Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054557.t1 | XP_013454562.1 | 97.1 | 487 | 14 | 0 | 1 | 487 | 1 | 487 | 7.40E-263 | 916 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054557.t1 | Q9FZ45 | 67.1 | 487 | 147 | 4 | 1 | 487 | 1 | 474 | 1.1e-171 | 604.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054557.t1 | A0A072UHJ0 | 97.1 | 487 | 14 | 0 | 1 | 487 | 1 | 487 | 5.3e-263 | 916.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053168 | MS.gene054557 | 0.967493 | 2.36E-127 | -1.69E-46 |
| MS.gene054557 | MS.gene057082 | 0.803234 | 3.84E-49 | -1.69E-46 |
| MS.gene054557 | MS.gene07723 | 0.802683 | 5.00E-49 | -1.69E-46 |
| MS.gene054557 | MS.gene08703 | 0.810876 | 9.27E-51 | -1.69E-46 |
| MS.gene054557 | MS.gene08723 | 0.810163 | 1.32E-50 | -1.69E-46 |
| MS.gene054557 | MS.gene32854 | 0.800471 | 1.42E-48 | -1.69E-46 |
| MS.gene054557 | MS.gene55101 | 0.808338 | 3.25E-50 | -1.69E-46 |
| MS.gene054557 | MS.gene56169 | 0.809834 | 1.56E-50 | -1.69E-46 |
| MS.gene054557 | MS.gene65436 | 0.996086 | 3.09E-223 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054557.t1 | MTR_4g007930 | 97.741 | 487 | 11 | 0 | 1 | 487 | 1 | 487 | 0.0 | 973 |
| MS.gene054557.t1 | MTR_4g007930 | 86.242 | 487 | 16 | 1 | 1 | 487 | 1 | 436 | 0.0 | 836 |
| MS.gene054557.t1 | MTR_4g005510 | 79.466 | 487 | 91 | 3 | 1 | 487 | 1 | 478 | 0.0 | 786 |
| MS.gene054557.t1 | MTR_2g025190 | 47.551 | 490 | 192 | 12 | 1 | 487 | 1 | 428 | 6.28e-141 | 412 |
| MS.gene054557.t1 | MTR_4g094505 | 80.734 | 109 | 21 | 0 | 351 | 459 | 35 | 143 | 4.48e-60 | 194 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene054557.t1 | AT1G16860 | 70.842 | 487 | 129 | 6 | 1 | 487 | 1 | 474 | 0.0 | 689 |
| MS.gene054557.t1 | AT1G78880 | 71.047 | 487 | 122 | 7 | 1 | 487 | 1 | 468 | 0.0 | 688 |
| MS.gene054557.t1 | AT4G22290 | 48.577 | 492 | 201 | 12 | 1 | 487 | 1 | 445 | 1.07e-141 | 414 |
Find 157 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATTTCCAGTCTGGTTTA+AGG | 0.132427 | 4.1:-87536270 | MS.gene054557:CDS |
| ATACGCATCTGGGGACTTTC+TGG | 0.148129 | 4.1:+87536556 | None:intergenic |
| CTTTCACTTGGAATACTTAT+TGG | 0.168647 | 4.1:-87537932 | MS.gene054557:CDS |
| TTGGGGAAGAAGAGCTATTA+TGG | 0.228841 | 4.1:-87537913 | MS.gene054557:CDS |
| TTTCACTTGGAATACTTATT+GGG | 0.234243 | 4.1:-87537931 | MS.gene054557:CDS |
| CACACATCGGCGACTTTCTT+GGG | 0.239546 | 4.1:-87536478 | MS.gene054557:CDS |
| CGTGATGGTGCACCTGTTAT+TGG | 0.255697 | 4.1:+87538527 | None:intergenic |
| TTTGTCATGGGTTTCATTGC+TGG | 0.264595 | 4.1:-87538032 | MS.gene054557:CDS |
| CTCTGGAGATAACTCTTCTT+TGG | 0.287381 | 4.1:+87536171 | None:intergenic |
| CCACACATCGGCGACTTTCT+TGG | 0.287717 | 4.1:-87536479 | MS.gene054557:CDS |
| TTCTTGGGGCCTTAGATTGC+TGG | 0.290905 | 4.1:-87536463 | MS.gene054557:CDS |
| AGCAATGGCCTATATGTATC+AGG | 0.299693 | 4.1:-87538692 | MS.gene054557:CDS |
| TTTATGTCTCCACCAGTATA+TGG | 0.303301 | 4.1:+87538617 | None:intergenic |
| ATTGTGGTTGTGATTCTCTT+TGG | 0.305200 | 4.1:-87537969 | MS.gene054557:CDS |
| GGCTCAAAATCTAGAAAATC+TGG | 0.307877 | 4.1:-87538551 | MS.gene054557:CDS |
| CCAACTGGACGTCAACATTC+TGG | 0.310059 | 4.1:-87538299 | MS.gene054557:CDS |
| GTTTAACGGGCCGGATGTTA+TGG | 0.313922 | 4.1:+87538229 | None:intergenic |
| CCATCACGAACAACATCTTT+TGG | 0.315052 | 4.1:-87538512 | MS.gene054557:CDS |
| AACCGGTATGACATCATTCT+TGG | 0.315437 | 4.1:+87535821 | None:intergenic |
| AAGCTCGGAGTCTGGATAAT+TGG | 0.320920 | 4.1:+87537881 | None:intergenic |
| GAGAACCGTGACAGCTTGAT+TGG | 0.337027 | 4.1:+87538124 | None:intergenic |
| ACCCTTTCCTTCGGCTGCTC+TGG | 0.338129 | 4.1:+87538665 | None:intergenic |
| TCACAAAAGAAATCTAATTC+CGG | 0.341069 | 4.1:-87538386 | MS.gene054557:CDS |
| GGAAGCACGGTGAGTGTAAT+GGG | 0.343936 | 4.1:-87535975 | MS.gene054557:CDS |
| CAGTGGCAACCTGTTGTAAT+TGG | 0.347392 | 4.1:+87535903 | None:intergenic |
| GGAGGAGCCGGTTCACATTC+CGG | 0.350207 | 4.1:-87538491 | MS.gene054557:CDS |
| GTGATGAATATTCCTTTAGA+AGG | 0.351769 | 4.1:-87538094 | MS.gene054557:CDS |
| TAGGAAAGTGTCCGGTCCTT+TGG | 0.356482 | 4.1:-87538192 | MS.gene054557:CDS |
| AGATTTCCAGTCTGGTTTAA+GGG | 0.356876 | 4.1:-87536269 | MS.gene054557:CDS |
| AACTCACTTCCAGCAATCTA+AGG | 0.364920 | 4.1:+87536454 | None:intergenic |
| TCCGGCCCGTTAAACTCTTC+TGG | 0.365621 | 4.1:-87538221 | MS.gene054557:CDS |
| GGACAATTTGTGAAAGTCTC+TGG | 0.369526 | 4.1:-87537843 | MS.gene054557:CDS |
| TACATCTCAGATTTCCAGTC+TGG | 0.374160 | 4.1:-87536277 | MS.gene054557:CDS |
| ACTTCAGGTTCCATGTCTAT+TGG | 0.376754 | 4.1:-87538428 | MS.gene054557:CDS |
| CGGGCTATGTATACAACTTC+AGG | 0.380080 | 4.1:-87538443 | MS.gene054557:CDS |
| TGTTGATGTATATACGCATC+TGG | 0.385504 | 4.1:+87536545 | None:intergenic |
| CACAAAAGAAATCTAATTCC+GGG | 0.398376 | 4.1:-87538385 | MS.gene054557:CDS |
| CTTTGGAAAATTCCTTCTAA+AGG | 0.400379 | 4.1:+87538082 | None:intergenic |
| AGACCTGTTGTCGGAAGAAC+AGG | 0.402780 | 4.1:+87538266 | None:intergenic |
| TGGGGAAGAAGAGCTATTAT+GGG | 0.403677 | 4.1:-87537912 | MS.gene054557:CDS |
| CCAGAGTTCCTTCGGTGGTT+GGG | 0.404523 | 4.1:-87536154 | MS.gene054557:CDS |
| AATAACCATAACATGGCCTT+TGG | 0.408099 | 4.1:+87538065 | None:intergenic |
| GGAGATAACTCTTCTTTGGT+TGG | 0.409039 | 4.1:+87536175 | None:intergenic |
| AGAGAATCACAACCACAATA+AGG | 0.409233 | 4.1:+87537973 | None:intergenic |
| CGCGTCATGCGGCTGGAAGA+AGG | 0.413812 | 4.1:-87536106 | MS.gene054557:CDS |
| TACTCAACATAATGTTAAAC+CGG | 0.414465 | 4.1:+87535804 | None:intergenic |
| ATGTCTATTGGTGGCGCGGC+CGG | 0.417223 | 4.1:-87538416 | MS.gene054557:CDS |
| AGAAAATCTGGACCAATAAC+AGG | 0.418603 | 4.1:-87538539 | MS.gene054557:CDS |
| GCAACGGCCATGCCATATAC+TGG | 0.418874 | 4.1:-87538629 | MS.gene054557:CDS |
| ATAGCCCGAGCAGCAGCATT+AGG | 0.424098 | 4.1:+87538458 | None:intergenic |
| TTTAACGGGCCGGATGTTAT+GGG | 0.428882 | 4.1:+87538230 | None:intergenic |
| GCAGTTCTAAGCTCGGAGTC+TGG | 0.438914 | 4.1:+87537873 | None:intergenic |
| ATCTTAAGACTATACCTTCA+AGG | 0.438994 | 4.1:+87535856 | None:intergenic |
| TGACGACCGCGTCATGCGGC+TGG | 0.439958 | 4.1:-87536113 | MS.gene054557:CDS |
| GCAGCAGCATTAGGATGAAT+TGG | 0.442526 | 4.1:+87538467 | None:intergenic |
| GAACCGAGTCATCGACATAA+GGG | 0.443736 | 4.1:+87536212 | None:intergenic |
| ATTGTCGGAACCCTTTCCTT+CGG | 0.445815 | 4.1:+87538656 | None:intergenic |
| AAGTCTTCTGGTCCTCAGTC+TGG | 0.446644 | 4.1:-87538332 | MS.gene054557:CDS |
| TCATCCTAATGCTGCTGCTC+GGG | 0.448028 | 4.1:-87538462 | MS.gene054557:CDS |
| CAACCTGTTGTAATTGGCTC+TGG | 0.449007 | 4.1:+87535909 | None:intergenic |
| CCCAACCACCGAAGGAACTC+TGG | 0.451038 | 4.1:+87536154 | None:intergenic |
| GCTCCTGTTCTTCCGACAAC+AGG | 0.451493 | 4.1:-87538269 | MS.gene054557:CDS |
| TCCAGAGTTCCTTCGGTGGT+TGG | 0.451936 | 4.1:-87536155 | MS.gene054557:CDS |
| CCAGTCTGGTTTAAGGGCAT+TGG | 0.452634 | 4.1:-87536263 | MS.gene054557:CDS |
| TCTGGTGGAGTAACTCCAAC+TGG | 0.452783 | 4.1:-87538314 | MS.gene054557:CDS |
| TTCATCCTAATGCTGCTGCT+CGG | 0.459175 | 4.1:-87538463 | MS.gene054557:CDS |
| GACAATTTGTGAAAGTCTCT+GGG | 0.466857 | 4.1:-87537842 | MS.gene054557:CDS |
| AGTTATCTCCAGAGTTCCTT+CGG | 0.477647 | 4.1:-87536162 | MS.gene054557:CDS |
| AAAGGACCGGACACTTTCCT+AGG | 0.477866 | 4.1:+87538194 | None:intergenic |
| ACAACAGGTCTCATTACATC+GGG | 0.478936 | 4.1:-87538254 | MS.gene054557:CDS |
| AAATTTAGGTATGTTAAAGA+AGG | 0.480328 | 4.1:-87535996 | MS.gene054557:intron |
| CCTGTTGTAATTGGCTCTGG+TGG | 0.480509 | 4.1:+87535912 | None:intergenic |
| AGGAAGCACGGTGAGTGTAA+TGG | 0.482841 | 4.1:-87535976 | MS.gene054557:CDS |
| GAGCACCAGAAGAGTTTAAC+GGG | 0.484627 | 4.1:+87538216 | None:intergenic |
| AATTGGTCCGGAATGTGAAC+CGG | 0.485882 | 4.1:+87538484 | None:intergenic |
| CTGGCCGCCCTGATACATAT+AGG | 0.492316 | 4.1:+87538684 | None:intergenic |
| ACTATACCTTCAAGGCTAGC+AGG | 0.493773 | 4.1:+87535864 | None:intergenic |
| AGAACCGAGTCATCGACATA+AGG | 0.496748 | 4.1:+87536211 | None:intergenic |
| TAGTTGCTGCGTCTTTCACT+TGG | 0.499653 | 4.1:-87537944 | MS.gene054557:CDS |
| ATGTTTGATATTCCTACTGA+TGG | 0.501815 | 4.1:-87538572 | MS.gene054557:CDS |
| TCCGGTCCTTTGGAAGCGAC+AGG | 0.503063 | 4.1:-87538182 | MS.gene054557:CDS |
| AGAACCGTGACAGCTTGATT+GGG | 0.504116 | 4.1:+87538125 | None:intergenic |
| CCACCAGAGCCAATTACAAC+AGG | 0.509786 | 4.1:-87535912 | MS.gene054557:CDS |
| ACATCGGGGCCCATAACATC+CGG | 0.514434 | 4.1:-87538239 | MS.gene054557:CDS |
| TAAACTCTTCTGGTGCTCCT+AGG | 0.515059 | 4.1:-87538211 | MS.gene054557:CDS |
| GGCCAGAGCAGCCGAAGGAA+AGG | 0.516639 | 4.1:-87538667 | MS.gene054557:CDS |
| CAATCCTACTCTCCTTATTG+TGG | 0.520480 | 4.1:-87537985 | MS.gene054557:CDS |
| CCAAGAAAGTCGCCGATGTG+TGG | 0.521299 | 4.1:+87536479 | None:intergenic |
| TCAGGTTCCATGTCTATTGG+TGG | 0.521553 | 4.1:-87538425 | MS.gene054557:CDS |
| GCTGTCACGGTTCTCAATCA+AGG | 0.524641 | 4.1:-87538116 | MS.gene054557:CDS |
| GGAGCACCAGAAGAGTTTAA+CGG | 0.526982 | 4.1:+87538215 | None:intergenic |
| GATGTAATGAGACCTGTTGT+CGG | 0.530788 | 4.1:+87538257 | None:intergenic |
| TTAAGGGCATTGGTCAAGAC+TGG | 0.533377 | 4.1:-87536253 | MS.gene054557:CDS |
| TCCGGGCCGTTGAGTAAGCA+TGG | 0.533729 | 4.1:-87538368 | MS.gene054557:CDS |
| AGCATTAGGATGAATTGGTC+CGG | 0.534541 | 4.1:+87538472 | None:intergenic |
| GCCAGAGCAGCCGAAGGAAA+GGG | 0.535600 | 4.1:-87538666 | MS.gene054557:CDS |
| GCATTGGTCAAGACTGGTCA+TGG | 0.535819 | 4.1:-87536247 | MS.gene054557:CDS |
| ATGGCCGTTGCAGTCATTGT+CGG | 0.539664 | 4.1:+87538641 | None:intergenic |
| ACCTGTCGCTTCCAAAGGAC+CGG | 0.542637 | 4.1:+87538181 | None:intergenic |
| GTTGTAATTGGCTCTGGTGG+AGG | 0.543129 | 4.1:+87535915 | None:intergenic |
| ATCGAACCTGTCGCTTCCAA+AGG | 0.546674 | 4.1:+87538176 | None:intergenic |
| ACCAGAAGAGTTTAACGGGC+CGG | 0.548740 | 4.1:+87538220 | None:intergenic |
| ACACATCGGCGACTTTCTTG+GGG | 0.550057 | 4.1:-87536477 | MS.gene054557:CDS |
| CAAGTGACGACCGCGTCATG+CGG | 0.550405 | 4.1:-87536117 | MS.gene054557:CDS |
| GTTGATGTATATACGCATCT+GGG | 0.554560 | 4.1:+87536546 | None:intergenic |
| CCAATGCCCTTAAACCAGAC+TGG | 0.554916 | 4.1:+87536263 | None:intergenic |
| CAATTACAACAGGTTGCCAC+TGG | 0.559535 | 4.1:-87535902 | MS.gene054557:CDS |
| TCTTCTGGTCCTCAGTCTGG+TGG | 0.564069 | 4.1:-87538329 | MS.gene054557:CDS |
| CAAGAAAGTCGCCGATGTGT+GGG | 0.564808 | 4.1:+87536480 | None:intergenic |
| GCGTCATGCGGCTGGAAGAA+GGG | 0.567626 | 4.1:-87536105 | MS.gene054557:intron |
| CCGGGCCGTTGAGTAAGCAT+GGG | 0.569197 | 4.1:-87538367 | MS.gene054557:CDS |
| TTCTCTCTCCCAACCACCGA+AGG | 0.571271 | 4.1:+87536146 | None:intergenic |
| CCCATGCTTACTCAACGGCC+CGG | 0.573033 | 4.1:+87538367 | None:intergenic |
| TTCACTTGGAATACTTATTG+GGG | 0.584812 | 4.1:-87537930 | MS.gene054557:CDS |
| CAGAATTAATAACCATAACA+TGG | 0.587882 | 4.1:+87538058 | None:intergenic |
| CCAGAATGTTGACGTCCAGT+TGG | 0.591032 | 4.1:+87538299 | None:intergenic |
| TGTTCCCAATCAAGCTGTCA+CGG | 0.592305 | 4.1:-87538129 | MS.gene054557:CDS |
| GGCCGCGCCACCAATAGACA+TGG | 0.592797 | 4.1:+87538418 | None:intergenic |
| CCAAAAGATGTTGTTCGTGA+TGG | 0.593399 | 4.1:+87538512 | None:intergenic |
| GGTGCTCCTAGGAAAGTGTC+CGG | 0.594458 | 4.1:-87538200 | MS.gene054557:CDS |
| CCATTGCTAAGCTGATGAGA+TGG | 0.595252 | 4.1:+87538707 | None:intergenic |
| GTCCAAGAATGATGTCATAC+CGG | 0.596211 | 4.1:-87535823 | MS.gene054557:CDS |
| GTTTATATGAGTATCGAGGA+TGG | 0.596932 | 4.1:-87536521 | MS.gene054557:CDS |
| ACAACCACAATAAGGAGAGT+AGG | 0.597391 | 4.1:+87537981 | None:intergenic |
| TTCCATGTCTATTGGTGGCG+CGG | 0.597736 | 4.1:-87538420 | MS.gene054557:CDS |
| GTCATGGGTTTCATTGCTGG+CGG | 0.598110 | 4.1:-87538029 | MS.gene054557:CDS |
| GTCTCCACCAGTATATGGCA+TGG | 0.603884 | 4.1:+87538622 | None:intergenic |
| AACCCCTTATGTCGATGACT+CGG | 0.606820 | 4.1:-87536215 | MS.gene054557:CDS |
| GACAACAGGTCTCATTACAT+CGG | 0.606983 | 4.1:-87538255 | MS.gene054557:CDS |
| TTTATATGAGTATCGAGGAT+GGG | 0.609039 | 4.1:-87536520 | MS.gene054557:CDS |
| CTTCTTCCAGCCGCATGACG+CGG | 0.611684 | 4.1:+87536107 | None:intergenic |
| ATACTGTAGGTCGTTACTTG+CGG | 0.613603 | 4.1:-87536603 | MS.gene054557:intron |
| CCATCTCATCAGCTTAGCAA+TGG | 0.621180 | 4.1:-87538707 | MS.gene054557:CDS |
| AGGGCGGCCAGAGCAGCCGA+AGG | 0.624884 | 4.1:-87538672 | MS.gene054557:CDS |
| GCAATGGCCTATATGTATCA+GGG | 0.626956 | 4.1:-87538691 | MS.gene054557:CDS |
| TATCTCCAGAGTTCCTTCGG+TGG | 0.629619 | 4.1:-87536159 | MS.gene054557:CDS |
| ACAGGTTCGATGAAGCTGCA+AGG | 0.638065 | 4.1:-87538164 | MS.gene054557:CDS |
| GAAGCACGGTGAGTGTAATG+GGG | 0.642631 | 4.1:-87535974 | MS.gene054557:CDS |
| GTCGGAAGAACAGGAGCTTG+AGG | 0.645472 | 4.1:+87538275 | None:intergenic |
| ACGGCCATGCCATATACTGG+TGG | 0.650794 | 4.1:-87538626 | MS.gene054557:CDS |
| GTATGTTAAAGAAGGAAGCA+CGG | 0.653132 | 4.1:-87535988 | MS.gene054557:CDS |
| AACCGAGTCATCGACATAAG+GGG | 0.653406 | 4.1:+87536213 | None:intergenic |
| AAGGAGAGTAGGATTGTGCA+CGG | 0.656895 | 4.1:+87537992 | None:intergenic |
| GGTTCCCCATGCTTACTCAA+CGG | 0.659541 | 4.1:+87538362 | None:intergenic |
| GGTTCCGACAATGACTGCAA+CGG | 0.666643 | 4.1:-87538645 | MS.gene054557:CDS |
| ACAAGTTTATATGAGTATCG+AGG | 0.671590 | 4.1:-87536525 | MS.gene054557:CDS |
| AGGTATAGTCTTAAGATGCG+AGG | 0.673800 | 4.1:-87535850 | MS.gene054557:CDS |
| TTCTGGAAAGATGACTCTAG+AGG | 0.681620 | 4.1:+87536573 | None:intergenic |
| AAGCTGCAAATCCCACACAT+CGG | 0.686120 | 4.1:-87536491 | MS.gene054557:CDS |
| TTGATGTATATACGCATCTG+GGG | 0.691928 | 4.1:+87536547 | None:intergenic |
| AAGCACGGTGAGTGTAATGG+GGG | 0.692901 | 4.1:-87535973 | MS.gene054557:CDS |
| CGGGCCGTTGAGTAAGCATG+GGG | 0.703124 | 4.1:-87538366 | MS.gene054557:CDS |
| GGAGTTACTCCACCAGACTG+AGG | 0.706915 | 4.1:+87538320 | None:intergenic |
| ACAATTTGTGAAAGTCTCTG+GGG | 0.715397 | 4.1:-87537841 | MS.gene054557:intron |
| TGTCATGTGACAGAGGCGTG+TGG | 0.723365 | 4.1:-87536308 | MS.gene054557:intron |
| CAACAGGTCTCATTACATCG+GGG | 0.785514 | 4.1:-87538253 | MS.gene054557:CDS |
| ATGGCCTATATGTATCAGGG+CGG | 0.795476 | 4.1:-87538688 | MS.gene054557:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTCTTTATGACAAAAT+CGG | + | chr4.1:87537742-87537761 | None:intergenic | 15.0% |
| !!! | TGTAACTTCTTTTTAAATTT+AGG | - | chr4.1:87538530-87538549 | MS.gene054557:CDS | 15.0% |
| !! | AAATTTAGGTATGTTAAAGA+AGG | - | chr4.1:87538544-87538563 | MS.gene054557:CDS | 20.0% |
| !! | GATAAACTATACTTTACAAT+TGG | - | chr4.1:87536932-87536951 | MS.gene054557:intron | 20.0% |
| !! | TAATTCTTTAATACTGTGTT+TGG | - | chr4.1:87537421-87537440 | MS.gene054557:intron | 20.0% |
| !! | TAGATTTAAATGGTCTAATA+GGG | - | chr4.1:87536973-87536992 | MS.gene054557:intron | 20.0% |
| !! | TATAGTTTGATAGAGATAAA+AGG | - | chr4.1:87536902-87536921 | MS.gene054557:intron | 20.0% |
| !! | TTAGATTTAAATGGTCTAAT+AGG | - | chr4.1:87536972-87536991 | MS.gene054557:intron | 20.0% |
| !!! | ATCTATTTTTACAGTTGTAT+CGG | - | chr4.1:87538467-87538486 | MS.gene054557:CDS | 20.0% |
| !!! | ATTAGATTTCTTTTGTGAAT+TGG | + | chr4.1:87536152-87536171 | None:intergenic | 20.0% |
| !!! | GAGTAGTTTTTAGATTTAAA+TGG | - | chr4.1:87536963-87536982 | MS.gene054557:intron | 20.0% |
| ! | ATAAAAAAGTCAGGAGAATT+GGG | - | chr4.1:87535941-87535960 | MS.gene054557:CDS | 25.0% |
| ! | CAATAAATGACAGTAATGTT+TGG | - | chr4.1:87537909-87537928 | MS.gene054557:CDS | 25.0% |
| ! | CAGAATTAATAACCATAACA+TGG | + | chr4.1:87536485-87536504 | None:intergenic | 25.0% |
| ! | TCACAAAAGAAATCTAATTC+CGG | - | chr4.1:87536154-87536173 | MS.gene054557:CDS | 25.0% |
| ! | TTACAAGAGATGATATAACT+TGG | - | chr4.1:87538507-87538526 | MS.gene054557:CDS | 25.0% |
| ! | TTTCACTTGGAATACTTATT+GGG | - | chr4.1:87536609-87536628 | MS.gene054557:intron | 25.0% |
| !! | AAAGAATTAAAAAAGTACGC+AGG | + | chr4.1:87537410-87537429 | None:intergenic | 25.0% |
| !!! | ACTCATGATTTATTTTGATC+AGG | - | chr4.1:87537788-87537807 | MS.gene054557:intron | 25.0% |
| !!! | ATTAATTCTGCTTTTTGTCA+TGG | - | chr4.1:87536495-87536514 | MS.gene054557:CDS | 25.0% |
| !!! | CCTTTTTCATTAAATTGGAT+CGG | + | chr4.1:87537055-87537074 | None:intergenic | 25.0% |
| !!! | CTCATGATTTATTTTGATCA+GGG | - | chr4.1:87537789-87537808 | MS.gene054557:intron | 25.0% |
| !!! | TTAATTCTGCTTTTTGTCAT+GGG | - | chr4.1:87536496-87536515 | MS.gene054557:CDS | 25.0% |
| !!! | TTCTAAGGCAAATATTACTT+GGG | + | chr4.1:87537819-87537838 | None:intergenic | 25.0% |
| AAACATAACTGGATGTTCTA+AGG | + | chr4.1:87537834-87537853 | None:intergenic | 30.0% | |
| ATAAATAGCCTTTACCAGTT+TGG | - | chr4.1:87536799-87536818 | MS.gene054557:intron | 30.0% | |
| ATATCATTACATATCGCATG+TGG | + | chr4.1:87537352-87537371 | None:intergenic | 30.0% | |
| ATCTTAAGACTATACCTTCA+AGG | + | chr4.1:87538687-87538706 | None:intergenic | 30.0% | |
| ATGTTTGATATTCCTACTGA+TGG | - | chr4.1:87535968-87535987 | MS.gene054557:CDS | 30.0% | |
| CACAAAAGAAATCTAATTCC+GGG | - | chr4.1:87536155-87536174 | MS.gene054557:CDS | 30.0% | |
| CATAAAAAAGTCAGGAGAAT+TGG | - | chr4.1:87535940-87535959 | MS.gene054557:CDS | 30.0% | |
| CCGATCCAATTTAATGAAAA+AGG | - | chr4.1:87537052-87537071 | MS.gene054557:intron | 30.0% | |
| CTTTCACTTGGAATACTTAT+TGG | - | chr4.1:87536608-87536627 | MS.gene054557:intron | 30.0% | |
| GTGATGAATATTCCTTTAGA+AGG | - | chr4.1:87536446-87536465 | MS.gene054557:intron | 30.0% | |
| TATCATTACATATCGCATGT+GGG | + | chr4.1:87537351-87537370 | None:intergenic | 30.0% | |
| TTCACTTGGAATACTTATTG+GGG | - | chr4.1:87536610-87536629 | MS.gene054557:intron | 30.0% | |
| TTCTTTATGACAAAATCGGA+TGG | + | chr4.1:87537738-87537757 | None:intergenic | 30.0% | |
| TTGTCAGTGTTGTCAAATAT+CGG | - | chr4.1:87537524-87537543 | MS.gene054557:intron | 30.0% | |
| ! | AATTAAAAAAGTACGCAGGT+GGG | + | chr4.1:87537406-87537425 | None:intergenic | 30.0% |
| ! | ACAAGTTTATATGAGTATCG+AGG | - | chr4.1:87538015-87538034 | MS.gene054557:CDS | 30.0% |
| ! | CTTTGGAAAATTCCTTCTAA+AGG | + | chr4.1:87536461-87536480 | None:intergenic | 30.0% |
| ! | TTTCTTTTGTGAATTGGAAC+CGG | + | chr4.1:87536146-87536165 | None:intergenic | 30.0% |
| !! | CTACTTTTATAAACTGTGAC+AGG | - | chr4.1:87537290-87537309 | MS.gene054557:intron | 30.0% |
| !! | CTTTAGAAGGAATTTTCCAA+AGG | - | chr4.1:87536459-87536478 | MS.gene054557:intron | 30.0% |
| !! | GATACTTAATGAGAGCATTT+AGG | - | chr4.1:87537229-87537248 | MS.gene054557:intron | 30.0% |
| !! | GTTCTAAGGCAAATATTACT+TGG | + | chr4.1:87537820-87537839 | None:intergenic | 30.0% |
| !! | TTTATATGAGTATCGAGGAT+GGG | - | chr4.1:87538020-87538039 | MS.gene054557:CDS | 30.0% |
| !!! | ATTTTTTGCAGTTCTAAGCT+CGG | + | chr4.1:87536677-87536696 | None:intergenic | 30.0% |
| AACAGCCAAGACCAAATTAA+AGG | + | chr4.1:87537175-87537194 | None:intergenic | 35.0% | |
| AATAACCATAACATGGCCTT+TGG | + | chr4.1:87536478-87536497 | None:intergenic | 35.0% | |
| ACAATTTGTGAAAGTCTCTG+GGG | - | chr4.1:87536699-87536718 | MS.gene054557:intron | 35.0% | |
| AGAAAATCTGGACCAATAAC+AGG | - | chr4.1:87536001-87536020 | MS.gene054557:intron | 35.0% | |
| AGAGAATCACAACCACAATA+AGG | + | chr4.1:87536570-87536589 | None:intergenic | 35.0% | |
| AGGATAGTTTGATAGAGGTA+AGG | - | chr4.1:87536863-87536882 | MS.gene054557:intron | 35.0% | |
| ATAACATTCAGTGTTGTCGA+TGG | + | chr4.1:87537679-87537698 | None:intergenic | 35.0% | |
| ATTGTGGTTGTGATTCTCTT+TGG | - | chr4.1:87536571-87536590 | MS.gene054557:CDS | 35.0% | |
| CAATTTAATGAAAAAGGCCC+TGG | - | chr4.1:87537058-87537077 | MS.gene054557:intron | 35.0% | |
| CTGTCACATGACATATATTC+CGG | + | chr4.1:87538225-87538244 | None:intergenic | 35.0% | |
| GAAAAATACATTTGAGCCAG+TGG | + | chr4.1:87538657-87538676 | None:intergenic | 35.0% | |
| GAACCGATTAAAAAGTCTTC+TGG | - | chr4.1:87536196-87536215 | MS.gene054557:CDS | 35.0% | |
| GAATATATGTCATGTGACAG+AGG | - | chr4.1:87538225-87538244 | MS.gene054557:CDS | 35.0% | |
| GACAATTTGTGAAAGTCTCT+GGG | - | chr4.1:87536698-87536717 | MS.gene054557:intron | 35.0% | |
| GACGAAAATATCATCGTGAA+CGG | - | chr4.1:87537145-87537164 | MS.gene054557:intron | 35.0% | |
| GAGCTTAGAACTGCAAAAAA+TGG | - | chr4.1:87536676-87536695 | MS.gene054557:intron | 35.0% | |
| GGCTCAAAATCTAGAAAATC+TGG | - | chr4.1:87535989-87536008 | MS.gene054557:CDS | 35.0% | |
| GTATCGGATATCAAGTCATA+TGG | - | chr4.1:87538483-87538502 | MS.gene054557:CDS | 35.0% | |
| GTATGTTAAAGAAGGAAGCA+CGG | - | chr4.1:87538552-87538571 | MS.gene054557:CDS | 35.0% | |
| GTTGATGTATATACGCATCT+GGG | + | chr4.1:87537997-87538016 | None:intergenic | 35.0% | |
| TATAAAAGTAGCAACTCCAG+AGG | + | chr4.1:87537281-87537300 | None:intergenic | 35.0% | |
| TCGTCATAATTTCCTATCAC+AGG | + | chr4.1:87537016-87537035 | None:intergenic | 35.0% | |
| TGAACGGAAAGCCTTTAATT+TGG | - | chr4.1:87537161-87537180 | MS.gene054557:intron | 35.0% | |
| TGTTGATGTATATACGCATC+TGG | + | chr4.1:87537998-87538017 | None:intergenic | 35.0% | |
| TTCTGTTTCACTTGATTGAC+CGG | - | chr4.1:87538203-87538222 | MS.gene054557:CDS | 35.0% | |
| TTGATGTATATACGCATCTG+GGG | + | chr4.1:87537996-87538015 | None:intergenic | 35.0% | |
| TTTATGTCTCCACCAGTATA+TGG | + | chr4.1:87535926-87535945 | None:intergenic | 35.0% | |
| ! | AAATATCGGTGGCAGTTTTT+AGG | - | chr4.1:87537538-87537557 | MS.gene054557:intron | 35.0% |
| ! | AGATTTCCAGTCTGGTTTAA+GGG | - | chr4.1:87538271-87538290 | MS.gene054557:CDS | 35.0% |
| ! | ATTTTCCAAAGGCCATGTTA+TGG | - | chr4.1:87536470-87536489 | MS.gene054557:CDS | 35.0% |
| ! | GAATTAAAAAAGTACGCAGG+TGG | + | chr4.1:87537407-87537426 | None:intergenic | 35.0% |
| ! | GGACCAGAAGACTTTTTAAT+CGG | + | chr4.1:87536202-87536221 | None:intergenic | 35.0% |
| !! | CAGGGCCTTTTTCATTAAAT+TGG | + | chr4.1:87537060-87537079 | None:intergenic | 35.0% |
| !! | GAAAGCCTTTAATTTGGTCT+TGG | - | chr4.1:87537167-87537186 | MS.gene054557:intron | 35.0% |
| !! | GTTTATATGAGTATCGAGGA+TGG | - | chr4.1:87538019-87538038 | MS.gene054557:CDS | 35.0% |
| AACCGGTATGACATCATTCT+TGG | + | chr4.1:87538722-87538741 | None:intergenic | 40.0% | |
| AACTCACTTCCAGCAATCTA+AGG | + | chr4.1:87538089-87538108 | None:intergenic | 40.0% | |
| ACAACAGGTCTCATTACATC+GGG | - | chr4.1:87536286-87536305 | MS.gene054557:CDS | 40.0% | |
| ACAACCACAATAAGGAGAGT+AGG | + | chr4.1:87536562-87536581 | None:intergenic | 40.0% | |
| AGCAATGGCCTATATGTATC+AGG | - | chr4.1:87535848-87535867 | MS.gene054557:CDS | 40.0% | |
| AGCATTAGGATGAATTGGTC+CGG | + | chr4.1:87536071-87536090 | None:intergenic | 40.0% | |
| AGCTTCTCGTCAAACATAAC+TGG | + | chr4.1:87537845-87537864 | None:intergenic | 40.0% | |
| AGTTATCTCCAGAGTTCCTT+CGG | - | chr4.1:87538378-87538397 | MS.gene054557:CDS | 40.0% | |
| ATACCCAATTTCGACCGATA+TGG | - | chr4.1:87537570-87537589 | MS.gene054557:intron | 40.0% | |
| ATACTGTAGGTCGTTACTTG+CGG | - | chr4.1:87537937-87537956 | MS.gene054557:CDS | 40.0% | |
| ATATCGGTCGAAATTGGGTA+TGG | + | chr4.1:87537571-87537590 | None:intergenic | 40.0% | |
| ATGTTTGGCTGTGATACTGT+AGG | - | chr4.1:87537924-87537943 | MS.gene054557:CDS | 40.0% | |
| CAATCCTACTCTCCTTATTG+TGG | - | chr4.1:87536555-87536574 | MS.gene054557:CDS | 40.0% | |
| CAGTTTGGAGAAGACACTTA+AGG | - | chr4.1:87536814-87536833 | MS.gene054557:intron | 40.0% | |
| CATTAGACATGACCTGTGAT+AGG | - | chr4.1:87537001-87537020 | MS.gene054557:intron | 40.0% | |
| CCAAAAGATGTTGTTCGTGA+TGG | + | chr4.1:87536031-87536050 | None:intergenic | 40.0% | |
| CTTAAGTGTCTTCTCCAAAC+TGG | + | chr4.1:87536816-87536835 | None:intergenic | 40.0% | |
| GACAACAGGTCTCATTACAT+CGG | - | chr4.1:87536285-87536304 | MS.gene054557:CDS | 40.0% | |
| GAGGAAGGATAGTTTGATAG+AGG | - | chr4.1:87536858-87536877 | MS.gene054557:intron | 40.0% | |
| GATGTAATGAGACCTGTTGT+CGG | + | chr4.1:87536286-87536305 | None:intergenic | 40.0% | |
| GCAATGGCCTATATGTATCA+GGG | - | chr4.1:87535849-87535868 | MS.gene054557:CDS | 40.0% | |
| GGACAATTTGTGAAAGTCTC+TGG | - | chr4.1:87536697-87536716 | MS.gene054557:intron | 40.0% | |
| GGAGATAACTCTTCTTTGGT+TGG | + | chr4.1:87538368-87538387 | None:intergenic | 40.0% | |
| GGTGGAGACATAAAAAAGTC+AGG | - | chr4.1:87535932-87535951 | MS.gene054557:CDS | 40.0% | |
| GTCCAAGAATGATGTCATAC+CGG | - | chr4.1:87538717-87538736 | MS.gene054557:CDS | 40.0% | |
| TACATCTCAGATTTCCAGTC+TGG | - | chr4.1:87538263-87538282 | MS.gene054557:CDS | 40.0% | |
| TCAGTGTTGTCAAATATCGG+TGG | - | chr4.1:87537527-87537546 | MS.gene054557:intron | 40.0% | |
| TCCACCATAATCCGATATGA+CGG | - | chr4.1:87537601-87537620 | MS.gene054557:intron | 40.0% | |
| TGGGGAAGAAGAGCTATTAT+GGG | - | chr4.1:87536628-87536647 | MS.gene054557:intron | 40.0% | |
| TGTCTTCTCCAAACTGGTAA+AGG | + | chr4.1:87536810-87536829 | None:intergenic | 40.0% | |
| TTGGGGAAGAAGAGCTATTA+TGG | - | chr4.1:87536627-87536646 | MS.gene054557:intron | 40.0% | |
| TTTAATGAAAAAGGCCCTGG+CGG | - | chr4.1:87537061-87537080 | MS.gene054557:intron | 40.0% | |
| TTTGTCATGGGTTTCATTGC+TGG | - | chr4.1:87536508-87536527 | MS.gene054557:CDS | 40.0% | |
| ! | ACACTTAAGGCATCAATGCT+AGG | - | chr4.1:87536827-87536846 | MS.gene054557:intron | 40.0% |
| ! | ACTTCAGGTTCCATGTCTAT+TGG | - | chr4.1:87536112-87536131 | MS.gene054557:CDS | 40.0% |
| ! | AGGTATAGTCTTAAGATGCG+AGG | - | chr4.1:87538690-87538709 | MS.gene054557:CDS | 40.0% |
| ! | CACTTAAGGCATCAATGCTA+GGG | - | chr4.1:87536828-87536847 | MS.gene054557:intron | 40.0% |
| ! | CAGATTTCCAGTCTGGTTTA+AGG | - | chr4.1:87538270-87538289 | MS.gene054557:CDS | 40.0% |
| ! | CCATCACGAACAACATCTTT+TGG | - | chr4.1:87536028-87536047 | MS.gene054557:intron | 40.0% |
| ! | CTAGATTTTGAGCCATCAGT+AGG | + | chr4.1:87535983-87536002 | None:intergenic | 40.0% |
| ! | CTCTGGAGATAACTCTTCTT+TGG | + | chr4.1:87538372-87538391 | None:intergenic | 40.0% |
| ! | TCACGAACAACATCTTTTGG+AGG | - | chr4.1:87536031-87536050 | MS.gene054557:intron | 40.0% |
| ! | TTCTGGAAAGATGACTCTAG+AGG | + | chr4.1:87537970-87537989 | None:intergenic | 40.0% |
| !!! | ATTGCTGGCGGTTTTATTCT+TGG | - | chr4.1:87536523-87536542 | MS.gene054557:CDS | 40.0% |
| !!! | ATTTTTCCTGCTAGCCTTGA+AGG | - | chr4.1:87538670-87538689 | MS.gene054557:CDS | 40.0% |
| AAACTATAATAGCCACCGCC+AGG | + | chr4.1:87537079-87537098 | None:intergenic | 45.0% | |
| AACCCCTTATGTCGATGACT+CGG | - | chr4.1:87538325-87538344 | MS.gene054557:CDS | 45.0% | |
| AACCGAGTCATCGACATAAG+GGG | + | chr4.1:87538330-87538349 | None:intergenic | 45.0% | |
| AACTATAATAGCCACCGCCA+GGG | + | chr4.1:87537078-87537097 | None:intergenic | 45.0% | |
| AAGCTCGGAGTCTGGATAAT+TGG | + | chr4.1:87536662-87536681 | None:intergenic | 45.0% | |
| AAGCTGCAAATCCCACACAT+CGG | - | chr4.1:87538049-87538068 | MS.gene054557:CDS | 45.0% | |
| AAGGAGAGTAGGATTGTGCA+CGG | + | chr4.1:87536551-87536570 | None:intergenic | 45.0% | |
| AATTGGTCCGGAATGTGAAC+CGG | + | chr4.1:87536059-87536078 | None:intergenic | 45.0% | |
| ACAGGTATCAGACACGTACT+TGG | - | chr4.1:87537308-87537327 | MS.gene054557:intron | 45.0% | |
| ACATTCAGTGTTGTCGATGG+CGG | + | chr4.1:87537676-87537695 | None:intergenic | 45.0% | |
| ACTATACCTTCAAGGCTAGC+AGG | + | chr4.1:87538679-87538698 | None:intergenic | 45.0% | |
| AGAACCGAGTCATCGACATA+AGG | + | chr4.1:87538332-87538351 | None:intergenic | 45.0% | |
| AGAACCGTGACAGCTTGATT+GGG | + | chr4.1:87536418-87536437 | None:intergenic | 45.0% | |
| AGAGGTTTAGTGCGCAAACA+AGG | + | chr4.1:87537263-87537282 | None:intergenic | 45.0% | |
| ATGGCCTATATGTATCAGGG+CGG | - | chr4.1:87535852-87535871 | MS.gene054557:CDS | 45.0% | |
| ATTGTCGGAACCCTTTCCTT+CGG | + | chr4.1:87535887-87535906 | None:intergenic | 45.0% | |
| CAACAGGTCTCATTACATCG+GGG | - | chr4.1:87536287-87536306 | MS.gene054557:CDS | 45.0% | |
| CAATTACAACAGGTTGCCAC+TGG | - | chr4.1:87538638-87538657 | MS.gene054557:CDS | 45.0% | |
| CAGTGGCAACCTGTTGTAAT+TGG | + | chr4.1:87538640-87538659 | None:intergenic | 45.0% | |
| CCATCTCATCAGCTTAGCAA+TGG | - | chr4.1:87535833-87535852 | MS.gene054557:CDS | 45.0% | |
| CCATTGCTAAGCTGATGAGA+TGG | + | chr4.1:87535836-87535855 | None:intergenic | 45.0% | |
| CGGGCTATGTATACAACTTC+AGG | - | chr4.1:87536097-87536116 | MS.gene054557:intron | 45.0% | |
| CTGCCATATCGGTCGAAATT+GGG | + | chr4.1:87537576-87537595 | None:intergenic | 45.0% | |
| GAACCGAGTCATCGACATAA+GGG | + | chr4.1:87538331-87538350 | None:intergenic | 45.0% | |
| GAGCACCAGAAGAGTTTAAC+GGG | + | chr4.1:87536327-87536346 | None:intergenic | 45.0% | |
| GCAGCAGCATTAGGATGAAT+TGG | + | chr4.1:87536076-87536095 | None:intergenic | 45.0% | |
| GGTGGAAAATCCTGCCATAT+CGG | + | chr4.1:87537587-87537606 | None:intergenic | 45.0% | |
| TAAACTCTTCTGGTGCTCCT+AGG | - | chr4.1:87536329-87536348 | MS.gene054557:intron | 45.0% | |
| TAGTTGCTGCGTCTTTCACT+TGG | - | chr4.1:87536596-87536615 | MS.gene054557:CDS | 45.0% | |
| TCAATGCTAGGGTAGACTAG+AGG | - | chr4.1:87536839-87536858 | MS.gene054557:intron | 45.0% | |
| TCAGGTTCCATGTCTATTGG+TGG | - | chr4.1:87536115-87536134 | MS.gene054557:CDS | 45.0% | |
| TGTTCCCAATCAAGCTGTCA+CGG | - | chr4.1:87536411-87536430 | MS.gene054557:intron | 45.0% | |
| TTCATCCTAATGCTGCTGCT+CGG | - | chr4.1:87536077-87536096 | MS.gene054557:intron | 45.0% | |
| TTGTTTGCGCACTAAACCTC+TGG | - | chr4.1:87537262-87537281 | MS.gene054557:intron | 45.0% | |
| ! | CAACCTGTTGTAATTGGCTC+TGG | + | chr4.1:87538634-87538653 | None:intergenic | 45.0% |
| ! | GGAGCACCAGAAGAGTTTAA+CGG | + | chr4.1:87536328-87536347 | None:intergenic | 45.0% |
| ! | TTTAACGGGCCGGATGTTAT+GGG | + | chr4.1:87536313-87536332 | None:intergenic | 45.0% |
| !! | ACAACATCTTTTGGAGGAGC+CGG | - | chr4.1:87536037-87536056 | MS.gene054557:intron | 45.0% |
| !! | TTAAGGGCATTGGTCAAGAC+TGG | - | chr4.1:87538287-87538306 | MS.gene054557:CDS | 45.0% |
| !! | AAATCTTAAAAATTAAAATT+TGG | - | chr4.1:87537380-87537399 | MS.gene054557:intron | 5.0% |
| AAAGGACCGGACACTTTCCT+AGG | + | chr4.1:87536349-87536368 | None:intergenic | 50.0% | |
| AAGCACGGTGAGTGTAATGG+GGG | - | chr4.1:87538567-87538586 | MS.gene054557:CDS | 50.0% | |
| AAGTCTTCTGGTCCTCAGTC+TGG | - | chr4.1:87536208-87536227 | MS.gene054557:CDS | 50.0% | |
| ACACATCGGCGACTTTCTTG+GGG | - | chr4.1:87538063-87538082 | MS.gene054557:CDS | 50.0% | |
| ACAGGTTCGATGAAGCTGCA+AGG | - | chr4.1:87536376-87536395 | MS.gene054557:intron | 50.0% | |
| AGACCTGTTGTCGGAAGAAC+AGG | + | chr4.1:87536277-87536296 | None:intergenic | 50.0% | |
| ATACGCATCTGGGGACTTTC+TGG | + | chr4.1:87537987-87538006 | None:intergenic | 50.0% | |
| ATGGCCGTTGCAGTCATTGT+CGG | + | chr4.1:87535902-87535921 | None:intergenic | 50.0% | |
| CAAGAAAGTCGCCGATGTGT+GGG | + | chr4.1:87538063-87538082 | None:intergenic | 50.0% | |
| CACACATCGGCGACTTTCTT+GGG | - | chr4.1:87538062-87538081 | MS.gene054557:CDS | 50.0% | |
| CCAACTGGACGTCAACATTC+TGG | - | chr4.1:87536241-87536260 | MS.gene054557:CDS | 50.0% | |
| CCAATGCCCTTAAACCAGAC+TGG | + | chr4.1:87538280-87538299 | None:intergenic | 50.0% | |
| CCAATTTCGACCGATATGGC+AGG | - | chr4.1:87537574-87537593 | MS.gene054557:intron | 50.0% | |
| CCACCAGAGCCAATTACAAC+AGG | - | chr4.1:87538628-87538647 | MS.gene054557:CDS | 50.0% | |
| CCAGAATGTTGACGTCCAGT+TGG | + | chr4.1:87536244-87536263 | None:intergenic | 50.0% | |
| CCTGCCATATCGGTCGAAAT+TGG | + | chr4.1:87537577-87537596 | None:intergenic | 50.0% | |
| CGTGCCGTCATATCGGATTA+TGG | + | chr4.1:87537608-87537627 | None:intergenic | 50.0% | |
| GAAGCACGGTGAGTGTAATG+GGG | - | chr4.1:87538566-87538585 | MS.gene054557:CDS | 50.0% | |
| GACGGCACGTCACAACAAAT+CGG | - | chr4.1:87537619-87537638 | MS.gene054557:intron | 50.0% | |
| GAGAACCGTGACAGCTTGAT+TGG | + | chr4.1:87536419-87536438 | None:intergenic | 50.0% | |
| GAGACAAAATTCCGCCACAC+CGG | + | chr4.1:87537645-87537664 | None:intergenic | 50.0% | |
| GCCGTCATATCGGATTATGG+TGG | + | chr4.1:87537605-87537624 | None:intergenic | 50.0% | |
| GCTGTCACGGTTCTCAATCA+AGG | - | chr4.1:87536424-87536443 | MS.gene054557:intron | 50.0% | |
| GGTTCCCCATGCTTACTCAA+CGG | + | chr4.1:87536181-87536200 | None:intergenic | 50.0% | |
| GGTTCCGACAATGACTGCAA+CGG | - | chr4.1:87535895-87535914 | MS.gene054557:CDS | 50.0% | |
| GTCATGGGTTTCATTGCTGG+CGG | - | chr4.1:87536511-87536530 | MS.gene054557:CDS | 50.0% | |
| GTCTCCACCAGTATATGGCA+TGG | + | chr4.1:87535921-87535940 | None:intergenic | 50.0% | |
| GTTGTGACGTGCCGTCATAT+CGG | + | chr4.1:87537615-87537634 | None:intergenic | 50.0% | |
| TATCTCCAGAGTTCCTTCGG+TGG | - | chr4.1:87538381-87538400 | MS.gene054557:CDS | 50.0% | |
| TCATCCTAATGCTGCTGCTC+GGG | - | chr4.1:87536078-87536097 | MS.gene054557:intron | 50.0% | |
| TCTGGTGGAGTAACTCCAAC+TGG | - | chr4.1:87536226-87536245 | MS.gene054557:CDS | 50.0% | |
| TGCTAGGGTAGACTAGAGGA+AGG | - | chr4.1:87536843-87536862 | MS.gene054557:intron | 50.0% | |
| TTCTTGGGGCCTTAGATTGC+TGG | - | chr4.1:87538077-87538096 | MS.gene054557:CDS | 50.0% | |
| ! | ACCAGAAGAGTTTAACGGGC+CGG | + | chr4.1:87536323-87536342 | None:intergenic | 50.0% |
| ! | AGGAAGCACGGTGAGTGTAA+TGG | - | chr4.1:87538564-87538583 | MS.gene054557:CDS | 50.0% |
| ! | ATCGAACCTGTCGCTTCCAA+AGG | + | chr4.1:87536367-87536386 | None:intergenic | 50.0% |
| ! | CCAGTCTGGTTTAAGGGCAT+TGG | - | chr4.1:87538277-87538296 | MS.gene054557:CDS | 50.0% |
| ! | CGTGATGGTGCACCTGTTAT+TGG | + | chr4.1:87536016-87536035 | None:intergenic | 50.0% |
| ! | GCATTGGTCAAGACTGGTCA+TGG | - | chr4.1:87538293-87538312 | MS.gene054557:CDS | 50.0% |
| ! | GGAAGCACGGTGAGTGTAAT+GGG | - | chr4.1:87538565-87538584 | MS.gene054557:CDS | 50.0% |
| ! | GTGTAATGGGGGTTGTTCAC+AGG | - | chr4.1:87538578-87538597 | MS.gene054557:CDS | 50.0% |
| ! | GTTTAACGGGCCGGATGTTA+TGG | + | chr4.1:87536314-87536333 | None:intergenic | 50.0% |
| !! | CCTGTTGTAATTGGCTCTGG+TGG | + | chr4.1:87538631-87538650 | None:intergenic | 50.0% |
| !! | GTTGTAATTGGCTCTGGTGG+AGG | + | chr4.1:87538628-87538647 | None:intergenic | 50.0% |
| !! | TAGGAAAGTGTCCGGTCCTT+TGG | - | chr4.1:87536348-87536367 | MS.gene054557:intron | 50.0% |
| !! | TTCCATGTCTATTGGTGGCG+CGG | - | chr4.1:87536120-87536139 | MS.gene054557:CDS | 50.0% |
| AATGAAAAAGGCCCTGGCGG+TGG | - | chr4.1:87537064-87537083 | MS.gene054557:intron | 55.0% | |
| ACATCGGGGCCCATAACATC+CGG | - | chr4.1:87536301-87536320 | MS.gene054557:intron | 55.0% | |
| ACGGCCATGCCATATACTGG+TGG | - | chr4.1:87535914-87535933 | MS.gene054557:CDS | 55.0% | |
| ATAGCCCGAGCAGCAGCATT+AGG | + | chr4.1:87536085-87536104 | None:intergenic | 55.0% | |
| CCAAGAAAGTCGCCGATGTG+TGG | + | chr4.1:87538064-87538083 | None:intergenic | 55.0% | |
| CCACACATCGGCGACTTTCT+TGG | - | chr4.1:87538061-87538080 | MS.gene054557:CDS | 55.0% | |
| CCAGAGTTCCTTCGGTGGTT+GGG | - | chr4.1:87538386-87538405 | MS.gene054557:CDS | 55.0% | |
| CTGGCCGCCCTGATACATAT+AGG | + | chr4.1:87535859-87535878 | None:intergenic | 55.0% | |
| GCAACGGCCATGCCATATAC+TGG | - | chr4.1:87535911-87535930 | MS.gene054557:CDS | 55.0% | |
| GCACGTCACAACAAATCGGC+CGG | - | chr4.1:87537623-87537642 | MS.gene054557:intron | 55.0% | |
| GCTCCTGTTCTTCCGACAAC+AGG | - | chr4.1:87536271-87536290 | MS.gene054557:CDS | 55.0% | |
| GGAGTTACTCCACCAGACTG+AGG | + | chr4.1:87536223-87536242 | None:intergenic | 55.0% | |
| GTCGGAAGAACAGGAGCTTG+AGG | + | chr4.1:87536268-87536287 | None:intergenic | 55.0% | |
| TCACAACAAATCGGCCGGTG+TGG | - | chr4.1:87537628-87537647 | MS.gene054557:intron | 55.0% | |
| TCCAGAGTTCCTTCGGTGGT+TGG | - | chr4.1:87538385-87538404 | MS.gene054557:CDS | 55.0% | |
| TCCGGCCCGTTAAACTCTTC+TGG | - | chr4.1:87536319-87536338 | MS.gene054557:intron | 55.0% | |
| TCTTCTGGTCCTCAGTCTGG+TGG | - | chr4.1:87536211-87536230 | MS.gene054557:CDS | 55.0% | |
| TTCTCTCTCCCAACCACCGA+AGG | + | chr4.1:87538397-87538416 | None:intergenic | 55.0% | |
| ! | ACCTGTCGCTTCCAAAGGAC+CGG | + | chr4.1:87536362-87536381 | None:intergenic | 55.0% |
| ! | TGTCATGTGACAGAGGCGTG+TGG | - | chr4.1:87538232-87538251 | MS.gene054557:CDS | 55.0% |
| !! | GCAGTTCTAAGCTCGGAGTC+TGG | + | chr4.1:87536670-87536689 | None:intergenic | 55.0% |
| !! | GGTGCTCCTAGGAAAGTGTC+CGG | - | chr4.1:87536340-87536359 | MS.gene054557:intron | 55.0% |
| !! | TCAGTGTTGTCGATGGCGGA+TGG | + | chr4.1:87537672-87537691 | None:intergenic | 55.0% |
| ACCCTTTCCTTCGGCTGCTC+TGG | + | chr4.1:87535878-87535897 | None:intergenic | 60.0% | |
| CAACAAATCGGCCGGTGTGG+CGG | - | chr4.1:87537631-87537650 | MS.gene054557:intron | 60.0% | |
| CAAGTGACGACCGCGTCATG+CGG | - | chr4.1:87538423-87538442 | MS.gene054557:CDS | 60.0% | |
| CCCAACCACCGAAGGAACTC+TGG | + | chr4.1:87538389-87538408 | None:intergenic | 60.0% | |
| CCCATGCTTACTCAACGGCC+CGG | + | chr4.1:87536176-87536195 | None:intergenic | 60.0% | |
| CCGGGCCGTTGAGTAAGCAT+GGG | - | chr4.1:87536173-87536192 | MS.gene054557:CDS | 60.0% | |
| CGGGCCGTTGAGTAAGCATG+GGG | - | chr4.1:87536174-87536193 | MS.gene054557:CDS | 60.0% | |
| CTTCTTCCAGCCGCATGACG+CGG | + | chr4.1:87538436-87538455 | None:intergenic | 60.0% | |
| GCCAGAGCAGCCGAAGGAAA+GGG | - | chr4.1:87535874-87535893 | MS.gene054557:CDS | 60.0% | |
| GCGTCATGCGGCTGGAAGAA+GGG | - | chr4.1:87538435-87538454 | MS.gene054557:CDS | 60.0% | |
| TCCGGGCCGTTGAGTAAGCA+TGG | - | chr4.1:87536172-87536191 | MS.gene054557:CDS | 60.0% | |
| ! | GGAGGAGCCGGTTCACATTC+CGG | - | chr4.1:87536049-87536068 | MS.gene054557:intron | 60.0% |
| ! | TCCGGTCCTTTGGAAGCGAC+AGG | - | chr4.1:87536358-87536377 | MS.gene054557:intron | 60.0% |
| !! | ATGTCTATTGGTGGCGCGGC+CGG | - | chr4.1:87536124-87536143 | MS.gene054557:CDS | 60.0% |
| CGCGTCATGCGGCTGGAAGA+AGG | - | chr4.1:87538434-87538453 | MS.gene054557:CDS | 65.0% | |
| GGCCAGAGCAGCCGAAGGAA+AGG | - | chr4.1:87535873-87535892 | MS.gene054557:CDS | 65.0% | |
| GGCCGCGCCACCAATAGACA+TGG | + | chr4.1:87536125-87536144 | None:intergenic | 65.0% | |
| TGACGACCGCGTCATGCGGC+TGG | - | chr4.1:87538427-87538446 | MS.gene054557:CDS | 70.0% | |
| AGGGCGGCCAGAGCAGCCGA+AGG | - | chr4.1:87535868-87535887 | MS.gene054557:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 87535818 | 87538744 | 87535818 | ID=MS.gene054557 |
| chr4.1 | mRNA | 87535818 | 87538744 | 87535818 | ID=MS.gene054557.t1;Parent=MS.gene054557 |
| chr4.1 | exon | 87537842 | 87538744 | 87537842 | ID=MS.gene054557.t1.exon1;Parent=MS.gene054557.t1 |
| chr4.1 | CDS | 87537842 | 87538744 | 87537842 | ID=cds.MS.gene054557.t1;Parent=MS.gene054557.t1 |
| chr4.1 | exon | 87536461 | 87536616 | 87536461 | ID=MS.gene054557.t1.exon2;Parent=MS.gene054557.t1 |
| chr4.1 | CDS | 87536461 | 87536616 | 87536461 | ID=cds.MS.gene054557.t1;Parent=MS.gene054557.t1 |
| chr4.1 | exon | 87536106 | 87536317 | 87536106 | ID=MS.gene054557.t1.exon3;Parent=MS.gene054557.t1 |
| chr4.1 | CDS | 87536106 | 87536317 | 87536106 | ID=cds.MS.gene054557.t1;Parent=MS.gene054557.t1 |
| chr4.1 | exon | 87535818 | 87536010 | 87535818 | ID=MS.gene054557.t1.exon4;Parent=MS.gene054557.t1 |
| chr4.1 | CDS | 87535818 | 87536010 | 87535818 | ID=cds.MS.gene054557.t1;Parent=MS.gene054557.t1 |
| Gene Sequence |
| Protein sequence |
