Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08655.t1 | XP_003629743.2 | 93.7 | 729 | 34 | 1 | 1 | 717 | 1 | 729 | 0.00E+00 | 1321.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08655.t1 | Q84P17 | 66.1 | 731 | 225 | 8 | 4 | 717 | 3 | 727 | 2.1e-275 | 949.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08655.t1 | G7LIP4 | 93.7 | 729 | 34 | 1 | 1 | 717 | 1 | 729 | 0.0e+00 | 1321.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08655 | MS.gene83231 | PPI |
| MS.gene045801 | MS.gene08655 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08655.t1 | MTR_8g086050 | 93.690 | 729 | 34 | 1 | 1 | 717 | 1 | 729 | 0.0 | 1357 |
| MS.gene08655.t1 | MTR_8g085680 | 84.088 | 729 | 103 | 2 | 1 | 717 | 1 | 728 | 0.0 | 1252 |
| MS.gene08655.t1 | MTR_8g086050 | 95.827 | 623 | 26 | 0 | 1 | 623 | 1 | 623 | 0.0 | 1192 |
| MS.gene08655.t1 | MTR_8g085680 | 83.885 | 695 | 99 | 2 | 1 | 683 | 1 | 694 | 0.0 | 1192 |
| MS.gene08655.t1 | MTR_8g086050 | 95.601 | 591 | 26 | 0 | 1 | 591 | 1 | 591 | 0.0 | 1126 |
| MS.gene08655.t1 | MTR_8g085680 | 87.591 | 548 | 67 | 1 | 1 | 548 | 1 | 547 | 0.0 | 976 |
| MS.gene08655.t1 | MTR_2g056120 | 49.386 | 733 | 335 | 11 | 1 | 710 | 1 | 720 | 0.0 | 703 |
| MS.gene08655.t1 | MTR_7g084850 | 25.268 | 653 | 409 | 25 | 108 | 711 | 102 | 724 | 2.65e-30 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08655.t1 | AT1G55320 | 67.442 | 731 | 215 | 8 | 4 | 717 | 3 | 727 | 0.0 | 1001 |
| MS.gene08655.t1 | AT1G55320 | 72.211 | 511 | 127 | 4 | 222 | 717 | 1 | 511 | 0.0 | 756 |
| MS.gene08655.t1 | AT5G23050 | 48.481 | 724 | 348 | 8 | 1 | 709 | 1 | 714 | 0.0 | 660 |
| MS.gene08655.t1 | AT5G23050 | 48.316 | 594 | 296 | 6 | 1 | 593 | 1 | 584 | 0.0 | 540 |
| MS.gene08655.t1 | AT5G36880 | 24.961 | 637 | 398 | 24 | 125 | 711 | 113 | 719 | 6.95e-27 | 117 |
| MS.gene08655.t1 | AT5G36880 | 24.804 | 637 | 399 | 24 | 125 | 711 | 63 | 669 | 1.21e-26 | 116 |
| MS.gene08655.t1 | AT5G36880 | 24.804 | 637 | 399 | 24 | 125 | 711 | 63 | 669 | 1.21e-26 | 116 |
| MS.gene08655.t1 | AT5G36880 | 24.804 | 637 | 399 | 24 | 125 | 711 | 63 | 669 | 1.21e-26 | 116 |
| MS.gene08655.t1 | AT5G36880 | 24.804 | 637 | 399 | 24 | 125 | 711 | 63 | 669 | 1.21e-26 | 116 |
Find 188 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCTCAATCCTTTGTTTA+AGG | 0.105370 | 4.3:-14694285 | MS.gene08655:intron |
| CTTCTCCTCCTCCTCTTTAT+TGG | 0.129077 | 4.3:-14705953 | MS.gene08655:CDS |
| TGCATCACCCTTGGAGAAAT+TGG | 0.134060 | 4.3:+14704906 | None:intergenic |
| CATGATGAGGTTTACTTTAA+AGG | 0.142037 | 4.3:-14695249 | MS.gene08655:CDS |
| GGATGCAGGTGTTACCATTT+TGG | 0.185825 | 4.3:-14696249 | MS.gene08655:CDS |
| AGCTCATGGTTCAGAGCTTT+TGG | 0.210475 | 4.3:-14705790 | MS.gene08655:CDS |
| TCTCCTCAAGGCCATGGTTT+TGG | 0.228125 | 4.3:-14697183 | MS.gene08655:CDS |
| CCCCTGCAGCCTCAAGCTTT+TGG | 0.237441 | 4.3:-14695951 | MS.gene08655:CDS |
| CTATTGCTGGCCGACAAATT+TGG | 0.238876 | 4.3:-14697277 | MS.gene08655:CDS |
| ATACTGTCGTCTGGTTTGTT+AGG | 0.246775 | 4.3:+14705108 | None:intergenic |
| ATGATGTAGCTGTACAATTA+AGG | 0.254361 | 4.3:-14702800 | MS.gene08655:CDS |
| TTATATCACTGCTTTCTAAA+TGG | 0.268015 | 4.3:-14697231 | MS.gene08655:CDS |
| CAGGGCTGATGAATGCATTT+TGG | 0.275186 | 4.3:-14694439 | MS.gene08655:CDS |
| AGTCGAGTGGCAATTTCTTT+TGG | 0.284136 | 4.3:+14704784 | None:intergenic |
| AAAGGAATGCCCTTGTATAA+AGG | 0.286398 | 4.3:-14695231 | MS.gene08655:CDS |
| TCGGTGTTGCAACTGAAAAT+AGG | 0.286948 | 4.3:-14694404 | MS.gene08655:CDS |
| CAGAACTTTCTTCAATTCAT+TGG | 0.294178 | 4.3:+14706118 | None:intergenic |
| GCTTGGAACGGTTCCCAAAA+TGG | 0.305618 | 4.3:+14696235 | None:intergenic |
| CTTTATTCCACCAAGATTCA+TGG | 0.317320 | 4.3:+14694740 | None:intergenic |
| CATCAGCAGCACTTCGTATT+GGG | 0.324593 | 4.3:+14697334 | None:intergenic |
| CGGTGTTGCAACTGAAAATA+GGG | 0.329692 | 4.3:-14694403 | MS.gene08655:CDS |
| CCTCCACATAATTCAATGAT+TGG | 0.330215 | 4.3:+14696008 | None:intergenic |
| CAATGCCGTTATTATATATC+TGG | 0.332167 | 4.3:-14704857 | MS.gene08655:CDS |
| CATGAATCTTGGTGGAATAA+AGG | 0.335098 | 4.3:-14694739 | MS.gene08655:intron |
| TGAGTCCAAGGAATAGCTTT+TGG | 0.336308 | 4.3:+14697363 | None:intergenic |
| GGTTTATTCCCCATCTCTCT+TGG | 0.342158 | 4.3:-14695300 | MS.gene08655:CDS |
| CATGGAGGAACATGGCTTCC+TGG | 0.347233 | 4.3:-14705177 | MS.gene08655:CDS |
| AAGGAATGCCCTTGTATAAA+GGG | 0.349792 | 4.3:-14695230 | MS.gene08655:CDS |
| ACAAATTTGGGATGGGTGAT+AGG | 0.352478 | 4.3:-14697264 | MS.gene08655:CDS |
| TTCAATTCATTGGCTTCAAC+AGG | 0.353696 | 4.3:+14706128 | None:intergenic |
| CTGCTATTGACGTTCAAGTT+GGG | 0.355743 | 4.3:-14697305 | MS.gene08655:CDS |
| TATTGCTGGCCGACAAATTT+GGG | 0.362824 | 4.3:-14697276 | MS.gene08655:CDS |
| TTCCAAGCTTAGTGAAATCT+TGG | 0.364156 | 4.3:-14696220 | MS.gene08655:CDS |
| TACTCGATGTATGGAGGGCT+TGG | 0.372642 | 4.3:-14696192 | MS.gene08655:CDS |
| GATGTATCTAAAATGCAATT+TGG | 0.379893 | 4.3:+14705216 | None:intergenic |
| CACCAACATGGGGTGTTTCA+TGG | 0.387943 | 4.3:-14705814 | MS.gene08655:CDS |
| TTCCAAGATTTCACTAAGCT+TGG | 0.392624 | 4.3:+14696218 | None:intergenic |
| GGGACTTCCCGTAATGTAAC+TGG | 0.392704 | 4.3:+14695971 | None:intergenic |
| AAAAGAGGAAAACTAGTAAC+AGG | 0.401402 | 4.3:+14705747 | None:intergenic |
| CTCCAAAAGCTTGAGGCTGC+AGG | 0.403739 | 4.3:+14695949 | None:intergenic |
| CAAATGTTGATGATGATCTA+TGG | 0.419523 | 4.3:-14696055 | MS.gene08655:CDS |
| AATCCAATCATTGAATTATG+TGG | 0.424565 | 4.3:-14696011 | MS.gene08655:CDS |
| ACGACAGTATAGCCATTGTT+TGG | 0.425408 | 4.3:-14705095 | MS.gene08655:CDS |
| CTTGTATACTGCAGGTGTAC+TGG | 0.428408 | 4.3:-14705281 | MS.gene08655:intron |
| AAGTTGGGGATGTCTATTGC+TGG | 0.435452 | 4.3:-14697290 | MS.gene08655:CDS |
| CCATCAGCAGCACTTCGTAT+TGG | 0.435928 | 4.3:+14697333 | None:intergenic |
| GATCCCTCATTACCCTCCTC+AGG | 0.443183 | 4.3:+14694067 | None:intergenic |
| GCTTGCGTCCAGTTACATTA+CGG | 0.444712 | 4.3:-14695979 | MS.gene08655:CDS |
| ACTAGTAACAGGATCTTTGT+AGG | 0.446275 | 4.3:+14705758 | None:intergenic |
| GGTTTGTTAGGGTGGGAGCT+AGG | 0.447595 | 4.3:+14705120 | None:intergenic |
| GCCATTGTTTGGAGGGATGA+AGG | 0.449236 | 4.3:-14705084 | MS.gene08655:CDS |
| TACTGTCGTCTGGTTTGTTA+GGG | 0.449359 | 4.3:+14705109 | None:intergenic |
| CTTGCGTCCAGTTACATTAC+GGG | 0.455274 | 4.3:-14695978 | MS.gene08655:CDS |
| TAAGGGAACAAGACTTATCA+TGG | 0.464090 | 4.3:-14702782 | MS.gene08655:CDS |
| ACTAATATACTATTCTCATC+TGG | 0.465442 | 4.3:-14697516 | MS.gene08655:CDS |
| TTGGAAGAGTACTCGATGTA+TGG | 0.465523 | 4.3:-14696201 | MS.gene08655:CDS |
| GTCGTCTGGTTTGTTAGGGT+GGG | 0.466027 | 4.3:+14705113 | None:intergenic |
| AAATTGAGCGTGTATGTGAC+AGG | 0.466683 | 4.3:-14694458 | MS.gene08655:CDS |
| TCATGTTATTTCCAGGTTGG+TGG | 0.468194 | 4.3:-14704944 | MS.gene08655:intron |
| TGATGTAGCTGTACAATTAA+GGG | 0.475188 | 4.3:-14702799 | MS.gene08655:CDS |
| GTGATGGTGATCATTATAGA+TGG | 0.475516 | 4.3:+14705983 | None:intergenic |
| GATATAATCAAGAGAATGGT+TGG | 0.477992 | 4.3:-14694798 | MS.gene08655:CDS |
| TGTCGTCTGGTTTGTTAGGG+TGG | 0.479618 | 4.3:+14705112 | None:intergenic |
| ATCACCCATCCCAAATTTGT+CGG | 0.481973 | 4.3:+14697267 | None:intergenic |
| AGCACAGCATCAATGACAAC+TGG | 0.485665 | 4.3:-14695921 | MS.gene08655:CDS |
| TGCTATTGACGTTCAAGTTG+GGG | 0.485865 | 4.3:-14697304 | MS.gene08655:CDS |
| AATTGCAATTGCATCACCCT+TGG | 0.492471 | 4.3:+14704897 | None:intergenic |
| GAATCAATCGATTGATAGAC+TGG | 0.492587 | 4.3:+14697543 | None:intergenic |
| GCAACTCTTGCTTTGTACCA+TGG | 0.495276 | 4.3:-14697207 | MS.gene08655:CDS |
| GGAAGATGTTCGAGGAAACT+CGG | 0.500060 | 4.3:+14694098 | None:intergenic |
| GTGACCCAAAAGCTATTCCT+TGG | 0.502276 | 4.3:-14697368 | MS.gene08655:CDS |
| CTTCTGGAAGTCAGAGCTCC+AGG | 0.503923 | 4.3:-14702746 | MS.gene08655:intron |
| GGTGAGGATATGATGGTTTG+AGG | 0.504019 | 4.3:+14706030 | None:intergenic |
| TACGAAGTGCTGCTGATGGA+TGG | 0.504944 | 4.3:-14697329 | MS.gene08655:CDS |
| GTTCCTTGTGTTGGTGAAGT+GGG | 0.510523 | 4.3:-14695321 | MS.gene08655:CDS |
| GCTGATGACACCATGAATCT+TGG | 0.510564 | 4.3:-14694750 | MS.gene08655:CDS |
| ACTATGATTGTTCAGGATGC+AGG | 0.510990 | 4.3:-14696263 | MS.gene08655:intron |
| GTACTGGTCTCTTGTTCTAA+AGG | 0.511821 | 4.3:-14705265 | MS.gene08655:CDS |
| AGATACCTTCCCTTTATACA+AGG | 0.512979 | 4.3:+14695221 | None:intergenic |
| GGAAACCAATAAAGAGGAGG+AGG | 0.515269 | 4.3:+14705948 | None:intergenic |
| TGTGAAAACACCCTTTGCAT+TGG | 0.516919 | 4.3:+14704753 | None:intergenic |
| TCAGATGCTCCAAGAGAGAT+GGG | 0.517385 | 4.3:+14695291 | None:intergenic |
| GAAGATGTTCGAGGAAACTC+GGG | 0.518970 | 4.3:+14694099 | None:intergenic |
| GATGTATGGAGGGCTTGGAT+TGG | 0.521106 | 4.3:-14696187 | MS.gene08655:CDS |
| ATCAGATGCTCCAAGAGAGA+TGG | 0.521624 | 4.3:+14695290 | None:intergenic |
| AAATCCTGAGGAGGGTAATG+AGG | 0.524639 | 4.3:-14694071 | MS.gene08655:CDS |
| GGGTGTTTCATGGAAGCTCA+TGG | 0.524875 | 4.3:-14705804 | MS.gene08655:CDS |
| TGGAGATATAATCAAGAGAA+TGG | 0.526748 | 4.3:-14694802 | MS.gene08655:CDS |
| CTTTAAAGTAAACCTCATCA+TGG | 0.526934 | 4.3:+14695250 | None:intergenic |
| CACTCTCCTCAGCTGACACA+TGG | 0.531737 | 4.3:-14706076 | MS.gene08655:CDS |
| TCCAAAAGCTTGAGGCTGCA+GGG | 0.533247 | 4.3:+14695950 | None:intergenic |
| ATTTCATATCAGGAGGTGGC+AGG | 0.533709 | 4.3:-14703290 | MS.gene08655:CDS |
| CACCCTTTGCATTGGAAACG+CGG | 0.535243 | 4.3:+14704761 | None:intergenic |
| AACATTTGATGTTTCTCCAG+TGG | 0.538029 | 4.3:+14696070 | None:intergenic |
| GCTGCTATTGACGTTCAAGT+TGG | 0.538506 | 4.3:-14697306 | MS.gene08655:CDS |
| GCAGGAAAATCCCATTGTAC+AGG | 0.541427 | 4.3:-14703272 | MS.gene08655:intron |
| ACAGTATAGCCATTGTTTGG+AGG | 0.544343 | 4.3:-14705092 | MS.gene08655:CDS |
| ACAATGGCTATACTGTCGTC+TGG | 0.544381 | 4.3:+14705099 | None:intergenic |
| CAGGATTTCATATCAGGAGG+TGG | 0.545187 | 4.3:-14703294 | MS.gene08655:CDS |
| CAGTATAGCCATTGTTTGGA+GGG | 0.549309 | 4.3:-14705091 | MS.gene08655:CDS |
| AGTTCAAATGCAGAAACTCT+AGG | 0.549575 | 4.3:-14694334 | MS.gene08655:CDS |
| TAGCAGGTTCTTAGAAGACA+TGG | 0.550900 | 4.3:-14694822 | MS.gene08655:intron |
| CTATTCTCATCTGGAACCAC+AGG | 0.550967 | 4.3:-14697507 | MS.gene08655:intron |
| TGAGGACTCTGCGACTGACT+AGG | 0.552661 | 4.3:+14706048 | None:intergenic |
| AATGGCCAGATATATAATAA+CGG | 0.554063 | 4.3:+14704852 | None:intergenic |
| GCTATATCATTGTGCAAGGG+AGG | 0.554278 | 4.3:-14694773 | MS.gene08655:CDS |
| TAGTAGAGAAGCTGATGCAA+GGG | 0.555578 | 4.3:+14706008 | None:intergenic |
| CCAAAAGCTTGAGGCTGCAG+GGG | 0.557982 | 4.3:+14695951 | None:intergenic |
| GAGGAGAAGATGAAGAGTGA+TGG | 0.558467 | 4.3:+14705967 | None:intergenic |
| CCAGAAAATGTTCCTTGTGT+TGG | 0.560714 | 4.3:-14695330 | MS.gene08655:CDS |
| GCAAGCAAGACGCACCAACA+TGG | 0.561263 | 4.3:-14705826 | MS.gene08655:CDS |
| AGAAGCTGATGCAAGGGGTG+AGG | 0.561901 | 4.3:+14706014 | None:intergenic |
| CTCCGCGTTTCCAATGCAAA+GGG | 0.562738 | 4.3:-14704763 | MS.gene08655:CDS |
| AATCCTGAGGAGGGTAATGA+GGG | 0.564835 | 4.3:-14694070 | MS.gene08655:CDS |
| GCAATATTGAGGACAGAACC+AGG | 0.565046 | 4.3:+14705159 | None:intergenic |
| ACGAAGTGCTGCTGATGGAT+GGG | 0.566192 | 4.3:-14697328 | MS.gene08655:CDS |
| AGAGAAGGAAACCAATAAAG+AGG | 0.566750 | 4.3:+14705942 | None:intergenic |
| GTATCTAAAATGCAATTTGG+AGG | 0.568095 | 4.3:+14705219 | None:intergenic |
| AACAACAGTCAGCAATATTG+AGG | 0.568992 | 4.3:+14705148 | None:intergenic |
| ATCAGCAGCACTTCGTATTG+GGG | 0.570807 | 4.3:+14697335 | None:intergenic |
| CAAGCAAGACGCACCAACAT+GGG | 0.572540 | 4.3:-14705825 | MS.gene08655:CDS |
| AAAGTAAACCTCATCATGGT+CGG | 0.573356 | 4.3:+14695254 | None:intergenic |
| ACTCCGCGTTTCCAATGCAA+AGG | 0.573666 | 4.3:-14704764 | MS.gene08655:CDS |
| CATGGATCTCCTCAAGGCCA+TGG | 0.575075 | 4.3:-14697189 | MS.gene08655:CDS |
| TGTTCCTTGTGTTGGTGAAG+TGG | 0.576111 | 4.3:-14695322 | MS.gene08655:CDS |
| TCTTCCTACCCTTCAAAACA+TGG | 0.576214 | 4.3:-14705195 | MS.gene08655:CDS |
| GATGACACCATGAATCTTGG+TGG | 0.576878 | 4.3:-14694747 | MS.gene08655:CDS |
| GGTGGCTATATCATTGTGCA+AGG | 0.577405 | 4.3:-14694777 | MS.gene08655:CDS |
| GCTACATCATCACCTATCGC+AGG | 0.579555 | 4.3:+14702813 | None:intergenic |
| ATAGTAGAGAAGCTGATGCA+AGG | 0.587281 | 4.3:+14706007 | None:intergenic |
| CTTCAAAACATGGAGGAACA+TGG | 0.588514 | 4.3:-14705185 | MS.gene08655:CDS |
| GCTGGCCGACAAATTTGGGA+TGG | 0.589078 | 4.3:-14697272 | MS.gene08655:CDS |
| AAGCAGTGATATAACAGAGT+AGG | 0.589883 | 4.3:+14697240 | None:intergenic |
| TGCAATTGACATGCAAATGA+CGG | 0.590007 | 4.3:-14704881 | MS.gene08655:CDS |
| TTCCCAAAACCATGGCCTTG+AGG | 0.591486 | 4.3:+14697180 | None:intergenic |
| CTGAATGCTCCAAAAGCTTG+AGG | 0.592552 | 4.3:+14695942 | None:intergenic |
| GAAGAGTACTCGATGTATGG+AGG | 0.593996 | 4.3:-14696198 | MS.gene08655:CDS |
| TTCCAACAAAATCCTGAGGA+GGG | 0.594371 | 4.3:-14694079 | MS.gene08655:CDS |
| CCAATACGAAGTGCTGCTGA+TGG | 0.596120 | 4.3:-14697333 | MS.gene08655:CDS |
| TTTCAGGATTTCATATCAGG+AGG | 0.598630 | 4.3:-14703297 | MS.gene08655:intron |
| CTGGCCGACAAATTTGGGAT+GGG | 0.599613 | 4.3:-14697271 | MS.gene08655:CDS |
| AACACATCCAGCTAAAACAA+TGG | 0.600477 | 4.3:+14704834 | None:intergenic |
| AATGCCCTTGTATAAAGGGA+AGG | 0.602985 | 4.3:-14695226 | MS.gene08655:intron |
| AGATTTCACTAAGCTTGGAA+CGG | 0.603067 | 4.3:+14696223 | None:intergenic |
| CTATATCATTGTGCAAGGGA+GGG | 0.603945 | 4.3:-14694772 | MS.gene08655:CDS |
| GTTATTGTGCTCCCTGCGAT+AGG | 0.604277 | 4.3:-14702825 | MS.gene08655:CDS |
| TTTGTCATTCTTGACGACAA+TGG | 0.604567 | 4.3:-14695897 | MS.gene08655:CDS |
| ATTGGGGCAAGTTGAGTCCA+AGG | 0.604685 | 4.3:+14697351 | None:intergenic |
| TGCAAGGGGTGAGGATATGA+TGG | 0.605952 | 4.3:+14706023 | None:intergenic |
| GAAGGAAACCAATAAAGAGG+AGG | 0.611432 | 4.3:+14705945 | None:intergenic |
| GGACCTTAAACAAAGGATTG+AGG | 0.611864 | 4.3:+14694282 | None:intergenic |
| GAGAGTGATATGATTAACCT+CGG | 0.612081 | 4.3:+14705050 | None:intergenic |
| TTGTACCATGGATCTCCTCA+AGG | 0.614255 | 4.3:-14697195 | MS.gene08655:CDS |
| ACCTTCATCCCTCCAAACAA+TGG | 0.614707 | 4.3:+14705083 | None:intergenic |
| TTCCATGAAACACCCCATGT+TGG | 0.618606 | 4.3:+14705812 | None:intergenic |
| TGTGTCAGCTGAGGAGAGTG+AGG | 0.619809 | 4.3:+14706079 | None:intergenic |
| CTTCCAACAAAATCCTGAGG+AGG | 0.619824 | 4.3:-14694080 | MS.gene08655:CDS |
| ATGAGAGTGACTTACAGAGA+AGG | 0.620146 | 4.3:+14705927 | None:intergenic |
| TCTTTGCAGTCGAGTCATTG+AGG | 0.621680 | 4.3:-14702862 | MS.gene08655:intron |
| CCAATCATTGAATTATGTGG+AGG | 0.624312 | 4.3:-14696008 | MS.gene08655:CDS |
| ATAGATGCCAATTTCTCCAA+GGG | 0.625023 | 4.3:-14704913 | MS.gene08655:CDS |
| AATAGATGCCAATTTCTCCA+AGG | 0.627081 | 4.3:-14704914 | MS.gene08655:CDS |
| CATGGCCTTGAGGAGATCCA+TGG | 0.627745 | 4.3:+14697190 | None:intergenic |
| AAGGGTCGGACCTTAAACAA+AGG | 0.631189 | 4.3:+14694275 | None:intergenic |
| GAACAAATTTCCCAAAACCA+TGG | 0.631785 | 4.3:+14697172 | None:intergenic |
| GGTGTTGCAACTGAAAATAG+GGG | 0.634076 | 4.3:-14694402 | MS.gene08655:intron |
| GCAATTTGGAGGTTGAACAA+AGG | 0.636247 | 4.3:+14705230 | None:intergenic |
| AAGAGTACTCGATGTATGGA+GGG | 0.637862 | 4.3:-14696197 | MS.gene08655:CDS |
| GATACCTTCCCTTTATACAA+GGG | 0.639248 | 4.3:+14695222 | None:intergenic |
| AGTAACAGGATCTTTGTAGG+AGG | 0.639471 | 4.3:+14705761 | None:intergenic |
| ATTGGAAACGCGGAGTCGAG+TGG | 0.640312 | 4.3:+14704771 | None:intergenic |
| CTACATCATCACCTATCGCA+GGG | 0.643107 | 4.3:+14702814 | None:intergenic |
| GCTGAATGCCGACCATGATG+AGG | 0.659320 | 4.3:-14695262 | MS.gene08655:CDS |
| ATAATCAAGAGAATGGTTGG+TGG | 0.659430 | 4.3:-14694795 | MS.gene08655:CDS |
| GTGGCGCCATGTGTCAGCTG+AGG | 0.663062 | 4.3:+14706070 | None:intergenic |
| GCTGAGGAGAGTGAGGACAA+TGG | 0.675338 | 4.3:+14706086 | None:intergenic |
| AGTAGAGAAGCTGATGCAAG+GGG | 0.677883 | 4.3:+14706009 | None:intergenic |
| GTGGCTATATCATTGTGCAA+GGG | 0.681013 | 4.3:-14694776 | MS.gene08655:CDS |
| AAACCCACTTCACCAACACA+AGG | 0.689168 | 4.3:+14695318 | None:intergenic |
| GGACTCTGCGACTGACTAGG+TGG | 0.697715 | 4.3:+14706051 | None:intergenic |
| CATCTTCCAACAAAATCCTG+AGG | 0.697941 | 4.3:-14694083 | MS.gene08655:CDS |
| AAGCAAGACGCACCAACATG+GGG | 0.708520 | 4.3:-14705824 | MS.gene08655:CDS |
| TCCTACCCTTCAAAACATGG+AGG | 0.723423 | 4.3:-14705192 | MS.gene08655:CDS |
| CTTCTCTGTTCAACACCCCG+AGG | 0.726098 | 4.3:-14705718 | MS.gene08655:intron |
| CAGATGCTCCAAGAGAGATG+GGG | 0.737772 | 4.3:+14695292 | None:intergenic |
| AATTGAGCGTGTATGTGACA+GGG | 0.741241 | 4.3:-14694457 | MS.gene08655:CDS |
| TGAAGGTTCTGATAACTCCG+AGG | 0.744320 | 4.3:-14705067 | MS.gene08655:CDS |
| AAGATGTTCGAGGAAACTCG+GGG | 0.765970 | 4.3:+14694100 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 14694029 | 14706210 | 14694029 | ID=MS.gene08655 |
| chr4.3 | mRNA | 14694029 | 14706210 | 14694029 | ID=MS.gene08655.t1;Parent=MS.gene08655 |
| chr4.3 | exon | 14705942 | 14706210 | 14705942 | ID=MS.gene08655.t1.exon1;Parent=MS.gene08655.t1 |
| chr4.3 | CDS | 14705942 | 14706210 | 14705942 | ID=cds.MS.gene08655.t1;Parent=MS.gene08655.t1 |
| chr4.3 | exon | 14705719 | 14705851 | 14705719 | ID=MS.gene08655.t1.exon2;Parent=MS.gene08655.t1 |
| chr4.3 | CDS | 14705719 | 14705851 | 14705719 | ID=cds.MS.gene08655.t1;Parent=MS.gene08655.t1 |
| chr4.3 | exon | 14705027 | 14705289 | 14705027 | ID=MS.gene08655.t1.exon3;Parent=MS.gene08655.t1 |
| chr4.3 | CDS | 14705027 | 14705289 | 14705027 | ID=cds.MS.gene08655.t1;Parent=MS.gene08655.t1 |
| chr4.3 | exon | 14704750 | 14704951 | 14704750 | ID=MS.gene08655.t1.exon4;Parent=MS.gene08655.t1 |
| chr4.3 | CDS | 14704750 | 14704951 | 14704750 | ID=cds.MS.gene08655.t1;Parent=MS.gene08655.t1 |
| chr4.3 | exon | 14703273 | 14703313 | 14703273 | ID=MS.gene08655.t1.exon5;Parent=MS.gene08655.t1 |
| chr4.3 | CDS | 14703273 | 14703313 | 14703273 | ID=cds.MS.gene08655.t1;Parent=MS.gene08655.t1 |
| chr4.3 | exon | 14702747 | 14702875 | 14702747 | ID=MS.gene08655.t1.exon6;Parent=MS.gene08655.t1 |
| chr4.3 | CDS | 14702747 | 14702875 | 14702747 | ID=cds.MS.gene08655.t1;Parent=MS.gene08655.t1 |
| chr4.3 | exon | 14697508 | 14697581 | 14697508 | ID=MS.gene08655.t1.exon7;Parent=MS.gene08655.t1 |
| chr4.3 | CDS | 14697508 | 14697581 | 14697508 | ID=cds.MS.gene08655.t1;Parent=MS.gene08655.t1 |
| chr4.3 | exon | 14697170 | 14697390 | 14697170 | ID=MS.gene08655.t1.exon8;Parent=MS.gene08655.t1 |
| chr4.3 | CDS | 14697170 | 14697390 | 14697170 | ID=cds.MS.gene08655.t1;Parent=MS.gene08655.t1 |
| chr4.3 | exon | 14696176 | 14696270 | 14696176 | ID=MS.gene08655.t1.exon9;Parent=MS.gene08655.t1 |
| chr4.3 | CDS | 14696176 | 14696270 | 14696176 | ID=cds.MS.gene08655.t1;Parent=MS.gene08655.t1 |
| chr4.3 | exon | 14695887 | 14696103 | 14695887 | ID=MS.gene08655.t1.exon10;Parent=MS.gene08655.t1 |
| chr4.3 | CDS | 14695887 | 14696103 | 14695887 | ID=cds.MS.gene08655.t1;Parent=MS.gene08655.t1 |
| chr4.3 | exon | 14695227 | 14695352 | 14695227 | ID=MS.gene08655.t1.exon11;Parent=MS.gene08655.t1 |
| chr4.3 | CDS | 14695227 | 14695352 | 14695227 | ID=cds.MS.gene08655.t1;Parent=MS.gene08655.t1 |
| chr4.3 | exon | 14694740 | 14694838 | 14694740 | ID=MS.gene08655.t1.exon12;Parent=MS.gene08655.t1 |
| chr4.3 | CDS | 14694740 | 14694838 | 14694740 | ID=cds.MS.gene08655.t1;Parent=MS.gene08655.t1 |
| chr4.3 | exon | 14694403 | 14694493 | 14694403 | ID=MS.gene08655.t1.exon13;Parent=MS.gene08655.t1 |
| chr4.3 | CDS | 14694403 | 14694493 | 14694403 | ID=cds.MS.gene08655.t1;Parent=MS.gene08655.t1 |
| chr4.3 | exon | 14694286 | 14694365 | 14694286 | ID=MS.gene08655.t1.exon14;Parent=MS.gene08655.t1 |
| chr4.3 | CDS | 14694286 | 14694365 | 14694286 | ID=cds.MS.gene08655.t1;Parent=MS.gene08655.t1 |
| chr4.3 | exon | 14694029 | 14694142 | 14694029 | ID=MS.gene08655.t1.exon15;Parent=MS.gene08655.t1 |
| chr4.3 | CDS | 14694029 | 14694142 | 14694029 | ID=cds.MS.gene08655.t1;Parent=MS.gene08655.t1 |
| Gene Sequence |
| Protein sequence |
