AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08723

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08723.t1 MTR_4g058970 99.054 846 8 0 1 846 1 846 0.0 1747
MS.gene08723.t1 MTR_2g094520 79.221 847 165 7 3 846 1 839 0.0 1411
MS.gene08723.t1 MTR_2g030130 69.441 841 236 8 19 846 4 836 0.0 1202
MS.gene08723.t1 MTR_2g101190 65.950 837 261 9 24 846 10 836 0.0 1130
MS.gene08723.t1 MTR_8g013980 65.279 841 262 12 21 846 7 832 0.0 1121
MS.gene08723.t1 MTR_3g109800 65.018 829 275 8 24 846 16 835 0.0 1115
MS.gene08723.t1 MTR_3g109800 65.513 780 255 7 24 797 16 787 0.0 1050
MS.gene08723.t1 MTR_3g109800 65.517 696 228 6 24 713 16 705 0.0 930
MS.gene08723.t1 MTR_3g109800 61.102 599 221 6 252 846 4 594 0.0 756
MS.gene08723.t1 MTR_2g101720 24.053 528 298 19 29 483 143 640 7.80e-23 105
MS.gene08723.t1 MTR_2g088470 21.866 686 367 24 12 595 54 672 2.40e-21 100
MS.gene08723.t1 MTR_7g427710 22.380 706 394 27 7 652 1 612 5.03e-19 92.4
MS.gene08723.t1 MTR_5g005600 21.039 751 415 29 32 685 52 721 8.52e-13 72.8
MS.gene08723.t1 MTR_4g047800 32.479 117 71 2 9 125 44 152 5.84e-12 70.1
MS.gene08723.t1 MTR_4g047800 22.244 499 287 16 212 681 304 730 6.47e-12 69.7
MS.gene08723.t1 MTR_6g477820 30.058 173 90 5 18 190 22 163 6.98e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08723.t1 AT5G60690 81.647 850 142 7 3 846 1 842 0.0 1436
MS.gene08723.t1 AT2G34710 68.794 846 237 11 19 846 16 852 0.0 1173
MS.gene08723.t1 AT1G30490 66.550 858 251 10 7 846 2 841 0.0 1159
MS.gene08723.t1 AT1G52150 67.223 839 245 10 24 846 13 837 0.0 1134
MS.gene08723.t1 AT1G52150 67.223 839 244 10 24 846 13 836 0.0 1133
MS.gene08723.t1 AT4G32880 64.852 845 268 15 17 846 3 833 0.0 1098
MS.gene08723.t1 AT1G52150 67.342 790 228 10 24 797 13 788 0.0 1063
MS.gene08723.t1 AT5G32670 67.143 70 23 0 292 361 37 106 4.19e-26 106
MS.gene08723.t1 AT1G79840 23.280 683 383 27 28 647 46 650 4.16e-25 112
MS.gene08723.t1 AT1G79840 23.280 683 383 27 28 647 46 650 4.16e-25 112
MS.gene08723.t1 AT1G79840 23.280 683 383 27 28 647 104 708 4.53e-25 112
MS.gene08723.t1 AT1G79840 23.280 683 383 27 28 647 133 737 6.14e-25 111
MS.gene08723.t1 AT1G79840 24.335 526 326 20 28 499 104 611 1.03e-23 107
MS.gene08723.t1 AT4G21750 23.664 524 298 23 195 684 306 761 1.35e-14 78.6
MS.gene08723.t1 AT4G21750 35.714 98 55 2 28 125 65 154 4.56e-12 70.5
MS.gene08723.t1 AT4G21750 23.664 524 298 23 195 684 306 761 1.35e-14 78.6
MS.gene08723.t1 AT4G21750 35.714 98 55 2 28 125 65 154 4.56e-12 70.5
MS.gene08723.t1 AT4G21750 23.664 524 298 23 195 684 306 761 1.35e-14 78.6
MS.gene08723.t1 AT4G21750 35.714 98 55 2 28 125 65 154 4.56e-12 70.5
MS.gene08723.t1 AT4G21750 23.664 524 298 23 195 684 306 761 1.35e-14 78.6
MS.gene08723.t1 AT4G21750 35.714 98 55 2 28 125 65 154 4.56e-12 70.5
MS.gene08723.t1 AT5G52170 24.737 380 230 12 29 371 61 421 3.58e-14 77.0
MS.gene08723.t1 AT5G52170 24.737 380 230 12 29 371 61 421 3.58e-14 77.0
MS.gene08723.t1 AT5G52170 24.737 380 230 12 29 371 61 421 3.89e-14 77.0
MS.gene08723.t1 AT1G05230 35.714 98 55 2 28 125 67 156 9.69e-12 69.3
MS.gene08723.t1 AT1G05230 35.714 98 55 2 28 125 67 156 9.69e-12 69.3
MS.gene08723.t1 AT1G05230 35.714 98 55 2 28 125 67 156 9.69e-12 69.3
MS.gene08723.t1 AT1G05230 35.714 98 55 2 28 125 67 156 9.69e-12 69.3
MS.gene08723.t1 AT1G05230 35.714 98 55 2 28 125 67 156 9.69e-12 69.3
MS.gene08723.t1 AT1G05230 35.714 98 55 2 28 125 67 156 9.69e-12 69.3
MS.gene08723.t1 AT1G05230 35.714 98 55 2 28 125 67 156 9.69e-12 69.3
MS.gene08723.t1 AT1G05230 35.714 98 55 2 28 125 67 156 9.69e-12 69.3
MS.gene08723.t1 AT1G05230 35.714 98 55 2 28 125 67 156 9.69e-12 69.3
MS.gene08723.t1 AT1G05230 35.714 98 55 2 28 125 67 156 9.69e-12 69.3
MS.gene08723.t1 AT1G05230 35.714 98 55 2 28 125 67 156 1.00e-11 69.3
MS.gene08723.t1 AT1G05230 35.714 98 55 2 28 125 67 156 1.76e-11 68.2
MS.gene08723.t1 AT1G73360 35.714 98 55 2 28 125 35 124 2.88e-11 67.8

Find 221 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTTAATCAGTTACTATT+TGG 0.070575 4.4:+44868487 MS.gene08723:intron
TGGCTCCGGCCCGGGATTTC+TGG 0.116971 4.4:+44866071 MS.gene08723:CDS
TAGCTTTCTCTTTCATAAAT+TGG 0.177453 4.4:+44869099 MS.gene08723:CDS
CTCAATGGTTCCTCCATTTC+CGG 0.218751 4.4:-44865939 None:intergenic
AGAAGAGCTACTTAGATTCT+TGG 0.227127 4.4:-44866951 None:intergenic
TGAGCAGCAGCAGTTGAATT+AGG 0.229833 4.4:-44866259 None:intergenic
ACCAAGATAAACGATCTTTA+AGG 0.256930 4.4:-44865874 None:intergenic
CCTTTAATCAGTTACTATTT+GGG 0.264850 4.4:+44868488 MS.gene08723:intron
GAACGTTCCTCCAGCGGTTT+TGG 0.267801 4.4:+44867121 MS.gene08723:intron
TAGGGATATTCACCTGTTAC+AGG 0.269982 4.4:+44867536 MS.gene08723:CDS
AATGGATCTGCCAGAGTTAT+AGG 0.277310 4.4:+44868382 MS.gene08723:CDS
GAAACATTGTGAAAACTTCT+AGG 0.277838 4.4:-44865913 None:intergenic
GATGCTCCATTGGTGCCTTC+TGG 0.293806 4.4:+44867857 MS.gene08723:CDS
TGAGCTAGTGTAACTGCTTC+TGG 0.294323 4.4:-44868360 None:intergenic
GGCTTCAATGACGCTGTAAA+TGG 0.300316 4.4:+44866857 MS.gene08723:CDS
CTGAGATCAGATTCTCTTGT+TGG 0.314455 4.4:+44868521 MS.gene08723:CDS
GTGGCTACCTGCTCAATCTT+TGG 0.322456 4.4:-44866710 None:intergenic
GAAAGGTCCCTGTCTGGTTC+TGG 0.324143 4.4:+44866229 MS.gene08723:CDS
TGATTGCCAGTGAATCTTGT+AGG 0.327004 4.4:-44867248 None:intergenic
TGCAGATGCTTGAAGTTATT+AGG 0.332303 4.4:+44867472 MS.gene08723:intron
TGGCCAGCCTGGTCCGGATT+CGG 0.332357 4.4:+44865640 MS.gene08723:intron
GATAGGCACTTCGATATATT+AGG 0.337752 4.4:+44866613 MS.gene08723:intron
TAAAGTGGTCGTAGTACTTC+TGG 0.341715 4.4:-44866471 None:intergenic
TCCCTGTCTGGTTCTGGCAC+TGG 0.345502 4.4:+44866235 MS.gene08723:CDS
GTTGATTGGGTCCAGATGCC+TGG 0.352645 4.4:+44865219 MS.gene08723:CDS
TCTGGGAACATTTCATCAAT+TGG 0.355893 4.4:-44867833 None:intergenic
CTTGAAGTTATTAGGCTTGA+AGG 0.356810 4.4:+44867480 MS.gene08723:CDS
GGGTTTGCTTATCTGCCAGC+TGG 0.357471 4.4:+44868984 MS.gene08723:CDS
GGCACCAATGGAGCATCATC+TGG 0.365656 4.4:-44867851 None:intergenic
TCTTAGATACACTACAACTT+TGG 0.376901 4.4:+44866096 MS.gene08723:CDS
TGGAGAACCAGGAGAAAGTT+TGG 0.380345 4.4:-44868340 None:intergenic
ATTGATAAGCATCTAGATTC+AGG 0.380570 4.4:+44864148 MS.gene08723:CDS
ACAATGTTTCCTGCCGGAAA+TGG 0.381342 4.4:+44865926 MS.gene08723:CDS
AGTATGGAATTTACCTTTGT+AGG 0.381444 4.4:-44865734 None:intergenic
CGGGCCGGAGCCAGCGTTGT+TGG 0.382892 4.4:-44866061 None:intergenic
TTCTCTTGGCCAGCCTGGTC+CGG 0.383123 4.4:+44865634 MS.gene08723:intron
GGTGAAGTGGTATACGGATT+AGG 0.388453 4.4:+44866657 MS.gene08723:CDS
AGTAAGGCATTACCTGTAAC+AGG 0.394026 4.4:-44867548 None:intergenic
ATCAAATAATCATGCCTCTT+GGG 0.394989 4.4:+44867267 MS.gene08723:CDS
AACCAAACCTTGATCTGTTT+AGG 0.396617 4.4:-44864298 None:intergenic
TCCTTAAAGATCGTTTATCT+TGG 0.397827 4.4:+44865873 MS.gene08723:CDS
CAAGGCTTCAAACTGTGAAT+AGG 0.399527 4.4:+44864461 MS.gene08723:CDS
GAAAGTTTGGCACCAACAGC+TGG 0.405904 4.4:-44868327 None:intergenic
AGACCTTCATCCCAGGCATC+TGG 0.407117 4.4:-44865230 None:intergenic
CAACAACGCTGGCTCCGGCC+CGG 0.411682 4.4:+44866062 MS.gene08723:CDS
AACAACGCTGGCTCCGGCCC+GGG 0.413344 4.4:+44866063 MS.gene08723:CDS
TCGAGTGGTGAAGTGGTATA+CGG 0.413960 4.4:+44866651 MS.gene08723:CDS
TAGATTCAGGGAAATATGTT+AGG 0.416438 4.4:+44864161 MS.gene08723:CDS
CTACAGGAACTGCTGTTGAT+TGG 0.418349 4.4:+44865205 MS.gene08723:CDS
TACAGGAACTGCTGTTGATT+GGG 0.419994 4.4:+44865206 MS.gene08723:CDS
GCAAAGATCCCAACCGAATC+CGG 0.421507 4.4:-44865653 None:intergenic
GAGCAGCAGCAGTTGAATTA+GGG 0.422108 4.4:-44866258 None:intergenic
GTTGGTGCCAAACTTTCTCC+TGG 0.425700 4.4:+44868333 MS.gene08723:CDS
TGTTGTCTTCTCATGGAACT+AGG 0.427476 4.4:-44864238 None:intergenic
GGGATCTGCATGTCGACAAT+GGG 0.430271 4.4:+44869005 MS.gene08723:CDS
CAGTGTCCGGTTTGTATTCA+CGG 0.430832 4.4:-44868085 None:intergenic
AACCTAAACAGATCAAGGTT+TGG 0.433904 4.4:+44864296 MS.gene08723:CDS
AATCAAATAATCATGCCTCT+TGG 0.435473 4.4:+44867266 MS.gene08723:CDS
AACCACCTGTTGCATTAACT+TGG 0.435864 4.4:-44868871 None:intergenic
CAATGAACAGTGTTATCTTC+TGG 0.436228 4.4:-44869074 None:intergenic
CACTGCCGTGAGTTGTCGTT+GGG 0.437038 4.4:-44868134 None:intergenic
GCAAGAAAATGTTGTAATCA+TGG 0.437795 4.4:+44868230 MS.gene08723:CDS
GTTTATACCGGACGGTGAAA+TGG 0.443330 4.4:-44868304 None:intergenic
GCAGGAACCTATGCCTATCC+AGG 0.445397 4.4:+44867218 MS.gene08723:CDS
GCAAGTTCCCTCACATTGCT+TGG 0.446182 4.4:+44866980 MS.gene08723:CDS
GATAAAATATTTGACGAGTC+TGG 0.446806 4.4:+44868822 MS.gene08723:CDS
AGCAAAGAAAAGAGGCTTCA+AGG 0.453264 4.4:+44864443 MS.gene08723:CDS
AATCAATTGTTGTCTTCTCA+TGG 0.455291 4.4:-44864245 None:intergenic
CTCTGTGCAGAGGGTTGCCA+TGG 0.455799 4.4:+44868281 MS.gene08723:CDS
AGCAATGTGAGGGAACTTGC+TGG 0.458432 4.4:-44866977 None:intergenic
GGTTCAATGTTGGAAAGAAT+AGG 0.460052 4.4:-44864277 None:intergenic
TGCTCCAACAACGCTGGCTC+CGG 0.460616 4.4:+44866057 MS.gene08723:CDS
CAGCCTGGTCCGGATTCGGT+TGG 0.460852 4.4:+44865644 MS.gene08723:intron
GTTTGTGAAAGGTCCCTGTC+TGG 0.462237 4.4:+44866223 MS.gene08723:CDS
TCTTGCATAGTGCTGTCAAA+AGG 0.463354 4.4:-44868213 None:intergenic
AAGTCTCCTCCGCAATTGAT+AGG 0.463644 4.4:-44865161 None:intergenic
GGTCCAGATGCCTGGGATGA+AGG 0.464996 4.4:+44865227 MS.gene08723:CDS
AGCCTGGTCCGGATTCGGTT+GGG 0.465213 4.4:+44865645 MS.gene08723:intron
CATTGAACCTAAACAGATCA+AGG 0.465302 4.4:+44864291 MS.gene08723:CDS
GCCATGGCCATTTCACCGTC+CGG 0.467770 4.4:+44868297 MS.gene08723:CDS
TTTGGTATTGCAGTCGCAGC+CGG 0.467861 4.4:+44868725 MS.gene08723:intron
TGTTAGCACTTTCCATGCAA+TGG 0.472949 4.4:-44869051 None:intergenic
TACTGATGCAAGTTGTGATT+CGG 0.473449 4.4:+44864993 MS.gene08723:CDS
CTTCTCATGGAACTAGGCTT+AGG 0.473637 4.4:-44864232 None:intergenic
TATCTTGGTTTCGCGAGTGT+CGG 0.476648 4.4:+44865888 MS.gene08723:CDS
TGTAGACTTGCCTATAACTC+TGG 0.480673 4.4:-44868392 None:intergenic
TGTTGATGGAGGAAAATGAT+AGG 0.483631 4.4:+44864506 MS.gene08723:CDS
TACTGAACAAGTTGAAGCAT+TGG 0.483862 4.4:+44864189 MS.gene08723:CDS
ATCTAAGAGTCCAGAAATCC+CGG 0.484814 4.4:-44866081 None:intergenic
AAGGGAACACCGCTCAGAAT+GGG 0.485855 4.4:+44867154 MS.gene08723:CDS
CTTGCATAGTGCTGTCAAAA+GGG 0.487844 4.4:-44868212 None:intergenic
GCATCAGTATTTGCTGCTGA+TGG 0.488575 4.4:-44864979 None:intergenic
GTATTACTTCAAGATTTAAG+TGG 0.492819 4.4:-44866363 None:intergenic
AGAGATGCTACTAACCCTGC+TGG 0.494241 4.4:+44865042 MS.gene08723:CDS
ACCTTTGGTGATTCATAAAG+TGG 0.494265 4.4:-44866486 None:intergenic
GCACTGCCGTGAGTTGTCGT+TGG 0.495965 4.4:-44868135 None:intergenic
TCACAGCTTGTGTGTGAGAA+TGG 0.498450 4.4:+44864544 MS.gene08723:CDS
TGCAATGAACAAGTTGTTGA+TGG 0.500516 4.4:+44864492 MS.gene08723:CDS
CTGAATGTTCGCAAAACAGC+AGG 0.501563 4.4:-44866687 None:intergenic
TTTGTATTTGCAAATCAAGC+TGG 0.503494 4.4:+44868750 MS.gene08723:CDS
ATCCCAACCGAATCCGGACC+AGG 0.503586 4.4:-44865647 None:intergenic
TCAAGCTGGCCTTGACATGT+TGG 0.506180 4.4:+44868764 MS.gene08723:CDS
GGCCAGTGCCAGAACCAGAC+AGG 0.510237 4.4:-44866237 None:intergenic
TAAGGGAACACCGCTCAGAA+TGG 0.510249 4.4:+44867153 MS.gene08723:CDS
GGTTTGCTTATCTGCCAGCT+GGG 0.514174 4.4:+44868985 MS.gene08723:CDS
ATATATTAGGCAAATAGCTC+AGG 0.515140 4.4:+44866626 MS.gene08723:CDS
ACAAGTTGAAGCATTGGAAA+GGG 0.515957 4.4:+44864195 MS.gene08723:CDS
AGGCAATAGTCAACACTGAT+CGG 0.516074 4.4:-44868182 None:intergenic
GAGTTCCTTTCAAAGGCTAC+AGG 0.517677 4.4:+44865189 MS.gene08723:CDS
GGCAATAGTCAACACTGATC+GGG 0.517701 4.4:-44868181 None:intergenic
TTGATTGGGTCCAGATGCCT+GGG 0.519139 4.4:+44865220 MS.gene08723:CDS
AAGCAGTTACACTAGCTCAA+TGG 0.520279 4.4:+44868364 MS.gene08723:CDS
TTCTTCTTGCAGATATGTAG+TGG 0.520407 4.4:+44867764 MS.gene08723:intron
ACCAACAGCTGGGTTTATAC+CGG 0.520732 4.4:-44868316 None:intergenic
GTCGACATGCAGATCCCAGC+TGG 0.520952 4.4:-44868999 None:intergenic
CGGACACTGGATTTGACGTC+AGG 0.521504 4.4:+44868099 MS.gene08723:CDS
CTTGCAGAACGTTCCTCCAG+CGG 0.526281 4.4:+44867115 MS.gene08723:intron
GATCTGTTTAGGTTCAATGT+TGG 0.526382 4.4:-44864287 None:intergenic
ATAGAAAGTAGTAGTAGTGG+TGG 0.530086 4.4:+44864121 MS.gene08723:CDS
TGGGATCTGCATGTCGACAA+TGG 0.533448 4.4:+44869004 MS.gene08723:CDS
CATGGCTATGGCTATGGCTG+TGG 0.534941 4.4:+44864090 None:intergenic
CTGTGTGTAAATAAGCTCAA+TGG 0.538636 4.4:-44865954 None:intergenic
AAGAAACATGGCTATGGCTA+TGG 0.538767 4.4:+44864084 None:intergenic
ATGAGGCCTACAAGATTCAC+TGG 0.543583 4.4:+44867242 MS.gene08723:CDS
TTTGACAGAGTTCCTTTCAA+AGG 0.544138 4.4:+44865182 MS.gene08723:CDS
TTGATAAGCATCTAGATTCA+GGG 0.546019 4.4:+44864149 MS.gene08723:CDS
CGGAAACCAGAAGGCACCAA+TGG 0.546575 4.4:-44867863 None:intergenic
TGTGATTTCCTCTGTGCAGA+GGG 0.547032 4.4:+44868272 MS.gene08723:CDS
GTAACTGCTTCTGGAGAACC+AGG 0.547189 4.4:-44868351 None:intergenic
AATCTTGTAGGCCTCATCCC+TGG 0.549464 4.4:-44867236 None:intergenic
CAGTTCCTGTAGCCTTTGAA+AGG 0.551448 4.4:-44865194 None:intergenic
AACAAGTTGAAGCATTGGAA+AGG 0.552407 4.4:+44864194 MS.gene08723:CDS
AGGATGCCGTGAATACAAAC+CGG 0.553865 4.4:+44868079 MS.gene08723:CDS
ATGGTTCCTCCATTTCCGGC+AGG 0.554780 4.4:-44865935 None:intergenic
CTTTAATCAGTTACTATTTG+GGG 0.555387 4.4:+44868489 MS.gene08723:intron
CTGACGTCAAATCCAGTGTC+CGG 0.556266 4.4:-44868098 None:intergenic
AACAGCATAAAATCGCGTCC+TGG 0.557589 4.4:-44868574 None:intergenic
TTATGAATCACCAAAGGTGG+TGG 0.558033 4.4:+44866491 MS.gene08723:CDS
GAAACAACTGTGGCATCACC+AGG 0.558649 4.4:+44868556 MS.gene08723:CDS
GGACTGATGAGAACGCTGTT+GGG 0.559056 4.4:+44867786 MS.gene08723:CDS
TCTTCTTGCAGATATGTAGT+GGG 0.559916 4.4:+44867765 MS.gene08723:intron
CGTACGAGCAAGCCATTGCA+TGG 0.562208 4.4:+44869039 MS.gene08723:CDS
GCGATTTCACAAAGTTGTAG+TGG 0.563887 4.4:+44865674 MS.gene08723:CDS
TGTAGGCCTCATCCCTGGAT+AGG 0.565752 4.4:-44867231 None:intergenic
GTTCCCAGATGATGCTCCAT+TGG 0.566789 4.4:+44867847 MS.gene08723:CDS
TCCTGCTTTCAGTGATGCAG+CGG 0.568391 4.4:-44867201 None:intergenic
GGTCGAATCAAGTAGCCACT+CGG 0.568475 4.4:-44866304 None:intergenic
GTGTGATTTCCTCTGTGCAG+AGG 0.569536 4.4:+44868271 MS.gene08723:CDS
TAATAGTGAACTTACTGCAA+TGG 0.570234 4.4:-44866526 None:intergenic
ATTTGACGAGTCTGGTCGCA+AGG 0.571396 4.4:+44868830 MS.gene08723:CDS
TCCGCTGCATCACTGAAAGC+AGG 0.573762 4.4:+44867200 MS.gene08723:CDS
AAAGTTTGGCACCAACAGCT+GGG 0.574992 4.4:-44868326 None:intergenic
TTCACAAAGTTGTAGTGGAG+TGG 0.575629 4.4:+44865679 MS.gene08723:CDS
AGAAAGCGAACCAAAACCGC+TGG 0.578885 4.4:-44867131 None:intergenic
CCTCATCCCTGGATAGGCAT+AGG 0.580110 4.4:-44867225 None:intergenic
CATTCAGCCAAAGATTGAGC+AGG 0.580203 4.4:+44866703 MS.gene08723:CDS
ATGTTTCCTGCCGGAAATGG+AGG 0.580359 4.4:+44865929 MS.gene08723:CDS
GCACCAATGGAGCATCATCT+GGG 0.585521 4.4:-44867850 None:intergenic
TAGAGAGAAGCAAAGAAAAG+AGG 0.587959 4.4:+44864435 MS.gene08723:CDS
AGTTCCCTCACATTGCTTGG+AGG 0.589621 4.4:+44866983 MS.gene08723:CDS
GTAAATGGATTCAGTGATGA+TGG 0.590567 4.4:+44866872 MS.gene08723:CDS
GTGAACCCAACGACAACTCA+CGG 0.590708 4.4:+44868129 MS.gene08723:CDS
CGTGAATACAAACCGGACAC+TGG 0.591523 4.4:+44868086 MS.gene08723:CDS
GAGTTGTTTCCAACATGTCA+AGG 0.591719 4.4:-44868773 None:intergenic
ACCGGACGGTGAAATGGCCA+TGG 0.592058 4.4:-44868298 None:intergenic
GGGACTGATGAGAACGCTGT+TGG 0.594775 4.4:+44867785 MS.gene08723:CDS
GAACACAATTGAACATGAAG+AGG 0.595332 4.4:+44867289 MS.gene08723:CDS
AATCAGTTACTATTTGGGGA+CGG 0.595776 4.4:+44868493 MS.gene08723:intron
TGTTAGTTTAGAACCTACAA+AGG 0.596128 4.4:+44865721 MS.gene08723:CDS
AGGTTTGGTTCCAAAATCGA+AGG 0.597184 4.4:+44864311 MS.gene08723:CDS
ATTCGACCATGTGATGGTGG+CGG 0.598224 4.4:+44866319 MS.gene08723:CDS
TGTTCAATTGTGTTCCCAAG+AGG 0.599573 4.4:-44867281 None:intergenic
AAATAAGAGACCTTCATCCC+AGG 0.600192 4.4:-44865237 None:intergenic
TTGCAGACTCCTATCAATTG+CGG 0.602778 4.4:+44865152 MS.gene08723:intron
CATCTTCTTGAGCAAGAGAG+TGG 0.603372 4.4:-44867503 None:intergenic
CATATAGAAAGTAGTAGTAG+TGG 0.603914 4.4:+44864118 MS.gene08723:CDS
GAGATGCTACTAACCCTGCT+GGG 0.605907 4.4:+44865043 MS.gene08723:CDS
GACATATGCTCCAACAACGC+TGG 0.606931 4.4:+44866051 MS.gene08723:intron
GTCGAATCAAGTAGCCACTC+GGG 0.608954 4.4:-44866303 None:intergenic
TGATTTGCAAATACAAACAC+CGG 0.610151 4.4:-44868744 None:intergenic
AGTACTTCTGGCACACTCCA+CGG 0.612200 4.4:-44866459 None:intergenic
TCCGGTATAAACCCAGCTGT+TGG 0.614253 4.4:+44868315 MS.gene08723:CDS
GGGATGATGCGGAAACCAGA+AGG 0.615520 4.4:-44867872 None:intergenic
TCAGGAATCGAGTGGTGAAG+TGG 0.617819 4.4:+44866644 MS.gene08723:CDS
GCCAGTGCCAGAACCAGACA+GGG 0.617845 4.4:-44866236 None:intergenic
TTGAATCTAATGGGATGATG+CGG 0.619863 4.4:-44867883 None:intergenic
GCATCTCTCTTAGAATTCTG+AGG 0.619916 4.4:-44865027 None:intergenic
CATTGAGCTTATTTACACAC+AGG 0.620551 4.4:+44865955 MS.gene08723:CDS
GAATTCCTCCAAGCAATGTG+AGG 0.621910 4.4:-44866988 None:intergenic
AGAGTCCAGAAATCCCGGGC+CGG 0.624215 4.4:-44866076 None:intergenic
CAGGAACCTATGCCTATCCA+GGG 0.626828 4.4:+44867219 MS.gene08723:CDS
CCTATGCCTATCCAGGGATG+AGG 0.627418 4.4:+44867225 MS.gene08723:CDS
ATGGATTCAGTGATGATGGT+TGG 0.628950 4.4:+44866876 MS.gene08723:CDS
TACACTACAACTTTGGACAA+TGG 0.630488 4.4:+44866103 MS.gene08723:CDS
CAGACTCCTATCAATTGCGG+AGG 0.631681 4.4:+44865155 MS.gene08723:intron
TACTTGATTCGACCATGTGA+TGG 0.633229 4.4:+44866313 MS.gene08723:CDS
TGTGGGAAGAAACATGGCTA+TGG 0.633966 4.4:+44864078 None:intergenic
AATTCCTCCAAGCAATGTGA+GGG 0.636010 4.4:-44866987 None:intergenic
GGAGTGGCAGCTCGAGCTTG+CGG 0.638597 4.4:+44865695 MS.gene08723:CDS
TTTGGACAATGGCAGTCTTG+TGG 0.639500 4.4:+44866114 MS.gene08723:CDS
ATTGAACCGCCACCATCACA+TGG 0.640356 4.4:-44866325 None:intergenic
TCTAAGAGTCCAGAAATCCC+GGG 0.642124 4.4:-44866080 None:intergenic
GATTTAAGTGGTCTACAATG+TGG 0.642422 4.4:-44866351 None:intergenic
AAGCGAACCAAAACCGCTGG+AGG 0.647188 4.4:-44867128 None:intergenic
TTGATTCGACCATGTGATGG+TGG 0.651436 4.4:+44866316 MS.gene08723:CDS
TGGTCTATACTGAACTGTGA+CGG 0.652371 4.4:+44866896 MS.gene08723:CDS
ACTTTATGAATCACCAAAGG+TGG 0.655976 4.4:+44866488 MS.gene08723:CDS
AGCTTTACAAGACATCACAT+TGG 0.658238 4.4:+44868800 MS.gene08723:CDS
TCTGCATGTCGACAATGGGG+CGG 0.660182 4.4:+44869009 MS.gene08723:CDS
GCTGTCAAAAGGGAACTGAA+AGG 0.661239 4.4:-44868202 None:intergenic
GGATCTGCATGTCGACAATG+GGG 0.672158 4.4:+44869006 MS.gene08723:CDS
ACTGAACTGTGACGGCGCTG+AGG 0.673744 4.4:+44866904 MS.gene08723:CDS
ACAGCTGGGTTTATACCGGA+CGG 0.677597 4.4:-44868312 None:intergenic
ACCACTTTATGAATCACCAA+AGG 0.678609 4.4:+44866485 MS.gene08723:CDS
CAAATAGCTCAGGAATCGAG+TGG 0.680372 4.4:+44866636 MS.gene08723:CDS
TGTGTGAGAATGGATTTATG+AGG 0.695971 4.4:+44864554 MS.gene08723:CDS
AGAGCTGAAATGCTCCCGAG+TGG 0.713532 4.4:+44866289 MS.gene08723:CDS
AATGAACAAGTTGTTGATGG+AGG 0.713928 4.4:+44864495 MS.gene08723:CDS
CATGGCAACCCTCTGCACAG+AGG 0.723163 4.4:-44868280 None:intergenic
TGAAATCAGCCCATTCTGAG+CGG 0.726689 4.4:-44867163 None:intergenic
ACTTGATGCTGAAACAACTG+TGG 0.757022 4.4:+44868546 MS.gene08723:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTTAGTAGAAAAAACT+TGG - chr4.4:44865596-44865615 None:intergenic 15.0%
!! TAAACAAATATGATCAATAT+AGG + chr4.4:44867716-44867735 MS.gene08723:intron 15.0%
!! TCAATAATTTATCAATAGTA+AGG - chr4.4:44867567-44867586 None:intergenic 15.0%
!!! ATATTAATGGATATTGTATT+TGG + chr4.4:44864937-44864956 MS.gene08723:intron 15.0%
!!! TTAGTTTTGTTTTGTTTTTT+TGG + chr4.4:44864392-44864411 MS.gene08723:intron 15.0%
!! AATATAGTAATCAATTGTAG+AGG - chr4.4:44864742-44864761 None:intergenic 20.0%
!! ATTGAATTCTAGCATTAAAT+TGG - chr4.4:44864712-44864731 None:intergenic 20.0%
!! TACACAATAGAAAAAGAATT+AGG - chr4.4:44865127-44865146 None:intergenic 20.0%
!! TACTTAAAGAACTAAAATGA+AGG + chr4.4:44865409-44865428 MS.gene08723:intron 20.0%
!! TATATTATCTTCGGTAAAAA+TGG + chr4.4:44867640-44867659 MS.gene08723:intron 20.0%
!! TATCGGTAATATATTATCTT+CGG + chr4.4:44867631-44867650 MS.gene08723:intron 20.0%
!! TGTAATTCTATTTCATTGTA+TGG + chr4.4:44868612-44868631 MS.gene08723:intron 20.0%
!! TTAAAGACAATTGAAATTAG+TGG + chr4.4:44865504-44865523 MS.gene08723:intron 20.0%
!!! ATATACTTTAGAGACTTTAT+TGG - chr4.4:44865327-44865346 None:intergenic 20.0%
!!! ATGTTACTATTTTCTGTTTT+AGG + chr4.4:44868047-44868066 MS.gene08723:intron 20.0%
!!! TGATTTGTATATCAGTTTTT+TGG + chr4.4:44866806-44866825 MS.gene08723:intron 20.0%
!!! TGTTACTATTTTCTGTTTTA+GGG + chr4.4:44868048-44868067 MS.gene08723:intron 20.0%
! AAGTTGTGTATACTTTGATT+AGG + chr4.4:44868962-44868981 MS.gene08723:intron 25.0%
! AATGTGTGTAATGAATGAAA+AGG - chr4.4:44866415-44866434 None:intergenic 25.0%
! AATTCTATTTCATTGTATGG+TGG + chr4.4:44868615-44868634 MS.gene08723:intron 25.0%
! AGTTGTGTATACTTTGATTA+GGG + chr4.4:44868963-44868982 MS.gene08723:intron 25.0%
! CATACAAGAAATCATTTCAT+CGG - chr4.4:44867679-44867698 None:intergenic 25.0%
! CCAAATAGTAACTGATTAAA+GGG - chr4.4:44868490-44868509 None:intergenic 25.0%
! CCTTTAATCAGTTACTATTT+GGG + chr4.4:44868488-44868507 MS.gene08723:intron 25.0%
! CTTTAATCAGTTACTATTTG+GGG + chr4.4:44868489-44868508 MS.gene08723:intron 25.0%
! GAAGGATTTGATATTCTTTA+AGG + chr4.4:44865427-44865446 MS.gene08723:intron 25.0%
! GTATTACTTCAAGATTTAAG+TGG - chr4.4:44866366-44866385 None:intergenic 25.0%
! TAAAAACTAACATCCCAAAA+CGG - chr4.4:44867085-44867104 None:intergenic 25.0%
! TAATATATTACCGATAGATC+TGG - chr4.4:44867627-44867646 None:intergenic 25.0%
! TAGCTTTCTCTTTCATAAAT+TGG + chr4.4:44869099-44869118 MS.gene08723:CDS 25.0%
! TCTGCAATCTGTTAAAAAAT+CGG - chr4.4:44865851-44865870 None:intergenic 25.0%
! TTTATAAGTTTGAGCTTCAT+TGG + chr4.4:44864351-44864370 MS.gene08723:intron 25.0%
!! ACACTTAATTTGAGTAAATC+AGG - chr4.4:44867970-44867989 None:intergenic 25.0%
!! GATTAATGTGATTTTCTGTT+TGG + chr4.4:44868707-44868726 MS.gene08723:intron 25.0%
!!! AGAATTGATTTTGACATGTT+TGG + chr4.4:44864664-44864683 MS.gene08723:intron 25.0%
!!! AGTTTGTTGACTAATGTTAT+TGG + chr4.4:44866580-44866599 MS.gene08723:intron 25.0%
!!! CTTTTCTGAAAAAAGTCTAA+TGG + chr4.4:44868454-44868473 MS.gene08723:intron 25.0%
!!! GATTTTTTTTTCTGTCTTGA+AGG + chr4.4:44865098-44865117 MS.gene08723:intron 25.0%
!!! GTATACATTTGTTATTCTCT+TGG + chr4.4:44865620-44865639 MS.gene08723:intron 25.0%
!!! TAACTGGTTTTGAATCTAAT+GGG - chr4.4:44867895-44867914 None:intergenic 25.0%
!!! TATTTTGATTCCACTTTTGA+AGG + chr4.4:44866201-44866220 MS.gene08723:intron 25.0%
!!! TTAACTGGTTTTGAATCTAA+TGG - chr4.4:44867896-44867915 None:intergenic 25.0%
!!! TTGGTTTGTTAAATTGATTC+AGG - chr4.4:44864853-44864872 None:intergenic 25.0%
!!! TTTTAGTCTTTGCCATTAAA+AGG + chr4.4:44865358-44865377 MS.gene08723:intron 25.0%
AACAAACATGCACTAAGTTA+AGG + chr4.4:44864903-44864922 MS.gene08723:intron 30.0%
AAGGTATACATGATCTCATA+TGG - chr4.4:44866396-44866415 None:intergenic 30.0%
AATCAAATAATCATGCCTCT+TGG + chr4.4:44867266-44867285 MS.gene08723:CDS 30.0%
AATCAATTGTTGTCTTCTCA+TGG - chr4.4:44864248-44864267 None:intergenic 30.0%
ACAATTGAAATTAGTGGTCA+TGG + chr4.4:44865510-44865529 MS.gene08723:intron 30.0%
ACATTAATCTCGCGTTATAA+AGG - chr4.4:44868696-44868715 None:intergenic 30.0%
ACCAAGATAAACGATCTTTA+AGG - chr4.4:44865877-44865896 None:intergenic 30.0%
AGGAAACAAATCATTTCATG+TGG - chr4.4:44866732-44866751 None:intergenic 30.0%
AGTATGGAATTTACCTTTGT+AGG - chr4.4:44865737-44865756 None:intergenic 30.0%
ATATATTAGGCAAATAGCTC+AGG + chr4.4:44866626-44866645 MS.gene08723:CDS 30.0%
ATCAAATAATCATGCCTCTT+GGG + chr4.4:44867267-44867286 MS.gene08723:CDS 30.0%
ATCAATATAGGTATGTACTG+AGG + chr4.4:44867728-44867747 MS.gene08723:intron 30.0%
ATCCATTAATATCAACTCCA+AGG - chr4.4:44864929-44864948 None:intergenic 30.0%
ATCTGGTGCATAGTAATAAA+AGG + chr4.4:44866152-44866171 MS.gene08723:intron 30.0%
ATTGATAAGCATCTAGATTC+AGG + chr4.4:44864148-44864167 MS.gene08723:CDS 30.0%
CAATAGAGAGGAAAAAAGAA+GGG - chr4.4:44867927-44867946 None:intergenic 30.0%
CATATAGAAAGTAGTAGTAG+TGG + chr4.4:44864118-44864137 MS.gene08723:CDS 30.0%
CCCAAATAGTAACTGATTAA+AGG - chr4.4:44868491-44868510 None:intergenic 30.0%
CCCTTTAATCAGTTACTATT+TGG + chr4.4:44868487-44868506 MS.gene08723:intron 30.0%
CTGCAATCTGTTAAAAAATC+GGG - chr4.4:44865850-44865869 None:intergenic 30.0%
CTTATGTTTAGAAAGGAAGT+TGG + chr4.4:44868649-44868668 MS.gene08723:intron 30.0%
GAAAAATTAGCTCAATAGAG+AGG - chr4.4:44867939-44867958 None:intergenic 30.0%
GAAACATTGTGAAAACTTCT+AGG - chr4.4:44865916-44865935 None:intergenic 30.0%
GATAAAATATTTGACGAGTC+TGG + chr4.4:44868822-44868841 MS.gene08723:CDS 30.0%
GCAAGAAAATGTTGTAATCA+TGG + chr4.4:44868230-44868249 MS.gene08723:CDS 30.0%
GTAATCAATTGTAGAGGAAA+AGG - chr4.4:44864736-44864755 None:intergenic 30.0%
GTTGTGTATACTTTGATTAG+GGG + chr4.4:44868964-44868983 MS.gene08723:intron 30.0%
TAATAGTGAACTTACTGCAA+TGG - chr4.4:44866529-44866548 None:intergenic 30.0%
TAGATTCAGGGAAATATGTT+AGG + chr4.4:44864161-44864180 MS.gene08723:CDS 30.0%
TCAAATTAAGTGTCTTCCTA+TGG + chr4.4:44867977-44867996 MS.gene08723:intron 30.0%
TCAATAGAGAGGAAAAAAGA+AGG - chr4.4:44867928-44867947 None:intergenic 30.0%
TCAATTCACTTTGACATGAA+CGG + chr4.4:44864779-44864798 MS.gene08723:intron 30.0%
TCCTTAAAGATCGTTTATCT+TGG + chr4.4:44865873-44865892 MS.gene08723:CDS 30.0%
TCTTAGATACACTACAACTT+TGG + chr4.4:44866096-44866115 MS.gene08723:CDS 30.0%
TCTTTGCCATTAAAAGGTTA+GGG + chr4.4:44865364-44865383 MS.gene08723:intron 30.0%
TGATTTCTTGTATGTAGTTG+TGG + chr4.4:44867685-44867704 MS.gene08723:intron 30.0%
TTACATCTTATTCGGAAGTA+TGG - chr4.4:44865753-44865772 None:intergenic 30.0%
TTCGTACTAAATTTACAGCA+AGG - chr4.4:44865268-44865287 None:intergenic 30.0%
TTGATAAGCATCTAGATTCA+GGG + chr4.4:44864149-44864168 MS.gene08723:CDS 30.0%
TTTGTATTTGCAAATCAAGC+TGG + chr4.4:44868750-44868769 MS.gene08723:CDS 30.0%
! AGTGAAGATTTAACTTCATC+AGG - chr4.4:44867453-44867472 None:intergenic 30.0%
! AGTTGGAAGGTTTGTAATTT+TGG + chr4.4:44868666-44868685 MS.gene08723:intron 30.0%
! ATTGGAGAGAGTCATATTTT+AGG - chr4.4:44865309-44865328 None:intergenic 30.0%
! CCACACTTTTACATCTTATT+CGG - chr4.4:44865761-44865780 None:intergenic 30.0%
! GATTTTATGCTGTTCATTGA+AGG + chr4.4:44868583-44868602 MS.gene08723:CDS 30.0%
! GCATTATTCATGTTAAGTTG+AGG - chr4.4:44868898-44868917 None:intergenic 30.0%
! GTTTTCAATACCTTCGATTT+TGG - chr4.4:44864324-44864343 None:intergenic 30.0%
! TGATTTGCAAATACAAACAC+CGG - chr4.4:44868747-44868766 None:intergenic 30.0%
! TGTTAGTTTAGAACCTACAA+AGG + chr4.4:44865721-44865740 MS.gene08723:CDS 30.0%
! TTATGTAAGAAGAGGTTGAT+AGG - chr4.4:44867598-44867617 None:intergenic 30.0%
! TTGGAGAGAGTCATATTTTA+GGG - chr4.4:44865308-44865327 None:intergenic 30.0%
!! AAGAAGATGCTTTTGTTTCT+AGG + chr4.4:44867517-44867536 MS.gene08723:CDS 30.0%
!! ATCGAAGGTATTGAAAACTT+TGG + chr4.4:44864326-44864345 MS.gene08723:intron 30.0%
!! GAAATGATTTGTTTCCTTGA+AGG + chr4.4:44866735-44866754 MS.gene08723:intron 30.0%
!! TATGTAAGAAGAGGTTGATA+GGG - chr4.4:44867597-44867616 None:intergenic 30.0%
!! TGTCATAATTCTACTTTTCG+TGG + chr4.4:44864617-44864636 MS.gene08723:intron 30.0%
!!! AGAAGATGCTTTTGTTTCTA+GGG + chr4.4:44867518-44867537 MS.gene08723:CDS 30.0%
!!! CTTAGTGCATGTTTGTTTTT+TGG - chr4.4:44864900-44864919 None:intergenic 30.0%
!!! TTTGGTGTTTAATGTTTTGC+AGG + chr4.4:44864410-44864429 MS.gene08723:intron 30.0%
AACCAAACCTTGATCTGTTT+AGG - chr4.4:44864301-44864320 None:intergenic 35.0%
AACCTAAACAGATCAAGGTT+TGG + chr4.4:44864296-44864315 MS.gene08723:CDS 35.0%
AATCAGTTACTATTTGGGGA+CGG + chr4.4:44868493-44868512 MS.gene08723:intron 35.0%
AATTAAGTGTCTTCCTATGG+CGG + chr4.4:44867980-44867999 MS.gene08723:intron 35.0%
ACCACTTTATGAATCACCAA+AGG + chr4.4:44866485-44866504 MS.gene08723:CDS 35.0%
ACTTTATGAATCACCAAAGG+TGG + chr4.4:44866488-44866507 MS.gene08723:CDS 35.0%
AGAAGAGCTACTTAGATTCT+TGG - chr4.4:44866954-44866973 None:intergenic 35.0%
AGAAGGGAACAAAACTTAAC+TGG - chr4.4:44867911-44867930 None:intergenic 35.0%
AGCTTTACAAGACATCACAT+TGG + chr4.4:44868800-44868819 MS.gene08723:CDS 35.0%
ATAGAAAGTAGTAGTAGTGG+TGG + chr4.4:44864121-44864140 MS.gene08723:CDS 35.0%
CAAATCTGAAGGTTACACAA+AGG - chr4.4:44866026-44866045 None:intergenic 35.0%
CAATGAACAGTGTTATCTTC+TGG - chr4.4:44869077-44869096 None:intergenic 35.0%
CACTATACATAGCATGCTAA+TGG - chr4.4:44867375-44867394 None:intergenic 35.0%
CATTGAACCTAAACAGATCA+AGG + chr4.4:44864291-44864310 MS.gene08723:CDS 35.0%
CATTGAGCTTATTTACACAC+AGG + chr4.4:44865955-44865974 MS.gene08723:CDS 35.0%
CCGAATAAGATGTAAAAGTG+TGG + chr4.4:44865758-44865777 MS.gene08723:intron 35.0%
CTGTGTGTAAATAAGCTCAA+TGG - chr4.4:44865957-44865976 None:intergenic 35.0%
CTTGAAGTTATTAGGCTTGA+AGG + chr4.4:44867480-44867499 MS.gene08723:CDS 35.0%
CTTTCACAAACCTTCAAAAG+TGG - chr4.4:44866214-44866233 None:intergenic 35.0%
GAACACAATTGAACATGAAG+AGG + chr4.4:44867289-44867308 MS.gene08723:CDS 35.0%
GATAGGCACTTCGATATATT+AGG + chr4.4:44866613-44866632 MS.gene08723:intron 35.0%
GATTTAAGTGGTCTACAATG+TGG - chr4.4:44866354-44866373 None:intergenic 35.0%
GGTGGTTCTTATGTTTAGAA+AGG + chr4.4:44868642-44868661 MS.gene08723:intron 35.0%
GGTTCAATGTTGGAAAGAAT+AGG - chr4.4:44864280-44864299 None:intergenic 35.0%
GTCTTTGCCATTAAAAGGTT+AGG + chr4.4:44865363-44865382 MS.gene08723:intron 35.0%
TACACTACAACTTTGGACAA+TGG + chr4.4:44866103-44866122 MS.gene08723:CDS 35.0%
TACTGATGCAAGTTGTGATT+CGG + chr4.4:44864993-44865012 MS.gene08723:CDS 35.0%
TAGAGAGAAGCAAAGAAAAG+AGG + chr4.4:44864435-44864454 MS.gene08723:CDS 35.0%
TATGCTGTTCATTGAAGGTA+TGG + chr4.4:44868588-44868607 MS.gene08723:intron 35.0%
TATGTCTGTAGCAAATCTGA+AGG - chr4.4:44866037-44866056 None:intergenic 35.0%
TCAAAATGTCTTCAGTGTTG+TGG + chr4.4:44867346-44867365 MS.gene08723:intron 35.0%
TCTATTTCATTGTATGGTGG+CGG + chr4.4:44868618-44868637 MS.gene08723:intron 35.0%
TCTGGGAACATTTCATCAAT+TGG - chr4.4:44867836-44867855 None:intergenic 35.0%
TCTTCTTGCAGATATGTAGT+GGG + chr4.4:44867765-44867784 MS.gene08723:intron 35.0%
TGCAATGAACAAGTTGTTGA+TGG + chr4.4:44864492-44864511 MS.gene08723:CDS 35.0%
TGCAGATGCTTGAAGTTATT+AGG + chr4.4:44867472-44867491 MS.gene08723:intron 35.0%
TGTTTAGAAAGGAAGTTGGA+AGG + chr4.4:44868653-44868672 MS.gene08723:intron 35.0%
TTCTTCTTGCAGATATGTAG+TGG + chr4.4:44867764-44867783 MS.gene08723:intron 35.0%
TTGAATCTAATGGGATGATG+CGG - chr4.4:44867886-44867905 None:intergenic 35.0%
TTTGACAGAGTTCCTTTCAA+AGG + chr4.4:44865182-44865201 MS.gene08723:CDS 35.0%
TTTGATGAACTCAACTTGCA+TGG - chr4.4:44865809-44865828 None:intergenic 35.0%
! AATGAACAAGTTGTTGATGG+AGG + chr4.4:44864495-44864514 MS.gene08723:CDS 35.0%
! AATTAGTGGTCATGGCTTTT+AGG + chr4.4:44865518-44865537 MS.gene08723:intron 35.0%
! ACCTTTGGTGATTCATAAAG+TGG - chr4.4:44866489-44866508 None:intergenic 35.0%
! ATTTTCAACAGTGTCCGTTT+TGG + chr4.4:44867068-44867087 MS.gene08723:intron 35.0%
! GATCTGTTTAGGTTCAATGT+TGG - chr4.4:44864290-44864309 None:intergenic 35.0%
! GTAAATGGATTCAGTGATGA+TGG + chr4.4:44866872-44866891 MS.gene08723:CDS 35.0%
! GTTAGTCCCTAACCTTTTAA+TGG - chr4.4:44865373-44865392 None:intergenic 35.0%
! TACTGAACAAGTTGAAGCAT+TGG + chr4.4:44864189-44864208 MS.gene08723:CDS 35.0%
! TGTGTGAGAATGGATTTATG+AGG + chr4.4:44864554-44864573 MS.gene08723:CDS 35.0%
! TGTTGATGGAGGAAAATGAT+AGG + chr4.4:44864506-44864525 MS.gene08723:CDS 35.0%
! TTATTCTTGTCTTTTAGCCG+TGG + chr4.4:44866442-44866461 MS.gene08723:intron 35.0%
! TTTTCAACAGTGTCCGTTTT+GGG + chr4.4:44867069-44867088 MS.gene08723:intron 35.0%
! TTTTGCCAAGTTAATGCAAC+AGG + chr4.4:44868866-44868885 MS.gene08723:CDS 35.0%
!! AACAAGTTGAAGCATTGGAA+AGG + chr4.4:44864194-44864213 MS.gene08723:CDS 35.0%
!! ACAAGTTGAAGCATTGGAAA+GGG + chr4.4:44864195-44864214 MS.gene08723:CDS 35.0%
!! CACTTTTGAAGGTTTGTGAA+AGG + chr4.4:44866212-44866231 MS.gene08723:intron 35.0%
!! CATAATTCTACTTTTCGTGG+AGG + chr4.4:44864620-44864639 MS.gene08723:intron 35.0%
!! CTATGCCGATTTGAAAATGA+AGG + chr4.4:44865570-44865589 MS.gene08723:intron 35.0%
!! CTTGGCCTTCATTTTCAAAT+CGG - chr4.4:44865578-44865597 None:intergenic 35.0%
!! TTATTGGTGCCTTTTGTGAT+AGG + chr4.4:44866596-44866615 MS.gene08723:intron 35.0%
!!! TCTGTTTTAGGGTGATAAGA+AGG + chr4.4:44868059-44868078 MS.gene08723:intron 35.0%
AAATAAGAGACCTTCATCCC+AGG - chr4.4:44865240-44865259 None:intergenic 40.0%
AAATCGATAGACCAGAACTG+TGG - chr4.4:44866771-44866790 None:intergenic 40.0%
AACCACCTGTTGCATTAACT+TGG - chr4.4:44868874-44868893 None:intergenic 40.0%
AAGCAGTTACACTAGCTCAA+TGG + chr4.4:44868364-44868383 MS.gene08723:CDS 40.0%
AAGCCTAAAAATTACCCAGC+AGG - chr4.4:44865060-44865079 None:intergenic 40.0%
AAGGTTAGGGACTAACATAG+CGG + chr4.4:44865377-44865396 MS.gene08723:intron 40.0%
AATCGATAGACCAGAACTGT+GGG - chr4.4:44866770-44866789 None:intergenic 40.0%
AATGGATCTGCCAGAGTTAT+AGG + chr4.4:44868382-44868401 MS.gene08723:CDS 40.0%
AATTCCTCCAAGCAATGTGA+GGG - chr4.4:44866990-44867009 None:intergenic 40.0%
ACTTGATGCTGAAACAACTG+TGG + chr4.4:44868546-44868565 MS.gene08723:CDS 40.0%
AGCAAAGAAAAGAGGCTTCA+AGG + chr4.4:44864443-44864462 MS.gene08723:CDS 40.0%
AGCCTAAAAATTACCCAGCA+GGG - chr4.4:44865059-44865078 None:intergenic 40.0%
AGGCAATAGTCAACACTGAT+CGG - chr4.4:44868185-44868204 None:intergenic 40.0%
ATAAGCTGAGCCAGATCTAT+CGG + chr4.4:44867614-44867633 MS.gene08723:intron 40.0%
ATCTAAGAGTCCAGAAATCC+CGG - chr4.4:44866084-44866103 None:intergenic 40.0%
CAAGGCTTCAAACTGTGAAT+AGG + chr4.4:44864461-44864480 MS.gene08723:CDS 40.0%
CTGAGATCAGATTCTCTTGT+TGG + chr4.4:44868521-44868540 MS.gene08723:CDS 40.0%
CTGATGTATTACATCTGCAG+AGG + chr4.4:44866836-44866855 MS.gene08723:intron 40.0%
CTTGCATAGTGCTGTCAAAA+GGG - chr4.4:44868215-44868234 None:intergenic 40.0%
GCATCTCTCTTAGAATTCTG+AGG - chr4.4:44865030-44865049 None:intergenic 40.0%
GCGATTTCACAAAGTTGTAG+TGG + chr4.4:44865674-44865693 MS.gene08723:CDS 40.0%
TAAAGTGGTCGTAGTACTTC+TGG - chr4.4:44866474-44866493 None:intergenic 40.0%
TAGGGATATTCACCTGTTAC+AGG + chr4.4:44867536-44867555 MS.gene08723:CDS 40.0%
TCTTGCATAGTGCTGTCAAA+AGG - chr4.4:44868216-44868235 None:intergenic 40.0%
TGATTGCCAGTGAATCTTGT+AGG - chr4.4:44867251-44867270 None:intergenic 40.0%
TGGTCTATACTGAACTGTGA+CGG + chr4.4:44866896-44866915 MS.gene08723:CDS 40.0%
TGTAGACTTGCCTATAACTC+TGG - chr4.4:44868395-44868414 None:intergenic 40.0%
TGTTAGCACTTTCCATGCAA+TGG - chr4.4:44869054-44869073 None:intergenic 40.0%
TGTTCAATTGTGTTCCCAAG+AGG - chr4.4:44867284-44867303 None:intergenic 40.0%
TGTTGTCTTCTCATGGAACT+AGG - chr4.4:44864241-44864260 None:intergenic 40.0%
TTATGAATCACCAAAGGTGG+TGG + chr4.4:44866491-44866510 MS.gene08723:CDS 40.0%
TTGCAGACTCCTATCAATTG+CGG + chr4.4:44865152-44865171 MS.gene08723:intron 40.0%
TTGCATACTGTAAGTGTGTG+AGG + chr4.4:44864583-44864602 MS.gene08723:intron 40.0%
! AACCCTGCTGGGTAATTTTT+AGG + chr4.4:44865054-44865073 MS.gene08723:intron 40.0%
! AGGTTTGGTTCCAAAATCGA+AGG + chr4.4:44864311-44864330 MS.gene08723:CDS 40.0%
! AGTAAGGCATTACCTGTAAC+AGG - chr4.4:44867551-44867570 None:intergenic 40.0%
! ATCGAAGTGCCTATCACAAA+AGG - chr4.4:44866608-44866627 None:intergenic 40.0%
! GAGTTGTTTCCAACATGTCA+AGG - chr4.4:44868776-44868795 None:intergenic 40.0%
! GGTGAGTATGTTTTGTCATC+TGG + chr4.4:44866135-44866154 MS.gene08723:intron 40.0%
! GTTTTCACAATGTTTCCTGC+CGG + chr4.4:44865920-44865939 MS.gene08723:CDS 40.0%
! TACAGGAACTGCTGTTGATT+GGG + chr4.4:44865206-44865225 MS.gene08723:CDS 40.0%
! TACTTGATTCGACCATGTGA+TGG + chr4.4:44866313-44866332 MS.gene08723:CDS 40.0%
! TTCACAAAGTTGTAGTGGAG+TGG + chr4.4:44865679-44865698 MS.gene08723:CDS 40.0%
!! ATGGATTCAGTGATGATGGT+TGG + chr4.4:44866876-44866895 MS.gene08723:CDS 40.0%
!! GGCCTTGGAGTTGATATTAA+TGG + chr4.4:44864924-44864943 MS.gene08723:intron 40.0%
!!! ATTTTTTGAGCCACCACCTT+TGG - chr4.4:44866504-44866523 None:intergenic 40.0%
!!! GGTTTTGGTTCGCTTTCTAA+GGG + chr4.4:44867136-44867155 MS.gene08723:CDS 40.0%
AAAGTTTGGCACCAACAGCT+GGG - chr4.4:44868329-44868348 None:intergenic 45.0%
AACAGCATAAAATCGCGTCC+TGG - chr4.4:44868577-44868596 None:intergenic 45.0%
AAGTCTCCTCCGCAATTGAT+AGG - chr4.4:44865164-44865183 None:intergenic 45.0%
ACAATGTTTCCTGCCGGAAA+TGG + chr4.4:44865926-44865945 MS.gene08723:CDS 45.0%
ACCAACAGCTGGGTTTATAC+CGG - chr4.4:44868319-44868338 None:intergenic 45.0%
ATGAGGCCTACAAGATTCAC+TGG + chr4.4:44867242-44867261 MS.gene08723:CDS 45.0%
CAAATAGCTCAGGAATCGAG+TGG + chr4.4:44866636-44866655 MS.gene08723:CDS 45.0%
CAGTTCCTGTAGCCTTTGAA+AGG - chr4.4:44865197-44865216 None:intergenic 45.0%
CATCTTCTTGAGCAAGAGAG+TGG - chr4.4:44867506-44867525 None:intergenic 45.0%
CATGCACTAAGTTAAGGCCT+TGG + chr4.4:44864909-44864928 MS.gene08723:intron 45.0%
CATTCAGCCAAAGATTGAGC+AGG + chr4.4:44866703-44866722 MS.gene08723:CDS 45.0%
CTACAGGAACTGCTGTTGAT+TGG + chr4.4:44865205-44865224 MS.gene08723:CDS 45.0%
CTCAATGGTTCCTCCATTTC+CGG - chr4.4:44865942-44865961 None:intergenic 45.0%
CTGAATGTTCGCAAAACAGC+AGG - chr4.4:44866690-44866709 None:intergenic 45.0%
CTTCTCATGGAACTAGGCTT+AGG - chr4.4:44864235-44864254 None:intergenic 45.0%
GAATTCCTCCAAGCAATGTG+AGG - chr4.4:44866991-44867010 None:intergenic 45.0%
GAGCAGCAGCAGTTGAATTA+GGG - chr4.4:44866261-44866280 None:intergenic 45.0%
GAGTTCCTTTCAAAGGCTAC+AGG + chr4.4:44865189-44865208 MS.gene08723:CDS 45.0%
GCGGATGAATGTGATGACTT+TGG + chr4.4:44867999-44868018 MS.gene08723:intron 45.0%
GCTGTCAAAAGGGAACTGAA+AGG - chr4.4:44868205-44868224 None:intergenic 45.0%
GGCAATAGTCAACACTGATC+GGG - chr4.4:44868184-44868203 None:intergenic 45.0%
GGCTCAGCTTATGTAAGAAG+AGG - chr4.4:44867606-44867625 None:intergenic 45.0%
GGCTTCAATGACGCTGTAAA+TGG + chr4.4:44866857-44866876 MS.gene08723:CDS 45.0%
GGTGAAGTGGTATACGGATT+AGG + chr4.4:44866657-44866676 MS.gene08723:CDS 45.0%
GTTTATACCGGACGGTGAAA+TGG - chr4.4:44868307-44868326 None:intergenic 45.0%
TATCTTGGTTTCGCGAGTGT+CGG + chr4.4:44865888-44865907 MS.gene08723:CDS 45.0%
TCACAGCTTGTGTGTGAGAA+TGG + chr4.4:44864544-44864563 MS.gene08723:CDS 45.0%
TCATCACATTCATCCGCCAT+AGG - chr4.4:44867996-44868015 None:intergenic 45.0%
TCGAGTGGTGAAGTGGTATA+CGG + chr4.4:44866651-44866670 MS.gene08723:CDS 45.0%
TCTAAGAGTCCAGAAATCCC+GGG - chr4.4:44866083-44866102 None:intergenic 45.0%
TGAAATCAGCCCATTCTGAG+CGG - chr4.4:44867166-44867185 None:intergenic 45.0%
TGAGCAGCAGCAGTTGAATT+AGG - chr4.4:44866262-44866281 None:intergenic 45.0%
TGAGCTAGTGTAACTGCTTC+TGG - chr4.4:44868363-44868382 None:intergenic 45.0%
TGCCAAGTTAATGCAACAGG+TGG + chr4.4:44868869-44868888 MS.gene08723:intron 45.0%
TGGAGAACCAGGAGAAAGTT+TGG - chr4.4:44868343-44868362 None:intergenic 45.0%
TGTGATTTCCTCTGTGCAGA+GGG + chr4.4:44868272-44868291 MS.gene08723:CDS 45.0%
TTTGGACAATGGCAGTCTTG+TGG + chr4.4:44866114-44866133 MS.gene08723:CDS 45.0%
! GCATCAGTATTTGCTGCTGA+TGG - chr4.4:44864982-44865001 None:intergenic 45.0%
! TTGATTCGACCATGTGATGG+TGG + chr4.4:44866316-44866335 MS.gene08723:CDS 45.0%
!! ATTTCATTGTATGGTGGCGG+AGG + chr4.4:44868621-44868640 MS.gene08723:intron 45.0%
!!! CGGTTTTGGTTCGCTTTCTA+AGG + chr4.4:44867135-44867154 MS.gene08723:CDS 45.0%
!! AAAATTTATTATAAATGAAT+TGG - chr4.4:44864872-44864891 None:intergenic 5.0%
AAGGGAACACCGCTCAGAAT+GGG + chr4.4:44867154-44867173 MS.gene08723:CDS 50.0%
AATCTTGTAGGCCTCATCCC+TGG - chr4.4:44867239-44867258 None:intergenic 50.0%
ACAGCTGGGTTTATACCGGA+CGG - chr4.4:44868315-44868334 None:intergenic 50.0%
AGAAAGCGAACCAAAACCGC+TGG - chr4.4:44867134-44867153 None:intergenic 50.0%
AGAGATGCTACTAACCCTGC+TGG + chr4.4:44865042-44865061 MS.gene08723:CDS 50.0%
AGCAATGTGAGGGAACTTGC+TGG - chr4.4:44866980-44866999 None:intergenic 50.0%
AGTACTTCTGGCACACTCCA+CGG - chr4.4:44866462-44866481 None:intergenic 50.0%
AGTTCCCTCACATTGCTTGG+AGG + chr4.4:44866983-44867002 MS.gene08723:CDS 50.0%
ATGTTTCCTGCCGGAAATGG+AGG + chr4.4:44865929-44865948 MS.gene08723:CDS 50.0%
ATTGAACCGCCACCATCACA+TGG - chr4.4:44866328-44866347 None:intergenic 50.0%
ATTTGACGAGTCTGGTCGCA+AGG + chr4.4:44868830-44868849 MS.gene08723:CDS 50.0%
CAGACTCCTATCAATTGCGG+AGG + chr4.4:44865155-44865174 MS.gene08723:intron 50.0%
CAGGAACCTATGCCTATCCA+GGG + chr4.4:44867219-44867238 MS.gene08723:CDS 50.0%
CTGACGTCAAATCCAGTGTC+CGG - chr4.4:44868101-44868120 None:intergenic 50.0%
GAAACAACTGTGGCATCACC+AGG + chr4.4:44868556-44868575 MS.gene08723:CDS 50.0%
GAAAGTTTGGCACCAACAGC+TGG - chr4.4:44868330-44868349 None:intergenic 50.0%
GACATATGCTCCAACAACGC+TGG + chr4.4:44866051-44866070 MS.gene08723:intron 50.0%
GAGATGCTACTAACCCTGCT+GGG + chr4.4:44865043-44865062 MS.gene08723:CDS 50.0%
GCAAAGATCCCAACCGAATC+CGG - chr4.4:44865656-44865675 None:intergenic 50.0%
GCAAGTTCCCTCACATTGCT+TGG + chr4.4:44866980-44866999 MS.gene08723:CDS 50.0%
GGACTGATGAGAACGCTGTT+GGG + chr4.4:44867786-44867805 MS.gene08723:CDS 50.0%
GGATCTGCATGTCGACAATG+GGG + chr4.4:44869006-44869025 MS.gene08723:CDS 50.0%
GGGATCTGCATGTCGACAAT+GGG + chr4.4:44869005-44869024 MS.gene08723:CDS 50.0%
GGTCGAATCAAGTAGCCACT+CGG - chr4.4:44866307-44866326 None:intergenic 50.0%
GTCGAATCAAGTAGCCACTC+GGG - chr4.4:44866306-44866325 None:intergenic 50.0%
GTGAACCCAACGACAACTCA+CGG + chr4.4:44868129-44868148 MS.gene08723:CDS 50.0%
GTGGCTACCTGCTCAATCTT+TGG - chr4.4:44866713-44866732 None:intergenic 50.0%
GTGTGATTTCCTCTGTGCAG+AGG + chr4.4:44868271-44868290 MS.gene08723:CDS 50.0%
GTTCCCAGATGATGCTCCAT+TGG + chr4.4:44867847-44867866 MS.gene08723:CDS 50.0%
GTTTGTGAAAGGTCCCTGTC+TGG + chr4.4:44866223-44866242 MS.gene08723:CDS 50.0%
TAAGGGAACACCGCTCAGAA+TGG + chr4.4:44867153-44867172 MS.gene08723:CDS 50.0%
TCAGGAATCGAGTGGTGAAG+TGG + chr4.4:44866644-44866663 MS.gene08723:CDS 50.0%
TCCGGTATAAACCCAGCTGT+TGG + chr4.4:44868315-44868334 MS.gene08723:CDS 50.0%
TCCTGCTTTCAGTGATGCAG+CGG - chr4.4:44867204-44867223 None:intergenic 50.0%
TGGGATCTGCATGTCGACAA+TGG + chr4.4:44869004-44869023 MS.gene08723:CDS 50.0%
TGTTATTCTCTTGGCCAGCC+TGG + chr4.4:44865629-44865648 MS.gene08723:intron 50.0%
TTGATTGGGTCCAGATGCCT+GGG + chr4.4:44865220-44865239 MS.gene08723:CDS 50.0%
TTTGGTATTGCAGTCGCAGC+CGG + chr4.4:44868725-44868744 MS.gene08723:intron 50.0%
! GCACCAATGGAGCATCATCT+GGG - chr4.4:44867853-44867872 None:intergenic 50.0%
! GGTTTGCTTATCTGCCAGCT+GGG + chr4.4:44868985-44869004 MS.gene08723:CDS 50.0%
! GTAACTGCTTCTGGAGAACC+AGG - chr4.4:44868354-44868373 None:intergenic 50.0%
!! ATTCGACCATGTGATGGTGG+CGG + chr4.4:44866319-44866338 MS.gene08723:CDS 50.0%
!! GTTGGTGCCAAACTTTCTCC+TGG + chr4.4:44868333-44868352 MS.gene08723:CDS 50.0%
!! TCAAGCTGGCCTTGACATGT+TGG + chr4.4:44868764-44868783 MS.gene08723:CDS 50.0%
AAGCGAACCAAAACCGCTGG+AGG - chr4.4:44867131-44867150 None:intergenic 55.0%
AGACCTTCATCCCAGGCATC+TGG - chr4.4:44865233-44865252 None:intergenic 55.0%
AGAGCTGAAATGCTCCCGAG+TGG + chr4.4:44866289-44866308 MS.gene08723:CDS 55.0%
ATGGTTCCTCCATTTCCGGC+AGG - chr4.4:44865938-44865957 None:intergenic 55.0%
CACTGCCGTGAGTTGTCGTT+GGG - chr4.4:44868137-44868156 None:intergenic 55.0%
CCTATGCCTATCCAGGGATG+AGG + chr4.4:44867225-44867244 MS.gene08723:CDS 55.0%
CCTCATCCCTGGATAGGCAT+AGG - chr4.4:44867228-44867247 None:intergenic 55.0%
CGGACACTGGATTTGACGTC+AGG + chr4.4:44868099-44868118 MS.gene08723:CDS 55.0%
CGTACGAGCAAGCCATTGCA+TGG + chr4.4:44869039-44869058 MS.gene08723:CDS 55.0%
CTTGCAGAACGTTCCTCCAG+CGG + chr4.4:44867115-44867134 MS.gene08723:intron 55.0%
GCAGGAACCTATGCCTATCC+AGG + chr4.4:44867218-44867237 MS.gene08723:CDS 55.0%
GGGACTGATGAGAACGCTGT+TGG + chr4.4:44867785-44867804 MS.gene08723:CDS 55.0%
GGGATGATGCGGAAACCAGA+AGG - chr4.4:44867875-44867894 None:intergenic 55.0%
GTCATACGTGCCCACAGTTC+TGG + chr4.4:44866757-44866776 MS.gene08723:intron 55.0%
GTGGGCACGTATGACCTTCA+AGG - chr4.4:44866752-44866771 None:intergenic 55.0%
GTTGATTGGGTCCAGATGCC+TGG + chr4.4:44865219-44865238 MS.gene08723:CDS 55.0%
TCCGCTGCATCACTGAAAGC+AGG + chr4.4:44867200-44867219 MS.gene08723:CDS 55.0%
TCTGCATGTCGACAATGGGG+CGG + chr4.4:44869009-44869028 MS.gene08723:CDS 55.0%
TGTAGGCCTCATCCCTGGAT+AGG - chr4.4:44867234-44867253 None:intergenic 55.0%
! GAAAGGTCCCTGTCTGGTTC+TGG + chr4.4:44866229-44866248 MS.gene08723:CDS 55.0%
! GAACGTTCCTCCAGCGGTTT+TGG + chr4.4:44867121-44867140 MS.gene08723:intron 55.0%
! GATGCTCCATTGGTGCCTTC+TGG + chr4.4:44867857-44867876 MS.gene08723:CDS 55.0%
! GGCACCAATGGAGCATCATC+TGG - chr4.4:44867854-44867873 None:intergenic 55.0%
! GGGTTTGCTTATCTGCCAGC+TGG + chr4.4:44868984-44869003 MS.gene08723:CDS 55.0%
!! CGGAAACCAGAAGGCACCAA+TGG - chr4.4:44867866-44867885 None:intergenic 55.0%
!! TCATTGTATGGTGGCGGAGG+TGG + chr4.4:44868624-44868643 MS.gene08723:intron 55.0%
ACCGGACGGTGAAATGGCCA+TGG - chr4.4:44868301-44868320 None:intergenic 60.0%
ACTGAACTGTGACGGCGCTG+AGG + chr4.4:44866904-44866923 MS.gene08723:CDS 60.0%
AGAGTCCAGAAATCCCGGGC+CGG - chr4.4:44866079-44866098 None:intergenic 60.0%
ATCCCAACCGAATCCGGACC+AGG - chr4.4:44865650-44865669 None:intergenic 60.0%
CATGGCAACCCTCTGCACAG+AGG - chr4.4:44868283-44868302 None:intergenic 60.0%
CTCTGTGCAGAGGGTTGCCA+TGG + chr4.4:44868281-44868300 MS.gene08723:CDS 60.0%
GCACTGCCGTGAGTTGTCGT+TGG - chr4.4:44868138-44868157 None:intergenic 60.0%
GCCAGTGCCAGAACCAGACA+GGG - chr4.4:44866239-44866258 None:intergenic 60.0%
GCCATGGCCATTTCACCGTC+CGG + chr4.4:44868297-44868316 MS.gene08723:CDS 60.0%
GGTCCAGATGCCTGGGATGA+AGG + chr4.4:44865227-44865246 MS.gene08723:CDS 60.0%
GTCGACATGCAGATCCCAGC+TGG - chr4.4:44869002-44869021 None:intergenic 60.0%
TTCTCTTGGCCAGCCTGGTC+CGG + chr4.4:44865634-44865653 MS.gene08723:intron 60.0%
! AGCCTGGTCCGGATTCGGTT+GGG + chr4.4:44865645-44865664 MS.gene08723:intron 60.0%
!! TCCCTGTCTGGTTCTGGCAC+TGG + chr4.4:44866235-44866254 MS.gene08723:CDS 60.0%
!! TGCTCCAACAACGCTGGCTC+CGG + chr4.4:44866057-44866076 MS.gene08723:CDS 60.0%
CAACCGAATCCGGACCAGGC+TGG - chr4.4:44865646-44865665 None:intergenic 65.0%
GGAGTGGCAGCTCGAGCTTG+CGG + chr4.4:44865695-44865714 MS.gene08723:CDS 65.0%
GGCCAGTGCCAGAACCAGAC+AGG - chr4.4:44866240-44866259 None:intergenic 65.0%
TGGCCAGCCTGGTCCGGATT+CGG + chr4.4:44865640-44865659 MS.gene08723:intron 65.0%
! CAGCCTGGTCCGGATTCGGT+TGG + chr4.4:44865644-44865663 MS.gene08723:intron 65.0%
TGGCTCCGGCCCGGGATTTC+TGG + chr4.4:44866071-44866090 MS.gene08723:CDS 70.0%
!! AACAACGCTGGCTCCGGCCC+GGG + chr4.4:44866063-44866082 MS.gene08723:CDS 70.0%
!! CAACAACGCTGGCTCCGGCC+CGG + chr4.4:44866062-44866081 MS.gene08723:CDS 70.0%
CGGGCCGGAGCCAGCGTTGT+TGG - chr4.4:44866064-44866083 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 44864091 44869133 44864091 ID=MS.gene08723
chr4.4 mRNA 44864091 44869133 44864091 ID=MS.gene08723.t1;Parent=MS.gene08723
chr4.4 exon 44864091 44864332 44864091 ID=MS.gene08723.t1.exon1;Parent=MS.gene08723.t1
chr4.4 CDS 44864091 44864332 44864091 ID=cds.MS.gene08723.t1;Parent=MS.gene08723.t1
chr4.4 exon 44864432 44864591 44864432 ID=MS.gene08723.t1.exon2;Parent=MS.gene08723.t1
chr4.4 CDS 44864432 44864591 44864432 ID=cds.MS.gene08723.t1;Parent=MS.gene08723.t1
chr4.4 exon 44864979 44865064 44864979 ID=MS.gene08723.t1.exon3;Parent=MS.gene08723.t1
chr4.4 CDS 44864979 44865064 44864979 ID=cds.MS.gene08723.t1;Parent=MS.gene08723.t1
chr4.4 exon 44865158 44865248 44865158 ID=MS.gene08723.t1.exon4;Parent=MS.gene08723.t1
chr4.4 CDS 44865158 44865248 44865158 ID=cds.MS.gene08723.t1;Parent=MS.gene08723.t1
chr4.4 exon 44865647 44865742 44865647 ID=MS.gene08723.t1.exon5;Parent=MS.gene08723.t1
chr4.4 CDS 44865647 44865742 44865647 ID=cds.MS.gene08723.t1;Parent=MS.gene08723.t1
chr4.4 exon 44865863 44865976 44865863 ID=MS.gene08723.t1.exon6;Parent=MS.gene08723.t1
chr4.4 CDS 44865863 44865976 44865863 ID=cds.MS.gene08723.t1;Parent=MS.gene08723.t1
chr4.4 exon 44866052 44866135 44866052 ID=MS.gene08723.t1.exon7;Parent=MS.gene08723.t1
chr4.4 CDS 44866052 44866135 44866052 ID=cds.MS.gene08723.t1;Parent=MS.gene08723.t1
chr4.4 exon 44866223 44866378 44866223 ID=MS.gene08723.t1.exon8;Parent=MS.gene08723.t1
chr4.4 CDS 44866223 44866378 44866223 ID=cds.MS.gene08723.t1;Parent=MS.gene08723.t1
chr4.4 exon 44866459 44866533 44866459 ID=MS.gene08723.t1.exon9;Parent=MS.gene08723.t1
chr4.4 CDS 44866459 44866533 44866459 ID=cds.MS.gene08723.t1;Parent=MS.gene08723.t1
chr4.4 exon 44866618 44866724 44866618 ID=MS.gene08723.t1.exon10;Parent=MS.gene08723.t1
chr4.4 CDS 44866618 44866724 44866618 ID=cds.MS.gene08723.t1;Parent=MS.gene08723.t1
chr4.4 exon 44866856 44867039 44866856 ID=MS.gene08723.t1.exon11;Parent=MS.gene08723.t1
chr4.4 CDS 44866856 44867039 44866856 ID=cds.MS.gene08723.t1;Parent=MS.gene08723.t1
chr4.4 exon 44867122 44867310 44867122 ID=MS.gene08723.t1.exon12;Parent=MS.gene08723.t1
chr4.4 CDS 44867122 44867310 44867122 ID=cds.MS.gene08723.t1;Parent=MS.gene08723.t1
chr4.4 exon 44867477 44867557 44867477 ID=MS.gene08723.t1.exon13;Parent=MS.gene08723.t1
chr4.4 CDS 44867477 44867557 44867477 ID=cds.MS.gene08723.t1;Parent=MS.gene08723.t1
chr4.4 exon 44867776 44867910 44867776 ID=MS.gene08723.t1.exon14;Parent=MS.gene08723.t1
chr4.4 CDS 44867776 44867910 44867776 ID=cds.MS.gene08723.t1;Parent=MS.gene08723.t1
chr4.4 exon 44868069 44868403 44868069 ID=MS.gene08723.t1.exon15;Parent=MS.gene08723.t1
chr4.4 CDS 44868069 44868403 44868069 ID=cds.MS.gene08723.t1;Parent=MS.gene08723.t1
chr4.4 exon 44868499 44868604 44868499 ID=MS.gene08723.t1.exon16;Parent=MS.gene08723.t1
chr4.4 CDS 44868499 44868604 44868499 ID=cds.MS.gene08723.t1;Parent=MS.gene08723.t1
chr4.4 exon 44868738 44868887 44868738 ID=MS.gene08723.t1.exon17;Parent=MS.gene08723.t1
chr4.4 CDS 44868738 44868887 44868738 ID=cds.MS.gene08723.t1;Parent=MS.gene08723.t1
chr4.4 exon 44868984 44869133 44868984 ID=MS.gene08723.t1.exon18;Parent=MS.gene08723.t1
chr4.4 CDS 44868984 44869133 44868984 ID=cds.MS.gene08723.t1;Parent=MS.gene08723.t1
Gene Sequence

>MS.gene08723

ATGGCTATGGCTATGGCTGTGGCTCATCATATAGAAAGTAGTAGTAGTGGTGGAAGCATTGATAAGCATCTAGATTCAGGGAAATATGTTAGGTACACTACTGAACAAGTTGAAGCATTGGAAAGGGTTTATGCTGAGTGTCCTAAGCCTAGTTCCATGAGAAGACAACAATTGATTCGTGAGTGTCCTATTCTTTCCAACATTGAACCTAAACAGATCAAGGTTTGGTTCCAAAATCGAAGGTATTGAAAACTTTGGTTTTTATAAGTTTGAGCTTCATTGGTATGTGTGAAATCAGCACTTAGTTTTGTTTTGTTTTTTTGGTGTTTAATGTTTTGCAGGTGTAGAGAGAAGCAAAGAAAAGAGGCTTCAAGGCTTCAAACTGTGAATAGGAAATTGTCTGCAATGAACAAGTTGTTGATGGAGGAAAATGATAGGTTGCAGAAACAAGTGTCACAGCTTGTGTGTGAGAATGGATTTATGAGGCAACAATTGCATACTGTAAGTGTGTGAGGAACATGTTTCATGTCATAATTCTACTTTTCGTGGAGGCAAAATTGATTCTATACGAGTAGAATTGATTTTGACATGTTTGGATTTTTTCGATTAGAAGTGATTCCAATTTAATGCTAGAATTCAATACCTTTTCCTCTACAATTGATTACTATATTAAATTCAAATTTGTTGTTCAATTCACTTTGACATGAACGGACACGAACGTATTCAAATATAAATCACTTTACGTTAACTCACTTTTAGCCTGAATCAATTTAACAAACCAATTCATTTATAATAAATTTTTGTCACCAAAAAACAAACATGCACTAAGTTAAGGCCTTGGAGTTGATATTAATGGATATTGTATTTGGTTGCTTTGATCTTATGCAGCCATCAGCAGCAAATACTGATGCAAGTTGTGATTCGGTAGTTACTACTCCTCAGAATTCTAAGAGAGATGCTACTAACCCTGCTGGGTAATTTTTAGGCTTATGAAATGAACTTTTTGTGATTTTTTTTTCTGTCTTGAAGGTTTCCTAATTCTTTTTCTATTGTGTAATCATTTGCAGACTCCTATCAATTGCGGAGGAGACTTTGACAGAGTTCCTTTCAAAGGCTACAGGAACTGCTGTTGATTGGGTCCAGATGCCTGGGATGAAGGTCTCTTATTTGTATTCCTTGCTGTAAATTTAGTACGAACAAAACATCGATTTAGTCCCTAAAATATGACTCTCTCCAATAAAGTCTCTAAAGTATATGATATCTGTCATTTTAGTCTTTGCCATTAAAAGGTTAGGGACTAACATAGCGGATTTGCATATACTTAAAGAACTAAAATGAAGGATTTGATATTCTTTAAGGACTACTTATTAATTTTATATACTTTCAAGACTAAACTCGAGAAAGAGTAATACTTTAAAGACAATTGAAATTAGTGGTCATGGCTTTTAGGAGATAATAATTTTGATTTTCATTATGATACTATGCCGATTTGAAAATGAAGGCCAAGTTTTTTCTACTAAATTATCTTTGTATACATTTGTTATTCTCTTGGCCAGCCTGGTCCGGATTCGGTTGGGATCTTTGCGATTTCACAAAGTTGTAGTGGAGTGGCAGCTCGAGCTTGCGGTCTTGTTAGTTTAGAACCTACAAAGGTAAATTCCATACTTCCGAATAAGATGTAAAAGTGTGGTTTGCAATTTTTATGTCATTTGTTGCCATGCAAGTTGAGTTCATCAAACTGTATGAATTTCTAAATCCCGATTTTTTAACAGATTGCAGAGATCCTTAAAGATCGTTTATCTTGGTTTCGCGAGTGTCGGAACCTAGAAGTTTTCACAATGTTTCCTGCCGGAAATGGAGGAACCATTGAGCTTATTTACACACAGGTGAGCTTCAAATATAAATTTAGAGACTTGTGTTGATTTATTCATACCTTTGTGTAACCTTCAGATTTGCTACAGACATATGCTCCAACAACGCTGGCTCCGGCCCGGGATTTCTGGACTCTTAGATACACTACAACTTTGGACAATGGCAGTCTTGTGGTGAGTATGTTTTGTCATCTGGTGCATAGTAATAAAAGGAGTTGACTAATCTTACTTGACGCATATATTTTGATTCCACTTTTGAAGGTTTGTGAAAGGTCCCTGTCTGGTTCTGGCACTGGCCCTAATTCAACTGCTGCTGCTCAGTTTGTAAGAGCTGAAATGCTCCCGAGTGGCTACTTGATTCGACCATGTGATGGTGGCGGTTCAATCATCCACATTGTAGACCACTTAAATCTTGAAGTAATACATCTTAACCATATGAGATCATGTATACCTTTTCATTCATTACACACATTAATTTGTTTATTCTTGTCTTTTAGCCGTGGAGTGTGCCAGAAGTACTACGACCACTTTATGAATCACCAAAGGTGGTGGCTCAAAAAATGACCATTGCAGTAAGTTCACTATTATTAATCTGTAAAGTGTAAGATTCGTTGCAAAAGTTTGTTGACTAATGTTATTGGTGCCTTTTGTGATAGGCACTTCGATATATTAGGCAAATAGCTCAGGAATCGAGTGGTGAAGTGGTATACGGATTAGGTAGACAGCCTGCTGTTTTGCGAACATTCAGCCAAAGATTGAGCAGGTAGCCACATGAAATGATTTGTTTCCTTGAAGGTCATACGTGCCCACAGTTCTGGTCTATCGATTTTTACAGTATCATTCTTGATTTGTATATCAGTTTTTTGGCTGAAAACTGATGTATTACATCTGCAGAGGCTTCAATGACGCTGTAAATGGATTCAGTGATGATGGTTGGTCTATACTGAACTGTGACGGCGCTGAGGATGTAATTATTGCTGTTAATTCAACCAAGAATCTAAGTAGCTCTTCTAATCCAGCAAGTTCCCTCACATTGCTTGGAGGAATTCTCTGTGCAAAAGCTTCTATGTTGCTACAAGTGAGTCTTGTGAACTCGATGTCACAATATTTTCAACAGTGTCCGTTTTGGGATGTTAGTTTTTATACTGCTTTGCTTGCAGAACGTTCCTCCAGCGGTTTTGGTTCGCTTTCTAAGGGAACACCGCTCAGAATGGGCTGATTTCAATGTTGATGCATACTCCGCTGCATCACTGAAAGCAGGAACCTATGCCTATCCAGGGATGAGGCCTACAAGATTCACTGGCAATCAAATAATCATGCCTCTTGGGAACACAATTGAACATGAAGAGGTATTGTAATGTTTACATTCACTTCACATGCTTGATCAAAATGTCTTCAGTGTTGTGGAATCCATTAGCATGCTATGTATAGTGATGTCAACAATTTTTGATCTTATCACTAGAAACATTTGTTCATTCAAATTATGTTCCTGATGAAGTTAAATCTTCACTGCAGATGCTTGAAGTTATTAGGCTTGAAGGCCACTCTCTTGCTCAAGAAGATGCTTTTGTTTCTAGGGATATTCACCTGTTACAGGTAATGCCTTACTATTGATAAATTATTGAGCATTTTCCCTATCAACCTCTTCTTACATAAGCTGAGCCAGATCTATCGGTAATATATTATCTTCGGTAAAAATGGTTGAATTTTACAACCGATGAAATGATTTCTTGTATGTAGTTGTGGTCTAAACATAAACAAATATGATCAATATAGGTATGTACTGAGGTGTTTTATGTGTATTCTTCTTGCAGATATGTAGTGGGACTGATGAGAACGCTGTTGGGACTTGTTCTGAGCTCATATTTGCTCCAATTGATGAAATGTTCCCAGATGATGCTCCATTGGTGCCTTCTGGTTTCCGCATCATCCCATTAGATTCAAAACCAGTTAAGTTTTGTTCCCTTCTTTTTTCCTCTCTATTGAGCTAATTTTTCATCTTTTTCCTGATTTACTCAAATTAAGTGTCTTCCTATGGCGGATGAATGTGATGACTTTGGAGTTCAAATAATTTAATTTCACACGATGTTACTATTTTCTGTTTTAGGGTGATAAGAAGGATGCCGTGAATACAAACCGGACACTGGATTTGACGTCAGGTCTTGAAGTGAACCCAACGACAACTCACGGCAGTGCAGATTCATCATCAAGTCAAAACACCCGATCAGTGTTGACTATTGCCTTTCAGTTCCCTTTTGACAGCACTATGCAAGAAAATGTTGTAATCATGGCACGTCAATATGTTCGCAGTGTGATTTCCTCTGTGCAGAGGGTTGCCATGGCCATTTCACCGTCCGGTATAAACCCAGCTGTTGGTGCCAAACTTTCTCCTGGTTCTCCAGAAGCAGTTACACTAGCTCAATGGATCTGCCAGAGTTATAGGCAAGTCTACATATTTGTCTCGAATATCTTGAGCATTCTAGTTGATATCTCTTTTCTGAAAAAAGTCTAATGGATTTATCTTTCCCTTTAATCAGTTACTATTTGGGGACGGACTTACTGAGATCAGATTCTCTTGTTGGTGACTTGATGCTGAAACAACTGTGGCATCACCAGGACGCGATTTTATGCTGTTCATTGAAGGTATGGCTGTAATTCTATTTCATTGTATGGTGGCGGAGGTGGTTCTTATGTTTAGAAAGGAAGTTGGAAGGTTTGTAATTTTGGTAGTCCTTTATAACGCGAGATTAATGTGATTTTCTGTTTGGTATTGCAGTCGCAGCCGGTGTTTGTATTTGCAAATCAAGCTGGCCTTGACATGTTGGAAACAACTCTAGTAGCTTTACAAGACATCACATTGGATAAAATATTTGACGAGTCTGGTCGCAAGGCGTTGTGTGCTGATTTTGCCAAGTTAATGCAACAGGTGGTTTCCTCAACTTAACATGAATAATGCAATAGATGTTTTTAAATCTTTTTTCAAGAGCTTGTACTAATTATAAGTTGTGTATACTTTGATTAGGGGTTTGCTTATCTGCCAGCTGGGATCTGCATGTCGACAATGGGGCGGCATGTTTCGTACGAGCAAGCCATTGCATGGAAAGTGCTAACACCAGAAGATAACACTGTTCATTGCTTAGCTTTCTCTTTCATAAATTGGTCATTTGTATGA
Protein sequence

>MS.gene08723.t1

MAMAMAVAHHIESSSSGGSIDKHLDSGKYVRYTTEQVEALERVYAECPKPSSMRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLSAMNKLLMEENDRLQKQVSQLVCENGFMRQQLHTPSAANTDASCDSVVTTPQNSKRDATNPAGLLSIAEETLTEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRLSWFRECRNLEVFTMFPAGNGGTIELIYTQTYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGSGTGPNSTAAAQFVRAEMLPSGYLIRPCDGGGSIIHIVDHLNLEPWSVPEVLRPLYESPKVVAQKMTIAALRYIRQIAQESSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFSDDGWSILNCDGAEDVIIAVNSTKNLSSSSNPASSLTLLGGILCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYSAASLKAGTYAYPGMRPTRFTGNQIIMPLGNTIEHEEMLEVIRLEGHSLAQEDAFVSRDIHLLQICSGTDENAVGTCSELIFAPIDEMFPDDAPLVPSGFRIIPLDSKPGDKKDAVNTNRTLDLTSGLEVNPTTTHGSADSSSSQNTRSVLTIAFQFPFDSTMQENVVIMARQYVRSVISSVQRVAMAISPSGINPAVGAKLSPGSPEAVTLAQWICQSYSYYLGTDLLRSDSLVGDLMLKQLWHHQDAILCCSLKSQPVFVFANQAGLDMLETTLVALQDITLDKIFDESGRKALCADFAKLMQQGFAYLPAGICMSTMGRHVSYEQAIAWKVLTPEDNTVHCLAFSFINWSFV