AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08631


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08631.t1 MTR_4g059370 92.879 323 23 0 51 373 68 390 0.0 621
MS.gene08631.t1 MTR_1g090270 67.287 376 117 2 3 373 89 463 0.0 531
MS.gene08631.t1 MTR_1g090280 79.235 183 38 0 191 373 131 313 2.36e-104 310
MS.gene08631.t1 MTR_2g014900 41.979 374 204 7 5 373 89 454 5.98e-104 314
MS.gene08631.t1 MTR_4g079270 41.867 375 202 8 5 372 90 455 1.47e-98 300
MS.gene08631.t1 MTR_2g083380 43.048 374 199 7 5 372 107 472 8.27e-95 291
MS.gene08631.t1 MTR_4g079250 40.000 375 209 8 5 372 90 455 3.39e-94 289
MS.gene08631.t1 MTR_2g083490 42.553 376 198 8 5 372 90 455 1.06e-92 285
MS.gene08631.t1 MTR_2g083480 39.410 373 212 8 5 371 90 454 5.82e-85 265
MS.gene08631.t1 MTR_2g083430 39.788 377 209 9 5 373 90 456 8.21e-85 265
MS.gene08631.t1 MTR_2g083420 36.675 379 198 9 1 371 86 430 9.72e-84 261
MS.gene08631.t1 MTR_2g083390 36.605 377 201 8 1 371 86 430 2.10e-81 255
MS.gene08631.t1 MTR_8g068330 31.070 383 247 9 1 373 87 462 7.83e-56 190
MS.gene08631.t1 MTR_8g068360 31.842 380 239 11 5 373 95 465 1.88e-53 184
MS.gene08631.t1 MTR_2g008226 31.593 383 232 10 8 373 99 468 2.18e-53 183
MS.gene08631.t1 MTR_4g123553 30.233 387 234 9 1 372 93 458 6.83e-53 182
MS.gene08631.t1 MTR_2g008220 32.637 383 224 11 5 371 97 461 2.74e-52 181
MS.gene08631.t1 MTR_2g008225 33.598 378 221 14 8 371 101 462 3.54e-51 177
MS.gene08631.t1 MTR_2g086283 37.455 275 114 5 101 372 114 333 1.58e-50 172
MS.gene08631.t1 MTR_4g077960 32.051 390 223 13 1 372 70 435 6.47e-50 174
MS.gene08631.t1 MTR_2g046620 32.124 386 224 12 3 372 96 459 1.33e-49 173
MS.gene08631.t1 MTR_6g036650 32.658 395 220 14 1 372 97 468 6.53e-49 172
MS.gene08631.t1 MTR_8g068340 29.708 377 250 6 5 372 95 465 4.59e-48 169
MS.gene08631.t1 MTR_6g042310 30.469 384 237 9 1 372 96 461 1.02e-47 168
MS.gene08631.t1 MTR_7g067330 30.053 376 206 11 5 368 92 422 1.44e-47 167
MS.gene08631.t1 MTR_2g083360 28.302 371 159 8 1 371 107 370 1.58e-45 160
MS.gene08631.t1 MTR_8g007565 33.333 357 213 9 5 345 92 439 1.58e-43 157
MS.gene08631.t1 MTR_8g007650 33.333 357 213 9 5 345 92 439 3.28e-43 156
MS.gene08631.t1 MTR_5g066410 32.873 362 200 9 5 352 83 415 2.56e-42 153
MS.gene08631.t1 MTR_7g067120 28.800 375 212 12 5 368 92 422 1.56e-41 151
MS.gene08631.t1 MTR_8g006710 28.177 362 226 9 7 345 89 439 4.38e-34 131
MS.gene08631.t1 MTR_7g117170 27.907 387 248 11 4 371 97 471 2.13e-33 130
MS.gene08631.t1 MTR_2g098430 29.810 369 233 12 5 354 91 452 2.97e-33 129
MS.gene08631.t1 MTR_8g009073 32.685 257 157 6 127 371 79 331 3.60e-33 126
MS.gene08631.t1 MTR_8g006730 26.554 354 242 8 7 345 90 440 6.42e-33 128
MS.gene08631.t1 MTR_6g033725 33.891 239 135 7 130 351 205 437 6.54e-33 128
MS.gene08631.t1 MTR_3g435310 28.954 373 209 12 3 372 98 417 9.41e-33 127
MS.gene08631.t1 MTR_6g488280 38.462 169 97 1 171 332 256 424 1.78e-32 127
MS.gene08631.t1 MTR_0428s0010 38.462 169 97 1 171 332 256 424 1.78e-32 127
MS.gene08631.t1 MTR_8g009067 35.096 208 124 3 171 371 139 342 1.97e-32 125
MS.gene08631.t1 MTR_8g009073 34.034 238 141 6 127 352 208 441 2.27e-32 127
MS.gene08631.t1 MTR_4g485630 28.238 386 243 12 12 373 100 475 4.50e-32 126
MS.gene08631.t1 MTR_0184s0040 36.082 194 113 3 167 353 269 458 7.66e-32 125
MS.gene08631.t1 MTR_0078s0190 36.082 194 113 3 167 353 269 458 7.66e-32 125
MS.gene08631.t1 MTR_8g009067 35.096 208 124 3 171 371 257 460 8.03e-32 125
MS.gene08631.t1 MTR_6g033625 30.657 274 164 8 111 369 194 456 1.53e-31 124
MS.gene08631.t1 MTR_6g033615 34.483 203 126 4 167 369 247 442 2.00e-31 124
MS.gene08631.t1 MTR_6g023665 26.686 341 228 6 7 332 98 431 2.30e-31 124
MS.gene08631.t1 MTR_0184s0030 35.052 194 114 3 171 356 259 448 3.63e-31 123
MS.gene08631.t1 MTR_8g027885 27.907 387 250 11 1 371 95 468 3.64e-31 123
MS.gene08631.t1 MTR_6g033660 34.874 238 134 6 130 351 207 439 3.83e-31 123
MS.gene08631.t1 MTR_8g027870 27.390 387 252 10 1 371 95 468 6.86e-31 122
MS.gene08631.t1 MTR_5g027210 30.328 244 140 4 118 332 204 446 7.97e-31 122
MS.gene08631.t1 MTR_1g019520 34.450 209 125 4 171 371 4 208 1.15e-30 117
MS.gene08631.t1 MTR_6g033675 38.122 181 107 4 171 351 265 440 1.62e-30 122
MS.gene08631.t1 MTR_8g009050 30.796 289 173 8 97 371 187 462 2.35e-30 121
MS.gene08631.t1 MTR_8g012650 37.968 187 103 3 171 345 260 445 2.75e-30 121
MS.gene08631.t1 MTR_4g485620 26.873 387 235 14 1 360 73 438 2.94e-30 120
MS.gene08631.t1 MTR_0078s0060 35.052 194 115 3 167 353 253 442 4.41e-30 120
MS.gene08631.t1 MTR_3g009510 32.653 196 119 2 171 356 265 457 7.16e-30 120
MS.gene08631.t1 MTR_8g012630 34.375 224 119 4 149 345 167 389 7.33e-30 119
MS.gene08631.t1 MTR_8g008970 34.135 208 126 3 171 371 257 460 1.11e-29 121
MS.gene08631.t1 MTR_8g008970 28.856 201 131 3 171 371 596 784 1.31e-20 94.0
MS.gene08631.t1 MTR_8g009055 33.810 210 126 4 171 371 257 462 1.11e-29 119
MS.gene08631.t1 MTR_0078s0010 36.788 193 111 3 167 352 254 442 1.32e-29 119
MS.gene08631.t1 MTR_8g006260 30.699 329 191 11 41 345 128 443 2.70e-29 118
MS.gene08631.t1 MTR_1g019510 35.789 190 110 4 171 352 255 440 3.74e-29 117
MS.gene08631.t1 MTR_5g045970 26.685 371 234 10 3 344 102 463 4.44e-29 118
MS.gene08631.t1 MTR_7g013200 27.701 361 229 11 5 361 93 425 6.48e-29 117
MS.gene08631.t1 MTR_7g013220 33.508 191 112 6 171 361 261 436 6.76e-29 117
MS.gene08631.t1 MTR_8g012635 36.364 187 106 3 171 345 260 445 7.49e-29 117
MS.gene08631.t1 MTR_8g008990 27.778 396 245 13 1 371 85 464 7.87e-29 117
MS.gene08631.t1 MTR_7g047030 36.269 193 112 3 167 352 254 442 1.03e-28 116
MS.gene08631.t1 MTR_7g047270 36.269 193 112 3 167 352 254 442 1.03e-28 116
MS.gene08631.t1 MTR_8g071070 26.098 387 254 13 6 372 95 469 1.05e-28 116
MS.gene08631.t1 MTR_8g066610 27.492 331 199 9 8 313 100 414 1.27e-28 116
MS.gene08631.t1 MTR_1g062380 33.333 243 133 6 127 344 226 464 2.30e-28 115
MS.gene08631.t1 MTR_8g012730 36.757 185 104 3 173 345 99 282 2.33e-28 113
MS.gene08631.t1 MTR_8g077590 32.353 238 149 4 119 345 204 440 4.00e-28 115
MS.gene08631.t1 MTR_0009s0240 34.896 192 121 3 123 310 208 399 5.93e-28 114
MS.gene08631.t1 MTR_6g005600 33.333 213 128 3 169 371 255 463 7.02e-28 114
MS.gene08631.t1 MTR_8g006270 32.086 187 118 1 167 344 250 436 7.54e-28 114
MS.gene08631.t1 MTR_8g465670 25.824 364 248 8 4 351 89 446 9.85e-28 114
MS.gene08631.t1 MTR_5g019580 33.333 225 127 6 150 358 241 458 1.40e-27 113
MS.gene08631.t1 MTR_2g059240 27.327 333 201 11 2 310 94 409 1.47e-27 113
MS.gene08631.t1 MTR_8g074550 25.964 389 233 15 1 351 88 459 1.67e-27 113
MS.gene08631.t1 MTR_5g019580 33.333 225 127 6 150 358 265 482 1.73e-27 113
MS.gene08631.t1 MTR_8g006220 26.042 384 230 9 4 351 88 453 1.96e-27 113
MS.gene08631.t1 MTR_5g035560 26.359 368 222 10 28 371 109 451 2.88e-27 112
MS.gene08631.t1 MTR_7g046490 31.878 229 139 7 134 349 215 439 5.48e-27 111
MS.gene08631.t1 MTR_6g038230 28.035 346 205 11 25 351 110 430 7.62e-27 111
MS.gene08631.t1 MTR_8g009063 33.333 210 127 3 171 371 264 469 2.02e-26 110
MS.gene08631.t1 MTR_3g069710 31.010 287 164 12 87 352 155 428 4.67e-26 108
MS.gene08631.t1 MTR_4g031800 29.297 256 152 7 122 353 202 452 4.88e-26 109
MS.gene08631.t1 MTR_6g038220 28.490 351 203 14 22 351 106 429 5.28e-26 108
MS.gene08631.t1 MTR_7g102490 37.634 186 102 5 171 345 278 460 5.46e-26 109
MS.gene08631.t1 MTR_6g038200 27.324 355 206 13 25 356 110 435 7.20e-26 108
MS.gene08631.t1 MTR_7g102550 30.029 343 206 9 25 349 119 445 1.05e-25 108
MS.gene08631.t1 MTR_7g070660 27.078 373 226 11 1 344 95 450 1.81e-25 107
MS.gene08631.t1 MTR_5g035580 34.031 191 113 5 166 356 257 434 2.33e-25 107
MS.gene08631.t1 MTR_7g070740 25.464 377 231 11 1 344 95 454 2.43e-25 107
MS.gene08631.t1 MTR_7g117405 27.882 373 231 12 1 348 96 455 2.54e-25 107
MS.gene08631.t1 MTR_6g038240 35.870 184 104 5 168 351 261 430 2.59e-25 107
MS.gene08631.t1 MTR_4g024020 36.126 191 107 5 167 345 274 461 2.99e-25 107
MS.gene08631.t1 MTR_7g102460 36.559 186 104 5 171 345 276 458 2.99e-25 107
MS.gene08631.t1 MTR_6g038300 34.946 186 108 6 168 353 261 433 4.06e-25 106
MS.gene08631.t1 MTR_5g098960 35.385 195 102 7 171 362 260 433 1.11e-24 105
MS.gene08631.t1 MTR_7g013180 33.990 203 114 6 167 364 254 441 1.57e-24 104
MS.gene08631.t1 MTR_3g009490 31.176 170 104 2 197 356 3 169 2.81e-24 99.0
MS.gene08631.t1 MTR_2g046750 25.620 363 234 12 28 371 120 465 2.94e-24 103
MS.gene08631.t1 MTR_4g117960 28.144 334 203 13 25 332 117 439 2.96e-24 103
MS.gene08631.t1 MTR_4g128690 34.872 195 111 4 167 361 260 438 3.15e-24 103
MS.gene08631.t1 MTR_7g055710 25.532 376 232 9 1 344 95 454 3.32e-24 103
MS.gene08631.t1 MTR_8g012745 29.630 243 154 5 119 346 202 442 4.40e-24 103
MS.gene08631.t1 MTR_4g485640 24.786 351 229 8 16 342 297 636 5.55e-24 103
MS.gene08631.t1 MTR_3g049970 27.068 266 168 7 105 352 189 446 5.75e-24 103
MS.gene08631.t1 MTR_7g070800 26.984 378 225 13 1 345 90 449 8.64e-24 102
MS.gene08631.t1 MTR_8g466240 26.748 329 201 9 13 314 84 399 9.05e-24 102
MS.gene08631.t1 MTR_5g045960 27.394 376 235 13 10 357 106 471 1.06e-23 102
MS.gene08631.t1 MTR_5g087620 26.124 356 232 10 25 357 128 475 1.07e-23 102
MS.gene08631.t1 MTR_7g102520 33.690 187 111 3 168 344 276 459 1.41e-23 102
MS.gene08631.t1 MTR_2g035040 26.062 353 218 9 28 353 25 361 1.64e-23 100
MS.gene08631.t1 MTR_1g107315 28.000 300 172 11 36 311 127 406 2.90e-23 101
MS.gene08631.t1 MTR_7g013240 32.432 185 110 6 171 355 250 419 3.00e-23 100
MS.gene08631.t1 MTR_5g040030 26.879 346 205 10 19 332 117 446 3.51e-23 101
MS.gene08631.t1 MTR_4g485590 30.542 203 125 3 127 318 192 389 3.74e-23 100
MS.gene08631.t1 MTR_7g080950 33.155 187 111 3 167 353 253 425 3.91e-23 100
MS.gene08631.t1 MTR_8g056740 23.913 276 184 6 84 347 75 336 3.96e-23 100
MS.gene08631.t1 MTR_7g070610 25.606 371 239 8 1 344 97 457 5.08e-23 100
MS.gene08631.t1 MTR_4g128720 33.846 195 113 4 167 361 263 441 5.49e-23 100
MS.gene08631.t1 MTR_7g102450 30.738 244 145 7 127 348 205 446 6.09e-23 100
MS.gene08631.t1 MTR_4g117980 24.814 403 255 11 3 372 95 482 6.76e-23 100
MS.gene08631.t1 MTR_0536s0020 36.552 145 88 2 171 311 265 409 6.82e-23 100
MS.gene08631.t1 MTR_1g032490 27.707 314 182 12 36 324 129 422 7.34e-23 100
MS.gene08631.t1 MTR_1g107350 26.331 338 209 12 36 352 127 445 8.75e-23 99.8
MS.gene08631.t1 MTR_0536s0010 24.685 397 250 11 5 372 101 477 1.03e-22 99.8
MS.gene08631.t1 MTR_5g090700 28.716 296 182 7 101 368 179 473 1.16e-22 99.4
MS.gene08631.t1 MTR_0891s0010 27.016 248 155 6 119 352 31 266 1.35e-22 96.7
MS.gene08631.t1 MTR_5g072830 24.713 348 217 12 21 351 105 424 2.32e-22 98.2
MS.gene08631.t1 MTR_1g107365 32.044 181 107 4 171 351 303 467 2.43e-22 98.6
MS.gene08631.t1 MTR_5g072840 25.872 344 218 11 21 351 105 424 2.86e-22 98.2
MS.gene08631.t1 MTR_8g064880 25.970 335 212 12 36 349 130 449 3.07e-22 98.2
MS.gene08631.t1 MTR_2g040530 24.084 382 254 12 10 371 99 464 3.37e-22 97.8
MS.gene08631.t1 MTR_7g013260 33.735 166 101 5 171 336 251 407 3.50e-22 97.8
MS.gene08631.t1 MTR_7g070810 26.146 371 230 10 1 344 93 446 3.91e-22 97.8
MS.gene08631.t1 MTR_7g012120 31.088 193 122 3 167 348 266 458 4.22e-22 97.8
MS.gene08631.t1 MTR_2g034990 34.239 184 110 4 171 343 268 451 5.92e-22 97.4
MS.gene08631.t1 MTR_4g008630 34.392 189 109 4 171 351 257 438 6.71e-22 97.1
MS.gene08631.t1 MTR_5g072820 28.916 249 146 7 116 351 194 424 7.82e-22 96.7
MS.gene08631.t1 MTR_7g070940 24.586 362 248 8 1 345 93 446 8.63e-22 97.1
MS.gene08631.t1 MTR_3g479610 26.877 253 155 7 120 356 55 293 1.27e-21 94.7
MS.gene08631.t1 MTR_5g016660 25.967 362 227 10 12 344 105 454 1.34e-21 96.3
MS.gene08631.t1 MTR_6g035265 30.460 174 109 3 171 332 259 432 1.48e-21 96.3
MS.gene08631.t1 MTR_7g070860 26.016 369 222 12 1 344 91 433 1.69e-21 95.9
MS.gene08631.t1 MTR_3g479520 27.419 248 154 6 119 352 224 459 1.84e-21 95.9
MS.gene08631.t1 MTR_4g095008 30.374 214 133 6 167 370 260 467 1.99e-21 96.3
MS.gene08631.t1 MTR_5g090610 26.316 285 186 9 109 372 180 461 2.01e-21 95.9
MS.gene08631.t1 MTR_3g079480 26.693 251 158 6 120 356 231 469 2.32e-21 95.9
MS.gene08631.t1 MTR_5g090580 25.725 276 182 7 114 368 198 471 3.06e-21 95.1
MS.gene08631.t1 MTR_3g479490 30.939 181 113 5 172 352 282 450 3.50e-21 95.1
MS.gene08631.t1 MTR_1g040310 22.871 411 261 7 5 369 102 502 3.63e-21 95.1
MS.gene08631.t1 MTR_5g098930 27.407 270 165 7 113 356 188 452 4.22e-21 94.7
MS.gene08631.t1 MTR_8g083280 30.556 252 150 8 111 351 200 437 4.93e-21 94.7
MS.gene08631.t1 MTR_7g102560 34.054 185 109 4 168 342 270 451 6.18e-21 94.4
MS.gene08631.t1 MTR_2g035020 33.333 201 117 5 171 360 268 462 6.57e-21 94.4
MS.gene08631.t1 MTR_4g117950 35.616 146 90 2 168 311 249 392 6.79e-21 94.4
MS.gene08631.t1 MTR_5g004940 33.333 183 113 4 117 293 137 316 6.91e-21 93.6
MS.gene08631.t1 MTR_4g094920 32.934 167 109 3 167 332 275 439 9.54e-21 94.0
MS.gene08631.t1 MTR_4g117890 35.135 148 92 2 171 314 260 407 1.02e-20 93.6
MS.gene08631.t1 MTR_5g464760 30.729 192 115 5 167 356 284 459 1.32e-20 93.6
MS.gene08631.t1 MTR_7g080940 32.609 184 110 4 168 351 259 428 1.40e-20 93.2
MS.gene08631.t1 MTR_6g013440 28.235 255 150 9 114 352 220 457 1.47e-20 93.2
MS.gene08631.t1 MTR_5g090620 27.174 276 161 7 100 356 206 460 1.77e-20 93.2
MS.gene08631.t1 MTR_8g088560 24.501 351 217 10 28 356 114 438 2.03e-20 92.8
MS.gene08631.t1 MTR_5g090670 26.316 285 180 9 109 368 194 473 2.19e-20 92.8
MS.gene08631.t1 MTR_7g080935 33.514 185 107 5 168 351 259 428 2.37e-20 92.4
MS.gene08631.t1 MTR_2g046820 27.306 271 173 7 119 371 198 462 2.50e-20 92.4
MS.gene08631.t1 MTR_8g090095 29.020 255 162 7 112 355 213 459 2.52e-20 92.4
MS.gene08631.t1 MTR_1g107360 24.498 249 165 4 118 356 207 442 2.79e-20 92.4
MS.gene08631.t1 MTR_1g029540 32.984 191 115 3 171 354 254 438 2.97e-20 92.4
MS.gene08631.t1 MTR_1g107380 28.514 249 153 9 116 351 212 448 3.95e-20 92.0
MS.gene08631.t1 MTR_5g016480 29.717 212 132 7 166 368 268 471 4.64e-20 91.7
MS.gene08631.t1 MTR_5g464810 29.412 187 118 5 167 353 282 454 6.33e-20 91.3
MS.gene08631.t1 MTR_5g064240 29.412 187 118 5 167 353 282 454 6.33e-20 91.3
MS.gene08631.t1 MTR_8g064870 25.403 248 168 5 118 352 207 450 7.61e-20 91.3
MS.gene08631.t1 MTR_5g072810 24.646 353 215 13 21 351 106 429 8.23e-20 90.9
MS.gene08631.t1 MTR_8g083290 31.795 195 118 5 160 353 261 441 9.04e-20 90.9
MS.gene08631.t1 MTR_5g090660 28.774 212 136 5 171 368 259 469 9.28e-20 91.3
MS.gene08631.t1 MTR_2g008210 33.146 178 111 4 167 344 278 447 1.04e-19 90.9
MS.gene08631.t1 MTR_8g044140 25.852 352 229 8 5 332 64 407 1.16e-19 90.5
MS.gene08631.t1 MTR_3g069690 26.962 293 171 12 87 352 150 426 1.88e-19 89.7
MS.gene08631.t1 MTR_4g108250 27.628 333 212 9 1 314 98 420 1.90e-19 90.1
MS.gene08631.t1 MTR_8g032950 34.375 192 112 6 168 345 263 454 2.68e-19 89.7
MS.gene08631.t1 MTR_4g082810 37.121 132 80 2 171 300 265 395 2.82e-19 89.0
MS.gene08631.t1 MTR_6g035185 25.594 379 239 12 25 372 117 483 3.11e-19 89.4
MS.gene08631.t1 MTR_5g075440 24.339 378 234 9 20 368 102 456 3.27e-19 89.0
MS.gene08631.t1 MTR_5g072860 24.860 358 232 9 8 345 99 439 3.75e-19 89.0
MS.gene08631.t1 MTR_0288s0020 28.033 239 151 7 114 352 220 437 4.25e-19 89.0
MS.gene08631.t1 MTR_7g470610 35.570 149 90 2 167 313 128 272 4.29e-19 87.0
MS.gene08631.t1 MTR_7g070583 35.570 149 90 2 167 313 128 272 4.29e-19 87.0
MS.gene08631.t1 MTR_4g082820 35.115 131 83 1 172 300 263 393 7.01e-19 88.2
MS.gene08631.t1 MTR_5g090630 28.384 229 147 5 156 368 235 462 7.27e-19 88.2
MS.gene08631.t1 MTR_5g070090 25.357 280 179 11 90 356 184 446 1.18e-18 87.4
MS.gene08631.t1 MTR_5g067170 31.250 192 121 4 164 344 259 450 1.24e-18 87.4
MS.gene08631.t1 MTR_5g039900 25.231 325 206 7 12 314 108 417 1.29e-18 87.4
MS.gene08631.t1 MTR_7g070930 26.036 338 211 11 1 314 98 420 1.39e-18 87.4
MS.gene08631.t1 MTR_0036s0220 28.342 187 120 5 167 353 282 454 1.84e-18 87.0
MS.gene08631.t1 MTR_6g013990 27.419 186 122 5 167 352 282 454 2.15e-18 86.7
MS.gene08631.t1 MTR_3g084530 26.496 351 220 11 30 353 111 450 2.24e-18 86.7
MS.gene08631.t1 MTR_4g118000 29.817 218 131 7 171 372 256 467 2.28e-18 86.7
MS.gene08631.t1 MTR_8g009840 29.108 213 129 5 174 371 316 521 2.29e-18 87.0
MS.gene08631.t1 MTR_3g084540 30.319 188 124 3 167 351 266 449 2.56e-18 86.7
MS.gene08631.t1 MTR_7g011470 24.901 253 157 9 116 352 203 438 2.94e-18 86.3
MS.gene08631.t1 MTR_7g070870 25.698 358 224 11 1 343 103 433 3.04e-18 86.3
MS.gene08631.t1 MTR_5g070040 24.679 312 203 12 40 332 133 431 3.10e-18 86.3
MS.gene08631.t1 MTR_7g011470 24.901 253 157 9 116 352 207 442 3.22e-18 86.3
MS.gene08631.t1 MTR_1g107375 30.055 183 111 5 171 352 264 430 4.23e-18 85.9
MS.gene08631.t1 MTR_1g107285 24.556 338 210 11 36 352 127 440 5.15e-18 85.5
MS.gene08631.t1 MTR_6g014020 27.888 251 152 10 116 352 221 456 5.45e-18 85.5
MS.gene08631.t1 MTR_6g014170 28.495 186 120 5 167 352 266 438 8.00e-18 85.1
MS.gene08631.t1 MTR_7g070780 30.108 186 116 3 169 344 273 454 8.89e-18 85.1
MS.gene08631.t1 MTR_6g035295 23.757 362 242 9 12 348 107 459 9.51e-18 85.1
MS.gene08631.t1 MTR_7g039550 29.388 245 129 8 134 351 5 232 9.71e-18 82.8
MS.gene08631.t1 MTR_8g059425 27.092 251 154 11 116 352 219 454 1.05e-17 84.7
MS.gene08631.t1 MTR_3g479470 30.263 228 135 9 119 332 222 439 1.09e-17 84.7
MS.gene08631.t1 MTR_6g011340 27.957 186 121 5 167 352 284 456 1.10e-17 84.7
MS.gene08631.t1 MTR_7g080900 29.834 181 114 4 171 351 264 431 1.11e-17 84.7
MS.gene08631.t1 MTR_6g013900 27.957 186 121 5 167 352 283 455 1.23e-17 84.7
MS.gene08631.t1 MTR_2g083440 39.000 100 59 2 274 372 11 109 1.26e-17 78.2
MS.gene08631.t1 MTR_5g031860 32.857 140 88 3 171 310 280 413 1.51e-17 84.3
MS.gene08631.t1 MTR_8g007585 29.381 194 122 7 161 352 188 368 2.00e-17 83.6
MS.gene08631.t1 MTR_6g013450 28.495 186 120 5 167 352 285 457 2.08e-17 84.0
MS.gene08631.t1 MTR_6g014220 24.199 281 174 10 95 352 190 454 2.29e-17 83.6
MS.gene08631.t1 MTR_6g014250 24.314 255 163 8 114 353 216 455 3.09e-17 83.2
MS.gene08631.t1 MTR_4g079280 31.818 154 81 5 5 152 48 183 3.11e-17 79.3
MS.gene08631.t1 MTR_2086s0010 28.750 160 102 4 193 352 1 148 3.35e-17 79.0
MS.gene08631.t1 MTR_1996s0010 28.750 160 102 4 193 352 1 148 3.35e-17 79.0
MS.gene08631.t1 MTR_6g014050 27.717 184 120 5 169 352 287 457 3.60e-17 83.2
MS.gene08631.t1 MTR_5g090600 24.723 271 174 8 114 368 194 450 4.22e-17 82.8
MS.gene08631.t1 MTR_3g084520 30.392 204 130 5 153 353 256 450 4.87e-17 82.8
MS.gene08631.t1 MTR_6g013920 24.603 252 161 7 115 352 219 455 7.65e-17 82.0
MS.gene08631.t1 MTR_6g014270 26.882 186 123 5 167 352 283 455 1.18e-16 81.6
MS.gene08631.t1 MTR_6g014200 26.882 186 123 5 167 352 281 453 1.20e-16 81.6
MS.gene08631.t1 MTR_5g029800 33.784 148 95 2 167 311 260 407 1.33e-16 81.3
MS.gene08631.t1 MTR_3g008010 28.261 184 115 5 171 352 286 454 1.41e-16 81.3
MS.gene08631.t1 MTR_6g013960 26.203 187 125 5 167 353 284 457 1.42e-16 81.3
MS.gene08631.t1 MTR_7g070910 24.274 379 247 13 1 353 95 459 1.78e-16 81.3
MS.gene08631.t1 MTR_5g031830 33.571 140 87 3 171 310 281 414 2.45e-16 80.5
MS.gene08631.t1 MTR_4g064987 25.449 334 200 10 28 342 112 415 3.07e-16 80.1
MS.gene08631.t1 MTR_6g014150 25.714 315 198 13 28 315 122 427 3.81e-16 80.1
MS.gene08631.t1 MTR_6g014187 25.498 251 158 9 116 352 221 456 4.13e-16 80.1
MS.gene08631.t1 MTR_3g031400 25.820 244 158 5 116 351 197 425 4.14e-16 79.7
MS.gene08631.t1 MTR_7g071040 24.129 373 242 12 1 344 101 461 5.26e-16 79.7
MS.gene08631.t1 MTR_5g058320 27.419 186 122 5 167 352 269 441 6.06e-16 79.3
MS.gene08631.t1 MTR_5g031840 25.083 303 191 10 29 310 118 405 7.15e-16 79.3
MS.gene08631.t1 MTR_6g014190 26.344 186 124 6 167 352 91 263 1.21e-15 77.0
MS.gene08631.t1 MTR_6g014040 27.419 186 122 5 167 352 285 457 1.81e-15 78.2
MS.gene08631.t1 MTR_4g064987 25.294 340 199 11 28 342 112 421 4.88e-15 76.6
MS.gene08631.t1 MTR_3g031450 24.380 242 156 5 116 345 195 421 1.48e-14 75.1
MS.gene08631.t1 MTR_6g014240 25.946 185 124 5 167 351 251 422 1.58e-14 75.1
MS.gene08631.t1 MTR_5g090690 32.432 148 86 5 156 290 172 318 1.81e-14 74.3
MS.gene08631.t1 MTR_6g014300 23.967 242 157 8 116 352 223 442 1.98e-14 74.7
MS.gene08631.t1 MTR_0536s0030 38.889 90 53 1 224 311 192 281 2.25e-14 73.9
MS.gene08631.t1 MTR_7g071050 24.859 354 192 9 1 332 97 398 3.33e-14 73.9
MS.gene08631.t1 MTR_4g094220 28.571 182 118 6 171 352 286 455 3.80e-14 73.9
MS.gene08631.t1 MTR_6g014310 23.381 278 179 9 95 352 194 457 5.20e-14 73.6
MS.gene08631.t1 MTR_6g078320 28.846 208 134 5 150 348 252 454 2.42e-13 71.6
MS.gene08631.t1 MTR_0477s0010 26.344 186 124 5 167 352 121 293 5.88e-13 69.3
MS.gene08631.t1 MTR_6g014290 24.725 182 124 5 171 352 286 454 6.67e-13 70.1
MS.gene08631.t1 MTR_8g028755 26.087 207 108 6 127 333 61 222 8.22e-12 65.1
MS.gene08631.t1 MTR_5g072850 26.087 207 128 6 116 312 149 340 1.53e-11 65.5
MS.gene08631.t1 MTR_8g043470 26.230 183 124 5 171 352 186 358 3.53e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08631.t1 AT5G54010 40.160 376 198 9 5 372 88 444 1.63e-88 274
MS.gene08631.t1 AT2G22930 37.838 370 209 8 5 372 88 438 1.17e-83 261
MS.gene08631.t1 AT5G53990 37.466 371 211 8 5 373 88 439 2.62e-83 261
MS.gene08631.t1 AT4G27570 38.095 378 202 10 5 372 89 444 3.03e-83 261
MS.gene08631.t1 AT4G27560 37.795 381 199 11 5 372 89 444 4.18e-83 260
MS.gene08631.t1 AT1G64910 38.172 372 207 10 5 373 88 439 4.83e-83 260
MS.gene08631.t1 AT4G09500 37.027 370 212 9 5 372 88 438 6.63e-80 252
MS.gene08631.t1 AT5G54060 37.097 372 211 10 5 364 95 455 9.20e-80 252
MS.gene08631.t1 AT3G29630 36.702 376 212 9 4 373 87 442 5.82e-79 249
MS.gene08631.t1 AT1G64920 35.657 373 213 11 8 373 91 443 6.18e-77 244
MS.gene08631.t1 AT1G50580 35.405 370 213 9 8 372 91 439 3.51e-75 240
MS.gene08631.t1 AT3G29630 35.657 373 194 10 4 373 87 416 1.76e-71 229
MS.gene08631.t1 AT4G09500 34.959 369 196 10 5 372 88 413 2.56e-68 221
MS.gene08631.t1 AT2G22590 31.016 374 238 8 8 371 103 466 1.58e-52 181
MS.gene08631.t1 AT5G65550 29.570 372 238 9 5 363 91 451 2.49e-46 164
MS.gene08631.t1 AT5G49690 28.796 382 240 10 4 373 92 453 7.20e-46 163
MS.gene08631.t1 AT4G36770 36.620 213 119 4 150 352 234 440 1.76e-32 127
MS.gene08631.t1 AT4G34138 27.528 356 225 9 8 345 112 452 1.33e-31 125
MS.gene08631.t1 AT2G31750 28.974 390 221 17 13 371 90 454 1.90e-31 124
MS.gene08631.t1 AT2G31750 28.974 390 221 17 13 371 90 454 3.40e-31 124
MS.gene08631.t1 AT4G34135 31.624 234 139 3 116 333 214 442 7.14e-30 120
MS.gene08631.t1 AT2G15490 26.211 351 240 6 12 348 110 455 1.05e-29 119
MS.gene08631.t1 AT4G34131 28.212 358 225 8 13 352 114 457 5.18e-29 117
MS.gene08631.t1 AT4G01070 34.021 194 116 3 167 352 255 444 5.89e-29 117
MS.gene08631.t1 AT2G15490 26.211 351 237 7 12 348 110 452 6.24e-29 117
MS.gene08631.t1 AT2G31790 30.031 323 184 11 75 371 150 456 1.74e-28 115
MS.gene08631.t1 AT2G36750 27.049 366 238 10 4 345 97 457 5.03e-28 115
MS.gene08631.t1 AT3G16520 32.967 182 114 3 171 351 261 435 2.05e-27 113
MS.gene08631.t1 AT3G16520 32.967 182 114 3 171 351 261 435 2.40e-27 112
MS.gene08631.t1 AT3G16520 32.967 182 114 3 171 351 261 435 3.36e-27 112
MS.gene08631.t1 AT2G18560 30.435 207 132 4 150 351 153 352 3.90e-27 111
MS.gene08631.t1 AT2G15480 28.571 315 199 8 12 311 113 416 6.64e-27 112
MS.gene08631.t1 AT2G15480 28.571 315 199 8 12 311 113 416 6.72e-27 111
MS.gene08631.t1 AT1G01420 31.048 248 153 6 118 352 204 446 7.70e-27 111
MS.gene08631.t1 AT1G01420 31.048 248 153 6 118 352 201 443 8.37e-27 111
MS.gene08631.t1 AT1G05675 26.857 350 209 12 25 351 103 428 1.28e-26 110
MS.gene08631.t1 AT2G18570 30.811 185 122 3 172 351 259 442 1.70e-26 110
MS.gene08631.t1 AT1G05680 26.000 350 212 12 25 351 103 428 6.61e-26 108
MS.gene08631.t1 AT2G36760 36.842 190 107 4 167 345 275 462 6.73e-26 108
MS.gene08631.t1 AT1G01390 30.483 269 172 7 119 373 202 469 1.52e-25 107
MS.gene08631.t1 AT1G01390 30.483 269 172 7 119 373 219 486 1.82e-25 107
MS.gene08631.t1 AT5G05880 28.216 241 157 7 117 352 196 425 3.58e-25 106
MS.gene08631.t1 AT3G50740 30.928 194 119 2 171 352 259 449 4.33e-25 106
MS.gene08631.t1 AT5G05890 28.512 242 157 5 116 352 199 429 7.93e-25 105
MS.gene08631.t1 AT5G12890 26.957 345 229 9 27 356 128 464 9.64e-25 105
MS.gene08631.t1 AT2G36780 31.535 241 141 6 127 345 224 462 1.05e-24 105
MS.gene08631.t1 AT2G16890 27.542 236 153 5 118 346 213 437 2.61e-24 104
MS.gene08631.t1 AT2G30150 26.627 338 220 10 25 352 94 413 3.07e-24 103
MS.gene08631.t1 AT5G05870 29.502 261 164 7 84 338 174 420 4.27e-24 103
MS.gene08631.t1 AT2G36770 27.543 403 244 15 7 373 104 494 4.83e-24 103
MS.gene08631.t1 AT2G30150 26.627 338 220 10 25 352 110 429 4.88e-24 103
MS.gene08631.t1 AT5G03490 31.844 179 110 2 171 349 273 439 5.46e-24 103
MS.gene08631.t1 AT3G53150 28.037 321 208 8 8 311 114 428 7.23e-24 103
MS.gene08631.t1 AT2G36800 26.344 372 233 13 7 348 102 462 9.25e-24 102
MS.gene08631.t1 AT5G66690 32.609 184 110 2 171 342 254 435 1.17e-23 102
MS.gene08631.t1 AT2G29730 26.710 307 184 8 48 332 136 423 1.27e-23 102
MS.gene08631.t1 AT3G53160 24.862 362 236 9 8 342 99 451 1.91e-23 102
MS.gene08631.t1 AT1G73880 30.890 191 120 4 127 309 220 406 1.95e-23 101
MS.gene08631.t1 AT1G10400 28.992 238 145 7 118 346 210 432 2.39e-23 101
MS.gene08631.t1 AT2G43820 29.545 264 146 8 114 355 181 426 3.75e-23 100
MS.gene08631.t1 AT2G29740 28.800 250 165 7 116 356 214 459 4.09e-23 100
MS.gene08631.t1 AT3G22250 36.082 194 99 8 171 360 274 446 4.78e-23 100
MS.gene08631.t1 AT1G78270 32.447 188 113 4 167 353 283 457 6.20e-23 100
MS.gene08631.t1 AT5G59590 28.173 323 197 14 43 352 126 426 2.36e-22 98.2
MS.gene08631.t1 AT2G16890 27.570 214 140 4 118 324 213 418 2.57e-22 98.2
MS.gene08631.t1 AT1G51210 28.500 200 120 4 120 310 212 397 2.65e-22 98.2
MS.gene08631.t1 AT3G11340 29.876 241 153 6 117 352 192 421 3.68e-22 97.8
MS.gene08631.t1 AT3G21750 27.073 410 239 16 5 368 74 469 4.23e-22 97.8
MS.gene08631.t1 AT4G15280 30.275 218 133 6 171 371 294 509 4.93e-22 97.8
MS.gene08631.t1 AT2G26480 24.576 354 230 10 26 366 102 431 4.97e-22 97.4
MS.gene08631.t1 AT4G15280 30.275 218 133 6 171 371 262 477 5.25e-22 97.4
MS.gene08631.t1 AT2G29750 30.579 242 149 8 116 345 214 448 6.37e-22 97.4
MS.gene08631.t1 AT1G07250 26.394 269 182 8 114 371 209 472 6.80e-22 97.4
MS.gene08631.t1 AT5G05860 29.508 244 156 5 114 352 192 424 9.18e-22 96.7
MS.gene08631.t1 AT4G15260 31.481 216 128 6 171 368 142 355 1.08e-21 95.5
MS.gene08631.t1 AT5G14860 29.487 234 144 8 123 345 225 448 1.13e-21 96.7
MS.gene08631.t1 AT3G46680 27.193 342 210 11 28 354 111 428 1.21e-21 96.3
MS.gene08631.t1 AT5G26310 26.923 260 164 5 114 352 188 442 1.45e-21 96.3
MS.gene08631.t1 AT1G07260 26.190 336 217 12 39 356 134 456 2.24e-21 95.9
MS.gene08631.t1 AT2G30140 26.786 336 220 11 25 352 111 428 2.37e-21 95.5
MS.gene08631.t1 AT5G59580 28.000 325 199 13 43 354 124 426 3.20e-21 95.1
MS.gene08631.t1 AT3G21790 25.895 363 233 10 40 373 129 484 4.74e-21 94.7
MS.gene08631.t1 AT2G29710 30.964 197 123 4 121 310 208 398 5.91e-21 94.4
MS.gene08631.t1 AT2G30140 29.870 231 143 7 127 352 211 427 6.92e-21 94.0
MS.gene08631.t1 AT2G43840 32.418 182 108 5 173 353 257 424 7.46e-21 94.0
MS.gene08631.t1 AT2G43840 32.418 182 108 5 173 353 257 424 7.53e-21 94.0
MS.gene08631.t1 AT3G46670 29.362 235 151 7 124 354 204 427 8.13e-21 94.0
MS.gene08631.t1 AT2G36970 28.571 245 159 7 116 356 219 451 1.30e-20 93.6
MS.gene08631.t1 AT4G15480 28.980 245 153 9 119 351 219 454 1.80e-20 93.2
MS.gene08631.t1 AT5G38040 28.000 275 183 6 103 371 184 449 2.61e-20 92.4
MS.gene08631.t1 AT1G05560 34.574 188 113 4 173 356 251 432 3.39e-20 92.0
MS.gene08631.t1 AT1G05560 34.574 188 113 4 173 356 301 482 3.54e-20 92.4
MS.gene08631.t1 AT1G22400 30.964 197 122 6 167 363 285 467 1.05e-19 90.9
MS.gene08631.t1 AT1G06000 30.126 239 143 6 114 328 165 403 1.41e-19 90.1
MS.gene08631.t1 AT3G21560 31.522 184 113 6 171 352 277 449 1.44e-19 90.5
MS.gene08631.t1 AT5G17050 30.055 183 112 4 171 353 268 434 1.87e-19 90.1
MS.gene08631.t1 AT3G55700 24.781 343 233 11 40 373 126 452 1.94e-19 89.7
MS.gene08631.t1 AT1G24100 30.097 206 122 6 171 367 266 458 2.15e-19 89.7
MS.gene08631.t1 AT3G46700 26.844 339 216 13 28 354 105 423 2.88e-19 89.4
MS.gene08631.t1 AT2G28080 30.899 178 117 4 167 344 275 446 2.88e-19 89.4
MS.gene08631.t1 AT1G22380 24.576 354 220 12 28 353 123 457 5.09e-19 89.0
MS.gene08631.t1 AT5G05900 26.271 236 151 6 122 352 207 424 5.88e-19 88.6
MS.gene08631.t1 AT3G21760 24.457 368 228 11 40 371 131 484 6.41e-19 88.6
MS.gene08631.t1 AT4G15550 32.447 188 121 4 169 353 267 451 6.51e-19 88.6
MS.gene08631.t1 AT3G46690 26.822 343 211 11 28 354 110 428 8.15e-19 87.8
MS.gene08631.t1 AT2G36790 25.333 375 238 12 4 348 100 462 1.00e-18 87.8
MS.gene08631.t1 AT4G14090 30.808 198 123 6 167 361 255 441 1.35e-18 87.4
MS.gene08631.t1 AT3G46660 31.000 200 125 6 157 354 246 434 1.67e-18 87.0
MS.gene08631.t1 AT1G07240 30.732 205 128 6 116 311 210 409 2.57e-18 86.7
MS.gene08631.t1 AT1G30530 27.273 330 197 14 40 354 128 429 3.15e-18 86.3
MS.gene08631.t1 AT1G05530 26.531 343 215 10 28 353 110 432 3.97e-18 85.9
MS.gene08631.t1 AT3G21780 26.606 218 141 6 171 371 257 472 1.22e-17 84.7
MS.gene08631.t1 AT3G55710 28.780 205 131 6 173 373 263 456 1.41e-17 84.3
MS.gene08631.t1 AT5G17030 24.498 249 165 8 111 353 202 433 1.69e-17 84.0
MS.gene08631.t1 AT3G02100 24.397 373 219 12 28 371 125 463 1.79e-17 84.0
MS.gene08631.t1 AT1G22360 29.412 187 119 5 167 353 281 454 1.96e-17 84.0
MS.gene08631.t1 AT3G21800 27.778 216 136 7 171 368 263 476 2.27e-17 84.0
MS.gene08631.t1 AT5G38010 27.273 242 154 6 124 360 209 433 3.98e-17 82.8
MS.gene08631.t1 AT1G22340 25.070 355 218 12 28 353 123 458 4.73e-17 82.8
MS.gene08631.t1 AT4G15500 30.102 196 121 6 158 352 259 439 1.31e-16 81.6
MS.gene08631.t1 AT5G17040 24.291 247 162 6 114 353 189 417 1.81e-16 80.9
MS.gene08631.t1 AT5G17040 23.887 247 163 6 114 353 87 315 2.60e-16 79.7
MS.gene08631.t1 AT1G22370 32.624 141 90 3 171 311 113 248 1.05e-15 77.4
MS.gene08631.t1 AT1G22370 32.414 145 93 3 167 311 279 418 2.22e-15 77.8
MS.gene08631.t1 AT3G46720 25.948 343 202 12 27 354 114 419 6.95e-15 76.3
MS.gene08631.t1 AT4G15490 28.718 195 123 6 158 351 263 442 9.95e-15 75.9
MS.gene08631.t1 AT1G22360 31.034 145 95 3 167 311 281 420 1.11e-14 75.5
MS.gene08631.t1 AT2G23250 25.225 222 142 6 110 317 169 380 3.39e-14 73.9
MS.gene08631.t1 AT3G46650 26.205 332 209 11 28 354 111 411 1.38e-13 72.0
MS.gene08631.t1 AT2G23260 26.708 161 110 2 171 331 260 412 1.55e-13 72.0
MS.gene08631.t1 AT2G22930 31.343 134 77 4 5 137 88 207 2.26e-12 67.4

Find 65 sgRNAs with CRISPR-Local

Find 85 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATGTCAAAGAAAATGAAAT+TGG 0.234927 4.1:+39167853 None:intergenic
GGGTTTAAGTTCAAACAAAA+TGG 0.272643 4.1:+39167874 None:intergenic
GATTCAGCATTGAGATTTGA+TGG 0.276019 4.1:+39167272 None:intergenic
TGAAGGGAAAGCTTGGAATT+TGG 0.278368 4.1:+39167659 None:intergenic
CATAAAATCTGTTTACTTCT+CGG 0.280321 4.1:-39167792 MS.gene08631:CDS
GTGAATAGGAAAGATGAAAA+TGG 0.336199 4.1:-39166999 MS.gene08631:CDS
CAAATCAATGAACTAGCAAT+TGG 0.338909 4.1:-39167338 MS.gene08631:CDS
ACTCTTTCTAAGAACCCTTT+TGG 0.365896 4.1:+39167230 None:intergenic
ATATTGCACTCGGGCATGTT+TGG 0.367689 4.1:-39167941 None:intergenic
GTTGGTGTTACTACCTTTCA+AGG 0.369715 4.1:-39167078 MS.gene08631:CDS
CTTAGAAAGAGTGAAGAATA+GGG 0.369923 4.1:-39167219 MS.gene08631:CDS
TCTTAGAAAGAGTGAAGAAT+AGG 0.376680 4.1:-39167220 MS.gene08631:CDS
TCCTCAAGCAGGTCCATTGA+TGG 0.378534 4.1:+39167446 None:intergenic
CTTTATGAAAGTTAAAAGAT+TGG 0.392468 4.1:+39167600 None:intergenic
GCTCAAGAGTTGCAAGGAAA+TGG 0.394591 4.1:-39167543 MS.gene08631:CDS
TTCAAGACTTGATGATACTA+AGG 0.405834 4.1:-39167732 MS.gene08631:CDS
AGGCTGGGGTAGAGGTGAAT+AGG 0.418053 4.1:-39167013 MS.gene08631:CDS
ATTGCTGATGATTTGAAGGC+TGG 0.421214 4.1:-39167029 MS.gene08631:CDS
AGCAGGTCCATTGATGGCTC+TGG 0.424734 4.1:+39167452 None:intergenic
ACTCATTGCTGATGATTTGA+AGG 0.429430 4.1:-39167033 MS.gene08631:CDS
GGTTGCGCAGTTGAAGTCTT+AGG 0.429872 4.1:-39166826 None:intergenic
TCAGTGATATTGTGCTCCTT+TGG 0.432139 4.1:-39167386 MS.gene08631:CDS
CACAATATCACTGACTTGGT+TGG 0.444908 4.1:+39167395 None:intergenic
GAGAAAATCATATGAAATTG+AGG 0.444938 4.1:-39166896 MS.gene08631:CDS
GAACAAATTCATCACAGATC+TGG 0.450684 4.1:-39166847 MS.gene08631:CDS
ATGTCAAAGAAAATGAAATT+GGG 0.453198 4.1:+39167854 None:intergenic
TGAGGCTGTGAAAACTGTTA+TGG 0.454282 4.1:-39166952 MS.gene08631:CDS
GGGTGTTATGTGTGTCATGC+TGG 0.456287 4.1:-39167140 MS.gene08631:CDS
TTAGAAAGAGCGTTACCAAA+AGG 0.459462 4.1:-39167245 MS.gene08631:CDS
TGCGAAAGAGGATTTGTTTG+AGG 0.465759 4.1:-39166970 MS.gene08631:CDS
TCTTTGACATTGCAACAAGT+TGG 0.469845 4.1:-39167841 MS.gene08631:CDS
ACAATATCACTGACTTGGTT+GGG 0.479357 4.1:+39167396 None:intergenic
AAAATTTAAGACTAAAATGA+AGG 0.481057 4.1:+39167295 None:intergenic
AGAAAATCATATGAAATTGA+GGG 0.481923 4.1:-39166895 MS.gene08631:CDS
GTGGAAGTTGATAAAGAGCC+AGG 0.485626 4.1:-39166930 MS.gene08631:CDS
GAAGGTTTGAAGGGAAAGCT+TGG 0.487609 4.1:+39167652 None:intergenic
TAGAAAGAGCGTTACCAAAA+GGG 0.495137 4.1:-39167244 MS.gene08631:CDS
AAATCAATGAACTAGCAATT+GGG 0.504857 4.1:-39167337 MS.gene08631:CDS
ACATAGGTAAGATGCTGAAA+TGG 0.506674 4.1:+39167760 None:intergenic
TTTGGCTTGGAAGGTTTGAA+GGG 0.514232 4.1:+39167643 None:intergenic
TTGCTGATGATTTGAAGGCT+GGG 0.528328 4.1:-39167028 MS.gene08631:CDS
GGGAAGAGACATCACTTATG+AGG 0.530994 4.1:-39167711 MS.gene08631:CDS
TAGAAATGTTTCACTACCAA+AGG 0.536894 4.1:+39167370 None:intergenic
CAATGAACTAGCAATTGGGT+TGG 0.538714 4.1:-39167333 MS.gene08631:CDS
AATTTGGAAAATACCCAAGT+GGG 0.540057 4.1:+39167675 None:intergenic
ACTTGTTCCAGAGCCATCAA+TGG 0.543678 4.1:-39167459 MS.gene08631:CDS
TGATTTGAAGGCTGGGGTAG+AGG 0.553963 4.1:-39167021 MS.gene08631:CDS
AATAGGGGAATTGTGCATAG+TGG 0.557387 4.1:-39167203 MS.gene08631:CDS
TATAGTTAATGATTGTCAGT+TGG 0.561220 4.1:-39167096 MS.gene08631:CDS
TTAGAAAGAGTGAAGAATAG+GGG 0.561511 4.1:-39167218 MS.gene08631:CDS
TTGATAAAGAGCCAGGAAGA+CGG 0.565760 4.1:-39166923 MS.gene08631:CDS
CAAGTCTTGAAGATGAACAT+AGG 0.568467 4.1:+39167744 None:intergenic
TGCTGATGATTTGAAGGCTG+GGG 0.574525 4.1:-39167027 MS.gene08631:CDS
GCCATCAATGGACCTGCTTG+AGG 0.577803 4.1:-39167447 MS.gene08631:CDS
AATAGTGCTCAAGAGTTGCA+AGG 0.600108 4.1:-39167549 MS.gene08631:CDS
TTGGTGTTACTACCTTTCAA+GGG 0.602494 4.1:-39167077 MS.gene08631:CDS
GGAGCACAATATCACTGACT+TGG 0.606129 4.1:+39167391 None:intergenic
TCAAGACTTGATGATACTAA+GGG 0.608279 4.1:-39167731 MS.gene08631:CDS
AAATTTAAGACTAAAATGAA+GGG 0.611861 4.1:+39167296 None:intergenic
AAGAGTTGCAAGGAAATGGA+AGG 0.626085 4.1:-39167539 MS.gene08631:CDS
GGCTGTGAAAACTGTTATGG+TGG 0.628947 4.1:-39166949 MS.gene08631:CDS
TTTGGAAAATACCCAAGTGG+GGG 0.640667 4.1:+39167677 None:intergenic
GAATTTGGAAAATACCCAAG+TGG 0.644480 4.1:+39167674 None:intergenic
GGGGAATTGTGCATAGTGGT+TGG 0.659752 4.1:-39167199 MS.gene08631:CDS
ATTTGGAAAATACCCAAGTG+GGG 0.662601 4.1:+39167676 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATTTAAGACTAAAATGA+AGG + chr4.1:39167461-39167480 None:intergenic 15.0%
!!! AAATTTAAGACTAAAATGAA+GGG + chr4.1:39167460-39167479 None:intergenic 15.0%
!!! TTTTGAAAATAATCTAGATA+AGG + chr4.1:39167241-39167260 None:intergenic 15.0%
!! AATGTCAAAGAAAATGAAAT+TGG + chr4.1:39166903-39166922 None:intergenic 20.0%
!! AGAAAATCATATGAAATTGA+GGG - chr4.1:39167858-39167877 MS.gene08631:CDS 20.0%
!! ATGTCAAAGAAAATGAAATT+GGG + chr4.1:39166902-39166921 None:intergenic 20.0%
!! CTTTATGAAAGTTAAAAGAT+TGG + chr4.1:39167156-39167175 None:intergenic 20.0%
! AAATCAATGAACTAGCAATT+GGG - chr4.1:39167416-39167435 MS.gene08631:CDS 25.0%
! CATAAAATCTGTTTACTTCT+CGG - chr4.1:39166961-39166980 MS.gene08631:CDS 25.0%
! GAGAAAATCATATGAAATTG+AGG - chr4.1:39167857-39167876 MS.gene08631:CDS 25.0%
! TATAGTTAATGATTGTCAGT+TGG - chr4.1:39167657-39167676 MS.gene08631:CDS 25.0%
!! GAGTGCTATGAAAATATTTT+TGG + chr4.1:39167131-39167150 None:intergenic 25.0%
!!! CTATGAAAATATTTTTGGCT+TGG + chr4.1:39167126-39167145 None:intergenic 25.0%
AATTTGGAAAATACCCAAGT+GGG + chr4.1:39167081-39167100 None:intergenic 30.0%
CAAATCAATGAACTAGCAAT+TGG - chr4.1:39167415-39167434 MS.gene08631:CDS 30.0%
CTTAGAAAGAGTGAAGAATA+GGG - chr4.1:39167534-39167553 MS.gene08631:CDS 30.0%
GTGAATAGGAAAGATGAAAA+TGG - chr4.1:39167754-39167773 MS.gene08631:CDS 30.0%
TAGAAATGTTTCACTACCAA+AGG + chr4.1:39167386-39167405 None:intergenic 30.0%
TCTTAGAAAGAGTGAAGAAT+AGG - chr4.1:39167533-39167552 MS.gene08631:CDS 30.0%
TTAGAAAGAGTGAAGAATAG+GGG - chr4.1:39167535-39167554 MS.gene08631:CDS 30.0%
TTGAGGAAAAATGGATGAAA+TGG - chr4.1:39167323-39167342 MS.gene08631:CDS 30.0%
! GAAATTGAGGGAGTTTTTAT+TGG - chr4.1:39167870-39167889 MS.gene08631:CDS 30.0%
! GGGTTTAAGTTCAAACAAAA+TGG + chr4.1:39166882-39166901 None:intergenic 30.0%
! TCAAGACTTGATGATACTAA+GGG - chr4.1:39167022-39167041 MS.gene08631:CDS 30.0%
! TTCAAGACTTGATGATACTA+AGG - chr4.1:39167021-39167040 MS.gene08631:CDS 30.0%
!! ATTTTAAAAATCCCCCACTT+GGG - chr4.1:39167065-39167084 MS.gene08631:CDS 30.0%
!!! AAATGGATTTTTTGCGAAAG+AGG - chr4.1:39167771-39167790 MS.gene08631:CDS 30.0%
!!! CAAGTTCAGAAGCTATTTTT+GGG + chr4.1:39166940-39166959 None:intergenic 30.0%
!!! GAAAAACCAGTTCTTTTTTC+TGG - chr4.1:39167268-39167287 MS.gene08631:CDS 30.0%
!!! GAAAATATTTTTGGCTTGGA+AGG + chr4.1:39167122-39167141 None:intergenic 30.0%
AAAAACTGATCACCCTTGAA+AGG + chr4.1:39167691-39167710 None:intergenic 35.0%
ACATAGGTAAGATGCTGAAA+TGG + chr4.1:39166996-39167015 None:intergenic 35.0%
ACTCATTGCTGATGATTTGA+AGG - chr4.1:39167720-39167739 MS.gene08631:CDS 35.0%
AGTACTCCAGAAAAAAGAAC+TGG + chr4.1:39167277-39167296 None:intergenic 35.0%
ATTTGGAAAATACCCAAGTG+GGG + chr4.1:39167080-39167099 None:intergenic 35.0%
CAAGTCTTGAAGATGAACAT+AGG + chr4.1:39167012-39167031 None:intergenic 35.0%
CCAAAAATAGCTTCTGAACT+TGG - chr4.1:39166938-39166957 MS.gene08631:CDS 35.0%
GAACAAATTCATCACAGATC+TGG - chr4.1:39167906-39167925 MS.gene08631:CDS 35.0%
GAATTTGGAAAATACCCAAG+TGG + chr4.1:39167082-39167101 None:intergenic 35.0%
TCTTTGACATTGCAACAAGT+TGG - chr4.1:39166912-39166931 MS.gene08631:CDS 35.0%
! GAGGGAGTTTTTATTGGATA+AGG - chr4.1:39167876-39167895 MS.gene08631:CDS 35.0%
! GATTCAGCATTGAGATTTGA+TGG + chr4.1:39167484-39167503 None:intergenic 35.0%
!! ACAATATCACTGACTTGGTT+GGG + chr4.1:39167360-39167379 None:intergenic 35.0%
!! ACTCTTTCTAAGAACCCTTT+TGG + chr4.1:39167526-39167545 None:intergenic 35.0%
!! CCAAGTTCAGAAGCTATTTT+TGG + chr4.1:39166941-39166960 None:intergenic 35.0%
!! GATTTTAAAAATCCCCCACT+TGG - chr4.1:39167064-39167083 MS.gene08631:CDS 35.0%
!! TAGAAAGAGCGTTACCAAAA+GGG - chr4.1:39167509-39167528 MS.gene08631:CDS 35.0%
!! TTAGAAAGAGCGTTACCAAA+AGG - chr4.1:39167508-39167527 MS.gene08631:CDS 35.0%
!! TTGGTGTTACTACCTTTCAA+GGG - chr4.1:39167676-39167695 MS.gene08631:CDS 35.0%
!!! TTTTGAAGCACTCAAGTGTT+GGG - chr4.1:39167593-39167612 MS.gene08631:CDS 35.0%
AAGAGTTGCAAGGAAATGGA+AGG - chr4.1:39167214-39167233 MS.gene08631:CDS 40.0%
AATAGGGGAATTGTGCATAG+TGG - chr4.1:39167550-39167569 MS.gene08631:CDS 40.0%
AATAGTGCTCAAGAGTTGCA+AGG - chr4.1:39167204-39167223 MS.gene08631:CDS 40.0%
ATTGCTGATGATTTGAAGGC+TGG - chr4.1:39167724-39167743 MS.gene08631:CDS 40.0%
CAATGAACTAGCAATTGGGT+TGG - chr4.1:39167420-39167439 MS.gene08631:CDS 40.0%
TCAGTGATATTGTGCTCCTT+TGG - chr4.1:39167367-39167386 MS.gene08631:CDS 40.0%
TGAAGGGAAAGCTTGGAATT+TGG + chr4.1:39167097-39167116 None:intergenic 40.0%
TGAGGCTGTGAAAACTGTTA+TGG - chr4.1:39167801-39167820 MS.gene08631:CDS 40.0%
TTGATAAAGAGCCAGGAAGA+CGG - chr4.1:39167830-39167849 MS.gene08631:CDS 40.0%
TTGCTGATGATTTGAAGGCT+GGG - chr4.1:39167725-39167744 MS.gene08631:CDS 40.0%
TTTGGAAAATACCCAAGTGG+GGG + chr4.1:39167079-39167098 None:intergenic 40.0%
! TGCGAAAGAGGATTTGTTTG+AGG - chr4.1:39167783-39167802 MS.gene08631:CDS 40.0%
! TTTTCTCTTATCCGTCTTCC+TGG + chr4.1:39167844-39167863 None:intergenic 40.0%
!! CACAATATCACTGACTTGGT+TGG + chr4.1:39167361-39167380 None:intergenic 40.0%
!! GTTGGTGTTACTACCTTTCA+AGG - chr4.1:39167675-39167694 MS.gene08631:CDS 40.0%
!! TCATCCATTTTTCCTCAAGC+AGG + chr4.1:39167321-39167340 None:intergenic 40.0%
!! TTTGGCTTGGAAGGTTTGAA+GGG + chr4.1:39167113-39167132 None:intergenic 40.0%
!!! GTTTTGAAGCACTCAAGTGT+TGG - chr4.1:39167592-39167611 MS.gene08631:CDS 40.0%
!!! TTTTGGCTTGGAAGGTTTGA+AGG + chr4.1:39167114-39167133 None:intergenic 40.0%
ACTTGTTCCAGAGCCATCAA+TGG - chr4.1:39167294-39167313 MS.gene08631:CDS 45.0%
GAAGGTTTGAAGGGAAAGCT+TGG + chr4.1:39167104-39167123 None:intergenic 45.0%
GCTCAAGAGTTGCAAGGAAA+TGG - chr4.1:39167210-39167229 MS.gene08631:CDS 45.0%
GGCTGTGAAAACTGTTATGG+TGG - chr4.1:39167804-39167823 MS.gene08631:CDS 45.0%
GGGAAGAGACATCACTTATG+AGG - chr4.1:39167042-39167061 MS.gene08631:CDS 45.0%
TGCTGATGATTTGAAGGCTG+GGG - chr4.1:39167726-39167745 MS.gene08631:CDS 45.0%
TGGACCTGCTTGAGGAAAAA+TGG - chr4.1:39167314-39167333 MS.gene08631:CDS 45.0%
! GGAGCACAATATCACTGACT+TGG + chr4.1:39167365-39167384 None:intergenic 45.0%
!! GTGGAAGTTGATAAAGAGCC+AGG - chr4.1:39167823-39167842 MS.gene08631:CDS 45.0%
GGGGAATTGTGCATAGTGGT+TGG - chr4.1:39167554-39167573 MS.gene08631:CDS 50.0%
TCCTCAAGCAGGTCCATTGA+TGG + chr4.1:39167310-39167329 None:intergenic 50.0%
TGATTTGAAGGCTGGGGTAG+AGG - chr4.1:39167732-39167751 MS.gene08631:CDS 50.0%
! GGGTGTTATGTGTGTCATGC+TGG - chr4.1:39167613-39167632 MS.gene08631:CDS 50.0%
AGGCTGGGGTAGAGGTGAAT+AGG - chr4.1:39167740-39167759 MS.gene08631:CDS 55.0%
GCCATCAATGGACCTGCTTG+AGG - chr4.1:39167306-39167325 MS.gene08631:CDS 55.0%
! AGCAGGTCCATTGATGGCTC+TGG + chr4.1:39167304-39167323 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 39166827 39167948 39166827 ID=MS.gene08631
chr4.1 mRNA 39166827 39167948 39166827 ID=MS.gene08631.t1;Parent=MS.gene08631
chr4.1 exon 39166827 39167948 39166827 ID=MS.gene08631.t1.exon1;Parent=MS.gene08631.t1
chr4.1 CDS 39166827 39167948 39166827 ID=cds.MS.gene08631.t1;Parent=MS.gene08631.t1
Gene Sequence

>MS.gene08631

ATGTTTGGCACACTCATTCAAGCAATAGACTCAATGCAAGATCATGTAAAAACCATTTTGTTTGAACTTAAACCCAATTTCATTTTCTTTGACATTGCAACAAGTTGGATCCCAAAAATAGCTTCTGAACTTGGCATAAAATCTGTTTACTTCTCGGTCTACTCAGCCATTTCAGCATCTTACCTATGTTCATCTTCAAGACTTGATGATACTAAGGGAAGAGACATCACTTATGAGGATTTTAAAAATCCCCCACTTGGGTATTTTCCAAATTCCAAGCTTTCCCTTCAAACCTTCCAAGCCAAAAATATTTTCATAGCACTCTTCCAATCTTTTAACTTTCATAAAGTCATGCAAAACTTTAGTGAAAGCTCACTAATAGTGCTCAAGAGTTGCAAGGAAATGGAAGGTCCTTATCTAGATTATTTTCAAAATCAATTTGAAAAACCAGTTCTTTTTTCTGGAGTACTTGTTCCAGAGCCATCAATGGACCTGCTTGAGGAAAAATGGATGAAATGGTTAGATGATTTCCCAACCAAGTCAGTGATATTGTGCTCCTTTGGTAGTGAAACATTTCTAAGTGATGATCAAATCAATGAACTAGCAATTGGGTTGGAACTAACAAATTTACCCTTCATTTTAGTCTTAAATTTTCCATCAAATCTCAATGCTGAATCTGAGTTAGAAAGAGCGTTACCAAAAGGGTTCTTAGAAAGAGTGAAGAATAGGGGAATTGTGCATAGTGGTTGGCTGCAACAGCAACTTGTTTTGAAGCACTCAAGTGTTGGGTGTTATGTGTGTCATGCTGGTTTTAGTTCTCTGATAGAAGCTATAGTTAATGATTGTCAGTTGGTGTTACTACCTTTCAAGGGTGATCAGTTTTTAAATTCTAAACTCATTGCTGATGATTTGAAGGCTGGGGTAGAGGTGAATAGGAAAGATGAAAATGGATTTTTTGCGAAAGAGGATTTGTTTGAGGCTGTGAAAACTGTTATGGTGGAAGTTGATAAAGAGCCAGGAAGACGGATAAGAGAAAATCATATGAAATTGAGGGAGTTTTTATTGGATAAGGAAATTCAGAACAAATTCATCACAGATCTGGTTGCGCAGTTGAAGTCTTAG

Protein sequence

>MS.gene08631.t1

MFGTLIQAIDSMQDHVKTILFELKPNFIFFDIATSWIPKIASELGIKSVYFSVYSAISASYLCSSSRLDDTKGRDITYEDFKNPPLGYFPNSKLSLQTFQAKNIFIALFQSFNFHKVMQNFSESSLIVLKSCKEMEGPYLDYFQNQFEKPVLFSGVLVPEPSMDLLEEKWMKWLDDFPTKSVILCSFGSETFLSDDQINELAIGLELTNLPFILVLNFPSNLNAESELERALPKGFLERVKNRGIVHSGWLQQQLVLKHSSVGCYVCHAGFSSLIEAIVNDCQLVLLPFKGDQFLNSKLIADDLKAGVEVNRKDENGFFAKEDLFEAVKTVMVEVDKEPGRRIRENHMKLREFLLDKEIQNKFITDLVAQLKS