Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09816.t1 | XP_004493910.1 | 90.6 | 405 | 36 | 2 | 1 | 403 | 36 | 440 | 1.00E-185 | 659.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09816.t1 | F4JY11 | 72.2 | 403 | 112 | 0 | 1 | 403 | 38 | 440 | 1.8e-162 | 573.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09816.t1 | A0A1S2XSL9 | 90.6 | 405 | 36 | 2 | 1 | 403 | 36 | 440 | 7.5e-186 | 659.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052469 | MS.gene09816 | -0.800666 | 1.30E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene09816 | MS.gene25783 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09816.t1 | MTR_7g100360 | 98.526 | 407 | 2 | 1 | 1 | 403 | 38 | 444 | 0.0 | 814 |
| MS.gene09816.t1 | MTR_1g067370 | 85.608 | 403 | 55 | 2 | 1 | 403 | 40 | 439 | 0.0 | 644 |
| MS.gene09816.t1 | MTR_3g080830 | 52.956 | 406 | 182 | 5 | 1 | 403 | 38 | 437 | 1.20e-146 | 423 |
| MS.gene09816.t1 | MTR_1g025450 | 58.667 | 150 | 60 | 1 | 1 | 150 | 315 | 462 | 1.14e-35 | 137 |
| MS.gene09816.t1 | MTR_1g061930 | 35.537 | 121 | 75 | 3 | 285 | 402 | 1 | 121 | 5.72e-19 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09816.t1 | AT5G18520 | 80.397 | 403 | 79 | 0 | 1 | 403 | 38 | 440 | 0.0 | 672 |
| MS.gene09816.t1 | AT3G09570 | 77.419 | 403 | 91 | 0 | 1 | 403 | 37 | 439 | 0.0 | 632 |
| MS.gene09816.t1 | AT5G02630 | 64.706 | 391 | 131 | 3 | 1 | 389 | 36 | 421 | 0.0 | 513 |
| MS.gene09816.t1 | AT5G42090 | 52.346 | 405 | 189 | 3 | 1 | 403 | 37 | 439 | 8.63e-150 | 431 |
Find 87 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTAACTTTCTTTGTATTT+TGG | 0.133925 | 7.1:-7726558 | MS.gene09816:CDS |
| TCACCGCATTCATCTTCTTA+TGG | 0.284793 | 7.1:-7726503 | MS.gene09816:CDS |
| TGTGATTCCTCTGCAAGTTT+TGG | 0.286595 | 7.1:-7726263 | MS.gene09816:CDS |
| GTAACCCAATCTTTGATAAA+AGG | 0.306214 | 7.1:+7726205 | None:intergenic |
| GAAACCGAGACGGGAGGATT+CGG | 0.318301 | 7.1:+7726906 | None:intergenic |
| AAACCGAGACGGGAGGATTC+GGG | 0.347123 | 7.1:+7726907 | None:intergenic |
| GGAGATGGTGACGTGGCCTT+TGG | 0.356483 | 7.1:+7726972 | None:intergenic |
| GGATTCGGGTTGGGAGGAGG+AGG | 0.366479 | 7.1:+7726921 | None:intergenic |
| TTATCAAAGATTGGGTTACT+TGG | 0.371451 | 7.1:-7726201 | MS.gene09816:CDS |
| GGAGGATTCGGGTTGGGAGG+AGG | 0.372265 | 7.1:+7726918 | None:intergenic |
| GCGGTGAATAGAACGTTTAT+TGG | 0.391274 | 7.1:+7726519 | None:intergenic |
| AGATTGGGTTACTTGGAATC+AGG | 0.404748 | 7.1:-7726194 | MS.gene09816:CDS |
| AAGAAGAGACTGTATTCGTT+AGG | 0.422783 | 7.1:+7726721 | None:intergenic |
| GAGATGGTGACGTGGCCTTT+GGG | 0.424270 | 7.1:+7726973 | None:intergenic |
| TTGCTGCTTATAAGTATCAA+TGG | 0.424992 | 7.1:-7725970 | MS.gene09816:CDS |
| AAGCAGCTCAAATTGCTCTC+AGG | 0.433578 | 7.1:-7725835 | MS.gene09816:CDS |
| AATTTAGCTTCCGTTGTGAT+TGG | 0.437101 | 7.1:-7726238 | MS.gene09816:CDS |
| GAGACGGGAGGATTCGGGTT+GGG | 0.437820 | 7.1:+7726912 | None:intergenic |
| AAGCATTATGTTAAGGTCAC+TGG | 0.448272 | 7.1:-7726430 | MS.gene09816:CDS |
| GGAGGAGGAGAGAGGAGTGA+CGG | 0.449807 | 7.1:+7726936 | None:intergenic |
| AACATGGAAACAGAGGTTTC+AGG | 0.453845 | 7.1:+7726685 | None:intergenic |
| ACGGGAGGATTCGGGTTGGG+AGG | 0.462015 | 7.1:+7726915 | None:intergenic |
| TTCCGTTGTGATTGGTGAGA+CGG | 0.473034 | 7.1:-7726230 | MS.gene09816:CDS |
| AGAAGAGACTGTATTCGTTA+GGG | 0.475436 | 7.1:+7726722 | None:intergenic |
| TATTCGTTAGGGGTAGTGAC+GGG | 0.478207 | 7.1:+7726733 | None:intergenic |
| TTTGGTCTATTAGATCACTT+AGG | 0.480355 | 7.1:-7726120 | MS.gene09816:CDS |
| GTTGGATCTCGATGAGGACT+TGG | 0.482187 | 7.1:+7726857 | None:intergenic |
| TTGGTCTATTAGATCACTTA+GGG | 0.482990 | 7.1:-7726119 | MS.gene09816:CDS |
| GTTCTATATGTTTAGACCTG+TGG | 0.484013 | 7.1:-7725897 | MS.gene09816:CDS |
| AGAGGATAAGCATTATGTTA+AGG | 0.486485 | 7.1:-7726437 | MS.gene09816:CDS |
| TGCTGCTTATAAGTATCAAT+GGG | 0.491550 | 7.1:-7725969 | MS.gene09816:CDS |
| GGTTGGGAGGAGGAGGAGAG+AGG | 0.501579 | 7.1:+7726928 | None:intergenic |
| AATCTCGGTGCGAACGAACA+TGG | 0.502025 | 7.1:+7726669 | None:intergenic |
| TGTTCTTGATGAGGAGGAAG+AGG | 0.503016 | 7.1:-7725858 | MS.gene09816:CDS |
| TTAAGTAAGCAAGGAAGAAG+AGG | 0.505449 | 7.1:+7726575 | None:intergenic |
| TCCGTTGTGATTGGTGAGAC+GGG | 0.506473 | 7.1:-7726229 | MS.gene09816:CDS |
| AAGGAGGAGGAGAGAGGTCA+CGG | 0.512614 | 7.1:+7726779 | None:intergenic |
| AAGGTCACTGGTTTACCTCA+TGG | 0.517901 | 7.1:-7726418 | MS.gene09816:CDS |
| TTGAAGGAAGCGGAAGGAGG+AGG | 0.520743 | 7.1:+7726766 | None:intergenic |
| AGCAGCTCAAATTGCTCTCA+GGG | 0.524563 | 7.1:-7725834 | MS.gene09816:CDS |
| TCTCGATGAGGACTTGGATG+AGG | 0.525605 | 7.1:+7726863 | None:intergenic |
| GATCTAATAGACCAAACGAT+AGG | 0.528991 | 7.1:+7726127 | None:intergenic |
| CAAAGAAAGTTAAGTAAGCA+AGG | 0.529021 | 7.1:+7726566 | None:intergenic |
| ATCTAATAGACCAAACGATA+GGG | 0.534064 | 7.1:+7726128 | None:intergenic |
| CACTGGTTTACCTCATGGAT+GGG | 0.537772 | 7.1:-7726413 | MS.gene09816:CDS |
| TCTAAAGACTATCTCTCCGC+TGG | 0.539952 | 7.1:-7726625 | MS.gene09816:CDS |
| CTCGATGAGGACTTGGATGA+GGG | 0.546281 | 7.1:+7726864 | None:intergenic |
| TCACTGGTTTACCTCATGGA+TGG | 0.546620 | 7.1:-7726414 | MS.gene09816:CDS |
| GGATGAGGGTTTCTTCGTTG+AGG | 0.548877 | 7.1:+7726878 | None:intergenic |
| GACGGGGTAAGAGCGGTTGA+AGG | 0.557679 | 7.1:+7726750 | None:intergenic |
| TGAGTACTTTGTTCTTGATG+AGG | 0.557725 | 7.1:-7725867 | MS.gene09816:CDS |
| AAACAGATGGAAAAGCTTCG+AGG | 0.570433 | 7.1:-7726087 | MS.gene09816:CDS |
| GAGAGGAGTGACGGAGACAG+AGG | 0.573405 | 7.1:+7726945 | None:intergenic |
| CAACCCGAATCCTCCCGTCT+CGG | 0.573986 | 7.1:-7726910 | MS.gene09816:CDS |
| GGTCACGGAAAGTGAAGAGA+CGG | 0.574075 | 7.1:+7726794 | None:intergenic |
| GTAAGAGCGGTTGAAGGAAG+CGG | 0.576490 | 7.1:+7726756 | None:intergenic |
| GAATCGAGGACACAGAAGGA+AGG | 0.585251 | 7.1:+7726829 | None:intergenic |
| AGTGACGGAGACAGAGGAGA+CGG | 0.587327 | 7.1:+7726951 | None:intergenic |
| GTACTTTGTTCTTGATGAGG+AGG | 0.589383 | 7.1:-7725864 | MS.gene09816:CDS |
| AAGCGGAAGGAGGAGGAGAG+AGG | 0.590525 | 7.1:+7726773 | None:intergenic |
| CGGTTGAAGGAAGCGGAAGG+AGG | 0.591628 | 7.1:+7726763 | None:intergenic |
| AGGGAAACATCGAAAACAGA+TGG | 0.594318 | 7.1:-7726100 | MS.gene09816:CDS |
| TGAGGGTTTCTTCGTTGAGG+AGG | 0.595629 | 7.1:+7726881 | None:intergenic |
| GTCACGGAAAGTGAAGAGAC+GGG | 0.595959 | 7.1:+7726795 | None:intergenic |
| GTATTCGTTAGGGGTAGTGA+CGG | 0.596419 | 7.1:+7726732 | None:intergenic |
| CGAGACGGGAGGATTCGGGT+TGG | 0.598000 | 7.1:+7726911 | None:intergenic |
| TGCATCGAGATTGAAAATCT+CGG | 0.601809 | 7.1:+7726654 | None:intergenic |
| GAGGAGGAAGAAACCGAGAC+GGG | 0.604086 | 7.1:+7726897 | None:intergenic |
| GTGAGAATCGAGGACACAGA+AGG | 0.610226 | 7.1:+7726825 | None:intergenic |
| GAATCTTATCTGTGCTGCAG+AGG | 0.612979 | 7.1:-7726455 | MS.gene09816:CDS |
| AATCGAGGACACAGAAGGAA+GGG | 0.620605 | 7.1:+7726830 | None:intergenic |
| GGAGACAGAGGAGACGGAGA+TGG | 0.624066 | 7.1:+7726957 | None:intergenic |
| AAATTCGGTTTCACTCCCAA+AGG | 0.630515 | 7.1:-7726988 | MS.gene09816:CDS |
| AAATTAGCCAAAACTTGCAG+AGG | 0.630803 | 7.1:+7726256 | None:intergenic |
| GGGTAGTGACGGGGTAAGAG+CGG | 0.632558 | 7.1:+7726743 | None:intergenic |
| AGGGAGTTGAGTTTGTCCAG+CGG | 0.637182 | 7.1:+7726609 | None:intergenic |
| TGAGGAGGAAGAAACCGAGA+CGG | 0.644160 | 7.1:+7726896 | None:intergenic |
| GAGCGGTTGAAGGAAGCGGA+AGG | 0.646658 | 7.1:+7726760 | None:intergenic |
| ATTCGTTAGGGGTAGTGACG+GGG | 0.652907 | 7.1:+7726734 | None:intergenic |
| GAGGAAGAAACCGAGACGGG+AGG | 0.660795 | 7.1:+7726900 | None:intergenic |
| GAAGAGACTGTATTCGTTAG+GGG | 0.661935 | 7.1:+7726723 | None:intergenic |
| AGGAGACGGAGATGGTGACG+TGG | 0.672788 | 7.1:+7726965 | None:intergenic |
| GCGAACGAACATGGAAACAG+AGG | 0.693889 | 7.1:+7726678 | None:intergenic |
| GGGAAATGTAGTGAGAATCG+AGG | 0.694476 | 7.1:+7726815 | None:intergenic |
| ACCCGTCTCACCAATCACAA+CGG | 0.703906 | 7.1:+7726228 | None:intergenic |
| AACAATACATCCCATCCATG+AGG | 0.704032 | 7.1:+7726403 | None:intergenic |
| CAGCCATAAGAAGATGAATG+CGG | 0.717165 | 7.1:+7726500 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTTATATTGTTGTTATT+GGG | - | chr7.1:7726781-7726800 | MS.gene09816:CDS | 15.0% |
| !!! | ACTTAACTTTCTTTGTATTT+TGG | - | chr7.1:7726259-7726278 | MS.gene09816:CDS | 20.0% |
| !!! | CAGTTTTATATTGTTGTTAT+TGG | - | chr7.1:7726780-7726799 | MS.gene09816:CDS | 20.0% |
| !!! | TTTACTGTTATTGTTTTGAT+CGG | - | chr7.1:7726471-7726490 | MS.gene09816:CDS | 20.0% |
| AGAGGATAAGCATTATGTTA+AGG | - | chr7.1:7726380-7726399 | MS.gene09816:CDS | 30.0% | |
| ATCTAATAGACCAAACGATA+GGG | + | chr7.1:7726692-7726711 | None:intergenic | 30.0% | |
| ATGATCCTCTTCGAAAAATT+CGG | - | chr7.1:7725814-7725833 | MS.gene09816:CDS | 30.0% | |
| CAAAGAAAGTTAAGTAAGCA+AGG | + | chr7.1:7726254-7726273 | None:intergenic | 30.0% | |
| GTAACCCAATCTTTGATAAA+AGG | + | chr7.1:7726615-7726634 | None:intergenic | 30.0% | |
| TTATCAAAGATTGGGTTACT+TGG | - | chr7.1:7726616-7726635 | MS.gene09816:CDS | 30.0% | |
| TTGGTCTATTAGATCACTTA+GGG | - | chr7.1:7726698-7726717 | MS.gene09816:CDS | 30.0% | |
| TTTGGTCTATTAGATCACTT+AGG | - | chr7.1:7726697-7726716 | MS.gene09816:CDS | 30.0% | |
| ! | CTATTATTTTCCCTATCGTT+TGG | - | chr7.1:7726679-7726698 | MS.gene09816:CDS | 30.0% |
| ! | TGCTGCTTATAAGTATCAAT+GGG | - | chr7.1:7726848-7726867 | MS.gene09816:CDS | 30.0% |
| ! | TTGCTGCTTATAAGTATCAA+TGG | - | chr7.1:7726847-7726866 | MS.gene09816:CDS | 30.0% |
| ! | TTTTCCCTATCTTGCAAAAA+CGG | + | chr7.1:7726519-7726538 | None:intergenic | 30.0% |
| AAATTAGCCAAAACTTGCAG+AGG | + | chr7.1:7726564-7726583 | None:intergenic | 35.0% | |
| AAGAAGAGACTGTATTCGTT+AGG | + | chr7.1:7726099-7726118 | None:intergenic | 35.0% | |
| AAGAAGAGGAAAAAGAGAGA+AGG | + | chr7.1:7726231-7726250 | None:intergenic | 35.0% | |
| AAGCATTATGTTAAGGTCAC+TGG | - | chr7.1:7726387-7726406 | MS.gene09816:CDS | 35.0% | |
| AGAAGAGACTGTATTCGTTA+GGG | + | chr7.1:7726098-7726117 | None:intergenic | 35.0% | |
| AGAAGAGGAAAAAGAGAGAA+GGG | + | chr7.1:7726230-7726249 | None:intergenic | 35.0% | |
| GATCTAATAGACCAAACGAT+AGG | + | chr7.1:7726693-7726712 | None:intergenic | 35.0% | |
| GTTCTATATGTTTAGACCTG+TGG | - | chr7.1:7726920-7726939 | MS.gene09816:CDS | 35.0% | |
| TGAGTACTTTGTTCTTGATG+AGG | - | chr7.1:7726950-7726969 | MS.gene09816:CDS | 35.0% | |
| TGCATCGAGATTGAAAATCT+CGG | + | chr7.1:7726166-7726185 | None:intergenic | 35.0% | |
| TTAAGTAAGCAAGGAAGAAG+AGG | + | chr7.1:7726245-7726264 | None:intergenic | 35.0% | |
| ! | AATTTAGCTTCCGTTGTGAT+TGG | - | chr7.1:7726579-7726598 | MS.gene09816:CDS | 35.0% |
| ! | ATTTTCAATCTCGATGCAGA+CGG | - | chr7.1:7726168-7726187 | MS.gene09816:CDS | 35.0% |
| ! | GGGTCCTTTTATCAAAGATT+GGG | - | chr7.1:7726608-7726627 | MS.gene09816:CDS | 35.0% |
| !! | AAGTACTCATTTTTCTCCAC+AGG | + | chr7.1:7726939-7726958 | None:intergenic | 35.0% |
| !! | GAAACCGTTTTTGCAAGATA+GGG | - | chr7.1:7726512-7726531 | MS.gene09816:CDS | 35.0% |
| !! | TGAAACCGAATTTTTCGAAG+AGG | + | chr7.1:7725822-7725841 | None:intergenic | 35.0% |
| !! | TGAAACCGTTTTTGCAAGAT+AGG | - | chr7.1:7726511-7726530 | MS.gene09816:CDS | 35.0% |
| !!! | GTTATTGTTTTGATCGGTAC+TGG | - | chr7.1:7726477-7726496 | MS.gene09816:CDS | 35.0% |
| AAACAGATGGAAAAGCTTCG+AGG | - | chr7.1:7726730-7726749 | MS.gene09816:CDS | 40.0% | |
| AAATTCGGTTTCACTCCCAA+AGG | - | chr7.1:7725829-7725848 | MS.gene09816:CDS | 40.0% | |
| AACAATACATCCCATCCATG+AGG | + | chr7.1:7726417-7726436 | None:intergenic | 40.0% | |
| AACATGGAAACAGAGGTTTC+AGG | + | chr7.1:7726135-7726154 | None:intergenic | 40.0% | |
| AGATTGGGTTACTTGGAATC+AGG | - | chr7.1:7726623-7726642 | MS.gene09816:CDS | 40.0% | |
| AGGGAAACATCGAAAACAGA+TGG | - | chr7.1:7726717-7726736 | MS.gene09816:CDS | 40.0% | |
| CAGCCATAAGAAGATGAATG+CGG | + | chr7.1:7726320-7726339 | None:intergenic | 40.0% | |
| GAAGAGACTGTATTCGTTAG+GGG | + | chr7.1:7726097-7726116 | None:intergenic | 40.0% | |
| GCGGTGAATAGAACGTTTAT+TGG | + | chr7.1:7726301-7726320 | None:intergenic | 40.0% | |
| GTACTTTGTTCTTGATGAGG+AGG | - | chr7.1:7726953-7726972 | MS.gene09816:CDS | 40.0% | |
| TCACCGCATTCATCTTCTTA+TGG | - | chr7.1:7726314-7726333 | MS.gene09816:CDS | 40.0% | |
| ! | CGGGTCCTTTTATCAAAGAT+TGG | - | chr7.1:7726607-7726626 | MS.gene09816:CDS | 40.0% |
| ! | TGTGATTCCTCTGCAAGTTT+TGG | - | chr7.1:7726554-7726573 | MS.gene09816:CDS | 40.0% |
| !! | GGCTGTTTTGCTTATCATGA+AGG | - | chr7.1:7726335-7726354 | MS.gene09816:CDS | 40.0% |
| !!! | TTGTTTTGATCGGTACTGGT+TGG | - | chr7.1:7726481-7726500 | MS.gene09816:CDS | 40.0% |
| AAGCAGCTCAAATTGCTCTC+AGG | - | chr7.1:7726982-7727001 | MS.gene09816:CDS | 45.0% | |
| AATCGAGGACACAGAAGGAA+GGG | + | chr7.1:7725990-7726009 | None:intergenic | 45.0% | |
| AGCAGCTCAAATTGCTCTCA+GGG | - | chr7.1:7726983-7727002 | MS.gene09816:CDS | 45.0% | |
| GAATCTTATCTGTGCTGCAG+AGG | - | chr7.1:7726362-7726381 | MS.gene09816:CDS | 45.0% | |
| GGGAAATGTAGTGAGAATCG+AGG | + | chr7.1:7726005-7726024 | None:intergenic | 45.0% | |
| GTATTCGTTAGGGGTAGTGA+CGG | + | chr7.1:7726088-7726107 | None:intergenic | 45.0% | |
| TATTCGTTAGGGGTAGTGAC+GGG | + | chr7.1:7726087-7726106 | None:intergenic | 45.0% | |
| TCTAAAGACTATCTCTCCGC+TGG | - | chr7.1:7726192-7726211 | MS.gene09816:CDS | 45.0% | |
| TGTTCTTGATGAGGAGGAAG+AGG | - | chr7.1:7726959-7726978 | MS.gene09816:CDS | 45.0% | |
| TTCCGTTGTGATTGGTGAGA+CGG | - | chr7.1:7726587-7726606 | MS.gene09816:CDS | 45.0% | |
| !! | AAGGTCACTGGTTTACCTCA+TGG | - | chr7.1:7726399-7726418 | MS.gene09816:CDS | 45.0% |
| !! | CACAGAAGGAAGGGTTTTGT+TGG | + | chr7.1:7725981-7726000 | None:intergenic | 45.0% |
| !! | CACTGGTTTACCTCATGGAT+GGG | - | chr7.1:7726404-7726423 | MS.gene09816:CDS | 45.0% |
| !! | TCACTGGTTTACCTCATGGA+TGG | - | chr7.1:7726403-7726422 | MS.gene09816:CDS | 45.0% |
| !!! | GGTTTTGTTGGATCTCGATG+AGG | + | chr7.1:7725969-7725988 | None:intergenic | 45.0% |
| ACCCGTCTCACCAATCACAA+CGG | + | chr7.1:7726592-7726611 | None:intergenic | 50.0% | |
| AGGGAGTTGAGTTTGTCCAG+CGG | + | chr7.1:7726211-7726230 | None:intergenic | 50.0% | |
| ATTCGTTAGGGGTAGTGACG+GGG | + | chr7.1:7726086-7726105 | None:intergenic | 50.0% | |
| CTCGATGAGGACTTGGATGA+GGG | + | chr7.1:7725956-7725975 | None:intergenic | 50.0% | |
| GAATCGAGGACACAGAAGGA+AGG | + | chr7.1:7725991-7726010 | None:intergenic | 50.0% | |
| GCGAACGAACATGGAAACAG+AGG | + | chr7.1:7726142-7726161 | None:intergenic | 50.0% | |
| GGATGAGGGTTTCTTCGTTG+AGG | + | chr7.1:7725942-7725961 | None:intergenic | 50.0% | |
| GGTCACGGAAAGTGAAGAGA+CGG | + | chr7.1:7726026-7726045 | None:intergenic | 50.0% | |
| GTAAGAGCGGTTGAAGGAAG+CGG | + | chr7.1:7726064-7726083 | None:intergenic | 50.0% | |
| GTCACGGAAAGTGAAGAGAC+GGG | + | chr7.1:7726025-7726044 | None:intergenic | 50.0% | |
| GTGAGAATCGAGGACACAGA+AGG | + | chr7.1:7725995-7726014 | None:intergenic | 50.0% | |
| GTTGGATCTCGATGAGGACT+TGG | + | chr7.1:7725963-7725982 | None:intergenic | 50.0% | |
| TCCGTTGTGATTGGTGAGAC+GGG | - | chr7.1:7726588-7726607 | MS.gene09816:CDS | 50.0% | |
| TCTCGATGAGGACTTGGATG+AGG | + | chr7.1:7725957-7725976 | None:intergenic | 50.0% | |
| TGAGGAGGAAGAAACCGAGA+CGG | + | chr7.1:7725924-7725943 | None:intergenic | 50.0% | |
| TGAGGGTTTCTTCGTTGAGG+AGG | + | chr7.1:7725939-7725958 | None:intergenic | 50.0% | |
| ! | AATCTCGGTGCGAACGAACA+TGG | + | chr7.1:7726151-7726170 | None:intergenic | 50.0% |
| AAACCGAGACGGGAGGATTC+GGG | + | chr7.1:7725913-7725932 | None:intergenic | 55.0% | |
| AAGGAGGAGGAGAGAGGTCA+CGG | + | chr7.1:7726041-7726060 | None:intergenic | 55.0% | |
| GAAACCGAGACGGGAGGATT+CGG | + | chr7.1:7725914-7725933 | None:intergenic | 55.0% | |
| GAGGAGGAAGAAACCGAGAC+GGG | + | chr7.1:7725923-7725942 | None:intergenic | 55.0% | |
| TTGAAGGAAGCGGAAGGAGG+AGG | + | chr7.1:7726054-7726073 | None:intergenic | 55.0% | |
| ! | AGTGACGGAGACAGAGGAGA+CGG | + | chr7.1:7725869-7725888 | None:intergenic | 55.0% |
| ! | GAGATGGTGACGTGGCCTTT+GGG | + | chr7.1:7725847-7725866 | None:intergenic | 55.0% |
| AAGCGGAAGGAGGAGGAGAG+AGG | + | chr7.1:7726047-7726066 | None:intergenic | 60.0% | |
| CAACCCGAATCCTCCCGTCT+CGG | - | chr7.1:7725907-7725926 | MS.gene09816:CDS | 60.0% | |
| CGGTTGAAGGAAGCGGAAGG+AGG | + | chr7.1:7726057-7726076 | None:intergenic | 60.0% | |
| GACGGGGTAAGAGCGGTTGA+AGG | + | chr7.1:7726070-7726089 | None:intergenic | 60.0% | |
| GAGCGGTTGAAGGAAGCGGA+AGG | + | chr7.1:7726060-7726079 | None:intergenic | 60.0% | |
| GAGGAAGAAACCGAGACGGG+AGG | + | chr7.1:7725920-7725939 | None:intergenic | 60.0% | |
| GGAGACAGAGGAGACGGAGA+TGG | + | chr7.1:7725863-7725882 | None:intergenic | 60.0% | |
| GGAGGAGGAGAGAGGAGTGA+CGG | + | chr7.1:7725884-7725903 | None:intergenic | 60.0% | |
| ! | AGGAGACGGAGATGGTGACG+TGG | + | chr7.1:7725855-7725874 | None:intergenic | 60.0% |
| ! | GAGACGGGAGGATTCGGGTT+GGG | + | chr7.1:7725908-7725927 | None:intergenic | 60.0% |
| ! | GAGAGGAGTGACGGAGACAG+AGG | + | chr7.1:7725875-7725894 | None:intergenic | 60.0% |
| ! | GGAGATGGTGACGTGGCCTT+TGG | + | chr7.1:7725848-7725867 | None:intergenic | 60.0% |
| ! | GGGTAGTGACGGGGTAAGAG+CGG | + | chr7.1:7726077-7726096 | None:intergenic | 60.0% |
| CGAGACGGGAGGATTCGGGT+TGG | + | chr7.1:7725909-7725928 | None:intergenic | 65.0% | |
| GGTTGGGAGGAGGAGGAGAG+AGG | + | chr7.1:7725892-7725911 | None:intergenic | 65.0% | |
| !! | ACGGGAGGATTCGGGTTGGG+AGG | + | chr7.1:7725905-7725924 | None:intergenic | 65.0% |
| !! | GGAGGATTCGGGTTGGGAGG+AGG | + | chr7.1:7725902-7725921 | None:intergenic | 65.0% |
| !! | GGATTCGGGTTGGGAGGAGG+AGG | + | chr7.1:7725899-7725918 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 7725814 | 7727025 | 7725814 | ID=MS.gene09816 |
| chr7.1 | mRNA | 7725814 | 7727025 | 7725814 | ID=MS.gene09816.t1;Parent=MS.gene09816 |
| chr7.1 | exon | 7725814 | 7727025 | 7725814 | ID=MS.gene09816.t1.exon1;Parent=MS.gene09816.t1 |
| chr7.1 | CDS | 7725814 | 7727025 | 7725814 | ID=cds.MS.gene09816.t1;Parent=MS.gene09816.t1 |
| Gene Sequence |
| Protein sequence |
