Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051648.t1 | XP_013465932.1 | 97.1 | 342 | 5 | 2 | 1 | 341 | 42 | 379 | 4.10E-175 | 624 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051648.t1 | O04135 | 70.6 | 360 | 84 | 8 | 1 | 341 | 41 | 397 | 5.5e-128 | 458.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051648.t1 | X2D315 | 97.1 | 342 | 5 | 2 | 1 | 341 | 42 | 379 | 2.9e-175 | 624.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene051648.t1 | TF | HB-KNOX |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049418 | MS.gene051648 | 0.816825 | 4.53E-52 | -1.69E-46 |
| MS.gene049660 | MS.gene051648 | 0.819469 | 1.14E-52 | -1.69E-46 |
| MS.gene050297 | MS.gene051648 | 0.800842 | 1.19E-48 | -1.69E-46 |
| MS.gene05054 | MS.gene051648 | 0.808812 | 2.58E-50 | -1.69E-46 |
| MS.gene051478 | MS.gene051648 | 0.803977 | 2.69E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene051660 | 0.819908 | 9.07E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene051664 | 0.815726 | 7.98E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene052150 | 0.941961 | 1.67E-101 | -1.69E-46 |
| MS.gene051648 | MS.gene052151 | 0.938608 | 5.08E-99 | -1.69E-46 |
| MS.gene051648 | MS.gene053536 | 0.873115 | 1.89E-67 | -1.69E-46 |
| MS.gene051648 | MS.gene053538 | 0.869425 | 3.13E-66 | -1.69E-46 |
| MS.gene051648 | MS.gene054142 | 0.805893 | 1.07E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene054999 | 0.819341 | 1.22E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene055537 | 0.824892 | 6.31E-54 | -1.69E-46 |
| MS.gene051648 | MS.gene055764 | 0.816064 | 6.70E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene056169 | 0.817299 | 3.54E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene057082 | 0.822269 | 2.59E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene05894 | 0.86652 | 2.68E-65 | -1.69E-46 |
| MS.gene051648 | MS.gene059424 | 0.8728 | 2.41E-67 | -1.69E-46 |
| MS.gene051648 | MS.gene059778 | 0.808079 | 3.69E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene060519 | 0.813738 | 2.20E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene061773 | 0.866782 | 2.22E-65 | -1.69E-46 |
| MS.gene051648 | MS.gene061774 | 0.853383 | 2.48E-61 | -1.69E-46 |
| MS.gene051648 | MS.gene061775 | 0.829678 | 4.50E-55 | -1.69E-46 |
| MS.gene051648 | MS.gene061805 | 0.810673 | 1.03E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene06258 | 0.820807 | 5.64E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene063689 | 0.816244 | 6.11E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene064161 | 0.803557 | 3.29E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene064162 | 0.805238 | 1.47E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene065643 | 0.843851 | 1.09E-58 | -1.69E-46 |
| MS.gene051648 | MS.gene065674 | 0.846711 | 1.83E-59 | -1.69E-46 |
| MS.gene051648 | MS.gene066010 | 0.880832 | 3.97E-70 | -1.69E-46 |
| MS.gene051648 | MS.gene066196 | 0.805817 | 1.11E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene067301 | 0.809317 | 2.01E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene06793 | 0.823353 | 1.45E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene069556 | 0.805928 | 1.05E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene069852 | 0.84311 | 1.71E-58 | -1.69E-46 |
| MS.gene051648 | MS.gene070885 | 0.834934 | 2.25E-56 | -1.69E-46 |
| MS.gene051648 | MS.gene071182 | 0.817656 | 2.94E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene07138 | 0.809938 | 1.48E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene071428 | 0.81308 | 3.07E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene072081 | 0.821708 | 3.50E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene073262 | 0.824161 | 9.38E-54 | -1.69E-46 |
| MS.gene051648 | MS.gene073326 | 0.810418 | 1.16E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene073606 | 0.806971 | 6.35E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene07374 | 0.819413 | 1.18E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene074172 | 0.809672 | 1.69E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene074317 | 0.831685 | 1.45E-55 | -1.69E-46 |
| MS.gene051648 | MS.gene07618 | 0.801329 | 9.48E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene07620 | 0.805004 | 1.65E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene07622 | 0.805621 | 1.22E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene07723 | 0.845873 | 3.10E-59 | -1.69E-46 |
| MS.gene051648 | MS.gene08703 | 0.802189 | 6.31E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene08723 | 0.808959 | 2.40E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene08815 | 0.800279 | 1.55E-48 | -1.69E-46 |
| MS.gene051648 | MS.gene09275 | 0.831359 | 1.75E-55 | -1.69E-46 |
| MS.gene051648 | MS.gene09575 | 0.800332 | 1.51E-48 | -1.69E-46 |
| MS.gene051648 | MS.gene09801 | 0.800431 | 1.45E-48 | -1.69E-46 |
| MS.gene051648 | MS.gene09934 | 0.863222 | 2.90E-64 | -1.69E-46 |
| MS.gene051648 | MS.gene20920 | 0.815353 | 9.66E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene21014 | 0.825541 | 4.43E-54 | -1.69E-46 |
| MS.gene051648 | MS.gene21026 | 0.812545 | 4.02E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene21029 | 0.809225 | 2.10E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene21144 | 0.805427 | 1.34E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene21256 | 0.825786 | 3.88E-54 | -1.69E-46 |
| MS.gene051648 | MS.gene22470 | 0.823336 | 1.46E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene22553 | 0.855411 | 6.42E-62 | -1.69E-46 |
| MS.gene051648 | MS.gene23003 | 0.802282 | 6.04E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene23880 | 0.830952 | 2.20E-55 | -1.69E-46 |
| MS.gene051648 | MS.gene23980 | 0.806598 | 7.61E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene24224 | 0.811679 | 6.21E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene24507 | 0.803548 | 3.31E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene24527 | 0.987796 | 1.44E-171 | -1.69E-46 |
| MS.gene051648 | MS.gene24528 | 0.845778 | 3.28E-59 | -1.69E-46 |
| MS.gene051648 | MS.gene24699 | 0.810701 | 1.01E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene24982 | 0.801567 | 8.47E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene25945 | 0.815886 | 7.35E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene26380 | 0.806648 | 7.43E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene26381 | 0.813694 | 2.25E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene26387 | 0.840297 | 9.47E-58 | -1.69E-46 |
| MS.gene051648 | MS.gene26464 | 0.8642 | 1.44E-64 | -1.69E-46 |
| MS.gene051648 | MS.gene26465 | 0.870441 | 1.46E-66 | -1.69E-46 |
| MS.gene051648 | MS.gene26665 | 0.801584 | 8.40E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene26801 | 0.803391 | 3.57E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene26802 | 0.817187 | 3.75E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene26850 | 0.807702 | 4.44E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene26855 | 0.849582 | 2.95E-60 | -1.69E-46 |
| MS.gene051648 | MS.gene27011 | 0.801349 | 9.39E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene27274 | 0.835033 | 2.12E-56 | -1.69E-46 |
| MS.gene051648 | MS.gene27546 | 0.807167 | 5.77E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene27646 | -0.836636 | 8.33E-57 | -1.69E-46 |
| MS.gene051648 | MS.gene27824 | 0.824801 | 6.63E-54 | -1.69E-46 |
| MS.gene051648 | MS.gene27943 | 0.804001 | 2.66E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene28050 | 0.807491 | 4.93E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene31336 | 0.816508 | 5.33E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene31350 | 0.825071 | 5.72E-54 | -1.69E-46 |
| MS.gene051648 | MS.gene32024 | 0.825298 | 5.06E-54 | -1.69E-46 |
| MS.gene051648 | MS.gene32539 | 0.804187 | 2.44E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene32703 | 0.804199 | 2.42E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene32854 | 0.881282 | 2.73E-70 | -1.69E-46 |
| MS.gene051648 | MS.gene32920 | 0.831724 | 1.42E-55 | -1.69E-46 |
| MS.gene051648 | MS.gene33123 | 0.823384 | 1.43E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene35441 | 0.835886 | 1.29E-56 | -1.69E-46 |
| MS.gene051648 | MS.gene36334 | 0.816963 | 4.22E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene36880 | 0.851337 | 9.48E-61 | -1.69E-46 |
| MS.gene051648 | MS.gene37460 | 0.87169 | 5.64E-67 | -1.69E-46 |
| MS.gene051648 | MS.gene38101 | 0.827962 | 1.17E-54 | -1.69E-46 |
| MS.gene051648 | MS.gene38167 | 0.818594 | 1.81E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene38688 | 0.839091 | 1.95E-57 | -1.69E-46 |
| MS.gene051648 | MS.gene38829 | 0.815998 | 6.93E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene39052 | 0.839892 | 1.21E-57 | -1.69E-46 |
| MS.gene051648 | MS.gene39297 | 0.82619 | 3.11E-54 | -1.69E-46 |
| MS.gene051648 | MS.gene39523 | 0.819604 | 1.06E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene40782 | 0.809441 | 1.89E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene40787 | 0.831666 | 1.47E-55 | -1.69E-46 |
| MS.gene051648 | MS.gene41164 | 0.81388 | 2.05E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene41651 | 0.839895 | 1.21E-57 | -1.69E-46 |
| MS.gene051648 | MS.gene42534 | 0.804113 | 2.52E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene42655 | 0.802449 | 5.58E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene42665 | 0.81435 | 1.61E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene43171 | 0.836584 | 8.59E-57 | -1.69E-46 |
| MS.gene051648 | MS.gene43896 | 0.828015 | 1.14E-54 | -1.69E-46 |
| MS.gene051648 | MS.gene44340 | 0.830202 | 3.35E-55 | -1.69E-46 |
| MS.gene051648 | MS.gene44341 | 0.831068 | 2.06E-55 | -1.69E-46 |
| MS.gene051648 | MS.gene44437 | 0.814045 | 1.88E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene45937 | 0.859894 | 3.02E-63 | -1.69E-46 |
| MS.gene051648 | MS.gene47586 | 0.803846 | 2.87E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene49313 | 0.812188 | 4.81E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene49754 | 0.8171 | 3.93E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene49973 | 0.833695 | 4.60E-56 | -1.69E-46 |
| MS.gene051648 | MS.gene50080 | 0.813653 | 2.30E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene51365 | 0.856448 | 3.20E-62 | -1.69E-46 |
| MS.gene051648 | MS.gene51589 | 0.823868 | 1.10E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene52975 | 0.81044 | 1.15E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene52996 | 0.867803 | 1.05E-65 | -1.69E-46 |
| MS.gene051648 | MS.gene53451 | 0.812549 | 4.01E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene54698 | 0.814308 | 1.65E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene54825 | 0.826282 | 2.95E-54 | -1.69E-46 |
| MS.gene051648 | MS.gene55101 | 0.859042 | 5.44E-63 | -1.69E-46 |
| MS.gene051648 | MS.gene55425 | 0.802629 | 5.12E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene55719 | 0.805845 | 1.10E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene56169 | 0.827558 | 1.46E-54 | -1.69E-46 |
| MS.gene051648 | MS.gene56419 | 0.804871 | 1.75E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene57117 | 0.815266 | 1.01E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene57289 | 0.81901 | 1.45E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene57320 | 0.804192 | 2.43E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene57428 | 0.800768 | 1.23E-48 | -1.69E-46 |
| MS.gene051648 | MS.gene57501 | 0.80883 | 2.55E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene57665 | 0.842018 | 3.34E-58 | -1.69E-46 |
| MS.gene051648 | MS.gene57666 | 0.808068 | 3.71E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene57684 | 0.807111 | 5.93E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene57873 | 0.807488 | 4.93E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene58096 | 0.802532 | 5.37E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene58249 | 0.822767 | 1.99E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene58836 | 0.823651 | 1.23E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene58950 | 0.815283 | 1.00E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene59847 | 0.853274 | 2.66E-61 | -1.69E-46 |
| MS.gene051648 | MS.gene59849 | 0.826682 | 2.37E-54 | -1.69E-46 |
| MS.gene051648 | MS.gene59944 | 0.800633 | 1.32E-48 | -1.69E-46 |
| MS.gene051648 | MS.gene60687 | -0.822847 | 1.90E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene61947 | 0.805165 | 1.52E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene63853 | 0.813779 | 2.15E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene64442 | 0.866517 | 2.69E-65 | -1.69E-46 |
| MS.gene051648 | MS.gene64763 | 0.802968 | 4.36E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene65139 | 0.833233 | 6.00E-56 | -1.69E-46 |
| MS.gene051648 | MS.gene65451 | 0.837386 | 5.36E-57 | -1.69E-46 |
| MS.gene051648 | MS.gene65734 | 0.82445 | 8.02E-54 | -1.69E-46 |
| MS.gene051648 | MS.gene66156 | 0.843702 | 1.19E-58 | -1.69E-46 |
| MS.gene051648 | MS.gene66159 | 0.821367 | 4.19E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene66496 | 0.810179 | 1.31E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene67222 | 0.804983 | 1.66E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene68280 | 0.80729 | 5.43E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene68440 | 0.818507 | 1.89E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene69768 | 0.800825 | 1.20E-48 | -1.69E-46 |
| MS.gene051648 | MS.gene70129 | 0.81214 | 4.92E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene70240 | 0.807548 | 4.79E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene70898 | 0.813075 | 3.08E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene71419 | 0.818408 | 1.99E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene71698 | 0.853625 | 2.11E-61 | -1.69E-46 |
| MS.gene051648 | MS.gene72367 | 0.804682 | 1.92E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene72487 | 0.886341 | 3.72E-72 | -1.69E-46 |
| MS.gene051648 | MS.gene72543 | 0.81383 | 2.10E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene73577 | 0.820028 | 8.52E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene74355 | 0.803321 | 3.69E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene75387 | 0.813917 | 2.01E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene75911 | 0.81087 | 9.29E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene76518 | 0.840843 | 6.81E-58 | -1.69E-46 |
| MS.gene051648 | MS.gene76601 | 0.823567 | 1.29E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene77197 | 0.813274 | 2.78E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene77669 | 0.809793 | 1.59E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene77734 | 0.882283 | 1.19E-70 | -1.69E-46 |
| MS.gene051648 | MS.gene78065 | 0.86348 | 2.42E-64 | -1.69E-46 |
| MS.gene051648 | MS.gene79784 | 0.830579 | 2.71E-55 | -1.69E-46 |
| MS.gene051648 | MS.gene79951 | 0.845968 | 2.92E-59 | -1.69E-46 |
| MS.gene051648 | MS.gene80180 | 0.814628 | 1.40E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene80183 | 0.820691 | 6.00E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene80199 | 0.800992 | 1.11E-48 | -1.69E-46 |
| MS.gene051648 | MS.gene80724 | 0.836293 | 1.02E-56 | -1.69E-46 |
| MS.gene051648 | MS.gene82094 | 0.808128 | 3.61E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene82993 | 0.83126 | 1.85E-55 | -1.69E-46 |
| MS.gene051648 | MS.gene83466 | 0.828173 | 1.04E-54 | -1.69E-46 |
| MS.gene051648 | MS.gene84006 | 0.804447 | 2.15E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene84298 | 0.834301 | 3.24E-56 | -1.69E-46 |
| MS.gene051648 | MS.gene84420 | 0.813761 | 2.17E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene84730 | 0.840559 | 8.08E-58 | -1.69E-46 |
| MS.gene051648 | MS.gene84863 | 0.804725 | 1.88E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene85066 | 0.828295 | 9.73E-55 | -1.69E-46 |
| MS.gene051648 | MS.gene85133 | 0.840587 | 7.95E-58 | -1.69E-46 |
| MS.gene051648 | MS.gene86393 | 0.804543 | 2.05E-49 | -1.69E-46 |
| MS.gene051648 | MS.gene89026 | 0.80008 | 1.70E-48 | -1.69E-46 |
| MS.gene051648 | MS.gene89081 | 0.80045 | 1.43E-48 | -1.69E-46 |
| MS.gene051648 | MS.gene89565 | 0.817012 | 4.11E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene90172 | 0.81613 | 6.48E-52 | -1.69E-46 |
| MS.gene051648 | MS.gene90591 | 0.826745 | 2.29E-54 | -1.69E-46 |
| MS.gene051648 | MS.gene91400 | 0.807817 | 4.20E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene91969 | 0.806892 | 6.60E-50 | -1.69E-46 |
| MS.gene051648 | MS.gene92541 | 0.822983 | 1.77E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene92988 | 0.860507 | 1.97E-63 | -1.69E-46 |
| MS.gene051648 | MS.gene96315 | 0.823922 | 1.07E-53 | -1.69E-46 |
| MS.gene051648 | MS.gene98660 | 0.812149 | 4.90E-51 | -1.69E-46 |
| MS.gene051648 | MS.gene99093 | 0.800244 | 1.58E-48 | -1.69E-46 |
| MS.gene051648 | MS.gene99878 | 0.833426 | 5.37E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051648.t1 | MTR_1g017080 | 97.076 | 342 | 5 | 2 | 1 | 341 | 42 | 379 | 0.0 | 687 |
| MS.gene051648.t1 | MTR_2g024390 | 58.730 | 252 | 90 | 3 | 81 | 328 | 117 | 358 | 2.35e-89 | 273 |
| MS.gene051648.t1 | MTR_5g033720 | 48.377 | 308 | 146 | 4 | 17 | 318 | 8 | 308 | 3.67e-86 | 262 |
| MS.gene051648.t1 | MTR_5g085860 | 55.187 | 241 | 94 | 3 | 81 | 317 | 46 | 276 | 1.96e-71 | 224 |
| MS.gene051648.t1 | MTR_1g084060 | 48.413 | 252 | 117 | 4 | 81 | 324 | 19 | 265 | 2.62e-70 | 220 |
| MS.gene051648.t1 | MTR_1g084060 | 48.413 | 252 | 117 | 4 | 81 | 324 | 19 | 265 | 4.46e-70 | 221 |
| MS.gene051648.t1 | MTR_2g461240 | 33.463 | 257 | 149 | 5 | 70 | 304 | 83 | 339 | 1.20e-37 | 138 |
| MS.gene051648.t1 | MTR_1g012960 | 32.342 | 269 | 151 | 6 | 67 | 304 | 152 | 420 | 3.09e-35 | 133 |
| MS.gene051648.t1 | MTR_5g011070 | 31.418 | 261 | 139 | 5 | 77 | 304 | 23 | 276 | 4.76e-34 | 127 |
| MS.gene051648.t1 | MTR_3g106400 | 31.724 | 290 | 153 | 9 | 58 | 304 | 68 | 355 | 2.31e-33 | 127 |
| MS.gene051648.t1 | MTR_3g106400 | 31.724 | 290 | 153 | 9 | 58 | 304 | 68 | 355 | 2.46e-33 | 127 |
| MS.gene051648.t1 | MTR_4g116545 | 32.800 | 250 | 146 | 5 | 77 | 304 | 66 | 315 | 2.52e-33 | 126 |
| MS.gene051648.t1 | MTR_4g116545 | 32.800 | 250 | 146 | 5 | 77 | 304 | 66 | 315 | 3.40e-33 | 125 |
| MS.gene051648.t1 | MTR_3g106400 | 31.724 | 290 | 153 | 9 | 58 | 304 | 68 | 355 | 4.87e-33 | 127 |
| MS.gene051648.t1 | MTR_7g065050 | 39.726 | 73 | 42 | 1 | 234 | 306 | 296 | 366 | 1.49e-11 | 65.9 |
| MS.gene051648.t1 | MTR_4g019450 | 43.243 | 74 | 39 | 2 | 233 | 306 | 351 | 421 | 1.96e-11 | 65.5 |
| MS.gene051648.t1 | MTR_4g051532 | 50.909 | 55 | 27 | 0 | 252 | 306 | 409 | 463 | 5.41e-11 | 64.3 |
| MS.gene051648.t1 | MTR_3g112300 | 37.000 | 100 | 55 | 4 | 207 | 306 | 315 | 406 | 8.01e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051648.t1 | AT4G08150 | 71.006 | 338 | 74 | 8 | 12 | 341 | 77 | 398 | 2.47e-155 | 441 |
| MS.gene051648.t1 | AT1G62360 | 57.037 | 270 | 105 | 3 | 57 | 320 | 95 | 359 | 4.06e-90 | 275 |
| MS.gene051648.t1 | AT1G23380 | 56.904 | 239 | 96 | 3 | 80 | 316 | 84 | 317 | 3.66e-85 | 260 |
| MS.gene051648.t1 | AT1G23380 | 56.432 | 241 | 96 | 4 | 80 | 316 | 84 | 319 | 3.90e-83 | 255 |
| MS.gene051648.t1 | AT1G70510 | 53.165 | 237 | 108 | 1 | 80 | 316 | 68 | 301 | 5.43e-79 | 244 |
| MS.gene051648.t1 | AT1G70510 | 52.282 | 241 | 108 | 2 | 80 | 316 | 68 | 305 | 9.94e-77 | 238 |
| MS.gene051648.t1 | AT1G62990 | 30.996 | 271 | 146 | 7 | 66 | 304 | 14 | 275 | 8.29e-36 | 132 |
| MS.gene051648.t1 | AT5G25220 | 33.700 | 273 | 143 | 8 | 67 | 304 | 134 | 403 | 1.75e-35 | 134 |
| MS.gene051648.t1 | AT5G25220 | 33.700 | 273 | 143 | 8 | 67 | 304 | 134 | 403 | 2.44e-35 | 133 |
| MS.gene051648.t1 | AT5G11060 | 33.603 | 247 | 137 | 7 | 82 | 304 | 124 | 367 | 8.37e-34 | 129 |
| MS.gene051648.t1 | AT4G32040 | 30.242 | 248 | 144 | 4 | 82 | 304 | 119 | 362 | 5.11e-33 | 126 |
| MS.gene051648.t1 | AT4G32040 | 30.242 | 248 | 144 | 4 | 82 | 304 | 119 | 362 | 6.43e-33 | 126 |
| MS.gene051648.t1 | AT1G19700 | 50.909 | 55 | 27 | 0 | 252 | 306 | 358 | 412 | 3.69e-11 | 64.7 |
| MS.gene051648.t1 | AT1G19700 | 50.909 | 55 | 27 | 0 | 252 | 306 | 358 | 412 | 3.69e-11 | 64.7 |
| MS.gene051648.t1 | AT1G19700 | 50.909 | 55 | 27 | 0 | 252 | 306 | 358 | 412 | 3.69e-11 | 64.7 |
| MS.gene051648.t1 | AT1G19700 | 50.909 | 55 | 27 | 0 | 252 | 306 | 358 | 412 | 3.69e-11 | 64.7 |
| MS.gene051648.t1 | AT1G19700 | 50.909 | 55 | 27 | 0 | 252 | 306 | 358 | 412 | 3.69e-11 | 64.7 |
| MS.gene051648.t1 | AT1G75430 | 49.091 | 55 | 28 | 0 | 252 | 306 | 209 | 263 | 4.17e-11 | 63.5 |
| MS.gene051648.t1 | AT2G27220 | 49.091 | 55 | 28 | 0 | 252 | 306 | 235 | 289 | 8.03e-11 | 63.2 |
| MS.gene051648.t1 | AT2G27220 | 49.091 | 55 | 28 | 0 | 252 | 306 | 235 | 289 | 8.03e-11 | 63.2 |
Find 76 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAGAAGACATGCAGTTTA+TGG | 0.215872 | 1.3:-5456315 | MS.gene051648:CDS |
| GCTGATGGTCCCTACCGTTT+AGG | 0.271349 | 1.3:-5456236 | MS.gene051648:CDS |
| ACCAGTTATTTATTTGCTTC+TGG | 0.277102 | 1.3:+5456369 | None:intergenic |
| TTGAGGATGAGCAATGATTT+TGG | 0.278077 | 1.3:+5466638 | None:intergenic |
| ACAGAGTGCAGCTCTTTATA+TGG | 0.322707 | 1.3:-5456273 | MS.gene051648:CDS |
| ACCATGAATTGGTCTAGTTC+TGG | 0.338115 | 1.3:+5466200 | None:intergenic |
| CTGATGGTCCCTACCGTTTA+GGG | 0.343258 | 1.3:-5456235 | MS.gene051648:CDS |
| CTAGACAAAAGCTACTTAAT+TGG | 0.349186 | 1.3:-5457059 | MS.gene051648:CDS |
| ACCAAACGAGCCACCACTTC+CGG | 0.349272 | 1.3:+5466290 | None:intergenic |
| ACCGGAAGTGGTGGCTCGTT+TGG | 0.365361 | 1.3:-5466291 | MS.gene051648:CDS |
| TGAAGATGAAAGTTGTTCAT+TGG | 0.383854 | 1.3:+5466888 | None:intergenic |
| ACCAGAAGCAAATAAATAAC+TGG | 0.406580 | 1.3:-5456370 | MS.gene051648:CDS |
| GAAAGGAAAATTACCTAAAG+AGG | 0.441916 | 1.3:-5457082 | MS.gene051648:CDS |
| AAATCCATAGCCTCTTGTAT+AGG | 0.443002 | 1.3:+5465931 | None:intergenic |
| ATGATGATTATGCATAATAT+TGG | 0.443654 | 1.3:+5466719 | None:intergenic |
| GTAGCATTGGCTGAATCAAC+AGG | 0.445109 | 1.3:-5456398 | MS.gene051648:CDS |
| TTACAAATGGCCTTATCCTT+CGG | 0.445371 | 1.3:-5457025 | MS.gene051648:intron |
| ATATTTGTTCTCATTAAAGC+TGG | 0.445786 | 1.3:+5466753 | None:intergenic |
| TGTTGATGTTGTACTTGATC+AGG | 0.447416 | 1.3:+5466837 | None:intergenic |
| ATCATAATCATGGCCCTAAA+CGG | 0.455352 | 1.3:+5456222 | None:intergenic |
| ATTGGCTGAATCAACAGGTT+TGG | 0.461797 | 1.3:-5456393 | MS.gene051648:CDS |
| TCAGGTTGAAAACAATTGTC+TGG | 0.466169 | 1.3:+5466855 | None:intergenic |
| AACTTTCATCTTCAATCAAG+TGG | 0.468283 | 1.3:-5466879 | MS.gene051648:CDS |
| TCCAGAACTAGACCAATTCA+TGG | 0.475218 | 1.3:-5466201 | MS.gene051648:intron |
| CACTTTGCAATGGACCCCTT+CGG | 0.484187 | 1.3:-5465879 | MS.gene051648:CDS |
| GGTGGGAATTGCATTACAAA+TGG | 0.484691 | 1.3:-5457038 | MS.gene051648:CDS |
| TCTGCTCGAGGATCAATCTC+TGG | 0.491728 | 1.3:+5457189 | None:intergenic |
| GATTGGAGCTCCACCGGAAG+TGG | 0.502488 | 1.3:-5466303 | MS.gene051648:CDS |
| GGACCCCTTCGGATCTTCCC+TGG | 0.503797 | 1.3:-5465868 | MS.gene051648:intron |
| TCAATCAAAGGAAGAGGCAC+TGG | 0.507111 | 1.3:-5456343 | MS.gene051648:CDS |
| TTATAACGTACCGAAGGATA+AGG | 0.509147 | 1.3:+5457015 | None:intergenic |
| CACTATATTTCTTCAGCAAG+TGG | 0.509181 | 1.3:+5457148 | None:intergenic |
| GACAAAAGCTACTTAATTGG+TGG | 0.509834 | 1.3:-5457056 | MS.gene051648:CDS |
| TTATATGGATGGTCATTACA+TGG | 0.510806 | 1.3:-5456258 | MS.gene051648:CDS |
| AAGGCCTATACAAGAGGCTA+TGG | 0.514686 | 1.3:-5465935 | MS.gene051648:CDS |
| TGGCTCGTTTGGTTGCGTCT+AGG | 0.518848 | 1.3:-5466280 | MS.gene051648:CDS |
| AGCTTACATGGATTGTCAAA+AGG | 0.519024 | 1.3:-5466598 | MS.gene051648:intron |
| GAGGATCAAGAGAATAGTGG+TGG | 0.527205 | 1.3:-5457228 | MS.gene051648:CDS |
| AATTCACGGTCTTCTGCTCG+AGG | 0.528363 | 1.3:+5457177 | None:intergenic |
| CATCATCATCAAGGAGGAGG+AGG | 0.530576 | 1.3:-5466702 | MS.gene051648:CDS |
| CACTTGCTGAAGAAATATAG+TGG | 0.533238 | 1.3:-5457147 | MS.gene051648:CDS |
| GAAGAGGATCAAGAGAATAG+TGG | 0.545053 | 1.3:-5457231 | MS.gene051648:CDS |
| GCTTCACCACTAGAACTGCT+TGG | 0.545490 | 1.3:+5466675 | None:intergenic |
| TATGTAGATTGGAGCTCCAC+CGG | 0.547316 | 1.3:-5466309 | MS.gene051648:intron |
| GGAATCAGAGAAGGTAGCAT+TGG | 0.547951 | 1.3:-5456411 | MS.gene051648:CDS |
| ATGCATAATCATCATCATCA+AGG | 0.555030 | 1.3:-5466711 | MS.gene051648:CDS |
| ATAAACTGCATGTCTTCTGA+TGG | 0.556878 | 1.3:+5456317 | None:intergenic |
| AGACATGCAGTTTATGGTGA+TGG | 0.558113 | 1.3:-5456309 | MS.gene051648:CDS |
| CAGCTAAATACACTTTGCAA+TGG | 0.562110 | 1.3:-5465889 | MS.gene051648:CDS |
| TAATCATGGCCCTAAACGGT+AGG | 0.564867 | 1.3:+5456226 | None:intergenic |
| TGGAGCTCCACCGGAAGTGG+TGG | 0.570424 | 1.3:-5466300 | MS.gene051648:CDS |
| GGTTCATCAATCAAAGGAAG+AGG | 0.570775 | 1.3:-5456349 | MS.gene051648:CDS |
| TGTAAAAGACTAGAGTATTG+AGG | 0.573212 | 1.3:+5466621 | None:intergenic |
| AGTGCAGCTCTTTATATGGA+TGG | 0.581356 | 1.3:-5456269 | MS.gene051648:CDS |
| GGGAGTCCAAGCAGTTCTAG+TGG | 0.587384 | 1.3:-5466681 | MS.gene051648:CDS |
| TATTTGTTCTCATTAAAGCT+GGG | 0.591019 | 1.3:+5466754 | None:intergenic |
| ATAACTGGTTCATCAATCAA+AGG | 0.592016 | 1.3:-5456355 | MS.gene051648:CDS |
| ACAAAAGCTACTTAATTGGT+GGG | 0.596461 | 1.3:-5457055 | MS.gene051648:CDS |
| AATCATCATCATCAAGGAGG+AGG | 0.600518 | 1.3:-5466705 | MS.gene051648:CDS |
| ACTCACCAGGGAAGATCCGA+AGG | 0.608503 | 1.3:+5465863 | None:intergenic |
| ATCATCATCAAGGAGGAGGA+GGG | 0.622603 | 1.3:-5466701 | MS.gene051648:CDS |
| ATTAACAAGGCCTATACAAG+AGG | 0.622954 | 1.3:-5465941 | MS.gene051648:CDS |
| AGGCGTTGGTTCATCAGAAG+AGG | 0.623533 | 1.3:-5457247 | MS.gene051648:CDS |
| AATCATGGCCCTAAACGGTA+GGG | 0.623950 | 1.3:+5456227 | None:intergenic |
| ATGCAGTTTATGGTGATGGA+TGG | 0.624056 | 1.3:-5456305 | MS.gene051648:CDS |
| ATATAAAGAGCTGCACTCTG+TGG | 0.627158 | 1.3:+5456275 | None:intergenic |
| AAACGAGCCACCACTTCCGG+TGG | 0.627824 | 1.3:+5466293 | None:intergenic |
| GATGGTCATTACATGGCTGA+TGG | 0.643940 | 1.3:-5456251 | MS.gene051648:CDS |
| CACTATATAGGAATCAGAGA+AGG | 0.647456 | 1.3:-5456420 | MS.gene051648:intron |
| CATGCTTGTGAAGTATAGAG+AGG | 0.648293 | 1.3:-5465965 | MS.gene051648:CDS |
| CTCACCAGGGAAGATCCGAA+GGG | 0.678902 | 1.3:+5465864 | None:intergenic |
| CTAGGCAAGAGTTTGAAGCA+AGG | 0.689197 | 1.3:-5466262 | MS.gene051648:CDS |
| CATAATCATCATCATCAAGG+AGG | 0.690149 | 1.3:-5466708 | MS.gene051648:CDS |
| TTATGCATAATATTGGTGTG+TGG | 0.710252 | 1.3:+5466726 | None:intergenic |
| AGTATAGAGAGGAATTAACA+AGG | 0.714149 | 1.3:-5465954 | MS.gene051648:CDS |
| TCACCAGGGAAGATCCGAAG+GGG | 0.724320 | 1.3:+5465865 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 5456229 | 5466907 | 5456229 | ID=MS.gene051648 |
| chr1.3 | mRNA | 5456229 | 5466907 | 5456229 | ID=MS.gene051648.t1;Parent=MS.gene051648 |
| chr1.3 | exon | 5466599 | 5466907 | 5466599 | ID=MS.gene051648.t1.exon1;Parent=MS.gene051648.t1 |
| chr1.3 | CDS | 5466599 | 5466907 | 5466599 | ID=cds.MS.gene051648.t1;Parent=MS.gene051648.t1 |
| chr1.3 | exon | 5466202 | 5466324 | 5466202 | ID=MS.gene051648.t1.exon2;Parent=MS.gene051648.t1 |
| chr1.3 | CDS | 5466202 | 5466324 | 5466202 | ID=cds.MS.gene051648.t1;Parent=MS.gene051648.t1 |
| chr1.3 | exon | 5465869 | 5466001 | 5465869 | ID=MS.gene051648.t1.exon3;Parent=MS.gene051648.t1 |
| chr1.3 | CDS | 5465869 | 5466001 | 5465869 | ID=cds.MS.gene051648.t1;Parent=MS.gene051648.t1 |
| chr1.3 | exon | 5457026 | 5457282 | 5457026 | ID=MS.gene051648.t1.exon4;Parent=MS.gene051648.t1 |
| chr1.3 | CDS | 5457026 | 5457282 | 5457026 | ID=cds.MS.gene051648.t1;Parent=MS.gene051648.t1 |
| chr1.3 | exon | 5456229 | 5456432 | 5456229 | ID=MS.gene051648.t1.exon5;Parent=MS.gene051648.t1 |
| chr1.3 | CDS | 5456229 | 5456432 | 5456229 | ID=cds.MS.gene051648.t1;Parent=MS.gene051648.t1 |
| Gene Sequence |
| Protein sequence |
