Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09702.t1 | XP_003611397.1 | 98.8 | 335 | 4 | 0 | 1 | 335 | 1 | 335 | 8.90E-199 | 702.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09702.t1 | G7JYM1 | 98.8 | 335 | 4 | 0 | 1 | 335 | 1 | 335 | 6.4e-199 | 702.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052494 | MS.gene09702 | 0.846603 | 1.96E-59 | -1.69E-46 |
| MS.gene05589 | MS.gene09702 | -0.805977 | 1.03E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09702.t1 | MTR_5g013540 | 98.806 | 335 | 4 | 0 | 1 | 335 | 1 | 335 | 0.0 | 680 |
| MS.gene09702.t1 | MTR_7g081200 | 54.683 | 331 | 142 | 4 | 1 | 329 | 1 | 325 | 6.19e-133 | 382 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09702.t1 | AT4G17070 | 61.231 | 325 | 115 | 3 | 17 | 334 | 17 | 337 | 8.59e-149 | 422 |
Find 91 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAACGTACCTCGCCGAATT+TGG | 0.198643 | 5.2:+5559009 | None:intergenic |
| GGCCCTTCTTCTTGCCGTTC+AGG | 0.233733 | 5.2:+5558037 | None:intergenic |
| TGGACTTCTGGTCTCATCTT+TGG | 0.244257 | 5.2:-5557995 | MS.gene09702:CDS |
| GACTCTCTGCACGGTAAAAT+TGG | 0.245884 | 5.2:+5557318 | None:intergenic |
| AATCAAACGGTTTAACAAAA+TGG | 0.290860 | 5.2:+5559345 | None:intergenic |
| GGATTGAACATTTGGAGCTT+TGG | 0.296628 | 5.2:-5559177 | MS.gene09702:CDS |
| GTTTCGGAGTTTAGGAATAT+TGG | 0.308114 | 5.2:-5559250 | MS.gene09702:CDS |
| GACCTTGTCTTTGTGATACT+TGG | 0.312234 | 5.2:-5559063 | MS.gene09702:CDS |
| GATTGAACATTTGGAGCTTT+GGG | 0.313465 | 5.2:-5559176 | MS.gene09702:CDS |
| GCTAAGCTAATAAAGAATTC+TGG | 0.321705 | 5.2:+5555821 | None:intergenic |
| TCTGCAACATTCATGTCTTC+AGG | 0.329643 | 5.2:+5555749 | None:intergenic |
| GAGATAATTAGTTGGACTTC+TGG | 0.330854 | 5.2:-5558007 | MS.gene09702:CDS |
| TATTGGGTCAACGTTGGATT+TGG | 0.337581 | 5.2:-5559233 | MS.gene09702:CDS |
| TTTGGGGTTCAGCTGTGAAA+TGG | 0.348730 | 5.2:-5559159 | MS.gene09702:CDS |
| TTGGGGTTCAGCTGTGAAAT+GGG | 0.348739 | 5.2:-5559158 | MS.gene09702:CDS |
| TTGTTTCAAAATTTCAATCT+TGG | 0.350197 | 5.2:+5555621 | None:intergenic |
| TTGTAGAGGGATTGAACATT+TGG | 0.352124 | 5.2:-5559185 | MS.gene09702:CDS |
| TTTCGGAGTTTAGGAATATT+GGG | 0.354752 | 5.2:-5559249 | MS.gene09702:CDS |
| GTGGTTCTGTTTCGGAGTTT+AGG | 0.361159 | 5.2:-5559258 | MS.gene09702:CDS |
| GCCCTTCTTCTTGCCGTTCA+GGG | 0.361547 | 5.2:+5558038 | None:intergenic |
| TCCCCACCTTACCTGATGTT+TGG | 0.362089 | 5.2:-5555712 | MS.gene09702:CDS |
| TACCTTGAATTAATGCAAAT+GGG | 0.369067 | 5.2:+5555936 | None:intergenic |
| CGGCAAGAAGAAGGGCCTAA+TGG | 0.375581 | 5.2:-5558031 | MS.gene09702:CDS |
| AACAAGAAGTGGTTCTGTTT+CGG | 0.378933 | 5.2:-5559266 | MS.gene09702:CDS |
| GGCAAGAAGAAGGGCCTAAT+GGG | 0.381464 | 5.2:-5558030 | MS.gene09702:CDS |
| TCTTGTAAATCTATGTGTAC+TGG | 0.387269 | 5.2:-5559094 | MS.gene09702:CDS |
| ACTGAACCTCTTCTTAAGAT+TGG | 0.389494 | 5.2:+5555863 | None:intergenic |
| AGAGGTTCAGTTGCTTTAAT+CGG | 0.390617 | 5.2:-5555851 | MS.gene09702:CDS |
| GTACCTTGAATTAATGCAAA+TGG | 0.397660 | 5.2:+5555935 | None:intergenic |
| CTTCTGAGCAAGAAAGGAAC+GGG | 0.412860 | 5.2:+5555659 | None:intergenic |
| CAACTAATTATCTCCCCATT+AGG | 0.432956 | 5.2:+5558016 | None:intergenic |
| CCCTCACTGTGCTCCACACA+CGG | 0.436663 | 5.2:-5557387 | MS.gene09702:CDS |
| TCCACAGGAAGTTTATTGAA+TGG | 0.445167 | 5.2:+5555893 | None:intergenic |
| TCTGGTCTCATCTTTGGAAA+AGG | 0.445432 | 5.2:-5557989 | MS.gene09702:CDS |
| TTGATTCTTCTGAGCAAGAA+AGG | 0.445719 | 5.2:+5555653 | None:intergenic |
| TTTCCAGGGTATTATTGGAT+TGG | 0.446563 | 5.2:-5557646 | MS.gene09702:intron |
| TTGCCTATGCGCCATTGTGC+AGG | 0.450005 | 5.2:-5557344 | MS.gene09702:CDS |
| AGGCAACAGTTCTAGAATAT+AGG | 0.454860 | 5.2:+5557361 | None:intergenic |
| TTAACATTGTTCCAAACATC+AGG | 0.456879 | 5.2:+5555701 | None:intergenic |
| ATGTTGAAGGGTGTTGTAGA+GGG | 0.459948 | 5.2:-5559198 | MS.gene09702:CDS |
| CAGAGAGTCGAGGTCAATCA+TGG | 0.465585 | 5.2:-5557304 | MS.gene09702:CDS |
| GCCCCTGAACGGCAAGAAGA+AGG | 0.471860 | 5.2:-5558040 | MS.gene09702:CDS |
| GAGGCTTGTGGATCCAAATT+CGG | 0.472505 | 5.2:-5559022 | MS.gene09702:CDS |
| TGTGGGAATCGGGAGGCTTG+TGG | 0.475012 | 5.2:-5559034 | MS.gene09702:CDS |
| TCTATGTGTACTGGGAAAGA+TGG | 0.477675 | 5.2:-5559085 | MS.gene09702:CDS |
| GCTAATAAAGAATTCTGGAC+CGG | 0.479091 | 5.2:+5555826 | None:intergenic |
| CTTGTAAATCTATGTGTACT+GGG | 0.480690 | 5.2:-5559093 | MS.gene09702:CDS |
| CTCTCTGCAGTAACAAGAAG+TGG | 0.492856 | 5.2:-5559277 | MS.gene09702:CDS |
| TCAGTTGCTTTAATCGGTCC+CGG | 0.494464 | 5.2:-5555845 | MS.gene09702:CDS |
| CAGCCTGCACAATGGCGCAT+AGG | 0.495252 | 5.2:+5557341 | None:intergenic |
| CGGTTTAACAAAATGGTGCT+TGG | 0.500683 | 5.2:+5559352 | None:intergenic |
| CCCCTGAACGGCAAGAAGAA+GGG | 0.504864 | 5.2:-5558039 | MS.gene09702:CDS |
| ACCTTGTCTTTGTGATACTT+GGG | 0.507565 | 5.2:-5559062 | MS.gene09702:CDS |
| AATGTTGAAGGGTGTTGTAG+AGG | 0.532744 | 5.2:-5559199 | MS.gene09702:CDS |
| CCCTTCTTCTTGCCGTTCAG+GGG | 0.536761 | 5.2:+5558039 | None:intergenic |
| TTCCAAACATCAGGTAAGGT+GGG | 0.540243 | 5.2:+5555710 | None:intergenic |
| AGAATATAGGCAACCGTGTG+TGG | 0.540739 | 5.2:+5557374 | None:intergenic |
| GCTTAGCTGATCATTCAGAA+TGG | 0.548215 | 5.2:-5555805 | MS.gene09702:CDS |
| GTTGGTGAGAAGAATGTTGA+AGG | 0.552001 | 5.2:-5559211 | MS.gene09702:CDS |
| TGGGGTTCAGCTGTGAAATG+GGG | 0.556980 | 5.2:-5559157 | MS.gene09702:CDS |
| ATTGTTCCAAACATCAGGTA+AGG | 0.563809 | 5.2:+5555706 | None:intergenic |
| GTTCCAAACATCAGGTAAGG+TGG | 0.566546 | 5.2:+5555709 | None:intergenic |
| AAGATTGGACAATCTTCCAC+AGG | 0.568792 | 5.2:+5555878 | None:intergenic |
| GGGTCAACGTTGGATTTGGT+TGG | 0.581467 | 5.2:-5559229 | MS.gene09702:CDS |
| GATTGTCCAATCTTAAGAAG+AGG | 0.586819 | 5.2:-5555869 | MS.gene09702:CDS |
| CTAATAAAGAATTCTGGACC+GGG | 0.590349 | 5.2:+5555827 | None:intergenic |
| AGGAACGGGTTTCTTCAAAA+CGG | 0.591662 | 5.2:+5555673 | None:intergenic |
| TCTTCTGAGCAAGAAAGGAA+CGG | 0.595069 | 5.2:+5555658 | None:intergenic |
| CTAATGGGGAGATAATTAGT+TGG | 0.607611 | 5.2:-5558015 | MS.gene09702:CDS |
| ATTGAACATTTGGAGCTTTG+GGG | 0.612386 | 5.2:-5559175 | MS.gene09702:CDS |
| TAGGAATATTGGGTCAACGT+TGG | 0.612668 | 5.2:-5559239 | MS.gene09702:CDS |
| GTGTTGGTTAAAGAAACAAA+AGG | 0.617424 | 5.2:-5558071 | MS.gene09702:CDS |
| ACCATTCAATAAACTTCCTG+TGG | 0.619644 | 5.2:-5555894 | MS.gene09702:CDS |
| ACCTTGAATTAATGCAAATG+GGG | 0.619873 | 5.2:+5555937 | None:intergenic |
| CAAGGTACATTAGAAGCACA+AGG | 0.623038 | 5.2:-5555920 | MS.gene09702:CDS |
| TCCAAACATCAGGTAAGGTG+GGG | 0.625666 | 5.2:+5555711 | None:intergenic |
| AGGACAGCTTAGCCCCTGAA+CGG | 0.629415 | 5.2:-5558051 | MS.gene09702:CDS |
| GGTCAATCATGGGATTCAGA+AGG | 0.629530 | 5.2:-5557293 | MS.gene09702:CDS |
| ACCGTGTGTGGAGCACAGTG+AGG | 0.642211 | 5.2:+5557386 | None:intergenic |
| CACTTCTTGTTACTGCAGAG+AGG | 0.644712 | 5.2:+5559278 | None:intergenic |
| ATTGACCTCGACTCTCTGCA+CGG | 0.645340 | 5.2:+5557309 | None:intergenic |
| CCGTGTGTGGAGCACAGTGA+GGG | 0.647084 | 5.2:+5557387 | None:intergenic |
| AGAGAGTCGAGGTCAATCAT+GGG | 0.649366 | 5.2:-5557303 | MS.gene09702:CDS |
| ATTGGATTGGAAACTGAACA+CGG | 0.650566 | 5.2:-5557633 | MS.gene09702:CDS |
| TCTCATCTTTGGAAAAGGAG+AGG | 0.663105 | 5.2:-5557984 | MS.gene09702:intron |
| GCAAGAAGAAGGGCCTAATG+GGG | 0.681021 | 5.2:-5558029 | MS.gene09702:CDS |
| AAAATTGGCAGCCTGCACAA+TGG | 0.683556 | 5.2:+5557333 | None:intergenic |
| CCTTGAATTAATGCAAATGG+GGG | 0.686229 | 5.2:+5555938 | None:intergenic |
| TTGGTGAGAAGAATGTTGAA+GGG | 0.704145 | 5.2:-5559210 | MS.gene09702:CDS |
| ACCCAAGTATCACAAAGACA+AGG | 0.711556 | 5.2:+5559061 | None:intergenic |
| TTGTGGATCCAAATTCGGCG+AGG | 0.726847 | 5.2:-5559017 | MS.gene09702:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATGATAAAATTAGTT+CGG | - | chr5.2:5556637-5556656 | MS.gene09702:intron | 10.0% |
| !! | TGTAAATACAAAAAAAATAA+TGG | - | chr5.2:5558330-5558349 | MS.gene09702:intron | 10.0% |
| !!! | AATTTTTATTGGATTAAAAA+AGG | + | chr5.2:5558689-5558708 | None:intergenic | 10.0% |
| !!! | ATTTTTATTGGATTAAAAAA+GGG | + | chr5.2:5558688-5558707 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTGTATTTACATT+TGG | + | chr5.2:5558328-5558347 | None:intergenic | 10.0% |
| !!! | TTTAATTTAATTCAACAATT+TGG | - | chr5.2:5557233-5557252 | MS.gene09702:intron | 10.0% |
| !! | ATGTTAGTAAATTAAACTAA+TGG | - | chr5.2:5556739-5556758 | MS.gene09702:intron | 15.0% |
| !! | TGTTAGTAAATTAAACTAAT+GGG | - | chr5.2:5556740-5556759 | MS.gene09702:intron | 15.0% |
| !!! | AATGAACTTATTTTTTAAAC+CGG | + | chr5.2:5556361-5556380 | None:intergenic | 15.0% |
| !!! | ATTCTATTTTAAAATTGACT+TGG | - | chr5.2:5557077-5557096 | MS.gene09702:intron | 15.0% |
| !!! | CATATCTTACATTTTTTATA+TGG | + | chr5.2:5557743-5557762 | None:intergenic | 15.0% |
| !!! | TTTGTAATCTCAATTTTTAT+TGG | + | chr5.2:5558700-5558719 | None:intergenic | 15.0% |
| !! | AAAAAATAAGTCTGATTTAG+TGG | + | chr5.2:5556681-5556700 | None:intergenic | 20.0% |
| !! | AAGAAAAAATAGTCCTAAAA+GGG | + | chr5.2:5558558-5558577 | None:intergenic | 20.0% |
| !! | ACAGTTAAATGAATCTAAAA+TGG | + | chr5.2:5557978-5557997 | None:intergenic | 20.0% |
| !! | TAACTGTATGAATTATTGTT+AGG | - | chr5.2:5557991-5558010 | MS.gene09702:CDS | 20.0% |
| !! | TACAACTATTAATGCAATTA+TGG | - | chr5.2:5557783-5557802 | MS.gene09702:intron | 20.0% |
| !!! | ATCTATATGTGCTATTTTTT+TGG | - | chr5.2:5557919-5557938 | MS.gene09702:intron | 20.0% |
| !!! | GAATTTTATCAACTTATGAA+AGG | - | chr5.2:5557297-5557316 | MS.gene09702:CDS | 20.0% |
| !!! | TACAATAAAAAATTTGCTTC+CGG | - | chr5.2:5556339-5556358 | MS.gene09702:intron | 20.0% |
| ! | AAACCATAATTATCATGTGA+CGG | + | chr5.2:5557533-5557552 | None:intergenic | 25.0% |
| ! | AACAGAAGAAACATGTAATT+TGG | + | chr5.2:5557194-5557213 | None:intergenic | 25.0% |
| ! | AATCAAACGGTTTAACAAAA+TGG | + | chr5.2:5555665-5555684 | None:intergenic | 25.0% |
| ! | ACAAACATTATTGTTCACTA+TGG | + | chr5.2:5558985-5559004 | None:intergenic | 25.0% |
| ! | ACACAAAAAGAAGAATCAAA+CGG | + | chr5.2:5555678-5555697 | None:intergenic | 25.0% |
| ! | ACTATTAATGCAATTATGGT+AGG | - | chr5.2:5557787-5557806 | MS.gene09702:intron | 25.0% |
| ! | ATCTTTCACTGATAATACAA+AGG | - | chr5.2:5558138-5558157 | MS.gene09702:intron | 25.0% |
| ! | ATCTTTCACTGATAATACAA+AGG | + | chr5.2:5558157-5558138 | None:intergenic | 25.0% |
| ! | ATTCTCATATACTCTATATG+AGG | + | chr5.2:5558609-5558628 | None:intergenic | 25.0% |
| ! | CATGTAATTTGGAGATAATT+AGG | + | chr5.2:5557183-5557202 | None:intergenic | 25.0% |
| ! | CTCAACAAAACAATTCATAA+TGG | + | chr5.2:5557899-5557918 | None:intergenic | 25.0% |
| ! | GAACTTAATAACTTTCTTTC+AGG | + | chr5.2:5557140-5557159 | None:intergenic | 25.0% |
| ! | GAAGAAAAAATAGTCCTAAA+AGG | + | chr5.2:5558559-5558578 | None:intergenic | 25.0% |
| ! | GTATTATCAGTGAAAGATTT+GGG | + | chr5.2:5558136-5558155 | None:intergenic | 25.0% |
| ! | TACCTTGAATTAATGCAAAT+GGG | + | chr5.2:5559074-5559093 | None:intergenic | 25.0% |
| ! | TCAAAAAAATGTATTCGCAA+AGG | - | chr5.2:5558778-5558797 | MS.gene09702:intron | 25.0% |
| ! | TCATCATTACTAAAGAAACA+TGG | + | chr5.2:5557497-5557516 | None:intergenic | 25.0% |
| ! | TGAAATAATCACAATTGACA+CGG | + | chr5.2:5556119-5556138 | None:intergenic | 25.0% |
| ! | TGTATAATAGTACTTTGTAG+TGG | - | chr5.2:5559002-5559021 | MS.gene09702:intron | 25.0% |
| ! | TGTATTATCAGTGAAAGATT+AGG | - | chr5.2:5558031-5558050 | MS.gene09702:CDS | 25.0% |
| ! | TGTATTATCAGTGAAAGATT+TGG | + | chr5.2:5558050-5558031 | None:intergenic | 25.0% |
| !! | AAACAAGAATACACAGTTTT+TGG | - | chr5.2:5559225-5559244 | MS.gene09702:CDS | 25.0% |
| !! | AAAGAAACATGGAAAGTATA+AGG | + | chr5.2:5557486-5557505 | None:intergenic | 25.0% |
| !! | CAAGATCAACTTTTTGTTAA+AGG | + | chr5.2:5556895-5556914 | None:intergenic | 25.0% |
| !! | CATATTTTTCTTGCTTTCAT+AGG | - | chr5.2:5557945-5557964 | MS.gene09702:intron | 25.0% |
| !! | TGTTTTCTTGTACATTCTTT+TGG | - | chr5.2:5556791-5556810 | MS.gene09702:intron | 25.0% |
| !! | TTAAATGAATCTAAAATGGC+TGG | + | chr5.2:5557974-5557993 | None:intergenic | 25.0% |
| !! | TTTTCTTTACTCGTTTGAAT+CGG | - | chr5.2:5558246-5558265 | MS.gene09702:intron | 25.0% |
| !! | TTTTTGAACAATGTTCCTTT+GGG | + | chr5.2:5558765-5558784 | None:intergenic | 25.0% |
| !!! | AATTCATCTGTTTTTTTTCC+AGG | - | chr5.2:5557346-5557365 | MS.gene09702:CDS | 25.0% |
| !!! | ATTCATCTGTTTTTTTTCCA+GGG | - | chr5.2:5557347-5557366 | MS.gene09702:CDS | 25.0% |
| !!! | TAAATGAGTTCTTATTTTGC+AGG | - | chr5.2:5559035-5559054 | MS.gene09702:CDS | 25.0% |
| !!! | TTAGGACTATTTTTTCTTCA+CGG | - | chr5.2:5558560-5558579 | MS.gene09702:intron | 25.0% |
| !!! | TTATTGTTTGTTGTGTGAAT+CGG | - | chr5.2:5556465-5556484 | MS.gene09702:intron | 25.0% |
| !!! | TTTTTTGAACAATGTTCCTT+TGG | + | chr5.2:5558766-5558785 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCCAGGGTATTAT+TGG | - | chr5.2:5557356-5557375 | MS.gene09702:CDS | 25.0% |
| AAAACTACACCAATTCCAAA+AGG | + | chr5.2:5556174-5556193 | None:intergenic | 30.0% | |
| AAAGATTAGGTAATGACAAG+GGG | - | chr5.2:5558044-5558063 | MS.gene09702:CDS | 30.0% | |
| ACCTTGAATTAATGCAAATG+GGG | + | chr5.2:5559073-5559092 | None:intergenic | 30.0% | |
| AGGAAATAATTATCCAGTGA+AGG | + | chr5.2:5557571-5557590 | None:intergenic | 30.0% | |
| ATCAAAACATGCAAAGTATG+AGG | + | chr5.2:5557591-5557610 | None:intergenic | 30.0% | |
| CTTGTAAATCTATGTGTACT+GGG | - | chr5.2:5555914-5555933 | MS.gene09702:CDS | 30.0% | |
| GAAAGATTAGGTAATGACAA+GGG | - | chr5.2:5558043-5558062 | MS.gene09702:CDS | 30.0% | |
| GCTAAGCTAATAAAGAATTC+TGG | + | chr5.2:5559189-5559208 | None:intergenic | 30.0% | |
| GTACCTTGAATTAATGCAAA+TGG | + | chr5.2:5559075-5559094 | None:intergenic | 30.0% | |
| TAAATCAGTTCACCTTGATT+TGG | + | chr5.2:5558367-5558386 | None:intergenic | 30.0% | |
| TACGGGGTAATATTGTAATA+TGG | - | chr5.2:5558075-5558094 | MS.gene09702:intron | 30.0% | |
| TACTGCAATAACCTAACTAA+TGG | + | chr5.2:5557844-5557863 | None:intergenic | 30.0% | |
| TATTTCCATATTCGCAATCT+CGG | - | chr5.2:5558814-5558833 | MS.gene09702:intron | 30.0% | |
| TCATAAAATGTCTATTGCTG+AGG | + | chr5.2:5558477-5558496 | None:intergenic | 30.0% | |
| TCTTGTAAATCTATGTGTAC+TGG | - | chr5.2:5555913-5555932 | MS.gene09702:CDS | 30.0% | |
| TGAAAGATTAGGTAATGACA+AGG | - | chr5.2:5558042-5558061 | MS.gene09702:CDS | 30.0% | |
| TTAACATTGTTCCAAACATC+AGG | + | chr5.2:5559309-5559328 | None:intergenic | 30.0% | |
| TTGAATACAATGAATGTACC+TGG | + | chr5.2:5558659-5558678 | None:intergenic | 30.0% | |
| TTTATGATGTATTGCACAGT+TGG | - | chr5.2:5557275-5557294 | MS.gene09702:intron | 30.0% | |
| TTTCATATTTGAACCTTCAC+TGG | - | chr5.2:5557555-5557574 | MS.gene09702:intron | 30.0% | |
| TTTCGGAGTTTAGGAATATT+GGG | - | chr5.2:5555758-5555777 | MS.gene09702:CDS | 30.0% | |
| TTTCTTTACTCGTTTGAATC+GGG | - | chr5.2:5558247-5558266 | MS.gene09702:intron | 30.0% | |
| ! | AACAATGAACACACGATTTT+TGG | + | chr5.2:5558217-5558236 | None:intergenic | 30.0% |
| ! | ACATTTTATGATCGAGAACA+TGG | - | chr5.2:5558486-5558505 | MS.gene09702:intron | 30.0% |
| ! | CTCTGGATTTTCATTAATCA+AGG | - | chr5.2:5558410-5558429 | MS.gene09702:intron | 30.0% |
| ! | TGCATGTTGTAGTACATTTT+AGG | - | chr5.2:5556386-5556405 | MS.gene09702:intron | 30.0% |
| ! | TTAGAAAACACGGGTATTTT+TGG | + | chr5.2:5558515-5558534 | None:intergenic | 30.0% |
| !! | GTGTTGGTTAAAGAAACAAA+AGG | - | chr5.2:5556936-5556955 | MS.gene09702:intron | 30.0% |
| !! | TATTGTTTGTTGTGTGAATC+GGG | - | chr5.2:5556466-5556485 | MS.gene09702:intron | 30.0% |
| !!! | CATTTTAGCTTAGAAAACAC+GGG | + | chr5.2:5558524-5558543 | None:intergenic | 30.0% |
| !!! | CCATTTTAGCTTAGAAAACA+CGG | + | chr5.2:5558525-5558544 | None:intergenic | 30.0% |
| !!! | CGATTTTTGGTAATGAAGTT+TGG | + | chr5.2:5558204-5558223 | None:intergenic | 30.0% |
| !!! | TTTGTGTGTTTTGTTTCTTG+CGG | - | chr5.2:5555691-5555710 | MS.gene09702:CDS | 30.0% |
| AAGATTAGGTAATGACAAGG+GGG | - | chr5.2:5558045-5558064 | MS.gene09702:CDS | 35.0% | |
| ACCATTCAATAAACTTCCTG+TGG | - | chr5.2:5559113-5559132 | MS.gene09702:CDS | 35.0% | |
| ACCTTGTCTTTGTGATACTT+GGG | - | chr5.2:5555945-5555964 | MS.gene09702:CDS | 35.0% | |
| ACTGAACCTCTTCTTAAGAT+TGG | + | chr5.2:5559147-5559166 | None:intergenic | 35.0% | |
| AGAAAGACTGAGCTTAAAAC+AGG | + | chr5.2:5557868-5557887 | None:intergenic | 35.0% | |
| AGTCAGAGATGTTGTGAAAT+TGG | - | chr5.2:5558178-5558197 | MS.gene09702:intron | 35.0% | |
| ATGTGATCTTGATCTAGTCT+AGG | + | chr5.2:5556244-5556263 | None:intergenic | 35.0% | |
| ATTGTTCCAAACATCAGGTA+AGG | + | chr5.2:5559304-5559323 | None:intergenic | 35.0% | |
| CAACTAATTATCTCCCCATT+AGG | + | chr5.2:5556994-5557013 | None:intergenic | 35.0% | |
| CCTTGAATTAATGCAAATGG+GGG | + | chr5.2:5559072-5559091 | None:intergenic | 35.0% | |
| CTAATAAAGAATTCTGGACC+GGG | + | chr5.2:5559183-5559202 | None:intergenic | 35.0% | |
| CTAATGGGGAGATAATTAGT+TGG | - | chr5.2:5556992-5557011 | MS.gene09702:intron | 35.0% | |
| CTCTATATGAGGACAAAGAA+AGG | + | chr5.2:5558598-5558617 | None:intergenic | 35.0% | |
| GAGATAATTAGTTGGACTTC+TGG | - | chr5.2:5557000-5557019 | MS.gene09702:intron | 35.0% | |
| GATCCGTCACATGATAATTA+TGG | - | chr5.2:5557527-5557546 | MS.gene09702:intron | 35.0% | |
| GATTGTCCAATCTTAAGAAG+AGG | - | chr5.2:5559138-5559157 | MS.gene09702:CDS | 35.0% | |
| GCAAATAGAATCAAAGTCTC+TGG | - | chr5.2:5558393-5558412 | MS.gene09702:intron | 35.0% | |
| GCTAATAAAGAATTCTGGAC+CGG | + | chr5.2:5559184-5559203 | None:intergenic | 35.0% | |
| GCTCATATTCACTGTTAAGT+GGG | + | chr5.2:5558963-5558982 | None:intergenic | 35.0% | |
| GTTTCGGAGTTTAGGAATAT+TGG | - | chr5.2:5555757-5555776 | MS.gene09702:CDS | 35.0% | |
| TATAGAGTTCATCTGAGTTC+AGG | - | chr5.2:5556829-5556848 | MS.gene09702:intron | 35.0% | |
| TCCACAGGAAGTTTATTGAA+TGG | + | chr5.2:5559117-5559136 | None:intergenic | 35.0% | |
| TGGGAATGATTTCACTGTAT+TGG | - | chr5.2:5556759-5556778 | MS.gene09702:intron | 35.0% | |
| TTAAATTCCCCCTTCCATTT+GGG | - | chr5.2:5556143-5556162 | MS.gene09702:intron | 35.0% | |
| TTGATTCTTCTGAGCAAGAA+AGG | + | chr5.2:5559357-5559376 | None:intergenic | 35.0% | |
| TTGGTGAGAAGAATGTTGAA+GGG | - | chr5.2:5555797-5555816 | MS.gene09702:CDS | 35.0% | |
| TTGTAGAGGGATTGAACATT+TGG | - | chr5.2:5555822-5555841 | MS.gene09702:CDS | 35.0% | |
| TTTAAATTCCCCCTTCCATT+TGG | - | chr5.2:5556142-5556161 | MS.gene09702:intron | 35.0% | |
| TTTCCAATCCAATAATACCC+TGG | + | chr5.2:5557367-5557386 | None:intergenic | 35.0% | |
| ! | AACAAGAAGTGGTTCTGTTT+CGG | - | chr5.2:5555741-5555760 | MS.gene09702:CDS | 35.0% |
| ! | AGAGGTTCAGTTGCTTTAAT+CGG | - | chr5.2:5559156-5559175 | MS.gene09702:CDS | 35.0% |
| ! | ATTGAACATTTGGAGCTTTG+GGG | - | chr5.2:5555832-5555851 | MS.gene09702:CDS | 35.0% |
| ! | ATTGGATTGGAAACTGAACA+CGG | - | chr5.2:5557374-5557393 | MS.gene09702:CDS | 35.0% |
| ! | CCGTGTTTTCTAAGCTAAAA+TGG | - | chr5.2:5558522-5558541 | MS.gene09702:intron | 35.0% |
| ! | GATTGAACATTTGGAGCTTT+GGG | - | chr5.2:5555831-5555850 | MS.gene09702:CDS | 35.0% |
| ! | GTTCGGTTTTGCTTATACTT+AGG | - | chr5.2:5556654-5556673 | MS.gene09702:intron | 35.0% |
| ! | TCAAACTTTTGTTGCAGTGT+TGG | - | chr5.2:5556920-5556939 | MS.gene09702:intron | 35.0% |
| ! | TGATTTTGTGTTTGTGAACC+AGG | + | chr5.2:5556605-5556624 | None:intergenic | 35.0% |
| ! | TGGATTTCAATGTCCCTTTT+AGG | - | chr5.2:5558542-5558561 | MS.gene09702:intron | 35.0% |
| ! | TTTCCAGGGTATTATTGGAT+TGG | - | chr5.2:5557361-5557380 | MS.gene09702:CDS | 35.0% |
| !! | AGGCAACAGTTCTAGAATAT+AGG | + | chr5.2:5557649-5557668 | None:intergenic | 35.0% |
| AAAGGATAGACCCAAATGGA+AGG | + | chr5.2:5556156-5556175 | None:intergenic | 40.0% | |
| AAGATTGGACAATCTTCCAC+AGG | + | chr5.2:5559132-5559151 | None:intergenic | 40.0% | |
| AAGGAGAGGTAACTGAAGTT+TGG | - | chr5.2:5557037-5557056 | MS.gene09702:intron | 40.0% | |
| AAGGATAGACCCAAATGGAA+GGG | + | chr5.2:5556155-5556174 | None:intergenic | 40.0% | |
| ACCCAAGTATCACAAAGACA+AGG | + | chr5.2:5555949-5555968 | None:intergenic | 40.0% | |
| CACTCTCATTGCCATTAGTT+AGG | - | chr5.2:5557830-5557849 | MS.gene09702:intron | 40.0% | |
| CATGTTAACGATACAAAGCC+AGG | - | chr5.2:5558638-5558657 | MS.gene09702:intron | 40.0% | |
| CCCCCATTTGCATTAATTCA+AGG | - | chr5.2:5559069-5559088 | MS.gene09702:CDS | 40.0% | |
| CGGTTTAACAAAATGGTGCT+TGG | + | chr5.2:5555658-5555677 | None:intergenic | 40.0% | |
| GAAACCATCACACCAAATCA+AGG | - | chr5.2:5558352-5558371 | MS.gene09702:intron | 40.0% | |
| GACCTTGTCTTTGTGATACT+TGG | - | chr5.2:5555944-5555963 | MS.gene09702:CDS | 40.0% | |
| GCTTAGCTGATCATTCAGAA+TGG | - | chr5.2:5559202-5559221 | MS.gene09702:CDS | 40.0% | |
| GGCTCATATTCACTGTTAAG+TGG | + | chr5.2:5558964-5558983 | None:intergenic | 40.0% | |
| TACATGTGTTTGTGTCTGTG+TGG | + | chr5.2:5556034-5556053 | None:intergenic | 40.0% | |
| TAGGAATATTGGGTCAACGT+TGG | - | chr5.2:5555768-5555787 | MS.gene09702:CDS | 40.0% | |
| TATTGGGTCAACGTTGGATT+TGG | - | chr5.2:5555774-5555793 | MS.gene09702:CDS | 40.0% | |
| TCCAAAAGGATAGACCCAAA+TGG | + | chr5.2:5556160-5556179 | None:intergenic | 40.0% | |
| TCCAACCTGAGATACTACTT+CGG | + | chr5.2:5556718-5556737 | None:intergenic | 40.0% | |
| TCTATGTGTACTGGGAAAGA+TGG | - | chr5.2:5555922-5555941 | MS.gene09702:CDS | 40.0% | |
| TCTGCAACATTCATGTCTTC+AGG | + | chr5.2:5559261-5559280 | None:intergenic | 40.0% | |
| TCTTCTGAGCAAGAAAGGAA+CGG | + | chr5.2:5559352-5559371 | None:intergenic | 40.0% | |
| TGGGAATACTACCATGCAAA+TGG | + | chr5.2:5558746-5558765 | None:intergenic | 40.0% | |
| TTCCAAACATCAGGTAAGGT+GGG | + | chr5.2:5559300-5559319 | None:intergenic | 40.0% | |
| TTGCATGGTAGTATTCCCAA+AGG | - | chr5.2:5558747-5558766 | MS.gene09702:intron | 40.0% | |
| TTGCTAATCCAAGCCTAAAC+AGG | + | chr5.2:5556418-5556437 | None:intergenic | 40.0% | |
| ! | AGGAACGGGTTTCTTCAAAA+CGG | + | chr5.2:5559337-5559356 | None:intergenic | 40.0% |
| ! | CAAGGTACATTAGAAGCACA+AGG | - | chr5.2:5559087-5559106 | MS.gene09702:CDS | 40.0% |
| ! | GGATTGAACATTTGGAGCTT+TGG | - | chr5.2:5555830-5555849 | MS.gene09702:CDS | 40.0% |
| ! | GGGTTACAAAAGTGCAAACA+TGG | + | chr5.2:5558441-5558460 | None:intergenic | 40.0% |
| ! | GTGATACTTGGGTGTTTTGT+GGG | - | chr5.2:5555956-5555975 | MS.gene09702:intron | 40.0% |
| ! | GTTGGTGAGAAGAATGTTGA+AGG | - | chr5.2:5555796-5555815 | MS.gene09702:CDS | 40.0% |
| ! | TCCATTTGGGTCTATCCTTT+TGG | - | chr5.2:5556156-5556175 | MS.gene09702:intron | 40.0% |
| ! | TCTCATCTTTGGAAAAGGAG+AGG | - | chr5.2:5557023-5557042 | MS.gene09702:intron | 40.0% |
| ! | TCTGGTCTCATCTTTGGAAA+AGG | - | chr5.2:5557018-5557037 | MS.gene09702:intron | 40.0% |
| ! | TGTGATACTTGGGTGTTTTG+TGG | - | chr5.2:5555955-5555974 | MS.gene09702:intron | 40.0% |
| ! | TGTTTGCACTTTTGTAACCC+AGG | - | chr5.2:5558441-5558460 | MS.gene09702:intron | 40.0% |
| ! | TTCTGTTGATGCCATTTGCA+TGG | - | chr5.2:5558732-5558751 | MS.gene09702:intron | 40.0% |
| !! | AATGTTGAAGGGTGTTGTAG+AGG | - | chr5.2:5555808-5555827 | MS.gene09702:CDS | 40.0% |
| !! | ATGTTGAAGGGTGTTGTAGA+GGG | - | chr5.2:5555809-5555828 | MS.gene09702:CDS | 40.0% |
| !! | TTCACCTTGATTTGGTGTGA+TGG | + | chr5.2:5558359-5558378 | None:intergenic | 40.0% |
| !! | TTTTAGGAACGTGCCTGTTT+AGG | - | chr5.2:5556402-5556421 | MS.gene09702:intron | 40.0% |
| !!! | CTTATTTTGCAGGCTGGTTT+TGG | - | chr5.2:5559045-5559064 | MS.gene09702:CDS | 40.0% |
| !!! | GTGTTTTGTTTCTTGCGGTT+TGG | - | chr5.2:5555696-5555715 | MS.gene09702:CDS | 40.0% |
| !!! | TGAGTTCTTATTTTGCAGGC+TGG | - | chr5.2:5559039-5559058 | MS.gene09702:CDS | 40.0% |
| !!! | TGGGTCTATCCTTTTGGAAT+TGG | - | chr5.2:5556162-5556181 | MS.gene09702:intron | 40.0% |
| AAAATTGGCAGCCTGCACAA+TGG | + | chr5.2:5557677-5557696 | None:intergenic | 45.0% | |
| ACCGAAGTAGTATCTCAGGT+TGG | - | chr5.2:5556714-5556733 | MS.gene09702:intron | 45.0% | |
| AGAATATAGGCAACCGTGTG+TGG | + | chr5.2:5557636-5557655 | None:intergenic | 45.0% | |
| AGAGAGTCGAGGTCAATCAT+GGG | - | chr5.2:5557704-5557723 | MS.gene09702:intron | 45.0% | |
| AGGATAGACCCAAATGGAAG+GGG | + | chr5.2:5556154-5556173 | None:intergenic | 45.0% | |
| ATCACAATTGACACGGACAC+TGG | + | chr5.2:5556112-5556131 | None:intergenic | 45.0% | |
| CACTTCTTGTTACTGCAGAG+AGG | + | chr5.2:5555732-5555751 | None:intergenic | 45.0% | |
| CTCTCTGCAGTAACAAGAAG+TGG | - | chr5.2:5555730-5555749 | MS.gene09702:CDS | 45.0% | |
| CTGTACCGAGATTGCGAATA+TGG | + | chr5.2:5558822-5558841 | None:intergenic | 45.0% | |
| CTTCTGAGCAAGAAAGGAAC+GGG | + | chr5.2:5559351-5559370 | None:intergenic | 45.0% | |
| GACTCTCTGCACGGTAAAAT+TGG | + | chr5.2:5557692-5557711 | None:intergenic | 45.0% | |
| GAGGCTTGTGGATCCAAATT+CGG | - | chr5.2:5555985-5556004 | MS.gene09702:intron | 45.0% | |
| GGTCAATCATGGGATTCAGA+AGG | - | chr5.2:5557714-5557733 | MS.gene09702:intron | 45.0% | |
| GTGTCTGTGTGGACAAAAAC+AGG | + | chr5.2:5556023-5556042 | None:intergenic | 45.0% | |
| GTTCCAAACATCAGGTAAGG+TGG | + | chr5.2:5559301-5559320 | None:intergenic | 45.0% | |
| TAAGTGGGAAGAGTCTTCAG+TGG | + | chr5.2:5558948-5558967 | None:intergenic | 45.0% | |
| TCAGACCGAAGTAGTATCTC+AGG | - | chr5.2:5556710-5556729 | MS.gene09702:intron | 45.0% | |
| TCCAAACATCAGGTAAGGTG+GGG | + | chr5.2:5559299-5559318 | None:intergenic | 45.0% | |
| TGACAAGGGGGAACTGTTTA+CGG | - | chr5.2:5558057-5558076 | MS.gene09702:CDS | 45.0% | |
| TGGACTTCTGGTCTCATCTT+TGG | - | chr5.2:5557012-5557031 | MS.gene09702:intron | 45.0% | |
| TTGGGGTTCAGCTGTGAAAT+GGG | - | chr5.2:5555849-5555868 | MS.gene09702:CDS | 45.0% | |
| ! | CTTGGGTGTTTTGTGGGAAT+CGG | - | chr5.2:5555962-5555981 | MS.gene09702:intron | 45.0% |
| ! | GTGGTTCTGTTTCGGAGTTT+AGG | - | chr5.2:5555749-5555768 | MS.gene09702:CDS | 45.0% |
| ! | TCAGTTGCTTTAATCGGTCC+CGG | - | chr5.2:5559162-5559181 | MS.gene09702:CDS | 45.0% |
| ! | TTGGGTGTTTTGTGGGAATC+GGG | - | chr5.2:5555963-5555982 | MS.gene09702:intron | 45.0% |
| ! | TTTGGGGTTCAGCTGTGAAA+TGG | - | chr5.2:5555848-5555867 | MS.gene09702:CDS | 45.0% |
| !!! | ATCATTTTATTTTATTTTTT+GGG | - | chr5.2:5556855-5556874 | MS.gene09702:intron | 5.0% |
| !!! | TATCATTTTATTTTATTTTT+TGG | - | chr5.2:5556854-5556873 | MS.gene09702:intron | 5.0% |
| AAGAGCTTTGCTCCCCATTC+TGG | - | chr5.2:5556532-5556551 | MS.gene09702:intron | 50.0% | |
| AAGCTCTTTGCGGTCATACC+TGG | + | chr5.2:5556520-5556539 | None:intergenic | 50.0% | |
| ACAAGGGGGAACTGTTTACG+GGG | - | chr5.2:5558059-5558078 | MS.gene09702:CDS | 50.0% | |
| ATGGGGAGCAAAGCTCTTTG+CGG | + | chr5.2:5556530-5556549 | None:intergenic | 50.0% | |
| ATTGACCTCGACTCTCTGCA+CGG | + | chr5.2:5557701-5557720 | None:intergenic | 50.0% | |
| CAGAGAGTCGAGGTCAATCA+TGG | - | chr5.2:5557703-5557722 | MS.gene09702:intron | 50.0% | |
| CAGTTGCATGCAGAGATACC+TGG | - | chr5.2:5556584-5556603 | MS.gene09702:intron | 50.0% | |
| GACAAGGGGGAACTGTTTAC+GGG | - | chr5.2:5558058-5558077 | MS.gene09702:CDS | 50.0% | |
| GCAAGAAGAAGGGCCTAATG+GGG | - | chr5.2:5556978-5556997 | MS.gene09702:intron | 50.0% | |
| GGATAGACCCAAATGGAAGG+GGG | + | chr5.2:5556153-5556172 | None:intergenic | 50.0% | |
| GGCAAGAAGAAGGGCCTAAT+GGG | - | chr5.2:5556977-5556996 | MS.gene09702:intron | 50.0% | |
| GTAACGTACCTCGCCGAATT+TGG | + | chr5.2:5556001-5556020 | None:intergenic | 50.0% | |
| TCCCCACCTTACCTGATGTT+TGG | - | chr5.2:5559295-5559314 | MS.gene09702:CDS | 50.0% | |
| TGGGGTTCAGCTGTGAAATG+GGG | - | chr5.2:5555850-5555869 | MS.gene09702:CDS | 50.0% | |
| TTGTGGATCCAAATTCGGCG+AGG | - | chr5.2:5555990-5556009 | MS.gene09702:intron | 50.0% | |
| ! | GCTGAGGCATCAAATCTCCT+GGG | + | chr5.2:5558461-5558480 | None:intergenic | 50.0% |
| ! | GGGTCAACGTTGGATTTGGT+TGG | - | chr5.2:5555778-5555797 | MS.gene09702:CDS | 50.0% |
| ! | TGCTGAGGCATCAAATCTCC+TGG | + | chr5.2:5558462-5558481 | None:intergenic | 50.0% |
| ! | TTTTACCGTGCAGAGAGTCG+AGG | - | chr5.2:5557693-5557712 | MS.gene09702:intron | 50.0% |
| !! | CTGGCTCGAGAGATTAGTCT+CGG | + | chr5.2:5556501-5556520 | None:intergenic | 50.0% |
| AGAGATTGATCCCTCGAGCC+GGG | + | chr5.2:5556563-5556582 | None:intergenic | 55.0% | |
| AGGACAGCTTAGCCCCTGAA+CGG | - | chr5.2:5556956-5556975 | MS.gene09702:intron | 55.0% | |
| CAGAGATTGATCCCTCGAGC+CGG | + | chr5.2:5556564-5556583 | None:intergenic | 55.0% | |
| CCCCTGAACGGCAAGAAGAA+GGG | - | chr5.2:5556968-5556987 | MS.gene09702:intron | 55.0% | |
| CCCTTCTTCTTGCCGTTCAG+GGG | + | chr5.2:5556971-5556990 | None:intergenic | 55.0% | |
| CGAGACTAATCTCTCGAGCC+AGG | - | chr5.2:5556499-5556518 | MS.gene09702:intron | 55.0% | |
| CGGCAAGAAGAAGGGCCTAA+TGG | - | chr5.2:5556976-5556995 | MS.gene09702:intron | 55.0% | |
| GCCCTTCTTCTTGCCGTTCA+GGG | + | chr5.2:5556972-5556991 | None:intergenic | 55.0% | |
| GGAACGTGCCTGTTTAGGCT+TGG | - | chr5.2:5556407-5556426 | MS.gene09702:intron | 55.0% | |
| TTGCCTATGCGCCATTGTGC+AGG | - | chr5.2:5557663-5557682 | MS.gene09702:intron | 55.0% | |
| ! | GGTGTTTTGTGGGAATCGGG+AGG | - | chr5.2:5555966-5555985 | MS.gene09702:intron | 55.0% |
| !! | CGAGAGATTAGTCTCGGCAG+AGG | + | chr5.2:5556495-5556514 | None:intergenic | 55.0% |
| ACCGTGTGTGGAGCACAGTG+AGG | + | chr5.2:5557624-5557643 | None:intergenic | 60.0% | |
| AGCCGGGTAGGACCAGAATG+GGG | + | chr5.2:5556547-5556566 | None:intergenic | 60.0% | |
| ATTGATCCCTCGAGCCGGGT+AGG | + | chr5.2:5556559-5556578 | None:intergenic | 60.0% | |
| CAGCCTGCACAATGGCGCAT+AGG | + | chr5.2:5557669-5557688 | None:intergenic | 60.0% | |
| CCCTCACTGTGCTCCACACA+CGG | - | chr5.2:5557620-5557639 | MS.gene09702:CDS | 60.0% | |
| CCGTGTGTGGAGCACAGTGA+GGG | + | chr5.2:5557623-5557642 | None:intergenic | 60.0% | |
| CTCCCCATTCTGGTCCTACC+CGG | - | chr5.2:5556542-5556561 | MS.gene09702:intron | 60.0% | |
| GAGCCGGGTAGGACCAGAAT+GGG | + | chr5.2:5556548-5556567 | None:intergenic | 60.0% | |
| GCCCCTGAACGGCAAGAAGA+AGG | - | chr5.2:5556967-5556986 | MS.gene09702:intron | 60.0% | |
| GGCCCTTCTTCTTGCCGTTC+AGG | + | chr5.2:5556973-5556992 | None:intergenic | 60.0% | |
| TGTGGGAATCGGGAGGCTTG+TGG | - | chr5.2:5555973-5555992 | MS.gene09702:intron | 60.0% | |
| CGAGCCGGGTAGGACCAGAA+TGG | + | chr5.2:5556549-5556568 | None:intergenic | 65.0% | |
| ! | TCTGGTCCTACCCGGCTCGA+GGG | - | chr5.2:5556550-5556569 | MS.gene09702:intron | 65.0% |
| ! | TTCTGGTCCTACCCGGCTCG+AGG | - | chr5.2:5556549-5556568 | MS.gene09702:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 5555634 | 5559395 | 5555634 | ID=MS.gene09702 |
| chr5.2 | mRNA | 5555634 | 5559395 | 5555634 | ID=MS.gene09702.t1;Parent=MS.gene09702 |
| chr5.2 | exon | 5559018 | 5559395 | 5559018 | ID=MS.gene09702.t1.exon1;Parent=MS.gene09702.t1 |
| chr5.2 | CDS | 5559018 | 5559395 | 5559018 | ID=cds.MS.gene09702.t1;Parent=MS.gene09702.t1 |
| chr5.2 | exon | 5557985 | 5558092 | 5557985 | ID=MS.gene09702.t1.exon2;Parent=MS.gene09702.t1 |
| chr5.2 | CDS | 5557985 | 5558092 | 5557985 | ID=cds.MS.gene09702.t1;Parent=MS.gene09702.t1 |
| chr5.2 | exon | 5557617 | 5557661 | 5557617 | ID=MS.gene09702.t1.exon3;Parent=MS.gene09702.t1 |
| chr5.2 | CDS | 5557617 | 5557661 | 5557617 | ID=cds.MS.gene09702.t1;Parent=MS.gene09702.t1 |
| chr5.2 | exon | 5557277 | 5557414 | 5557277 | ID=MS.gene09702.t1.exon4;Parent=MS.gene09702.t1 |
| chr5.2 | CDS | 5557277 | 5557414 | 5557277 | ID=cds.MS.gene09702.t1;Parent=MS.gene09702.t1 |
| chr5.2 | exon | 5555634 | 5555972 | 5555634 | ID=MS.gene09702.t1.exon5;Parent=MS.gene09702.t1 |
| chr5.2 | CDS | 5555634 | 5555972 | 5555634 | ID=cds.MS.gene09702.t1;Parent=MS.gene09702.t1 |
| Gene Sequence |
| Protein sequence |
