Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08775.t1 | XP_003629711.2 | 96.3 | 728 | 26 | 1 | 1 | 727 | 1 | 728 | 0.00E+00 | 1374 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08775.t1 | Q84P17 | 68.1 | 730 | 222 | 7 | 4 | 727 | 3 | 727 | 1.2e-289 | 996.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08775.t1 | G7LHZ3 | 96.3 | 728 | 26 | 1 | 1 | 727 | 1 | 728 | 0.0e+00 | 1374.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene08775 | MS.gene83231 | PPI |
| MS.gene045801 | MS.gene08775 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08775.t1 | MTR_8g085680 | 96.429 | 728 | 25 | 1 | 1 | 727 | 1 | 728 | 0.0 | 1445 |
| MS.gene08775.t1 | MTR_8g085680 | 95.965 | 694 | 27 | 1 | 1 | 693 | 1 | 694 | 0.0 | 1352 |
| MS.gene08775.t1 | MTR_8g086050 | 86.008 | 729 | 100 | 1 | 1 | 727 | 1 | 729 | 0.0 | 1266 |
| MS.gene08775.t1 | MTR_8g086050 | 86.517 | 623 | 82 | 1 | 1 | 621 | 1 | 623 | 0.0 | 1083 |
| MS.gene08775.t1 | MTR_8g085680 | 96.175 | 549 | 20 | 1 | 1 | 548 | 1 | 549 | 0.0 | 1066 |
| MS.gene08775.t1 | MTR_8g086050 | 86.464 | 591 | 78 | 1 | 1 | 589 | 1 | 591 | 0.0 | 1022 |
| MS.gene08775.t1 | MTR_2g056120 | 50.137 | 730 | 344 | 11 | 1 | 720 | 1 | 720 | 0.0 | 721 |
| MS.gene08775.t1 | MTR_7g084850 | 24.880 | 623 | 428 | 22 | 123 | 721 | 118 | 724 | 4.73e-30 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08775.t1 | AT1G55320 | 69.452 | 730 | 212 | 7 | 4 | 727 | 3 | 727 | 0.0 | 1043 |
| MS.gene08775.t1 | AT1G55320 | 74.560 | 511 | 127 | 3 | 220 | 727 | 1 | 511 | 0.0 | 791 |
| MS.gene08775.t1 | AT5G23050 | 50.484 | 723 | 345 | 8 | 1 | 719 | 1 | 714 | 0.0 | 699 |
| MS.gene08775.t1 | AT5G23050 | 49.073 | 593 | 291 | 7 | 1 | 591 | 1 | 584 | 0.0 | 547 |
| MS.gene08775.t1 | AT5G36880 | 24.961 | 649 | 428 | 25 | 106 | 721 | 97 | 719 | 1.73e-25 | 112 |
| MS.gene08775.t1 | AT5G36880 | 24.961 | 649 | 428 | 25 | 106 | 721 | 47 | 669 | 2.71e-25 | 112 |
| MS.gene08775.t1 | AT5G36880 | 24.961 | 649 | 428 | 25 | 106 | 721 | 47 | 669 | 2.71e-25 | 112 |
| MS.gene08775.t1 | AT5G36880 | 24.961 | 649 | 428 | 25 | 106 | 721 | 47 | 669 | 2.71e-25 | 112 |
| MS.gene08775.t1 | AT5G36880 | 24.961 | 649 | 428 | 25 | 106 | 721 | 47 | 669 | 2.71e-25 | 112 |
| MS.gene08775.t1 | AT5G36880 | 24.913 | 574 | 374 | 23 | 106 | 646 | 47 | 596 | 2.90e-18 | 89.7 |
Find 164 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGAGAAGATTTACTTTA+AGG | 0.083745 | 4.2:+12750413 | MS.gene08775:CDS |
| CAACCTTAATCCTTTATTTA+AGG | 0.093679 | 4.2:+12751498 | MS.gene08775:CDS |
| CTTCTTCTCCTCCTCTTTAT+TGG | 0.129077 | 4.2:+12744343 | MS.gene08775:CDS |
| TGCATCACCCTTGGAGAAAT+TGG | 0.134060 | 4.2:-12747102 | None:intergenic |
| TATTGCTGGCCTACAAATTT+AGG | 0.157820 | 4.2:+12748960 | MS.gene08775:CDS |
| GGATTCAGGTGTTACCATTT+TGG | 0.179929 | 4.2:+12749761 | MS.gene08775:intron |
| ATACTCTCATCTTGTTTGTT+AGG | 0.203184 | 4.2:-12746900 | None:intergenic |
| GCCTCCACAACATTCAATTA+TGG | 0.214028 | 4.2:-12749999 | None:intergenic |
| ACTACAATTGTTCAGGATTC+AGG | 0.226067 | 4.2:+12749747 | MS.gene08775:intron |
| TTAGTCATCCTTGATGAAAA+TGG | 0.254005 | 4.2:+12750109 | MS.gene08775:CDS |
| TGACCTTAAATAAAGGATTA+AGG | 0.255216 | 4.2:-12751501 | None:intergenic |
| CTACTACAGCCTCAAGCTTT+TGG | 0.257165 | 4.2:+12750055 | MS.gene08775:CDS |
| AGGCGAGTTGCAATTTCTTT+TGG | 0.267236 | 4.2:-12747224 | None:intergenic |
| TTATATTCATGCTTCCTATC+TGG | 0.270357 | 4.2:+12749005 | MS.gene08775:CDS |
| TAGGGCTGATGAATGCATTT+TGG | 0.283163 | 4.2:+12751345 | MS.gene08775:CDS |
| GGGCTTATTCCCTGTATATA+TGG | 0.294420 | 4.2:+12750362 | MS.gene08775:CDS |
| GCTTGGAACTGTTCCCAAAA+TGG | 0.311835 | 4.2:-12749775 | None:intergenic |
| CACGGAGGAACCTGGCTTCC+TGG | 0.313286 | 4.2:+12746831 | MS.gene08775:CDS |
| CTTTATTCCACCAAGATTCA+TGG | 0.317320 | 4.2:-12751034 | None:intergenic |
| CATGAGAAGATTTACTTTAA+GGG | 0.321098 | 4.2:+12750414 | MS.gene08775:CDS |
| CCTCCACAACATTCAATTAT+GGG | 0.325262 | 4.2:-12749998 | None:intergenic |
| TGAGTCCAAGGAATTGCTTT+TGG | 0.327617 | 4.2:-12748873 | None:intergenic |
| GAGAGTTTGACCTTAAATAA+AGG | 0.331168 | 4.2:-12751508 | None:intergenic |
| CAACACTTCCTTCAATTCAT+TGG | 0.331370 | 4.2:-12744184 | None:intergenic |
| CATGAATCTTGGTGGAATAA+AGG | 0.333589 | 4.2:+12751035 | MS.gene08775:CDS |
| AAAAGAGGAAAACTAGTAAT+AGG | 0.341960 | 4.2:-12746603 | None:intergenic |
| TCTCCGCTAGGTCATGGTTT+TGG | 0.352620 | 4.2:+12749053 | MS.gene08775:CDS |
| TACTCTCATCTTGTTTGTTA+GGG | 0.358590 | 4.2:-12746899 | None:intergenic |
| GAATCGATTGATTGATAGAT+TGG | 0.364438 | 4.2:-12748735 | None:intergenic |
| AGGATTAAGGTTGGTTTGAA+TGG | 0.369128 | 4.2:-12751488 | None:intergenic |
| ACAAATATAACCAGTTGTTC+TGG | 0.372196 | 4.2:-12751406 | None:intergenic |
| CAAATGTTGATGATGACCTT+TGG | 0.373899 | 4.2:+12749951 | MS.gene08775:CDS |
| AAATTGAGCGCGTCTGTGAT+AGG | 0.374839 | 4.2:+12751326 | MS.gene08775:CDS |
| GATGTATCTAAAATGCAATT+TGG | 0.379893 | 4.2:-12746792 | None:intergenic |
| TTCCTTCAATTCATTGGCTT+CGG | 0.393896 | 4.2:-12744178 | None:intergenic |
| CTCATCTTGTTTGTTAGGGT+GGG | 0.396642 | 4.2:-12746895 | None:intergenic |
| TACACAATGTATGGAGGGCT+TGG | 0.407496 | 4.2:+12749818 | MS.gene08775:CDS |
| TCAGTTGCTCCCATATATAC+AGG | 0.409158 | 4.2:-12750372 | None:intergenic |
| AACCCGGAGACGTCTATTGC+TGG | 0.420668 | 4.2:+12748946 | MS.gene08775:CDS |
| TCCATCTGCAGCACTTCGTA+TGG | 0.431839 | 4.2:-12748904 | None:intergenic |
| GCAGGCAATCCGCACAAACC+TGG | 0.433498 | 4.2:+12746524 | MS.gene08775:CDS |
| TAGACTCCCCATGATATAAC+AGG | 0.435997 | 4.2:-12750035 | None:intergenic |
| CTGGCCTACAAATTTAGGTT+GGG | 0.439023 | 4.2:+12748965 | MS.gene08775:CDS |
| TCTCATCTTGTTTGTTAGGG+TGG | 0.442425 | 4.2:-12746896 | None:intergenic |
| TAAGAGAACATGACTTATCA+TGG | 0.450422 | 4.2:+12748553 | MS.gene08775:CDS |
| TTGGAAGAGTACACAATGTA+TGG | 0.451022 | 4.2:+12749809 | MS.gene08775:CDS |
| GTATTGCACTGCAGGTGTAC+TGG | 0.452092 | 4.2:+12746727 | MS.gene08775:intron |
| CCAACACAAGGTACATCATC+TGG | 0.453253 | 4.2:-12750333 | None:intergenic |
| CACAAACCTGGGTCGTCTCA+TGG | 0.460302 | 4.2:+12746536 | MS.gene08775:CDS |
| TGCCGAAGCCAATGAATTGA+AGG | 0.463190 | 4.2:+12744176 | MS.gene08775:CDS |
| TTCAATTCATTGGCTTCGGC+AGG | 0.464114 | 4.2:-12744174 | None:intergenic |
| AAATGGAGGTCCAGAACAAC+TGG | 0.465792 | 4.2:+12751396 | MS.gene08775:CDS |
| CCACATTACTTCCAGGTTGG+TGG | 0.467372 | 4.2:+12747064 | MS.gene08775:intron |
| GGTTTCTAAATTTAGAGAGC+AGG | 0.469719 | 4.2:+12746506 | MS.gene08775:intron |
| GCCATCTTGTTGTGCAAGGA+AGG | 0.472268 | 4.2:+12751001 | MS.gene08775:CDS |
| ATGAGAGTATAGCTATCATC+TGG | 0.476182 | 4.2:+12746913 | MS.gene08775:CDS |
| TTTAGGAGCATCCTTGTACA+AGG | 0.477406 | 4.2:+12746578 | MS.gene08775:CDS |
| ATCACCCAACCTAAATTTGT+AGG | 0.482826 | 4.2:-12748969 | None:intergenic |
| TGTTTGTTAGGGTGGGAGCT+AGG | 0.484688 | 4.2:-12746888 | None:intergenic |
| GGGATCCAAAAGCAATTCCT+TGG | 0.486702 | 4.2:+12748868 | MS.gene08775:CDS |
| ACAAATTTAGGTTGGGTGAT+GGG | 0.487973 | 4.2:+12748972 | MS.gene08775:CDS |
| GTACCTTGTGTTGGTGAAGC+GGG | 0.488589 | 4.2:+12750342 | MS.gene08775:CDS |
| GGCTTATTCCCTGTATATAT+GGG | 0.489550 | 4.2:+12750363 | MS.gene08775:CDS |
| GCTTGCATCCTGTTATATCA+TGG | 0.489645 | 4.2:+12750027 | MS.gene08775:CDS |
| GTCAGTGTTTCTGCTGCAAA+TGG | 0.491410 | 4.2:+12751379 | MS.gene08775:CDS |
| AATTGCAATTGCATCACCCT+TGG | 0.492471 | 4.2:-12747111 | None:intergenic |
| TACGAAGTGCTGCAGATGGA+TGG | 0.492810 | 4.2:+12748907 | MS.gene08775:CDS |
| GCTGGCCTACAAATTTAGGT+TGG | 0.493594 | 4.2:+12748964 | MS.gene08775:CDS |
| CATCAAAACACGGAGGAACC+TGG | 0.494365 | 4.2:+12746823 | MS.gene08775:CDS |
| CTTAAATAAAGGATTAAGGT+TGG | 0.496808 | 4.2:-12751497 | None:intergenic |
| GATGAGGGTATGATGGTTTG+AGG | 0.504019 | 4.2:-12744272 | None:intergenic |
| GATATAATCAAAAGAACTGT+GGG | 0.506716 | 4.2:+12750976 | MS.gene08775:CDS |
| GAGCAAGAGTTGCTCCAGAT+AGG | 0.507851 | 4.2:-12749019 | None:intergenic |
| GCAGGAAATTCCCTTTGTAC+AGG | 0.508196 | 4.2:+12747411 | MS.gene08775:CDS |
| AGAAGCTGATGCAAGGGATG+AGG | 0.508957 | 4.2:-12744288 | None:intergenic |
| GTACTGGTCTCTTGTTCTAA+AGG | 0.511821 | 4.2:+12746743 | MS.gene08775:CDS |
| AGGCCAGCAATAGACGTCTC+CGG | 0.518061 | 4.2:-12748949 | None:intergenic |
| AAGTACAGAACCAGGAAGCC+AGG | 0.518355 | 4.2:-12746841 | None:intergenic |
| ATCAACATTTGAAGTTTCCC+CGG | 0.519896 | 4.2:-12749939 | None:intergenic |
| TACAAATTTAGGTTGGGTGA+TGG | 0.523734 | 4.2:+12748971 | MS.gene08775:CDS |
| GCTATCATCTGGAGGGATGA+AGG | 0.523832 | 4.2:+12746924 | MS.gene08775:CDS |
| CAGGCAATCCGCACAAACCT+GGG | 0.524737 | 4.2:+12746525 | MS.gene08775:CDS |
| CTTGCATCCTGTTATATCAT+GGG | 0.525021 | 4.2:+12750028 | MS.gene08775:CDS |
| GGCCAGCAATAGACGTCTCC+GGG | 0.527044 | 4.2:-12748948 | None:intergenic |
| AATGTATGGAGGGCTTGGAT+TGG | 0.527992 | 4.2:+12749823 | MS.gene08775:CDS |
| AATTGAGCGCGTCTGTGATA+GGG | 0.528177 | 4.2:+12751327 | MS.gene08775:CDS |
| CTCCGTGTTTCCGATGCAAA+GGG | 0.530604 | 4.2:+12747245 | MS.gene08775:CDS |
| CACTCTCCTCAGCTGACACA+TGG | 0.531737 | 4.2:+12744226 | MS.gene08775:CDS |
| ATATATAATCACAGCATTGA+CGG | 0.539607 | 4.2:-12747147 | None:intergenic |
| GCTGATGATACCATGAATCT+TGG | 0.539803 | 4.2:+12751024 | MS.gene08775:CDS |
| CCTCCGTGTTTCCGATGCAA+AGG | 0.541069 | 4.2:+12747244 | MS.gene08775:CDS |
| CATGGATCTCCGCTAGGTCA+TGG | 0.541719 | 4.2:+12749047 | MS.gene08775:CDS |
| CCGCTTCCAACAAAATACTA+AGG | 0.542322 | 4.2:+12751744 | MS.gene08775:CDS |
| TAGTAGAGAAGCTGATGCAA+GGG | 0.542883 | 4.2:-12744294 | None:intergenic |
| CCCTTCCTTGCACAACAAGA+TGG | 0.543979 | 4.2:-12751002 | None:intergenic |
| TAGCAGGTTCTTCGAAGACA+TGG | 0.543982 | 4.2:+12750952 | MS.gene08775:intron |
| AAGCATGAATATAAAAGAGT+TGG | 0.545939 | 4.2:-12748996 | None:intergenic |
| AACACATCCTGCTAAAACAA+TGG | 0.550057 | 4.2:-12747174 | None:intergenic |
| TATACCTTTCCTTTGTAAAG+CGG | 0.551050 | 4.2:-12750441 | None:intergenic |
| ACGAAGTGCTGCAGATGGAT+GGG | 0.552217 | 4.2:+12748908 | MS.gene08775:CDS |
| CCTTAAAGTAAATCTTCTCA+TGG | 0.553450 | 4.2:-12750413 | None:intergenic |
| AAACCCATAATTGAATGTTG+TGG | 0.554187 | 4.2:+12749995 | MS.gene08775:CDS |
| ATGATGGTTTGAGGACTCTA+CGG | 0.555176 | 4.2:-12744263 | None:intergenic |
| GAGGAGGAGAAGAAGAAGAG+TGG | 0.555603 | 4.2:-12744335 | None:intergenic |
| AGAGTGGTGATGATGATAGA+TGG | 0.557518 | 4.2:-12744319 | None:intergenic |
| TACCCTTTGCATCGGAAACA+CGG | 0.557533 | 4.2:-12747247 | None:intergenic |
| ACTTCATATTAAGAGGTGGC+AGG | 0.560885 | 4.2:+12747393 | MS.gene08775:CDS |
| AAGGGAATGCCGCTTTACAA+AGG | 0.566824 | 4.2:+12750432 | MS.gene08775:CDS |
| GTATCTAAAATGCAATTTGG+AGG | 0.568095 | 4.2:-12746789 | None:intergenic |
| GGTCGTCTCATGGAAAATCA+TGG | 0.570483 | 4.2:+12746546 | MS.gene08775:CDS |
| CCCATACGAAGTGCTGCAGA+TGG | 0.572789 | 4.2:+12748903 | MS.gene08775:CDS |
| GAAGCTGATGCAAGGGATGA+GGG | 0.577809 | 4.2:-12744287 | None:intergenic |
| GATGATACCATGAATCTTGG+TGG | 0.578979 | 4.2:+12751027 | MS.gene08775:CDS |
| CTGTACCATGGATCTCCGCT+AGG | 0.582836 | 4.2:+12749041 | MS.gene08775:CDS |
| TTTCTTCAGAATTTCCGCAT+CGG | 0.583312 | 4.2:-12751452 | None:intergenic |
| CGTGAAAATACCCTTTGCAT+CGG | 0.583654 | 4.2:-12747255 | None:intergenic |
| CCAACATCATTGTCTATCAC+AGG | 0.584997 | 4.2:-12748522 | None:intergenic |
| ATAGTAGAGAAGCTGATGCA+AGG | 0.587281 | 4.2:-12744295 | None:intergenic |
| AGAGAAGGGAACCAATAAAG+AGG | 0.590321 | 4.2:-12744354 | None:intergenic |
| GCAACTCTTGCTCTGTACCA+TGG | 0.591404 | 4.2:+12749029 | MS.gene08775:CDS |
| CCATCTGCAGCACTTCGTAT+GGG | 0.591719 | 4.2:-12748903 | None:intergenic |
| CCATCTTGTTGTGCAAGGAA+GGG | 0.596864 | 4.2:+12751002 | MS.gene08775:CDS |
| ATGGGCGAAAGTTGAGTCCA+AGG | 0.598596 | 4.2:-12748885 | None:intergenic |
| CCCATAATTGAATGTTGTGG+AGG | 0.600562 | 4.2:+12749998 | MS.gene08775:CDS |
| TGCAAGGGATGAGGGTATGA+TGG | 0.600924 | 4.2:-12744279 | None:intergenic |
| TTCTTCCAGTCGAGTCGTTG+AGG | 0.601975 | 4.2:+12748473 | MS.gene08775:intron |
| CTAAATGCTCCAAAAGCTTG+AGG | 0.602109 | 4.2:-12750064 | None:intergenic |
| CATGACCTAGCGGAGATCCA+TGG | 0.602172 | 4.2:-12749046 | None:intergenic |
| CAGTTGCTCCCATATATACA+GGG | 0.602896 | 4.2:-12750371 | None:intergenic |
| TTAGAGTGACTTACAGAGAA+GGG | 0.603250 | 4.2:-12744368 | None:intergenic |
| GAAGCGGTTCTAGGAAACAT+AGG | 0.603896 | 4.2:-12751728 | None:intergenic |
| GCAATTTGGAGGTTCGACAA+AGG | 0.606887 | 4.2:-12746778 | None:intergenic |
| AGTAATAGGATCCTTGTACA+AGG | 0.606933 | 4.2:-12746589 | None:intergenic |
| AGTGTTTCTGCTGCAAATGG+AGG | 0.607240 | 4.2:+12751382 | MS.gene08775:CDS |
| ATTAGAGTGACTTACAGAGA+AGG | 0.610072 | 4.2:-12744369 | None:intergenic |
| GCTTTAATCGATATTCAACC+CGG | 0.613037 | 4.2:+12748930 | MS.gene08775:CDS |
| TGAGACGACCCAGGTTTGTG+CGG | 0.620787 | 4.2:-12746533 | None:intergenic |
| TGTACCTTGTGTTGGTGAAG+CGG | 0.622459 | 4.2:+12750341 | MS.gene08775:CDS |
| TAGGACTTCATATTAAGAGG+TGG | 0.624381 | 4.2:+12747389 | MS.gene08775:intron |
| AGAGTATAGCTATCATCTGG+AGG | 0.624416 | 4.2:+12746916 | MS.gene08775:CDS |
| ATAGATGCCAATTTCTCCAA+GGG | 0.625023 | 4.2:+12747095 | MS.gene08775:CDS |
| AATAGATGCCAATTTCTCCA+AGG | 0.627081 | 4.2:+12747094 | MS.gene08775:CDS |
| CCTGTGATAGACAATGATGT+TGG | 0.628362 | 4.2:+12748522 | MS.gene08775:CDS |
| GAAGAGTACACAATGTATGG+AGG | 0.628430 | 4.2:+12749812 | MS.gene08775:CDS |
| GAAGGGAACCAATAAAGAGG+AGG | 0.628826 | 4.2:-12744351 | None:intergenic |
| GTGGCGCCATGTGTCAGCTG+AGG | 0.628901 | 4.2:-12744232 | None:intergenic |
| AAGAGTACACAATGTATGGA+GGG | 0.632020 | 4.2:+12749813 | MS.gene08775:CDS |
| GAGTATAGCTATCATCTGGA+GGG | 0.636952 | 4.2:+12746917 | MS.gene08775:CDS |
| TGAGGACTCTACGGCTGACG+AGG | 0.637199 | 4.2:-12744254 | None:intergenic |
| GGAGGCCATCTTGTTGTGCA+AGG | 0.637436 | 4.2:+12750997 | MS.gene08775:CDS |
| GCAATATTAAGTACAGAACC+AGG | 0.641645 | 4.2:-12746849 | None:intergenic |
| AGATATAATCAAAAGAACTG+TGG | 0.642418 | 4.2:+12750975 | MS.gene08775:CDS |
| GCTGAGGAGAGTGAAGAGAG+TGG | 0.642669 | 4.2:-12744216 | None:intergenic |
| CCAGATGATGTACCTTGTGT+TGG | 0.644504 | 4.2:+12750333 | MS.gene08775:CDS |
| TTGCATCCTGTTATATCATG+GGG | 0.646094 | 4.2:+12750029 | MS.gene08775:CDS |
| GGACTCTACGGCTGACGAGG+TGG | 0.659775 | 4.2:-12744251 | None:intergenic |
| ATAATCAAAAGAACTGTGGG+AGG | 0.662151 | 4.2:+12750979 | MS.gene08775:CDS |
| AATGCCGCTTTACAAAGGAA+AGG | 0.670295 | 4.2:+12750437 | MS.gene08775:CDS |
| TTTCCAAAACCATGACCTAG+CGG | 0.677256 | 4.2:-12749056 | None:intergenic |
| TCTTCTGACCCATCAAAACA+CGG | 0.682602 | 4.2:+12746813 | MS.gene08775:CDS |
| GACAGGATACGATTCCGATG+CGG | 0.708590 | 4.2:+12751438 | MS.gene08775:CDS |
| AAGCCCGCTTCACCAACACA+AGG | 0.728951 | 4.2:-12750345 | None:intergenic |
| CCTTTGCATCGGAAACACGG+AGG | 0.773889 | 4.2:-12747244 | None:intergenic |
| TCTGACCCATCAAAACACGG+AGG | 0.817018 | 4.2:+12746816 | MS.gene08775:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 12744114 | 12751820 | 12744114 | ID=MS.gene08775 |
| chr4.2 | mRNA | 12744114 | 12751820 | 12744114 | ID=MS.gene08775.t1;Parent=MS.gene08775 |
| chr4.2 | exon | 12744114 | 12744376 | 12744114 | ID=MS.gene08775.t1.exon1;Parent=MS.gene08775.t1 |
| chr4.2 | CDS | 12744114 | 12744376 | 12744114 | ID=cds.MS.gene08775.t1;Parent=MS.gene08775.t1 |
| chr4.2 | exon | 12746521 | 12746653 | 12746521 | ID=MS.gene08775.t1.exon2;Parent=MS.gene08775.t1 |
| chr4.2 | CDS | 12746521 | 12746653 | 12746521 | ID=cds.MS.gene08775.t1;Parent=MS.gene08775.t1 |
| chr4.2 | exon | 12746741 | 12747003 | 12746741 | ID=MS.gene08775.t1.exon3;Parent=MS.gene08775.t1 |
| chr4.2 | CDS | 12746741 | 12747003 | 12746741 | ID=cds.MS.gene08775.t1;Parent=MS.gene08775.t1 |
| chr4.2 | exon | 12747079 | 12747280 | 12747079 | ID=MS.gene08775.t1.exon4;Parent=MS.gene08775.t1 |
| chr4.2 | CDS | 12747079 | 12747280 | 12747079 | ID=cds.MS.gene08775.t1;Parent=MS.gene08775.t1 |
| chr4.2 | exon | 12747392 | 12747432 | 12747392 | ID=MS.gene08775.t1.exon5;Parent=MS.gene08775.t1 |
| chr4.2 | CDS | 12747392 | 12747432 | 12747392 | ID=cds.MS.gene08775.t1;Parent=MS.gene08775.t1 |
| chr4.2 | exon | 12748482 | 12748610 | 12748482 | ID=MS.gene08775.t1.exon6;Parent=MS.gene08775.t1 |
| chr4.2 | CDS | 12748482 | 12748610 | 12748482 | ID=cds.MS.gene08775.t1;Parent=MS.gene08775.t1 |
| chr4.2 | exon | 12748719 | 12748792 | 12748719 | ID=MS.gene08775.t1.exon7;Parent=MS.gene08775.t1 |
| chr4.2 | CDS | 12748719 | 12748792 | 12748719 | ID=cds.MS.gene08775.t1;Parent=MS.gene08775.t1 |
| chr4.2 | exon | 12748868 | 12749088 | 12748868 | ID=MS.gene08775.t1.exon8;Parent=MS.gene08775.t1 |
| chr4.2 | CDS | 12748868 | 12749088 | 12748868 | ID=cds.MS.gene08775.t1;Parent=MS.gene08775.t1 |
| chr4.2 | exon | 12749762 | 12749856 | 12749762 | ID=MS.gene08775.t1.exon9;Parent=MS.gene08775.t1 |
| chr4.2 | CDS | 12749762 | 12749856 | 12749762 | ID=cds.MS.gene08775.t1;Parent=MS.gene08775.t1 |
| chr4.2 | exon | 12749925 | 12750141 | 12749925 | ID=MS.gene08775.t1.exon10;Parent=MS.gene08775.t1 |
| chr4.2 | CDS | 12749925 | 12750141 | 12749925 | ID=cds.MS.gene08775.t1;Parent=MS.gene08775.t1 |
| chr4.2 | exon | 12750333 | 12750458 | 12750333 | ID=MS.gene08775.t1.exon11;Parent=MS.gene08775.t1 |
| chr4.2 | CDS | 12750333 | 12750458 | 12750333 | ID=cds.MS.gene08775.t1;Parent=MS.gene08775.t1 |
| chr4.2 | exon | 12750958 | 12751056 | 12750958 | ID=MS.gene08775.t1.exon12;Parent=MS.gene08775.t1 |
| chr4.2 | CDS | 12750958 | 12751056 | 12750958 | ID=cds.MS.gene08775.t1;Parent=MS.gene08775.t1 |
| chr4.2 | exon | 12751313 | 12751519 | 12751313 | ID=MS.gene08775.t1.exon13;Parent=MS.gene08775.t1 |
| chr4.2 | CDS | 12751313 | 12751519 | 12751313 | ID=cds.MS.gene08775.t1;Parent=MS.gene08775.t1 |
| chr4.2 | exon | 12751707 | 12751820 | 12751707 | ID=MS.gene08775.t1.exon14;Parent=MS.gene08775.t1 |
| chr4.2 | CDS | 12751707 | 12751820 | 12751707 | ID=cds.MS.gene08775.t1;Parent=MS.gene08775.t1 |
| Gene Sequence |
| Protein sequence |
