Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045801.t1 | XP_013463987.1 | 97.4 | 726 | 19 | 0 | 1 | 726 | 1 | 726 | 0.00E+00 | 1433.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045801.t1 | F4KBF3 | 68.4 | 727 | 223 | 3 | 1 | 726 | 1 | 721 | 8.2e-299 | 1027.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045801.t1 | A0A072V870 | 97.4 | 726 | 19 | 0 | 1 | 726 | 1 | 726 | 0.0e+00 | 1433.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene045801 | MS.gene049882 | PPI |
MS.gene045801 | MS.gene92059 | PPI |
MS.gene045801 | MS.gene023555 | PPI |
MS.gene045801 | MS.gene023528 | PPI |
MS.gene045801 | MS.gene09070 | PPI |
MS.gene045801 | MS.gene019120 | PPI |
MS.gene045801 | MS.gene08655 | PPI |
MS.gene46997 | MS.gene045801 | PPI |
MS.gene045801 | MS.gene08927 | PPI |
MS.gene045801 | MS.gene08775 | PPI |
MS.gene22255 | MS.gene045801 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045801.t1 | MTR_2g056120 | 97.383 | 726 | 19 | 0 | 1 | 726 | 1 | 726 | 0.0 | 1465 |
MS.gene045801.t1 | MTR_8g085680 | 51.029 | 729 | 340 | 9 | 1 | 720 | 1 | 721 | 0.0 | 725 |
MS.gene045801.t1 | MTR_8g086050 | 50.204 | 735 | 338 | 9 | 1 | 720 | 1 | 722 | 0.0 | 702 |
MS.gene045801.t1 | MTR_8g085680 | 51.000 | 700 | 326 | 9 | 1 | 691 | 1 | 692 | 0.0 | 692 |
MS.gene045801.t1 | MTR_8g086050 | 50.316 | 632 | 294 | 7 | 1 | 620 | 1 | 624 | 0.0 | 602 |
MS.gene045801.t1 | MTR_8g086050 | 48.997 | 598 | 287 | 7 | 1 | 587 | 1 | 591 | 0.0 | 555 |
MS.gene045801.t1 | MTR_8g085680 | 50.000 | 552 | 261 | 8 | 1 | 543 | 1 | 546 | 1.45e-178 | 523 |
MS.gene045801.t1 | MTR_7g084850 | 25.514 | 584 | 384 | 20 | 166 | 720 | 162 | 723 | 1.95e-34 | 140 |
MS.gene045801.t1 | MTR_1g063110 | 23.473 | 524 | 344 | 19 | 208 | 713 | 56 | 540 | 7.94e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene045801.t1 | AT5G23050 | 68.363 | 727 | 223 | 3 | 1 | 726 | 1 | 721 | 0.0 | 1020 |
MS.gene045801.t1 | AT5G23050 | 68.305 | 590 | 180 | 3 | 1 | 589 | 1 | 584 | 0.0 | 818 |
MS.gene045801.t1 | AT1G55320 | 48.697 | 729 | 352 | 9 | 3 | 720 | 2 | 719 | 0.0 | 699 |
MS.gene045801.t1 | AT1G55320 | 55.159 | 504 | 222 | 3 | 219 | 720 | 2 | 503 | 0.0 | 566 |
MS.gene045801.t1 | AT5G36880 | 25.116 | 649 | 430 | 22 | 102 | 720 | 96 | 718 | 2.31e-34 | 140 |
MS.gene045801.t1 | AT5G36880 | 25.116 | 649 | 430 | 22 | 102 | 720 | 46 | 668 | 2.88e-34 | 140 |
MS.gene045801.t1 | AT5G36880 | 25.116 | 649 | 430 | 22 | 102 | 720 | 46 | 668 | 2.88e-34 | 140 |
MS.gene045801.t1 | AT5G36880 | 25.116 | 649 | 430 | 22 | 102 | 720 | 46 | 668 | 2.88e-34 | 140 |
MS.gene045801.t1 | AT5G36880 | 25.116 | 649 | 430 | 22 | 102 | 720 | 46 | 668 | 2.88e-34 | 140 |
MS.gene045801.t1 | AT5G36880 | 25.480 | 573 | 375 | 21 | 102 | 644 | 46 | 596 | 5.91e-28 | 120 |
Find 189 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGAGGGGTAAAGAGTTTC+TGG | 0.130757 | 2.1:-36154510 | MS.gene045801:CDS |
GTTTCATACCTGTACAAATT+TGG | 0.172757 | 2.1:+36149087 | None:intergenic |
GGTTTGAGACTGAAAATTTC+TGG | 0.177813 | 2.1:+36154447 | None:intergenic |
TTGTATTGTTTCAGGTTTAT+TGG | 0.214001 | 2.1:-36154339 | MS.gene045801:intron |
TATGGTTGCTTCAAAGATTA+TGG | 0.245998 | 2.1:-36155419 | MS.gene045801:CDS |
AAACTCTAAATCCATTATTC+AGG | 0.260045 | 2.1:-36146105 | MS.gene045801:CDS |
CTCTTGGATCCCTTATGCTT+GGG | 0.260664 | 2.1:-36147055 | MS.gene045801:CDS |
GTTTCTGGGTTCACTGTATA+AGG | 0.284467 | 2.1:-36154495 | MS.gene045801:CDS |
GCTTCAATGGCTTTGTATAA+TGG | 0.284939 | 2.1:-36149133 | MS.gene045801:CDS |
AAATCAGCAAAGCCTGTAAT+TGG | 0.298240 | 2.1:+36154470 | None:intergenic |
TTGGTCCATGGAATTGCTTT+TGG | 0.305055 | 2.1:+36149289 | None:intergenic |
CCAAGTGGTCAATGGCTTCC+TGG | 0.309999 | 2.1:-36154223 | MS.gene045801:CDS |
CTGTATAAGGATCCAATTAC+AGG | 0.315621 | 2.1:-36154482 | MS.gene045801:CDS |
TTTCATCAGATGCTGTATTA+TGG | 0.322063 | 2.1:-36155437 | MS.gene045801:CDS |
ATAAAGCCCTCCCTCTTTAC+AGG | 0.326956 | 2.1:-36149982 | MS.gene045801:intron |
TACCTAGCTATCGTTCTTGC+AGG | 0.327370 | 2.1:-36151862 | MS.gene045801:CDS |
GGTATCCAAGCGGGCGGGTC+AGG | 0.332425 | 2.1:+36155395 | None:intergenic |
TTAATAAGTACCCTGAATAA+TGG | 0.347220 | 2.1:+36146094 | None:intergenic |
GTATATGCATCATTGTTAAA+TGG | 0.350280 | 2.1:-36149157 | MS.gene045801:CDS |
TGCGTAACGGTGACCTTTCA+TGG | 0.358514 | 2.1:-36149780 | MS.gene045801:CDS |
TGAATGACACGGTGATAATA+TGG | 0.360894 | 2.1:-36154147 | MS.gene045801:CDS |
GCTCTTGGATCCCTTATGCT+TGG | 0.362666 | 2.1:-36147056 | MS.gene045801:CDS |
TTGTCACGTAAGATGCATTC+AGG | 0.363220 | 2.1:+36154274 | None:intergenic |
CTGCTGAATGCTGATCATTA+TGG | 0.368454 | 2.1:-36147020 | MS.gene045801:CDS |
CCACAAAATGTTCCAGGAAT+AGG | 0.388472 | 2.1:-36147086 | MS.gene045801:CDS |
CCTTCTCATAACCTTGTTTG+AGG | 0.389200 | 2.1:+36145961 | None:intergenic |
TGCGTATGCTCTTGAATCAC+TGG | 0.389707 | 2.1:-36151947 | MS.gene045801:CDS |
TGAAACGAAAACGGAAGTTC+AGG | 0.392374 | 2.1:+36155455 | None:intergenic |
TTGTTTATTCTTGCTGATGA+TGG | 0.394278 | 2.1:-36147459 | MS.gene045801:CDS |
ATTGTTAAATGGAGCTTCAA+TGG | 0.395832 | 2.1:-36149146 | MS.gene045801:CDS |
CCACCACAATATTCAATGAT+AGG | 0.395928 | 2.1:+36147570 | None:intergenic |
TGCTCTTGAATCACTGGGTC+TGG | 0.402184 | 2.1:-36151941 | MS.gene045801:CDS |
ATTTCAAGGGAATGCCTCTC+TGG | 0.405496 | 2.1:-36146992 | MS.gene045801:CDS |
GTTTGCTGGCCCACTAATCT+TGG | 0.407233 | 2.1:-36149202 | MS.gene045801:CDS |
AACTATTGCCATAGGAGATT+GGG | 0.409276 | 2.1:+36149837 | None:intergenic |
CACTAATCTTGGATGGATGA+TGG | 0.410831 | 2.1:-36149191 | MS.gene045801:CDS |
AGAGCTAACTCACCTATTCC+TGG | 0.415085 | 2.1:+36147074 | None:intergenic |
CAGAATTGCTTGAATTTGAA+TGG | 0.415404 | 2.1:-36154181 | MS.gene045801:CDS |
CTCCAGCTCCGTACAAGACT+TGG | 0.417401 | 2.1:+36147813 | None:intergenic |
AGGAATTGCGTCAAGAGGTT+TGG | 0.417698 | 2.1:-36154078 | MS.gene045801:intron |
TAACTATTGCCATAGGAGAT+TGG | 0.426580 | 2.1:+36149836 | None:intergenic |
TGTTTGATGCCCCAAGCATA+AGG | 0.427358 | 2.1:+36147045 | None:intergenic |
TCATTATGGTGTCTATTTCA+AGG | 0.428112 | 2.1:-36147006 | MS.gene045801:CDS |
ATTGTGGTGGTACAGAGATT+GGG | 0.434744 | 2.1:-36147557 | MS.gene045801:CDS |
TATTGTGGTGGTACAGAGAT+TGG | 0.435937 | 2.1:-36147558 | MS.gene045801:CDS |
GCCATCGGGATACCACCTTC+TGG | 0.438657 | 2.1:-36146232 | MS.gene045801:CDS |
ACGGAATTAATAGAAATTCA+TGG | 0.438816 | 2.1:-36155527 | MS.gene045801:CDS |
CCAGGAAGCCATTGACCACT+TGG | 0.443223 | 2.1:+36154223 | None:intergenic |
ACTAATCTTGGATGGATGAT+GGG | 0.444823 | 2.1:-36149190 | MS.gene045801:CDS |
ACGCAGTTGCATGCTGAATC+CGG | 0.445166 | 2.1:+36149798 | None:intergenic |
AATTCCAAGGGATTCAATAT+CGG | 0.447053 | 2.1:+36155586 | None:intergenic |
GCAGATGATACAATGAATCT+TGG | 0.448260 | 2.1:-36146823 | MS.gene045801:CDS |
ACCACAGATGTACAATTCAT+TGG | 0.450525 | 2.1:+36151889 | None:intergenic |
CGGCTTTGCCAAATTTGTAC+AGG | 0.453722 | 2.1:-36149095 | MS.gene045801:intron |
ATTCTACATCCGGCTATGAT+TGG | 0.455503 | 2.1:-36147782 | MS.gene045801:CDS |
TTACAGCCACAAAATGTTCC+AGG | 0.457728 | 2.1:-36147092 | MS.gene045801:intron |
GTAAAGGTGATGTAGTTTGC+TGG | 0.460233 | 2.1:-36149216 | MS.gene045801:CDS |
CACAAGATTTACAGAAATTG+AGG | 0.460742 | 2.1:-36146153 | MS.gene045801:CDS |
ACCTTGTTTGAGGCTGTCCT+TGG | 0.462874 | 2.1:+36145971 | None:intergenic |
CCATTGACCACTTGGGTATG+AGG | 0.465477 | 2.1:+36154231 | None:intergenic |
TTCCAAGTCTTGTACGGAGC+TGG | 0.467703 | 2.1:-36147815 | MS.gene045801:CDS |
CGTAGTTGCTTTGCATCCAC+TGG | 0.469596 | 2.1:-36147648 | MS.gene045801:intron |
ATGGTCCTGACCCGCCCGCT+TGG | 0.470246 | 2.1:-36155400 | MS.gene045801:CDS |
AACTCTAAATCCATTATTCA+GGG | 0.476877 | 2.1:-36146104 | MS.gene045801:intron |
ATTACTGCAGGCTCAGTCAT+TGG | 0.477853 | 2.1:-36147514 | MS.gene045801:CDS |
AACAAATTGCAGCACATCGC+CGG | 0.479445 | 2.1:+36147477 | None:intergenic |
AAATTCAAGCAATTCTGTGC+AGG | 0.479919 | 2.1:+36154187 | None:intergenic |
TGCAGATGCGTGGTGCCACT+TGG | 0.483354 | 2.1:-36149245 | MS.gene045801:CDS |
GTTGTTTCGATAGGTGAGTT+CGG | 0.483788 | 2.1:-36146308 | MS.gene045801:intron |
GCTATGATTGGTCTGCTATC+CGG | 0.484099 | 2.1:-36147770 | MS.gene045801:intron |
CTGAATCCGGAGCCTCTAGT+TGG | 0.485876 | 2.1:+36149811 | None:intergenic |
TGCAAAAGTCATATTTACTC+AGG | 0.486038 | 2.1:-36151770 | MS.gene045801:intron |
CGAACGTAGATGAATACCTT+TGG | 0.486204 | 2.1:-36147617 | MS.gene045801:CDS |
CTCAATTTCTGTAAATCTTG+TGG | 0.487036 | 2.1:+36146154 | None:intergenic |
TCGGGATACCACCTTCTGGT+GGG | 0.487293 | 2.1:-36146228 | MS.gene045801:CDS |
TACGGGTCGGGTATCCAAGC+GGG | 0.487626 | 2.1:+36155386 | None:intergenic |
TTGTATAATGGATCCCCACT+TGG | 0.489785 | 2.1:-36149121 | MS.gene045801:CDS |
GAATCACTGGGTCTGGAGAA+AGG | 0.491276 | 2.1:-36151934 | MS.gene045801:CDS |
GGTTTATTGGAAAACTGTGC+TGG | 0.493042 | 2.1:-36154326 | MS.gene045801:CDS |
TTGTGGAAACAGCTGCCATC+GGG | 0.497471 | 2.1:-36146246 | MS.gene045801:CDS |
CTGTACAAATTTGGCAAAGC+CGG | 0.498742 | 2.1:+36149096 | None:intergenic |
GTATCCGATATTGAATCCCT+TGG | 0.499341 | 2.1:-36155590 | MS.gene045801:CDS |
AATGAATCTTGGAGGAATCA+AGG | 0.499716 | 2.1:-36146812 | MS.gene045801:intron |
GGAATAGGTGAGTTAGCTCT+TGG | 0.500136 | 2.1:-36147071 | MS.gene045801:CDS |
ATGTTTGTAAATGTTTCTAC+TGG | 0.500526 | 2.1:+36149496 | None:intergenic |
AATGGATCCCCACTTGGCTC+CGG | 0.500651 | 2.1:-36149115 | MS.gene045801:CDS |
ATCGGGATACCACCTTCTGG+TGG | 0.501807 | 2.1:-36146229 | MS.gene045801:CDS |
CATTATGGTGTCTATTTCAA+GGG | 0.501919 | 2.1:-36147005 | MS.gene045801:CDS |
AAGGGAATGCCTCTCTGGAA+TGG | 0.502368 | 2.1:-36146987 | MS.gene045801:CDS |
GATGAATACCTTTGGCTGAT+GGG | 0.504710 | 2.1:-36147609 | MS.gene045801:CDS |
AGATGAATACCTTTGGCTGA+TGG | 0.505224 | 2.1:-36147610 | MS.gene045801:CDS |
AGAAATGCAAATTCTACATC+CGG | 0.506535 | 2.1:-36147792 | MS.gene045801:CDS |
GTTATCCCAACTAGAGGCTC+CGG | 0.511622 | 2.1:-36149817 | MS.gene045801:CDS |
AGCATCTGATGAAACGAAAA+CGG | 0.513623 | 2.1:+36155446 | None:intergenic |
GCTGGCCCACTAATCTTGGA+TGG | 0.513777 | 2.1:-36149198 | MS.gene045801:CDS |
CCTCATACCCAAGTGGTCAA+TGG | 0.513890 | 2.1:-36154231 | MS.gene045801:CDS |
GTTAAGAGAGCATACGGGTC+GGG | 0.514536 | 2.1:+36155374 | None:intergenic |
CGGGATACCACCTTCTGGTG+GGG | 0.515510 | 2.1:-36146227 | MS.gene045801:CDS |
AAGAGGGGTAAAGAGTTTCT+GGG | 0.520650 | 2.1:-36154509 | MS.gene045801:CDS |
GTGTGATTCCAAGTCTTGTA+CGG | 0.520853 | 2.1:-36147821 | MS.gene045801:CDS |
CGGAGTAGATAGTAATATTG+TGG | 0.522745 | 2.1:-36146263 | MS.gene045801:CDS |
AGTGTTACATTGACGAATGT+TGG | 0.524475 | 2.1:-36154545 | MS.gene045801:CDS |
TTGTGGTGGTACAGAGATTG+GGG | 0.524936 | 2.1:-36147556 | MS.gene045801:CDS |
TGAATCCGGAGCCTCTAGTT+GGG | 0.525577 | 2.1:+36149812 | None:intergenic |
GATGCTAAAGTAACAATGCT+TGG | 0.525722 | 2.1:-36147843 | MS.gene045801:CDS |
TGTTTATTCTTGCTGATGAT+GGG | 0.526507 | 2.1:-36147458 | MS.gene045801:CDS |
CATCATCCATCCAAGATTAG+TGG | 0.527349 | 2.1:+36149192 | None:intergenic |
CGTGGTCTCTCGCAATTCCA+AGG | 0.529030 | 2.1:+36155573 | None:intergenic |
TGGTCGGTTGCTTGAGAAGA+GGG | 0.529807 | 2.1:-36154525 | MS.gene045801:CDS |
AACTCTCCACCTGCGTCTCA+CGG | 0.534211 | 2.1:-36155546 | MS.gene045801:CDS |
CTCAAACAAGGTTATGAGAA+GGG | 0.538467 | 2.1:-36145960 | MS.gene045801:CDS |
GGGATACCACCTTCTGGTGG+GGG | 0.539711 | 2.1:-36146226 | MS.gene045801:CDS |
AAGCCTATCATTGAATATTG+TGG | 0.541124 | 2.1:-36147573 | MS.gene045801:CDS |
GAAACGAAAACGGAAGTTCA+GGG | 0.542308 | 2.1:+36155456 | None:intergenic |
TCTTGGATCCCTTATGCTTG+GGG | 0.542370 | 2.1:-36147054 | MS.gene045801:CDS |
TGTGGATGCCCAATCTCCTA+TGG | 0.543453 | 2.1:-36149845 | MS.gene045801:CDS |
CTATTAATTCCGTGAGACGC+AGG | 0.543711 | 2.1:+36155537 | None:intergenic |
GAGGATGAACCGTCCTCACC+AGG | 0.544024 | 2.1:+36154250 | None:intergenic |
TGGCGCAAAACTATCAGCTA+TGG | 0.551994 | 2.1:+36151825 | None:intergenic |
GGATACAGAGATAGAAGATA+AGG | 0.552282 | 2.1:+36155607 | None:intergenic |
GATGATACAATGAATCTTGG+AGG | 0.554940 | 2.1:-36146820 | MS.gene045801:CDS |
GAGGCTGTCCTTGGAAGAGA+TGG | 0.555835 | 2.1:+36145980 | None:intergenic |
GGTCGGGTATCCAAGCGGGC+GGG | 0.559168 | 2.1:+36155390 | None:intergenic |
TGGCAAAGCCGGAGCCAAGT+GGG | 0.563691 | 2.1:+36149107 | None:intergenic |
GTGATCCAAAAGCAATTCCA+TGG | 0.566214 | 2.1:-36149294 | MS.gene045801:CDS |
TGTCAGGATCTCATACTTCG+TGG | 0.566472 | 2.1:-36150007 | MS.gene045801:intron |
CGTCACTGGATCATTACTGC+AGG | 0.568727 | 2.1:-36147526 | MS.gene045801:CDS |
TTGGATGGATGATGGGGCCA+TGG | 0.568895 | 2.1:-36149183 | MS.gene045801:CDS |
AGAGGAGTAATATTGGTCCA+TGG | 0.570021 | 2.1:+36149277 | None:intergenic |
ATCATCCATCCAAGATTAGT+GGG | 0.571504 | 2.1:+36149193 | None:intergenic |
ACAGCTACAGACAACTGCTC+AGG | 0.571958 | 2.1:+36146202 | None:intergenic |
GCAGGATTAATCGATGCTCC+AGG | 0.573116 | 2.1:+36154205 | None:intergenic |
TGCCACTTGGACGTTCGTAA+AGG | 0.578559 | 2.1:-36149232 | MS.gene045801:CDS |
TACGTTCGATGCTTCTCCAG+TGG | 0.579680 | 2.1:+36147632 | None:intergenic |
AAGATGGTCTCCCTCTTCAA+AGG | 0.580818 | 2.1:-36154111 | MS.gene045801:CDS |
AAAACGGAAGTTCAGGGCTG+AGG | 0.582396 | 2.1:+36155462 | None:intergenic |
TCAAGTGTCATCCTTTGAAG+AGG | 0.583835 | 2.1:+36154100 | None:intergenic |
ATTGTGGAAACAGCTGCCAT+CGG | 0.586223 | 2.1:-36146247 | MS.gene045801:CDS |
GTTTGATGCCCCAAGCATAA+GGG | 0.591517 | 2.1:+36147046 | None:intergenic |
GTTGGGATAACTATTGCCAT+AGG | 0.593786 | 2.1:+36149829 | None:intergenic |
GTCCTTGGAAGAGATGGCAC+TGG | 0.593944 | 2.1:+36145986 | None:intergenic |
TGCATCTTACGTGACAATCC+TGG | 0.597430 | 2.1:-36154268 | MS.gene045801:CDS |
CGTGACAATCCTGGTGAGGA+CGG | 0.597702 | 2.1:-36154259 | MS.gene045801:CDS |
GGGTCGGGTATCCAAGCGGG+CGG | 0.598636 | 2.1:+36155389 | None:intergenic |
CGCCACGTGAAATATCAACC+AGG | 0.599497 | 2.1:-36151807 | MS.gene045801:CDS |
AATGATGCATATACTAGCCA+TGG | 0.600506 | 2.1:+36149166 | None:intergenic |
GATAGCAGACCAATCATAGC+CGG | 0.600611 | 2.1:+36147773 | None:intergenic |
ACTTGAGGAATTGCGTCAAG+AGG | 0.601240 | 2.1:-36154083 | MS.gene045801:CDS |
CTAATCTTGGATGGATGATG+GGG | 0.601678 | 2.1:-36149189 | MS.gene045801:CDS |
GTATTTGAGCGTACTTCTAG+AGG | 0.601910 | 2.1:-36146868 | MS.gene045801:CDS |
TTGGTCGGTTGCTTGAGAAG+AGG | 0.603512 | 2.1:-36154526 | MS.gene045801:CDS |
TTCAGCATGCAACTGCGTAA+CGG | 0.605673 | 2.1:-36149793 | MS.gene045801:CDS |
TCCCAAATGCAGTAGAGTTG+TGG | 0.606869 | 2.1:-36149863 | MS.gene045801:intron |
TAAAAGCTGCTGCAGATGCG+TGG | 0.607205 | 2.1:-36149255 | MS.gene045801:CDS |
TACCAGTGCCATCTCTTCCA+AGG | 0.607221 | 2.1:-36145988 | MS.gene045801:CDS |
GCGTATGCTCTTGAATCACT+GGG | 0.609635 | 2.1:-36151946 | MS.gene045801:CDS |
CCTCAAACAAGGTTATGAGA+AGG | 0.610766 | 2.1:-36145961 | MS.gene045801:CDS |
TCATGTAAAATACAGAGGCA+AGG | 0.615184 | 2.1:-36149539 | MS.gene045801:intron |
CAAGTGTCATCCTTTGAAGA+GGG | 0.616887 | 2.1:+36154101 | None:intergenic |
GGCAAAGCCGGAGCCAAGTG+GGG | 0.618733 | 2.1:+36149108 | None:intergenic |
GTGGTCTCTCGCAATTCCAA+GGG | 0.619247 | 2.1:+36155574 | None:intergenic |
TCCAAGGACAGCCTCAAACA+AGG | 0.622443 | 2.1:-36145972 | MS.gene045801:CDS |
CACCTTTACGAACGTCCAAG+TGG | 0.624594 | 2.1:+36149230 | None:intergenic |
TCTTCAAAGGATGACACTTG+AGG | 0.625524 | 2.1:-36154098 | MS.gene045801:CDS |
CAGGAAGCCATTGACCACTT+GGG | 0.627950 | 2.1:+36154224 | None:intergenic |
AGCCTGGTTGATATTTCACG+TGG | 0.628870 | 2.1:+36151805 | None:intergenic |
GCAATAGTTATCCCAACTAG+AGG | 0.631298 | 2.1:-36149823 | MS.gene045801:CDS |
CAAAAGAAATTTGAATGACA+CGG | 0.631430 | 2.1:-36154158 | MS.gene045801:CDS |
GAAATTGAACGCATATGCAA+CGG | 0.631869 | 2.1:-36146283 | MS.gene045801:CDS |
AAGCTCTTCCCATCAGCCAA+AGG | 0.637210 | 2.1:+36147601 | None:intergenic |
AACCTGCAAGAACGATAGCT+AGG | 0.637454 | 2.1:+36151860 | None:intergenic |
ACCAGAAGGTGGTATCCCGA+TGG | 0.638315 | 2.1:+36146231 | None:intergenic |
CCTATCATTGAATATTGTGG+TGG | 0.640679 | 2.1:-36147570 | MS.gene045801:CDS |
TGGCGTGATGAACTACAAGA+TGG | 0.642548 | 2.1:-36154127 | MS.gene045801:CDS |
CTTGCTGATGTTGTGCCACG+TGG | 0.645928 | 2.1:+36155490 | None:intergenic |
TTGGCAAAGCCGGAGCCAAG+TGG | 0.645965 | 2.1:+36149106 | None:intergenic |
AATGCCTCTCTGGAATGGAA+AGG | 0.647832 | 2.1:-36146982 | MS.gene045801:intron |
GGTCGGTTGCTTGAGAAGAG+GGG | 0.647991 | 2.1:-36154524 | MS.gene045801:CDS |
TTACATTGACGAATGTTGGT+CGG | 0.649277 | 2.1:-36154541 | MS.gene045801:CDS |
TTAATTCCGTGAGACGCAGG+TGG | 0.656956 | 2.1:+36155540 | None:intergenic |
GCCAATGAATTGTACATCTG+TGG | 0.666720 | 2.1:-36151890 | MS.gene045801:CDS |
AGAGGATACTATCATGCACA+TGG | 0.684640 | 2.1:-36146850 | MS.gene045801:CDS |
CTTACGTGACAATCCTGGTG+AGG | 0.695639 | 2.1:-36154263 | MS.gene045801:CDS |
ATACGGGTCGGGTATCCAAG+CGG | 0.702012 | 2.1:+36155385 | None:intergenic |
TGTGGTGGTACAGAGATTGG+GGG | 0.703383 | 2.1:-36147555 | MS.gene045801:CDS |
TCTACCTTTCCATTCCAGAG+AGG | 0.716419 | 2.1:+36146978 | None:intergenic |
GCAGGTGGAGAGTTGCAGCG+TGG | 0.736414 | 2.1:+36155555 | None:intergenic |
GGTTCATCCTCATACCCAAG+TGG | 0.740054 | 2.1:-36154238 | MS.gene045801:CDS |
GAACTGATGCATCTGCCACG+TGG | 0.760171 | 2.1:-36155505 | MS.gene045801:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 36145913 | 36155642 | 36145913 | ID=MS.gene045801 |
chr2.1 | mRNA | 36145913 | 36155642 | 36145913 | ID=MS.gene045801.t1;Parent=MS.gene045801 |
chr2.1 | exon | 36155389 | 36155642 | 36155389 | ID=MS.gene045801.t1.exon1;Parent=MS.gene045801.t1 |
chr2.1 | CDS | 36155389 | 36155642 | 36155389 | ID=cds.MS.gene045801.t1;Parent=MS.gene045801.t1 |
chr2.1 | exon | 36154442 | 36154571 | 36154442 | ID=MS.gene045801.t1.exon2;Parent=MS.gene045801.t1 |
chr2.1 | CDS | 36154442 | 36154571 | 36154442 | ID=cds.MS.gene045801.t1;Parent=MS.gene045801.t1 |
chr2.1 | exon | 36154079 | 36154347 | 36154079 | ID=MS.gene045801.t1.exon3;Parent=MS.gene045801.t1 |
chr2.1 | CDS | 36154079 | 36154347 | 36154079 | ID=cds.MS.gene045801.t1;Parent=MS.gene045801.t1 |
chr2.1 | exon | 36151771 | 36151975 | 36151771 | ID=MS.gene045801.t1.exon4;Parent=MS.gene045801.t1 |
chr2.1 | CDS | 36151771 | 36151975 | 36151771 | ID=cds.MS.gene045801.t1;Parent=MS.gene045801.t1 |
chr2.1 | exon | 36149983 | 36150023 | 36149983 | ID=MS.gene045801.t1.exon5;Parent=MS.gene045801.t1 |
chr2.1 | CDS | 36149983 | 36150023 | 36149983 | ID=cds.MS.gene045801.t1;Parent=MS.gene045801.t1 |
chr2.1 | exon | 36149748 | 36149873 | 36149748 | ID=MS.gene045801.t1.exon6;Parent=MS.gene045801.t1 |
chr2.1 | CDS | 36149748 | 36149873 | 36149748 | ID=cds.MS.gene045801.t1;Parent=MS.gene045801.t1 |
chr2.1 | exon | 36149473 | 36149546 | 36149473 | ID=MS.gene045801.t1.exon7;Parent=MS.gene045801.t1 |
chr2.1 | CDS | 36149473 | 36149546 | 36149473 | ID=cds.MS.gene045801.t1;Parent=MS.gene045801.t1 |
chr2.1 | exon | 36149096 | 36149316 | 36149096 | ID=MS.gene045801.t1.exon8;Parent=MS.gene045801.t1 |
chr2.1 | CDS | 36149096 | 36149316 | 36149096 | ID=cds.MS.gene045801.t1;Parent=MS.gene045801.t1 |
chr2.1 | exon | 36147771 | 36147865 | 36147771 | ID=MS.gene045801.t1.exon9;Parent=MS.gene045801.t1 |
chr2.1 | CDS | 36147771 | 36147865 | 36147771 | ID=cds.MS.gene045801.t1;Parent=MS.gene045801.t1 |
chr2.1 | exon | 36147449 | 36147665 | 36147449 | ID=MS.gene045801.t1.exon10;Parent=MS.gene045801.t1 |
chr2.1 | CDS | 36147449 | 36147665 | 36147449 | ID=cds.MS.gene045801.t1;Parent=MS.gene045801.t1 |
chr2.1 | exon | 36146983 | 36147108 | 36146983 | ID=MS.gene045801.t1.exon11;Parent=MS.gene045801.t1 |
chr2.1 | CDS | 36146983 | 36147108 | 36146983 | ID=cds.MS.gene045801.t1;Parent=MS.gene045801.t1 |
chr2.1 | exon | 36146813 | 36146911 | 36146813 | ID=MS.gene045801.t1.exon12;Parent=MS.gene045801.t1 |
chr2.1 | CDS | 36146813 | 36146911 | 36146813 | ID=cds.MS.gene045801.t1;Parent=MS.gene045801.t1 |
chr2.1 | exon | 36146105 | 36146317 | 36146105 | ID=MS.gene045801.t1.exon13;Parent=MS.gene045801.t1 |
chr2.1 | CDS | 36146105 | 36146317 | 36146105 | ID=cds.MS.gene045801.t1;Parent=MS.gene045801.t1 |
chr2.1 | exon | 36145913 | 36146023 | 36145913 | ID=MS.gene045801.t1.exon14;Parent=MS.gene045801.t1 |
chr2.1 | CDS | 36145913 | 36146023 | 36145913 | ID=cds.MS.gene045801.t1;Parent=MS.gene045801.t1 |
Gene Sequence |
Protein sequence |