AGG | + | chr4.1:17424937-17424956 | MS.gene08387:intron | 25.0% |
| ! | CTTAACAGAATCTATGTAAA+TGG | + | chr4.1:17423878-17423897 | MS.gene08387:intron | 25.0% |
| ! | GAATTCGTTAGAGAAAAAAT+TGG | + | chr4.1:17425452-17425471 | MS.gene08387:intron | 25.0% |
| ! | GCTTATTTCAATAATCTTTC+TGG | - | chr4.1:17423773-17423792 | None:intergenic | 25.0% |
| ! | TAAGATTTGCAACTATGTAT+GGG | + | chr4.1:17425324-17425343 | MS.gene08387:intron | 25.0% |
| ! | TAATTCAATAACATCATGGT+GGG | - | chr4.1:17426335-17426354 | None:intergenic | 25.0% |
| ! | TACATAGATTCTGTTAAGAT+TGG | - | chr4.1:17423876-17423895 | None:intergenic | 25.0% |
| ! | TAGGATTAAACACAATTTCA+TGG | - | chr4.1:17426649-17426668 | None:intergenic | 25.0% |
| ! | TCTAGAAAAGAAACGAATAT+GGG | + | chr4.1:17426955-17426974 | MS.gene08387:CDS | 25.0% |
| ! | TGAATCACAGAAAAAGATAT+TGG | - | chr4.1:17423477-17423496 | None:intergenic | 25.0% |
| ! | TTGTACCTCAAATATTGTTA+AGG | + | chr4.1:17425993-17426012 | MS.gene08387:intron | 25.0% |
| !! | ATCTTTTTCTGTGATTCATT+AGG | + | chr4.1:17423479-17423498 | MS.gene08387:intron | 25.0% |
| !! | GTCATCATTATCATCAATTT+TGG | - | chr4.1:17423303-17423322 | None:intergenic | 25.0% |
| !! | TAACAATATTTGAGGTACAA+TGG | - | chr4.1:17425993-17426012 | None:intergenic | 25.0% |
| !! | TAATTCTTCTTGATTTTCTC+AGG | + | chr4.1:17423139-17423158 | MS.gene08387:intron | 25.0% |
| !! | TATCTAAAACACTTAGTTGT+GGG | - | chr4.1:17425171-17425190 | None:intergenic | 25.0% |
| !! | TCTTTTTCTGTGATTCATTA+GGG | + | chr4.1:17423480-17423499 | MS.gene08387:intron | 25.0% |
| !! | TGATGTTTCAATTATGCTTT+TGG | + | chr4.1:17424236-17424255 | MS.gene08387:intron | 25.0% |
| !! | TTATCTAAAACACTTAGTTG+TGG | - | chr4.1:17425172-17425191 | None:intergenic | 25.0% |
| !!! | AGCAATCTGTTTATTTTTTC+AGG | + | chr4.1:17424449-17424468 | MS.gene08387:intron | 25.0% |
| AAGTTTACTTGCAATCAAGA+AGG | - | chr4.1:17426109-17426128 | None:intergenic | 30.0% | |
| AATTCAATAACATCATGGTG+GGG | - | chr4.1:17426334-17426353 | None:intergenic | 30.0% | |
| ACATAGTTGCAAATCTTACT+AGG | - | chr4.1:17425322-17425341 | None:intergenic | 30.0% | |
| ACTACATATCACAAAATGGT+TGG | + | chr4.1:17424369-17424388 | MS.gene08387:intron | 30.0% | |
| ATAATATGTGAGGTTGAAGA+TGG | + | chr4.1:17425585-17425604 | MS.gene08387:intron | 30.0% | |
| ATAGTAAACAATGAGTAGGA+AGG | + | chr4.1:17424941-17424960 | MS.gene08387:intron | 30.0% | |
| ATTGTTGGATAGCTAATGAT+GGG | + | chr4.1:17426531-17426550 | MS.gene08387:intron | 30.0% | |
| CAAAGAAATTGTTTCGTCAT+TGG | + | chr4.1:17424648-17424667 | MS.gene08387:intron | 30.0% | |
| CAATGACGAAACAATTTCTT+TGG | - | chr4.1:17424650-17424669 | None:intergenic | 30.0% | |
| CTATCTTGAAAAACAGCTTA+TGG | - | chr4.1:17423641-17423660 | None:intergenic | 30.0% | |
| CTTATAACAGCTTATGAACA+TGG | + | chr4.1:17423792-17423811 | MS.gene08387:intron | 30.0% | |
| GAAAACTAAAACAAACAAGC+AGG | - | chr4.1:17424205-17424224 | None:intergenic | 30.0% | |
| GAACTCCTTAACAATATTTG+AGG | - | chr4.1:17426001-17426020 | None:intergenic | 30.0% | |
| GAACTTTATGAACCAAGAAA+CGG | - | chr4.1:17424607-17424626 | None:intergenic | 30.0% | |
| GGTCAATATTAGAATACACT+TGG | + | chr4.1:17424157-17424176 | MS.gene08387:intron | 30.0% | |
| GTAAGATTTGCAACTATGTA+TGG | + | chr4.1:17425323-17425342 | MS.gene08387:intron | 30.0% | |
| GTAATTCAATAACATCATGG+TGG | - | chr4.1:17426336-17426355 | None:intergenic | 30.0% | |
| GTGCATAAAACTGTCTTTAA+TGG | + | chr4.1:17424335-17424354 | MS.gene08387:CDS | 30.0% | |
| GTTAATGTGATTCACTTCAT+AGG | + | chr4.1:17426177-17426196 | MS.gene08387:intron | 30.0% | |
| TAGACAATAACTGGAATAAC+TGG | + | chr4.1:17424714-17424733 | MS.gene08387:intron | 30.0% | |
| TATTGTTGGATAGCTAATGA+TGG | + | chr4.1:17426530-17426549 | MS.gene08387:intron | 30.0% | |
| TCAACAAGATGAATTGTTCT+GGG | + | chr4.1:17422955-17422974 | MS.gene08387:CDS | 30.0% | |
| TCACATCAATACATCAAGAA+AGG | - | chr4.1:17425885-17425904 | None:intergenic | 30.0% | |
| TCTGAAAAGCTAGAGAAATT+GGG | - | chr4.1:17426589-17426608 | None:intergenic | 30.0% | |
| TGACATTATAACAAGTGCTA+AGG | + | chr4.1:17424807-17424826 | MS.gene08387:intron | 30.0% | |
| TGGTTAATGATAGTAGGATT+AGG | + | chr4.1:17426812-17426831 | MS.gene08387:intron | 30.0% | |
| TTATAATCCAACTGAACTAC+TGG | - | chr4.1:17425925-17425944 | None:intergenic | 30.0% | |
| TTCAACAAGATGAATTGTTC+TGG | + | chr4.1:17422954-17422973 | MS.gene08387:CDS | 30.0% | |
| TTCAACCTCACATATTATGA+AGG | - | chr4.1:17425583-17425602 | None:intergenic | 30.0% | |
| ! | AACATTTTCAGACCATAATC+AGG | - | chr4.1:17424042-17424061 | None:intergenic | 30.0% |
| ! | ATTCTTTCATCATCGTTTTG+TGG | - | chr4.1:17423188-17423207 | None:intergenic | 30.0% |
| ! | CGTATTTGGAGTTTACTAAA+GGG | + | chr4.1:17424477-17424496 | MS.gene08387:CDS | 30.0% |
| ! | CTCTAGAAAAGAAACGAATA+TGG | + | chr4.1:17426954-17426973 | MS.gene08387:CDS | 30.0% |
| ! | GCAGTTGAACATAAATGTTT+TGG | + | chr4.1:17424831-17424850 | MS.gene08387:intron | 30.0% |
| ! | GTATTTGGAGTTTACTAAAG+GGG | + | chr4.1:17424478-17424497 | MS.gene08387:CDS | 30.0% |
| ! | TAATCGGTATGAATGAGTTT+TGG | - | chr4.1:17423085-17423104 | None:intergenic | 30.0% |
| ! | TATGATTCAGTTTCTGGATA+TGG | + | chr4.1:17426985-17427004 | MS.gene08387:CDS | 30.0% |
| ! | TCATTATCATCAATTTTGGG+AGG | - | chr4.1:17423299-17423318 | None:intergenic | 30.0% |
| ! | TCGTATTTGGAGTTTACTAA+AGG | + | chr4.1:17424476-17424495 | MS.gene08387:CDS | 30.0% |
| ! | TGAGAAGAATTTAAAGTACC+CGG | + | chr4.1:17425676-17425695 | MS.gene08387:intron | 30.0% |
| ! | TTCAGATGGTATCATTTTAC+TGG | + | chr4.1:17424774-17424793 | MS.gene08387:intron | 30.0% |
| !! | ATGTTGGTAACTCTTACAAA+TGG | + | chr4.1:17425609-17425628 | MS.gene08387:intron | 30.0% |
| !! | TGCATTTAGTTTGGTTGTAT+TGG | + | chr4.1:17424407-17424426 | MS.gene08387:intron | 30.0% |
| !! | TGTTGGTAACTCTTACAAAT+GGG | + | chr4.1:17425610-17425629 | MS.gene08387:intron | 30.0% |
| !!! | ATAAATGTTTTGGAGACCAA+GGG | + | chr4.1:17424841-17424860 | MS.gene08387:intron | 30.0% |
| !!! | TTTTTCAGGTTGTTCGTATT+TGG | + | chr4.1:17424463-17424482 | MS.gene08387:intron | 30.0% |
| AAACAACAAGAACAACAACC+AGG | + | chr4.1:17423337-17423356 | MS.gene08387:CDS | 35.0% | |
| AAACCAGTAATAACGCAAAC+AGG | - | chr4.1:17425846-17425865 | None:intergenic | 35.0% | |
| AAGTTAGGGTAGCTACTATA+TGG | + | chr4.1:17425517-17425536 | MS.gene08387:intron | 35.0% | |
| AATAACTGGACACATTCCAA+AGG | + | chr4.1:17424728-17424747 | MS.gene08387:intron | 35.0% | |
| ACAACCAAACTAAATGCACA+TGG | - | chr4.1:17424405-17424424 | None:intergenic | 35.0% | |
| ACATGCCTTCATAATATGTG+AGG | + | chr4.1:17425575-17425594 | MS.gene08387:intron | 35.0% | |
| AGAAAAGAAACGAATATGGG+AGG | + | chr4.1:17426958-17426977 | MS.gene08387:CDS | 35.0% | |
| AGATAGCTTATGCTTCTGTT+TGG | + | chr4.1:17423655-17423674 | MS.gene08387:intron | 35.0% | |
| AGTTACGTCTTGATCGAAAT+CGG | - | chr4.1:17423056-17423075 | None:intergenic | 35.0% | |
| ATAGACAAAGGGAAATCTTC+CGG | - | chr4.1:17425968-17425987 | None:intergenic | 35.0% | |
| ATGTATGGGTCAGAAATGTT+GGG | + | chr4.1:17425338-17425357 | MS.gene08387:intron | 35.0% | |
| CAACAAGATGAATTGTTCTG+GGG | + | chr4.1:17422956-17422975 | MS.gene08387:CDS | 35.0% | |
| CATTCCATGTGCATTTAGTT+TGG | + | chr4.1:17424398-17424417 | MS.gene08387:intron | 35.0% | |
| CTGCAGAAATTATGAACTTG+AGG | + | chr4.1:17424261-17424280 | MS.gene08387:intron | 35.0% | |
| CTTAAGATGACATGGTTCAT+TGG | - | chr4.1:17426412-17426431 | None:intergenic | 35.0% | |
| CTTTCCTTCTTAAGATGACA+TGG | - | chr4.1:17426420-17426439 | None:intergenic | 35.0% | |
| GAATCTTCATCCTCAAAAGT+AGG | - | chr4.1:17427096-17427115 | None:intergenic | 35.0% | |
| GATATTGGAGATAACCTTGT+AGG | - | chr4.1:17423462-17423481 | None:intergenic | 35.0% | |
| GCAATCATGAGCATAAATGA+TGG | + | chr4.1:17425370-17425389 | MS.gene08387:intron | 35.0% | |
| GGCTTATATGATTCAGTTTC+TGG | + | chr4.1:17426979-17426998 | MS.gene08387:CDS | 35.0% | |
| GGGTCTATCTTACAAAAGAA+AGG | + | chr4.1:17425195-17425214 | MS.gene08387:intron | 35.0% | |
| GGTTTGATCTAATGTTCCAT+AGG | + | chr4.1:17426286-17426305 | MS.gene08387:intron | 35.0% | |
| GTAACTCTTACAAATGGGTA+GGG | + | chr4.1:17425615-17425634 | MS.gene08387:intron | 35.0% | |
| GTACAATGGCTATAGACAAA+GGG | - | chr4.1:17425979-17425998 | None:intergenic | 35.0% | |
| GTTCTTCTAAACAATATCCC+AGG | + | chr4.1:17423820-17423839 | MS.gene08387:intron | 35.0% | |
| TAAACACAATTTCATGGGTG+TGG | - | chr4.1:17426643-17426662 | None:intergenic | 35.0% | |
| TAACTCTTACAAATGGGTAG+GGG | + | chr4.1:17425616-17425635 | MS.gene08387:intron | 35.0% | |
| TACATAGAATTTCCTGATGC+CGG | - | chr4.1:17425698-17425717 | None:intergenic | 35.0% | |
| TATGTATGGGTCAGAAATGT+TGG | + | chr4.1:17425337-17425356 | MS.gene08387:intron | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr4.1:17425066-17425085 | None:intergenic | 35.0% | |
| TGAACCATGTCATCTTAAGA+AGG | + | chr4.1:17426413-17426432 | MS.gene08387:intron | 35.0% | |
| TGAGCATAAATGATGGTTGT+AGG | + | chr4.1:17425377-17425396 | MS.gene08387:intron | 35.0% | |
| TGTATTTGTGCTCATCTAGT+GGG | + | chr4.1:17423561-17423580 | MS.gene08387:intron | 35.0% | |
| TGTGATATGTAGTGTATCTG+TGG | - | chr4.1:17424362-17424381 | None:intergenic | 35.0% | |
| TTAGTTAGGTTTAGGAAAGG+AGG | + | chr4.1:17424902-17424921 | MS.gene08387:intron | 35.0% | |
| TTCCAAACAACACCTGATTA+TGG | + | chr4.1:17424027-17424046 | MS.gene08387:intron | 35.0% | |
| TTGAAGTAGAGAAATGCTTC+AGG | + | chr4.1:17425256-17425275 | MS.gene08387:intron | 35.0% | |
| TTGATCTAATGTTCCATAGG+AGG | + | chr4.1:17426289-17426308 | MS.gene08387:intron | 35.0% | |
| TTGATTACCAGTAGTTCAGT+TGG | + | chr4.1:17425915-17425934 | MS.gene08387:intron | 35.0% | |
| ! | AAAGCTTCTTTTGTAGCGTA+TGG | - | chr4.1:17426062-17426081 | None:intergenic | 35.0% |
| ! | AGCATTTAAGTTAGAAGCAC+TGG | + | chr4.1:17423985-17424004 | MS.gene08387:intron | 35.0% |
| ! | CATTGTCGATCTCTTTTTCT+TGG | - | chr4.1:17427019-17427038 | None:intergenic | 35.0% |
| ! | CTCTGAAAAGCTAGAGAAAT+TGG | - | chr4.1:17426590-17426609 | None:intergenic | 35.0% |
| ! | TCACATATTATGAAGGCATG+TGG | - | chr4.1:17425576-17425595 | None:intergenic | 35.0% |
| !! | TCGTAGAATTCCTACTTTTG+AGG | + | chr4.1:17427083-17427102 | MS.gene08387:CDS | 35.0% |
| !! | TTTCTTAGTCTTGAAGTCCA+GGG | + | chr4.1:17426500-17426519 | MS.gene08387:intron | 35.0% |
| !!! | CATAAATGTTTTGGAGACCA+AGG | + | chr4.1:17424840-17424859 | MS.gene08387:intron | 35.0% |
| !!! | CTTTTTTTTTCCTTCTGCAG+TGG | + | chr4.1:17426265-17426284 | MS.gene08387:intron | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr4.1:17425065-17425084 | MS.gene08387:intron | 35.0% |
| !!! | TTTTCTTAGTCTTGAAGTCC+AGG | + | chr4.1:17426499-17426518 | MS.gene08387:intron | 35.0% |
| AACTCTTACAAATGGGTAGG+GGG | + | chr4.1:17425617-17425636 | MS.gene08387:intron | 40.0% | |
| AAGAAGCGATTGGTATATCC+TGG | + | chr4.1:17423215-17423234 | MS.gene08387:CDS | 40.0% | |
| AAGCTAGAGAAATTGGGTGA+AGG | - | chr4.1:17426583-17426602 | None:intergenic | 40.0% | |
| AAGGAGTTCTCTCTTGATAC+AGG | + | chr4.1:17426012-17426031 | MS.gene08387:intron | 40.0% | |
| ACAACTCAAGAGAAATCCCT+TGG | - | chr4.1:17424860-17424879 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr4.1:17425072-17425091 | None:intergenic | 40.0% | |
| ACATAGAATTTCCTGATGCC+GGG | - | chr4.1:17425697-17425716 | None:intergenic | 40.0% | |
| AGAAGCGATTGGTATATCCT+GGG | + | chr4.1:17423216-17423235 | MS.gene08387:CDS | 40.0% | |
| AGTAATAAGGAAGAAAGGCG+AGG | + | chr4.1:17424087-17424106 | MS.gene08387:CDS | 40.0% | |
| ATAACGCAAACAGGTTGTTC+TGG | - | chr4.1:17425837-17425856 | None:intergenic | 40.0% | |
| ATCTACTAGCATAAGCACCT+GGG | - | chr4.1:17423840-17423859 | None:intergenic | 40.0% | |
| ATGATGGTTGTAGGAATGAG+TGG | + | chr4.1:17425386-17425405 | MS.gene08387:intron | 40.0% | |
| ATGCCAAGGAGGTAATGATT+AGG | + | chr4.1:17423366-17423385 | MS.gene08387:CDS | 40.0% | |
| ATGTCCCACAATATCCAAAC+AGG | + | chr4.1:17425228-17425247 | MS.gene08387:intron | 40.0% | |
| CAACCTGTTTGCGTTATTAC+TGG | + | chr4.1:17425840-17425859 | MS.gene08387:CDS | 40.0% | |
| CAGCCAGTAATAAGGAAGAA+AGG | + | chr4.1:17424082-17424101 | MS.gene08387:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr4.1:17425071-17425090 | None:intergenic | 40.0% | |
| CATCAAGAAAGGCTCTTACT+TGG | - | chr4.1:17425874-17425893 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr4.1:17425040-17425059 | None:intergenic | 40.0% | |
| CTGTAAGAGCTATTGCATGA+GGG | + | chr4.1:17426755-17426774 | MS.gene08387:intron | 40.0% | |
| CTGTCCTGTTTGGATATTGT+GGG | - | chr4.1:17425235-17425254 | None:intergenic | 40.0% | |
| CTTCCTAATCATTACCTCCT+TGG | - | chr4.1:17423372-17423391 | None:intergenic | 40.0% | |
| GAGTACCCACAACTAAGTAA+GGG | + | chr4.1:17424966-17424985 | MS.gene08387:intron | 40.0% | |
| GCTCTCACAAATAATCTCAC+AGG | - | chr4.1:17423594-17423613 | None:intergenic | 40.0% | |
| GGAGAAGAAAATGTCACAAG+AGG | + | chr4.1:17424108-17424127 | MS.gene08387:CDS | 40.0% | |
| GGTAACTCTTACAAATGGGT+AGG | + | chr4.1:17425614-17425633 | MS.gene08387:intron | 40.0% | |
| GGTACAATGGCTATAGACAA+AGG | - | chr4.1:17425980-17425999 | None:intergenic | 40.0% | |
| GTGTATTTGTGCTCATCTAG+TGG | + | chr4.1:17423560-17423579 | MS.gene08387:intron | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | - | chr4.1:17425116-17425135 | None:intergenic | 40.0% | |
| TATCTACTAGCATAAGCACC+TGG | - | chr4.1:17423841-17423860 | None:intergenic | 40.0% | |
| TCGCCTTTCTTCCTTATTAC+TGG | - | chr4.1:17424088-17424107 | None:intergenic | 40.0% | |
| TGTAAGAGCTATTGCATGAG+GGG | + | chr4.1:17426756-17426775 | MS.gene08387:intron | 40.0% | |
| TGTAGGAATGAGTGGAGTAT+GGG | + | chr4.1:17425394-17425413 | MS.gene08387:intron | 40.0% | |
| TTAGATCAAACCACTGCAGA+AGG | - | chr4.1:17426278-17426297 | None:intergenic | 40.0% | |
| TTAGGTTTAGGAAAGGAGGA+TGG | + | chr4.1:17424906-17424925 | MS.gene08387:intron | 40.0% | |
| TTGTAGGAATGAGTGGAGTA+TGG | + | chr4.1:17425393-17425412 | MS.gene08387:intron | 40.0% | |
| ! | AATTTAAAGTACCCGGCATC+AGG | + | chr4.1:17425683-17425702 | MS.gene08387:intron | 40.0% |
| ! | ACACTTAGTTGTGGGTATTG+AGG | - | chr4.1:17425163-17425182 | None:intergenic | 40.0% |
| ! | AGAGTACCCACAACTAAGTA+AGG | + | chr4.1:17424965-17424984 | MS.gene08387:intron | 40.0% |
| ! | CATATTATGAAGGCATGTGG+TGG | - | chr4.1:17425573-17425592 | None:intergenic | 40.0% |
| ! | GGGAGTTGGTTAATGATAGT+AGG | + | chr4.1:17426806-17426825 | MS.gene08387:intron | 40.0% |
| ! | GTCGATCTCTTTTTCTTGGT+TGG | - | chr4.1:17427015-17427034 | None:intergenic | 40.0% |
| ! | GTTTTGTGGCTGTTCTTCAT+CGG | - | chr4.1:17423174-17423193 | None:intergenic | 40.0% |
| ! | TTTTGTGGCTGTTCTTCATC+GGG | - | chr4.1:17423173-17423192 | None:intergenic | 40.0% |
| !! | AAAAGCATTCATGTGGGAGT+TGG | + | chr4.1:17426792-17426811 | MS.gene08387:intron | 40.0% |
| !! | ACTTAGTTGTGGGTATTGAG+GGG | - | chr4.1:17425161-17425180 | None:intergenic | 40.0% |
| !! | CACTTAGTTGTGGGTATTGA+GGG | - | chr4.1:17425162-17425181 | None:intergenic | 40.0% |
| !! | CTTTTAGAAGCTGCTCAAAC+AGG | + | chr4.1:17424136-17424155 | MS.gene08387:CDS | 40.0% |
| !! | GACCATAATCAGGTGTTGTT+TGG | - | chr4.1:17424032-17424051 | None:intergenic | 40.0% |
| !! | GGGATTATTTTGCAGCATTC+TGG | + | chr4.1:17426918-17426937 | MS.gene08387:intron | 40.0% |
| !!! | TCTAGCTTTTCAGAGAGAGA+TGG | + | chr4.1:17426595-17426614 | MS.gene08387:intron | 40.0% |
| !!! | TTTTGGCTCAGCCAGTAATA+AGG | + | chr4.1:17424074-17424093 | MS.gene08387:intron | 40.0% |
| AAGAAAGGCTCTTACTTGGC+AGG | - | chr4.1:17425870-17425889 | None:intergenic | 45.0% | |
| AATTCTACGAAACCGAGCCA+AGG | - | chr4.1:17427073-17427092 | None:intergenic | 45.0% | |
| ACAACTAAGTAAGGGCAACC+CGG | + | chr4.1:17424974-17424993 | MS.gene08387:intron | 45.0% | |
| ACATTCCAAAGGAAGGACCT+TGG | + | chr4.1:17424739-17424758 | MS.gene08387:intron | 45.0% | |
| ACTGGACACATTCCAAAGGA+AGG | + | chr4.1:17424732-17424751 | MS.gene08387:intron | 45.0% | |
| AGCTCTCAAAGCAACCTACA+AGG | + | chr4.1:17423445-17423464 | MS.gene08387:CDS | 45.0% | |
| CCACAATATCCAAACAGGAC+AGG | + | chr4.1:17425233-17425252 | MS.gene08387:intron | 45.0% | |
| CCTGTCCTGTTTGGATATTG+TGG | - | chr4.1:17425236-17425255 | None:intergenic | 45.0% | |
| CTACTTCAACCTGTCCTGTT+TGG | - | chr4.1:17425245-17425264 | None:intergenic | 45.0% | |
| CTGAAACAAAGCCTCTACCA+AGG | - | chr4.1:17424759-17424778 | None:intergenic | 45.0% | |
| GAAATCGGAGTCGAATTCGT+CGG | - | chr4.1:17423041-17423060 | None:intergenic | 45.0% | |
| GAATGGCTTCTCTTTCAGCT+TGG | - | chr4.1:17423421-17423440 | None:intergenic | 45.0% | |
| GAGATCGAATCTTCTACTCC+TGG | + | chr4.1:17422874-17422893 | MS.gene08387:CDS | 45.0% | |
| GATGCTCAACTTGCGTCATT+TGG | + | chr4.1:17426456-17426475 | MS.gene08387:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr4.1:17425041-17425060 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr4.1:17425044-17425063 | None:intergenic | 45.0% | |
| GCTGTAAGAGCTATTGCATG+AGG | + | chr4.1:17426754-17426773 | MS.gene08387:intron | 45.0% | |
| GGTTGCCCTTACTTAGTTGT+GGG | - | chr4.1:17424974-17424993 | None:intergenic | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | - | chr4.1:17425110-17425129 | None:intergenic | 45.0% | |
| TACAGCTTGACGTGTAGAGT+TGG | - | chr4.1:17426740-17426759 | None:intergenic | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | - | chr4.1:17425109-17425128 | None:intergenic | 45.0% | |
| TCCAACAATAGTATGTGCCC+TGG | - | chr4.1:17426520-17426539 | None:intergenic | 45.0% | |
| TCCAGGGCACATACTATTGT+TGG | + | chr4.1:17426516-17426535 | MS.gene08387:intron | 45.0% | |
| TGAGGTTGAAGATGGCATGT+TGG | + | chr4.1:17425593-17425612 | MS.gene08387:intron | 45.0% | |
| TTCAGCTTGGCGAACAATGA+CGG | - | chr4.1:17423408-17423427 | None:intergenic | 45.0% | |
| ! | AACATCATGGTGGGGAAAAC+TGG | - | chr4.1:17426326-17426345 | None:intergenic | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr4.1:17425757-17425776 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr4.1:17425758-17425777 | None:intergenic | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr4.1:17425076-17425095 | MS.gene08387:intron | 45.0% |
| !! | AGATGAATTGTTCTGGGGTC+AGG | + | chr4.1:17422961-17422980 | MS.gene08387:CDS | 45.0% |
| !! | GGTAGAGGCTTTGTTTCAGA+TGG | + | chr4.1:17424760-17424779 | MS.gene08387:intron | 45.0% |
| !! | GAATTAATTAATTAATTAAT+CGG | - | chr4.1:17423101-17423120 | None:intergenic | 5.0% |
| ACATCCACATGATCGGTCCT+TGG | + | chr4.1:17427053-17427072 | MS.gene08387:CDS | 50.0% | |
| ATATCCTGGGAAGGCGACAT+TGG | + | chr4.1:17423229-17423248 | MS.gene08387:CDS | 50.0% | |
| CAAAGGAAGGACCTTGGTAG+AGG | + | chr4.1:17424745-17424764 | MS.gene08387:intron | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr4.1:17425132-17425151 | MS.gene08387:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr4.1:17425756-17425775 | MS.gene08387:intron | 50.0% | |
| CGCACATTCTTGAGACGTTG+TGG | - | chr4.1:17424525-17424544 | None:intergenic | 50.0% | |
| CTCTACCAAGGTCCTTCCTT+TGG | - | chr4.1:17424747-17424766 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr4.1:17425753-17425772 | None:intergenic | 50.0% | |
| GCGATTGGTATATCCTGGGA+AGG | + | chr4.1:17423220-17423239 | MS.gene08387:CDS | 50.0% | |
| GGGTTGCCCTTACTTAGTTG+TGG | - | chr4.1:17424975-17424994 | None:intergenic | 50.0% | |
| GGTACCGTGATCCAAAGACT+GGG | + | chr4.1:17426033-17426052 | MS.gene08387:intron | 50.0% | |
| GTCGAATTCGTCGGCGATTT+CGG | - | chr4.1:17423032-17423051 | None:intergenic | 50.0% | |
| GTGGGCATACTGAGATGGAT+AGG | + | chr4.1:17425421-17425440 | MS.gene08387:intron | 50.0% | |
| TATAGCCGACCCCACTTAGT+GGG | + | chr4.1:17425745-17425764 | MS.gene08387:intron | 50.0% | |
| TTATAGCCGACCCCACTTAG+TGG | + | chr4.1:17425744-17425763 | MS.gene08387:intron | 50.0% | |
| ! | AGGTACCGTGATCCAAAGAC+TGG | + | chr4.1:17426032-17426051 | MS.gene08387:intron | 50.0% |
| ! | ATTGGGTGAAGGCACATGCA+TGG | - | chr4.1:17426572-17426591 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr4.1:17425759-17425778 | None:intergenic | 50.0% |
| ! | GCGAACAATGACGGAAGTTC+TGG | - | chr4.1:17423399-17423418 | None:intergenic | 50.0% |
| !! | TGCTTTGAGAGCTTCGCGAA+TGG | - | chr4.1:17423438-17423457 | None:intergenic | 50.0% |
| !! | TGGGTATTGAGGGGTAACCT+TGG | - | chr4.1:17425152-17425171 | None:intergenic | 50.0% |
| !!! | GGAGCGAGTTTTAGCTAGAG+AGG | + | chr4.1:17424289-17424308 | MS.gene08387:CDS | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr4.1:17425097-17425116 | None:intergenic | 55.0% | |
| CAACCAGGACGATGATGCCA+AGG | + | chr4.1:17423352-17423371 | MS.gene08387:CDS | 55.0% | |
| CACATGATCGGTCCTTGGCT+CGG | + | chr4.1:17427058-17427077 | MS.gene08387:CDS | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr4.1:17425751-17425770 | MS.gene08387:intron | 55.0% | |
| CGGCGATTTCGGCTTCTTCT+TGG | - | chr4.1:17423021-17423040 | None:intergenic | 55.0% | |
| GACGAGTGGGCATACTGAGA+TGG | + | chr4.1:17425416-17425435 | MS.gene08387:intron | 55.0% | |
| GAGTGGAGTATGGGACGAGT+GGG | + | chr4.1:17425403-17425422 | MS.gene08387:intron | 55.0% | |
| GCAGCCCAGTCTTTGGATCA+CGG | - | chr4.1:17426040-17426059 | None:intergenic | 55.0% | |
| GGCTGTTCTTCATCGGGTTC+AGG | - | chr4.1:17423167-17423186 | None:intergenic | 55.0% | |
| GGTCTGCAGTCATCCTCCTA+TGG | - | chr4.1:17426305-17426324 | None:intergenic | 55.0% | |
| TGAGTGGAGTATGGGACGAG+TGG | + | chr4.1:17425402-17425421 | MS.gene08387:intron | 55.0% | |
| TTAGCCAATGTCGCCTTCCC+AGG | - | chr4.1:17423236-17423255 | None:intergenic | 55.0% | |
| ACTGAAGCTCCCGCATACGC+AGG | + | chr4.1:17425000-17425019 | MS.gene08387:intron | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr4.1:17425143-17425162 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr4.1:17424996-17425015 | None:intergenic | 60.0% | |
| CATACGCAGGGTCGAGGAAG+GGG | + | chr4.1:17425013-17425032 | MS.gene08387:intron | 60.0% | |
| CCAGGACGATGATGCCAAGG+AGG | + | chr4.1:17423355-17423374 | MS.gene08387:CDS | 60.0% | |
| CCTCCTTGGCATCATCGTCC+TGG | - | chr4.1:17423358-17423377 | None:intergenic | 60.0% | |
| CGAGCCAAGGACCGATCATG+TGG | - | chr4.1:17427060-17427079 | None:intergenic | 60.0% | |
| CGTGCATCTCGAGCGACAAG+AGG | + | chr4.1:17422899-17422918 | MS.gene08387:CDS | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | + | chr4.1:17425001-17425020 | MS.gene08387:intron | 60.0% | |
| CTTCCTCGACCCTGCGTATG+CGG | - | chr4.1:17425013-17425032 | None:intergenic | 60.0% | |
| GAGGAAGGGGTCCCACCATT+TGG | + | chr4.1:17425026-17425045 | MS.gene08387:intron | 60.0% | |
| GCATACGCAGGGTCGAGGAA+GGG | + | chr4.1:17425012-17425031 | MS.gene08387:intron | 60.0% | |
| GCGTATGGCAGCCCAGTCTT+TGG | - | chr4.1:17426047-17426066 | None:intergenic | 60.0% | |
| TCGCTCGAGATGCACGATCC+AGG | - | chr4.1:17422895-17422914 | None:intergenic | 60.0% | |
| TTCCTCGACCCTGCGTATGC+GGG | - | chr4.1:17425012-17425031 | None:intergenic | 60.0% | |
| CGCATACGCAGGGTCGAGGA+AGG | + | chr4.1:17425011-17425030 | MS.gene08387:intron | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr4.1:17424995-17425014 | None:intergenic | 65.0% | |
| CTCCCGCATACGCAGGGTCG+AGG | + | chr4.1:17425007-17425026 | MS.gene08387:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 17422845 | 17427122 | 17422845 | ID=MS.gene08387 |
| chr4.1 | mRNA | 17422845 | 17427122 | 17422845 | ID=MS.gene08387.t1;Parent=MS.gene08387 |
| chr4.1 | exon | 17422845 | 17423069 | 17422845 | ID=MS.gene08387.t1.exon1;Parent=MS.gene08387.t1 |
| chr4.1 | CDS | 17422845 | 17423069 | 17422845 | ID=cds.MS.gene08387.t1;Parent=MS.gene08387.t1 |
| chr4.1 | exon | 17423161 | 17423466 | 17423161 | ID=MS.gene08387.t1.exon2;Parent=MS.gene08387.t1 |
| chr4.1 | CDS | 17423161 | 17423466 | 17423161 | ID=cds.MS.gene08387.t1;Parent=MS.gene08387.t1 |
| chr4.1 | exon | 17424085 | 17424157 | 17424085 | ID=MS.gene08387.t1.exon3;Parent=MS.gene08387.t1 |
| chr4.1 | CDS | 17424085 | 17424157 | 17424085 | ID=cds.MS.gene08387.t1;Parent=MS.gene08387.t1 |
| chr4.1 | exon | 17424267 | 17424386 | 17424267 | ID=MS.gene08387.t1.exon4;Parent=MS.gene08387.t1 |
| chr4.1 | CDS | 17424267 | 17424386 | 17424267 | ID=cds.MS.gene08387.t1;Parent=MS.gene08387.t1 |
| chr4.1 | exon | 17424471 | 17424539 | 17424471 | ID=MS.gene08387.t1.exon5;Parent=MS.gene08387.t1 |
| chr4.1 | CDS | 17424471 | 17424539 | 17424471 | ID=cds.MS.gene08387.t1;Parent=MS.gene08387.t1 |
| chr4.1 | exon | 17425832 | 17425874 | 17425832 | ID=MS.gene08387.t1.exon6;Parent=MS.gene08387.t1 |
| chr4.1 | CDS | 17425832 | 17425874 | 17425832 | ID=cds.MS.gene08387.t1;Parent=MS.gene08387.t1 |
| chr4.1 | exon | 17426034 | 17426099 | 17426034 | ID=MS.gene08387.t1.exon7;Parent=MS.gene08387.t1 |
| chr4.1 | CDS | 17426034 | 17426099 | 17426034 | ID=cds.MS.gene08387.t1;Parent=MS.gene08387.t1 |
| chr4.1 | exon | 17426933 | 17427122 | 17426933 | ID=MS.gene08387.t1.exon8;Parent=MS.gene08387.t1 |
| chr4.1 | CDS | 17426933 | 17427122 | 17426933 | ID=cds.MS.gene08387.t1;Parent=MS.gene08387.t1 |
| Gene Sequence |
| Protein sequence |
