AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene09827

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09827.t1 MTR_7g100240 97.838 370 8 0 1 370 1 370 0.0 753
MS.gene09827.t1 MTR_1g067210 76.738 374 82 1 1 369 1 374 0.0 593
MS.gene09827.t1 MTR_1g116260 66.667 348 112 2 5 348 13 360 8.97e-174 489
MS.gene09827.t1 MTR_7g081020 64.481 366 126 2 4 365 6 371 1.97e-168 475
MS.gene09827.t1 MTR_1g112840 62.842 366 132 2 4 365 11 376 2.30e-166 471
MS.gene09827.t1 MTR_8g074930 62.644 348 129 1 17 363 25 372 3.47e-164 465
MS.gene09827.t1 MTR_2g033910 56.164 365 146 3 5 363 12 368 3.40e-149 426
MS.gene09827.t1 MTR_7g081020 64.765 298 102 1 4 298 6 303 1.23e-136 392
MS.gene09827.t1 MTR_0015s0140 54.268 328 141 3 22 349 38 356 3.89e-127 370
MS.gene09827.t1 MTR_1g106855 53.776 331 143 2 18 346 16 338 3.17e-123 360
MS.gene09827.t1 MTR_8g074930 64.231 260 92 1 105 363 1 260 6.69e-122 353
MS.gene09827.t1 MTR_0015s0140 55.823 249 109 1 101 349 55 302 9.66e-99 296
MS.gene09827.t1 MTR_3g032660 46.154 325 158 6 29 346 33 347 1.04e-95 292
MS.gene09827.t1 MTR_3g032700 46.769 325 156 7 29 346 33 347 1.35e-95 291
MS.gene09827.t1 MTR_1g106855 50.709 282 129 2 18 297 16 289 5.40e-94 283
MS.gene09827.t1 MTR_7g090530 46.462 325 157 6 29 346 34 348 7.92e-91 280
MS.gene09827.t1 MTR_7g090550 44.848 330 165 6 29 350 35 355 2.62e-88 273
MS.gene09827.t1 MTR_3g032590 45.149 268 127 5 85 346 100 353 8.51e-71 228
MS.gene09827.t1 MTR_4g113480 35.952 331 193 6 22 348 34 349 2.84e-61 206
MS.gene09827.t1 MTR_4g113345 33.903 351 188 14 3 348 1 312 1.47e-44 157
MS.gene09827.t1 MTR_7g060770 29.530 298 181 6 71 349 263 550 3.64e-39 147
MS.gene09827.t1 MTR_4g119830 29.483 329 173 7 71 345 164 487 1.81e-38 144
MS.gene09827.t1 MTR_4g076560 30.435 299 176 7 70 349 201 486 3.76e-37 140
MS.gene09827.t1 MTR_7g090540 41.117 197 93 5 159 350 7 185 3.20e-35 130
MS.gene09827.t1 MTR_4g063905 30.466 279 152 6 108 349 426 699 2.94e-34 134
MS.gene09827.t1 MTR_4g113210 31.716 268 149 9 21 279 15 257 2.61e-33 125
MS.gene09827.t1 MTR_1g085530 28.904 301 149 5 109 349 592 887 4.24e-33 131
MS.gene09827.t1 MTR_4g098650 29.773 309 158 6 102 356 475 778 1.32e-32 129
MS.gene09827.t1 MTR_3g464700 32.883 222 107 5 71 291 118 298 1.12e-31 122
MS.gene09827.t1 MTR_5g071550 34.529 223 104 6 70 291 153 334 1.25e-31 123
MS.gene09827.t1 MTR_3g464650 29.964 277 138 7 70 345 93 314 1.77e-30 119
MS.gene09827.t1 MTR_5g071550 33.184 223 105 7 70 289 153 334 7.13e-28 112
MS.gene09827.t1 MTR_1g115570 28.387 310 149 9 47 353 106 345 3.02e-26 107
MS.gene09827.t1 MTR_2g078760 30.935 278 127 10 71 345 38 253 2.34e-24 100
MS.gene09827.t1 MTR_2g078760 30.935 278 127 10 71 345 117 332 4.69e-24 101
MS.gene09827.t1 MTR_5g063940 31.348 319 143 13 31 343 31 279 7.20e-24 100
MS.gene09827.t1 MTR_5g063940 32.639 288 126 12 62 343 7 232 9.35e-24 98.6
MS.gene09827.t1 MTR_1g014640 30.258 271 139 9 47 313 88 312 9.66e-24 100
MS.gene09827.t1 MTR_1g013400 30.258 271 139 9 47 313 88 312 9.66e-24 100
MS.gene09827.t1 MTR_4g094208 30.526 285 145 12 35 314 30 266 1.27e-23 99.4
MS.gene09827.t1 MTR_3g091060 30.435 230 113 6 66 291 120 306 1.72e-23 100
MS.gene09827.t1 MTR_5g024340 29.371 286 129 9 71 346 124 346 3.16e-23 100
MS.gene09827.t1 MTR_3g105730 28.667 300 145 11 47 343 23 256 3.76e-23 97.8
MS.gene09827.t1 MTR_3g105730 28.667 300 145 11 47 343 45 278 3.76e-23 98.6
MS.gene09827.t1 MTR_2g008850 29.433 282 136 9 64 343 12 232 2.48e-22 94.7
MS.gene09827.t1 MTR_4g125810 29.688 256 121 7 54 291 231 445 8.00e-22 97.1
MS.gene09827.t1 MTR_2g008850 29.433 282 136 9 64 343 58 278 1.33e-21 93.6
MS.gene09827.t1 MTR_4g123080 31.186 295 141 14 62 347 87 328 3.16e-21 94.0
MS.gene09827.t1 MTR_4g123080 31.186 295 141 14 62 347 105 346 3.36e-21 94.4
MS.gene09827.t1 MTR_3g074610 29.114 316 154 13 31 343 31 279 9.69e-21 91.3
MS.gene09827.t1 MTR_8g463130 27.760 317 160 12 30 343 1 251 1.35e-20 90.5
MS.gene09827.t1 MTR_8g463130 27.500 320 163 12 30 346 29 282 1.38e-20 90.9
MS.gene09827.t1 MTR_2g033000 30.175 285 140 9 70 346 99 332 2.03e-20 91.7
MS.gene09827.t1 MTR_1g050520 29.181 281 141 10 72 347 419 646 8.90e-20 91.3
MS.gene09827.t1 MTR_3g107880 28.231 294 146 12 66 350 59 296 1.51e-19 88.6
MS.gene09827.t1 MTR_3g104710 28.525 305 159 12 60 345 275 539 3.12e-19 89.4
MS.gene09827.t1 MTR_3g107880 28.421 285 143 11 66 345 116 344 3.40e-19 88.6
MS.gene09827.t1 MTR_3g107880 28.421 285 143 11 66 345 117 345 3.95e-19 88.2
MS.gene09827.t1 MTR_2g078760 30.841 214 103 8 71 281 117 288 1.24e-18 85.5
MS.gene09827.t1 MTR_1g028300 28.037 321 175 11 35 349 113 383 1.46e-18 86.7
MS.gene09827.t1 MTR_5g080680 28.017 232 128 5 68 292 129 328 2.46e-18 85.9
MS.gene09827.t1 MTR_7g025640 30.698 215 110 6 135 345 7 186 3.58e-18 82.4
MS.gene09827.t1 MTR_3g068200 25.338 296 157 10 71 345 123 375 9.17e-18 84.3
MS.gene09827.t1 MTR_4g094542 28.740 254 110 11 71 308 150 348 1.48e-17 83.6
MS.gene09827.t1 MTR_1g015110 27.419 310 149 12 67 348 285 546 2.60e-17 83.6
MS.gene09827.t1 MTR_1g086350 26.573 286 149 11 70 346 101 334 1.93e-16 80.1
MS.gene09827.t1 MTR_1g086350 26.573 286 149 11 70 346 117 350 2.22e-16 80.1
MS.gene09827.t1 MTR_7g093240 35.333 150 61 5 150 297 4 119 2.35e-16 75.1
MS.gene09827.t1 MTR_3g105880 25.263 285 139 10 52 292 33 287 3.29e-16 79.0
MS.gene09827.t1 MTR_3g105880 25.263 285 139 10 52 292 33 287 4.23e-16 79.3
MS.gene09827.t1 MTR_2g435550 29.474 285 145 12 71 326 78 335 1.05e-15 77.8
MS.gene09827.t1 MTR_2g435550 29.225 284 147 11 71 326 92 349 1.27e-15 77.8
MS.gene09827.t1 MTR_1g014190 26.217 267 123 10 70 292 51 287 1.87e-15 77.0
MS.gene09827.t1 MTR_1g086350 26.950 282 145 12 74 346 19 248 2.43e-15 75.9
MS.gene09827.t1 MTR_1g014190 25.468 267 125 9 70 292 89 325 4.69e-15 76.3
MS.gene09827.t1 MTR_7g021530 32.704 159 89 5 152 309 245 386 7.78e-15 75.9
MS.gene09827.t1 MTR_7g021530 32.704 159 89 5 152 309 204 345 8.48e-15 75.5
MS.gene09827.t1 MTR_7g021530 32.704 159 89 5 152 309 154 295 1.08e-14 75.1
MS.gene09827.t1 MTR_2g435550 29.368 269 135 11 71 311 92 333 1.29e-14 74.7
MS.gene09827.t1 MTR_8g017240 28.682 258 142 9 71 310 86 319 1.50e-14 74.7
MS.gene09827.t1 MTR_5g071550 34.646 127 66 4 71 196 154 264 4.76e-14 72.4
MS.gene09827.t1 MTR_4g013295 26.462 325 159 14 63 351 69 349 1.06e-13 72.0
MS.gene09827.t1 MTR_5g009370 24.055 291 166 7 71 349 87 334 2.06e-12 67.8
MS.gene09827.t1 MTR_3g491830 26.087 253 139 10 70 297 88 317 2.13e-12 68.2
MS.gene09827.t1 MTR_1g083690 27.817 284 151 13 71 326 89 346 6.20e-12 66.6
MS.gene09827.t1 MTR_1g016620 26.792 265 137 10 56 292 53 288 7.00e-12 66.2
MS.gene09827.t1 MTR_4g120410 30.500 200 103 8 138 326 174 348 7.13e-12 66.6
MS.gene09827.t1 MTR_4g094208 30.058 173 95 8 35 204 30 179 7.36e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09827.t1 AT3G12620 66.033 368 122 1 1 365 10 377 0.0 510
MS.gene09827.t1 AT3G12620 66.033 368 122 1 1 365 10 377 0.0 510
MS.gene09827.t1 AT3G55050 64.208 366 122 2 5 365 13 374 1.25e-176 496
MS.gene09827.t1 AT3G55050 64.208 366 122 2 5 365 13 374 1.25e-176 496
MS.gene09827.t1 AT3G51370 65.706 347 117 1 19 365 27 371 9.50e-174 489
MS.gene09827.t1 AT3G51370 65.706 347 117 1 19 365 27 371 9.50e-174 489
MS.gene09827.t1 AT5G66080 64.571 350 122 2 18 365 28 377 2.65e-168 475
MS.gene09827.t1 AT4G38520 61.891 349 132 1 16 363 26 374 2.51e-165 468
MS.gene09827.t1 AT4G38520 61.891 349 132 1 16 363 26 374 2.51e-165 468
MS.gene09827.t1 AT5G02760 62.534 371 135 3 1 370 1 368 6.41e-162 458
MS.gene09827.t1 AT3G17090 56.973 337 133 4 24 358 45 371 1.75e-135 392
MS.gene09827.t1 AT3G51370 63.768 276 98 1 90 365 13 286 4.41e-131 377
MS.gene09827.t1 AT5G66080 65.056 269 93 1 98 365 5 273 2.56e-127 367
MS.gene09827.t1 AT4G33920 51.576 349 150 3 22 359 20 360 2.90e-124 363
MS.gene09827.t1 AT5G06750 50.144 347 162 2 24 367 43 381 7.34e-120 352
MS.gene09827.t1 AT5G06750 50.144 347 162 2 24 367 43 381 7.34e-120 352
MS.gene09827.t1 AT3G17090 55.435 276 111 4 24 297 45 310 3.00e-106 315
MS.gene09827.t1 AT4G33920 53.114 273 117 2 98 359 5 277 2.60e-98 294
MS.gene09827.t1 AT5G06750 52.222 270 126 1 101 367 30 299 3.99e-94 284
MS.gene09827.t1 AT4G33920 54.251 247 102 2 124 359 1 247 7.38e-91 274
MS.gene09827.t1 AT3G16560 31.310 313 170 7 71 345 175 480 2.32e-42 154
MS.gene09827.t1 AT3G16560 31.310 313 170 7 71 345 175 480 2.32e-42 154
MS.gene09827.t1 AT3G16560 31.310 313 170 7 71 345 175 480 2.32e-42 154
MS.gene09827.t1 AT1G07160 34.164 281 130 7 67 345 149 376 1.14e-37 139
MS.gene09827.t1 AT5G02400 31.884 276 149 5 108 349 399 669 4.94e-37 142
MS.gene09827.t1 AT2G46920 28.713 303 150 5 108 349 542 839 1.94e-35 138
MS.gene09827.t1 AT2G46920 28.713 303 150 5 108 349 542 839 1.94e-35 138
MS.gene09827.t1 AT2G46920 28.713 303 150 5 108 349 542 839 1.94e-35 138
MS.gene09827.t1 AT2G46920 28.713 303 150 5 108 349 542 839 1.94e-35 138
MS.gene09827.t1 AT3G09400 30.037 273 151 6 108 349 382 645 1.06e-34 135
MS.gene09827.t1 AT1G07630 29.032 279 156 5 108 349 384 657 1.96e-34 134
MS.gene09827.t1 AT2G28890 29.391 279 155 5 108 349 376 649 2.55e-34 134
MS.gene09827.t1 AT2G40180 31.683 303 136 10 58 345 139 385 5.95e-34 129
MS.gene09827.t1 AT3G16560 30.742 283 151 7 71 315 175 450 2.59e-33 129
MS.gene09827.t1 AT2G35350 28.383 303 161 6 102 358 486 778 5.07e-33 130
MS.gene09827.t1 AT2G30020 32.975 279 129 9 70 345 169 392 3.10e-30 119
MS.gene09827.t1 AT1G67820 34.222 225 105 5 70 292 114 297 1.11e-28 115
MS.gene09827.t1 AT1G67820 34.222 225 105 5 70 292 150 333 1.38e-28 115
MS.gene09827.t1 AT3G09400 28.870 239 130 6 108 315 382 611 2.10e-25 108
MS.gene09827.t1 AT2G33700 32.877 292 117 12 69 347 121 346 2.20e-25 106
MS.gene09827.t1 AT4G31750 29.779 272 140 9 47 313 44 269 1.39e-24 102
MS.gene09827.t1 AT4G31750 29.779 272 140 9 47 313 44 269 1.70e-24 102
MS.gene09827.t1 AT4G31750 29.779 272 140 9 47 313 44 269 1.70e-24 102
MS.gene09827.t1 AT3G51470 28.763 299 137 11 62 348 52 286 3.70e-24 101
MS.gene09827.t1 AT3G51470 28.763 299 137 11 62 348 96 330 7.68e-24 101
MS.gene09827.t1 AT1G43900 32.526 289 121 11 62 343 145 366 1.19e-23 101
MS.gene09827.t1 AT5G10740 30.208 288 147 11 31 313 30 268 2.15e-23 100
MS.gene09827.t1 AT5G10740 30.208 288 147 11 31 313 30 268 2.15e-23 100
MS.gene09827.t1 AT1G78200 29.073 313 153 12 35 343 33 280 1.13e-22 96.7
MS.gene09827.t1 AT1G78200 29.073 313 153 12 35 343 33 280 1.13e-22 96.7
MS.gene09827.t1 AT1G78200 29.073 313 153 12 35 343 33 280 1.13e-22 96.7
MS.gene09827.t1 AT5G53140 26.421 299 147 9 71 359 132 367 6.98e-22 96.7
MS.gene09827.t1 AT5G53140 26.421 299 147 9 71 359 132 367 6.98e-22 96.7
MS.gene09827.t1 AT2G25620 28.165 316 165 13 43 348 96 359 9.48e-22 95.9
MS.gene09827.t1 AT2G25620 28.165 316 165 13 43 348 96 359 9.48e-22 95.9
MS.gene09827.t1 AT1G78200 28.671 286 140 10 62 343 10 235 1.01e-21 93.2
MS.gene09827.t1 AT1G78200 28.671 286 140 10 62 343 10 235 1.01e-21 93.2
MS.gene09827.t1 AT4G28400 29.921 254 130 9 66 314 40 250 3.08e-21 92.4
MS.gene09827.t1 AT4G28400 29.021 286 134 10 66 346 62 283 4.68e-21 92.4
MS.gene09827.t1 AT5G24940 29.474 285 147 11 31 310 30 265 4.81e-21 94.4
MS.gene09827.t1 AT2G20630 28.881 277 130 10 71 343 63 276 1.37e-20 90.9
MS.gene09827.t1 AT1G07430 29.130 230 123 5 71 292 157 354 6.25e-20 91.3
MS.gene09827.t1 AT2G20630 28.623 276 130 10 71 342 63 275 7.60e-20 89.0
MS.gene09827.t1 AT1G34750 28.846 312 151 12 38 345 37 281 1.66e-19 87.8
MS.gene09827.t1 AT1G34750 28.846 312 151 12 38 345 37 281 1.66e-19 87.8
MS.gene09827.t1 AT1G34750 28.846 312 151 12 38 345 37 281 1.66e-19 87.8
MS.gene09827.t1 AT2G29380 28.904 301 161 10 57 345 101 360 1.79e-19 89.0
MS.gene09827.t1 AT1G48040 29.290 338 160 12 39 359 81 356 4.16e-19 88.2
MS.gene09827.t1 AT4G08260 27.698 278 112 10 70 345 18 208 5.39e-19 85.1
MS.gene09827.t1 AT3G17250 28.205 273 141 10 62 314 142 379 6.07e-19 88.2
MS.gene09827.t1 AT1G22280 28.037 321 161 13 29 343 28 284 8.79e-19 85.9
MS.gene09827.t1 AT4G26080 26.398 322 183 10 54 361 153 434 1.19e-18 87.4
MS.gene09827.t1 AT3G15260 29.964 277 127 11 71 343 73 286 1.82e-18 85.1
MS.gene09827.t1 AT3G15260 29.964 277 127 11 71 343 73 286 1.82e-18 85.1
MS.gene09827.t1 AT1G22280 28.165 316 161 12 29 343 28 278 2.72e-18 84.3
MS.gene09827.t1 AT3G62260 29.839 248 135 9 71 309 27 244 3.24e-18 84.3
MS.gene09827.t1 AT5G51760 27.500 240 123 8 71 291 114 321 3.26e-18 85.5
MS.gene09827.t1 AT5G51760 27.500 240 123 8 71 291 144 351 4.40e-18 85.5
MS.gene09827.t1 AT2G40860 28.114 281 145 8 71 347 423 650 5.84e-18 85.9
MS.gene09827.t1 AT2G40860 28.114 281 145 8 71 347 325 552 6.25e-18 85.5
MS.gene09827.t1 AT3G62260 29.839 248 135 9 71 309 117 334 1.17e-17 84.0
MS.gene09827.t1 AT3G62260 29.839 248 135 9 71 309 116 333 1.21e-17 84.0
MS.gene09827.t1 AT3G16800 28.763 299 152 12 70 347 92 350 1.58e-17 83.2
MS.gene09827.t1 AT3G16800 28.763 299 152 12 70 347 92 350 1.58e-17 83.2
MS.gene09827.t1 AT3G16800 28.763 299 152 12 70 347 92 350 1.58e-17 83.2
MS.gene09827.t1 AT2G34740 28.571 273 149 10 44 314 96 324 1.88e-17 82.8
MS.gene09827.t1 AT2G25070 25.532 282 142 8 52 292 33 287 3.40e-17 82.4
MS.gene09827.t1 AT2G25070 25.532 282 142 8 52 292 33 287 3.40e-17 82.4
MS.gene09827.t1 AT5G59220 28.821 229 122 6 71 292 148 342 5.08e-17 82.4
MS.gene09827.t1 AT3G16800 30.252 238 116 9 122 347 56 255 5.46e-17 80.1
MS.gene09827.t1 AT3G16800 30.252 238 116 9 122 347 56 255 5.46e-17 80.1
MS.gene09827.t1 AT4G28400 29.091 220 109 8 66 281 62 238 6.03e-17 80.1
MS.gene09827.t1 AT1G72770 27.692 260 120 5 60 291 227 446 1.72e-16 81.3
MS.gene09827.t1 AT1G72770 27.692 260 120 5 60 291 227 446 1.72e-16 81.3
MS.gene09827.t1 AT1G72770 27.692 260 120 5 60 291 227 446 1.72e-16 81.3
MS.gene09827.t1 AT1G17550 26.923 312 150 12 71 348 237 504 3.19e-16 80.5
MS.gene09827.t1 AT1G17550 26.923 312 150 12 71 348 237 504 3.19e-16 80.5
MS.gene09827.t1 AT2G40860 27.823 248 138 7 71 311 423 636 3.36e-16 80.5
MS.gene09827.t1 AT2G34740 28.870 239 125 9 44 281 110 304 6.84e-16 78.2
MS.gene09827.t1 AT2G34740 28.870 239 125 9 44 281 92 286 7.22e-16 77.8
MS.gene09827.t1 AT5G27930 28.333 300 151 14 71 344 92 353 3.34e-15 76.6
MS.gene09827.t1 AT5G27930 28.333 300 151 14 71 344 92 353 3.34e-15 76.6
MS.gene09827.t1 AT1G18030 28.352 261 130 9 72 311 110 334 3.71e-15 76.3
MS.gene09827.t1 AT3G11410 24.706 255 133 7 71 308 137 349 4.07e-15 76.6
MS.gene09827.t1 AT3G05640 28.315 279 151 13 71 326 93 345 3.24e-14 73.6
MS.gene09827.t1 AT3G05640 28.315 279 151 13 71 326 93 345 3.24e-14 73.6
MS.gene09827.t1 AT3G05640 28.315 279 151 13 71 326 93 345 3.24e-14 73.6
MS.gene09827.t1 AT1G34750 28.226 248 127 9 38 281 37 237 3.47e-14 72.0
MS.gene09827.t1 AT5G26010 26.346 353 201 13 11 348 19 327 1.07e-13 71.6
MS.gene09827.t1 AT4G32950 26.351 296 166 12 64 348 65 319 1.10e-12 68.6

Find 82 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTATGAGTTCTGATTATT+TGG 0.094977 7.1:-7454755 MS.gene09827:CDS
TCTTTGCTTCTGATGGTTTA+TGG 0.141459 7.1:-7453128 MS.gene09827:CDS
TCACTCCTTGTTCAATCTTT+TGG 0.144007 7.1:+7452890 None:intergenic
GATTTGGGAAACCATCTTTA+TGG 0.196034 7.1:-7454844 MS.gene09827:CDS
GGTCCTCAAGGAACCTTTAT+AGG 0.223798 7.1:-7454733 MS.gene09827:CDS
CTTTGCTTCTGATGGTTTAT+GGG 0.228766 7.1:-7453127 MS.gene09827:CDS
TGAGAGCATACTCTTGAAAT+TGG 0.253266 7.1:+7454651 None:intergenic
ACTGAGAATTGGCTTGAAAA+AGG 0.264897 7.1:+7453203 None:intergenic
GAGCTATTATCAATCAGTTT+TGG 0.288253 7.1:+7452820 None:intergenic
ATTGTTATGGTACAAGGATT+TGG 0.289189 7.1:-7454860 MS.gene09827:CDS
TGAAGAAAGCAGAATTTAAC+AGG 0.297447 7.1:-7453260 MS.gene09827:CDS
TTGTTATGGTACAAGGATTT+GGG 0.311993 7.1:-7454859 MS.gene09827:CDS
AAGATGAGAAATTGATCTTC+AGG 0.326898 7.1:+7453147 None:intergenic
ACCATCATAAACACCTATAA+AGG 0.367844 7.1:+7454720 None:intergenic
AACCACAATCTGTGAATCAT+AGG 0.369310 7.1:+7453907 None:intergenic
CCTATGAGTTCTGATTATTT+GGG 0.385684 7.1:-7454754 MS.gene09827:CDS
TTTCTCATCTTTGCTTCTGA+TGG 0.394754 7.1:-7453135 MS.gene09827:CDS
ATCTGCTGGTACATGTTGTT+TGG 0.408579 7.1:-7454095 MS.gene09827:CDS
TTGAAAATTCACCATAAAGA+TGG 0.408650 7.1:+7454833 None:intergenic
AATTCAAGCAAATAGTTCAT+TGG 0.412793 7.1:-7454803 MS.gene09827:CDS
GAAGAGTGAGGAAGGGAACA+AGG 0.421093 7.1:-7454009 MS.gene09827:CDS
TTTCAGAAAAGGTTATCAAA+AGG 0.431288 7.1:-7454189 MS.gene09827:CDS
TGATTGATAATAGCTCTCTA+TGG 0.431364 7.1:-7452813 MS.gene09827:CDS
GGAGACTCAAGGGCTGTGTT+AGG 0.432476 7.1:-7454031 MS.gene09827:CDS
GGAAAGTTGATGGATTGTTA+TGG 0.432672 7.1:-7454873 MS.gene09827:CDS
GATGGCTCACTACTGAGAAT+TGG 0.433229 7.1:+7453192 None:intergenic
GATCGTAGCCAACTTGAATC+AGG 0.435753 7.1:-7454778 MS.gene09827:CDS
TAACGATATTCACAGCTACT+TGG 0.443990 7.1:+7453091 None:intergenic
CTTCAGATATGCATCACCTA+TGG 0.450543 7.1:+7453278 None:intergenic
TGATGGATTGTTATGGTACA+AGG 0.456025 7.1:-7454866 MS.gene09827:CDS
GCTGGTACATGTTGTTTGGC+AGG 0.456613 7.1:-7454091 MS.gene09827:CDS
TTCAGAAAAGGTTATCAAAA+GGG 0.466769 7.1:-7454188 MS.gene09827:CDS
AGATCAAGGGATTTCAGAAA+AGG 0.471446 7.1:-7454200 MS.gene09827:CDS
CACTCTGTTTGGCGTGTGAA+AGG 0.474473 7.1:-7453878 MS.gene09827:CDS
CCCAAATAATCAGAACTCAT+AGG 0.475948 7.1:+7454754 None:intergenic
TGTGTTAGGAAGAGTGAGGA+AGG 0.477652 7.1:-7454017 MS.gene09827:CDS
TGGTTATGAAACACTCTGTT+TGG 0.490832 7.1:-7453889 MS.gene09827:CDS
AAGAGTGAGGAAGGGAACAA+GGG 0.493346 7.1:-7454008 MS.gene09827:CDS
TGAGAAATTGATCTTCAGGT+TGG 0.496104 7.1:+7453151 None:intergenic
GATGTGAAAGGGAAAGTTGA+TGG 0.502197 7.1:-7454883 MS.gene09827:CDS
ACCTTTATAGGTGTTTATGA+TGG 0.502488 7.1:-7454721 MS.gene09827:CDS
TTGCAGGTTTCAAGATCCAT+AGG 0.507189 7.1:-7453294 MS.gene09827:intron
GGTGGTGATGGAGATGTGAA+AGG 0.507401 7.1:-7454895 MS.gene09827:CDS
CTGCCATCTCTGATTGAAAG+AGG 0.518398 7.1:+7452784 None:intergenic
GAAACGAAGCTTACATTGCG+TGG 0.519390 7.1:+7453060 None:intergenic
CTCTTTCAATCAGAGATGGC+AGG 0.520547 7.1:-7452783 MS.gene09827:CDS
TCAACTGTGGAGGGTGGTGA+TGG 0.527360 7.1:-7454907 MS.gene09827:CDS
TCCCTATGATTCACAGATTG+TGG 0.527683 7.1:-7453909 MS.gene09827:CDS
ATAGGTGTTTATGATGGTCA+TGG 0.527745 7.1:-7454715 MS.gene09827:CDS
AAACTGAGAGAGATGATGTT+CGG 0.531123 7.1:-7453940 MS.gene09827:CDS
CTGGTACATGTTGTTTGGCA+GGG 0.535327 7.1:-7454090 MS.gene09827:CDS
TCAAGCAAATAGTTCATTGG+AGG 0.537174 7.1:-7454800 MS.gene09827:CDS
TATCTATGACTATATCATGC+TGG 0.539611 7.1:-7454933 None:intergenic
TCTGATTATTTGGGTCCTCA+AGG 0.548992 7.1:-7454745 MS.gene09827:CDS
GCGTGTGAAAGGCATCATAC+AGG 0.551663 7.1:-7453867 MS.gene09827:intron
TGTCTCTTGTGAAGAAGCAA+TGG 0.558482 7.1:-7454138 MS.gene09827:CDS
AGTCTAAACTTCTGTGGCAG+AGG 0.558697 7.1:+7453234 None:intergenic
GTGGTGATGGAGATGTGAAA+GGG 0.558872 7.1:-7454894 MS.gene09827:CDS
TTGCAAATGCAGGAGACTCA+AGG 0.563487 7.1:-7454042 MS.gene09827:CDS
TCTCCTCTTTCAATCAGAGA+TGG 0.566031 7.1:-7452787 MS.gene09827:CDS
TCATAGGTCCTGATTCAAGT+TGG 0.579655 7.1:+7454770 None:intergenic
CAATTACTGTAATATCATCA+TGG 0.580958 7.1:+7452857 None:intergenic
ACCACAATCTGTGAATCATA+GGG 0.581742 7.1:+7453908 None:intergenic
TGCAAATGCAGGAGACTCAA+GGG 0.586962 7.1:-7454041 MS.gene09827:CDS
TGCTGGAAATCAACTGTGGA+GGG 0.596448 7.1:-7454916 MS.gene09827:CDS
TCAGGTAGTCTAAACTTCTG+TGG 0.603011 7.1:+7453228 None:intergenic
ATGCTGTATATTGCAAATGC+AGG 0.610667 7.1:-7454052 MS.gene09827:CDS
AAACCACAGATAGCATCTGC+TGG 0.614223 7.1:-7454109 MS.gene09827:CDS
GACCTCCAAAAGATTGAACA+AGG 0.625989 7.1:-7452895 MS.gene09827:CDS
TTGGCAGGGATAATTTGCAA+TGG 0.628153 7.1:-7454076 MS.gene09827:CDS
AAAAGATTGAACAAGGAGTG+AGG 0.629700 7.1:-7452888 MS.gene09827:CDS
ATGCTGGAAATCAACTGTGG+AGG 0.664898 7.1:-7454917 MS.gene09827:CDS
ATCATGCTGGAAATCAACTG+TGG 0.668033 7.1:-7454920 MS.gene09827:CDS
TCATGTAACAGGGAATAGCA+AGG 0.668087 7.1:-7452975 MS.gene09827:intron
GTGTTAGGAAGAGTGAGGAA+GGG 0.687678 7.1:-7454016 MS.gene09827:CDS
GTACCAGCAGATGCTATCTG+TGG 0.690814 7.1:+7454106 None:intergenic
ACACCTATAAAGGTTCCTTG+AGG 0.699526 7.1:+7454730 None:intergenic
GGTGTTTATGATGGTCATGG+TGG 0.701467 7.1:-7454712 MS.gene09827:CDS
TGGAAATCAACTGTGGAGGG+TGG 0.718714 7.1:-7454913 MS.gene09827:CDS
GGGCTGTGTTAGGAAGAGTG+AGG 0.729065 7.1:-7454021 MS.gene09827:CDS
GAAGAAAGCAGAATTTAACA+GGG 0.732756 7.1:-7453259 MS.gene09827:CDS
TGTAACAGGGAATAGCAAGG+AGG 0.777684 7.1:-7452972 MS.gene09827:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAAATAAGATTTCT+AGG + chr7.1:7454320-7454339 None:intergenic 10.0%
!!! TTTTTTTTTAAGTTTCTATA+TGG - chr7.1:7454330-7454349 MS.gene09827:intron 10.0%
!!! CTTTTATTACAAACATATAT+TGG - chr7.1:7453069-7453088 MS.gene09827:intron 15.0%
!!! TTTATTACTAAGTATGATTT+TGG - chr7.1:7453882-7453901 MS.gene09827:CDS 15.0%
!! AAATCATCATATAAGAATAC+CGG + chr7.1:7453443-7453462 None:intergenic 20.0%
!! ACAAACATATATTGGAAATA+TGG - chr7.1:7453077-7453096 MS.gene09827:CDS 20.0%
!! ACAAATCATAACAAGTTAAT+TGG + chr7.1:7453923-7453942 None:intergenic 20.0%
!! ATTATTGGTATATAAAACAC+CGG - chr7.1:7453421-7453440 MS.gene09827:intron 20.0%
!! TATGATTGAAATTATAGAGT+AGG - chr7.1:7453957-7453976 MS.gene09827:CDS 20.0%
!! TTATATACCAATAATTACAG+CGG + chr7.1:7453416-7453435 None:intergenic 20.0%
!!! AGATTTCTAGGTAATATTAA+CGG + chr7.1:7454308-7454327 None:intergenic 20.0%
!!! ATTTTATGAATTGATACTGA+TGG + chr7.1:7454525-7454544 None:intergenic 20.0%
!!! TTTTTTTTTGTGTGTAAATC+AGG - chr7.1:7453461-7453480 MS.gene09827:intron 20.0%
! AAGTTCTGTTAACACAAAAT+TGG + chr7.1:7454378-7454397 None:intergenic 25.0%
! AATTCAAGCAAATAGTTCAT+TGG - chr7.1:7452893-7452912 MS.gene09827:CDS 25.0%
! ACAAACTAATTGGTAAACTA+AGG - chr7.1:7453992-7454011 MS.gene09827:CDS 25.0%
! CAAATCTTTCAGTATATGTT+CGG + chr7.1:7453286-7453305 None:intergenic 25.0%
! CAATTACTGTAATATCATCA+TGG + chr7.1:7454842-7454861 None:intergenic 25.0%
! CTATAATTTCAATCATACAG+TGG + chr7.1:7453954-7453973 None:intergenic 25.0%
! TAGTTGGATATAAAGTTACT+TGG + chr7.1:7453147-7453166 None:intergenic 25.0%
! TTCAGAAAAGGTTATCAAAA+GGG - chr7.1:7453508-7453527 MS.gene09827:intron 25.0%
! TTCGTTTCTGTCAAAATTAA+AGG - chr7.1:7454651-7454670 MS.gene09827:intron 25.0%
! TTGAAAATTCACCATAAAGA+TGG + chr7.1:7452866-7452885 None:intergenic 25.0%
! TTTCAGAAAAGGTTATCAAA+AGG - chr7.1:7453507-7453526 MS.gene09827:intron 25.0%
!! CATATGTTTTTCTTATGCAA+CGG - chr7.1:7454089-7454108 MS.gene09827:CDS 25.0%
!! CGTAGTTTTTGTCAAAATTA+CGG + chr7.1:7453220-7453239 None:intergenic 25.0%
!! TCTTTATGGTGAATTTTCAA+TGG - chr7.1:7452866-7452885 MS.gene09827:CDS 25.0%
!!! TAAAGTTACTTGGTTTTTCT+AGG + chr7.1:7453137-7453156 None:intergenic 25.0%
!!! TTTCTGAAACAGTTGTAAAA+TGG - chr7.1:7453381-7453400 MS.gene09827:intron 25.0%
AAGATGAGAAATTGATCTTC+AGG + chr7.1:7454552-7454571 None:intergenic 30.0%
ACAACTATGATTCATGTAAC+AGG - chr7.1:7454710-7454729 MS.gene09827:CDS 30.0%
ACCATCATAAACACCTATAA+AGG + chr7.1:7452979-7452998 None:intergenic 30.0%
ACCTTTATAGGTGTTTATGA+TGG - chr7.1:7452975-7452994 MS.gene09827:intron 30.0%
ACTCTTGTGATTATGGAAAA+AGG + chr7.1:7453195-7453214 None:intergenic 30.0%
AGTTTGATCTTATAACCTCA+AGG - chr7.1:7453342-7453361 MS.gene09827:intron 30.0%
ATTAGCTGCAACAAACTAAT+TGG - chr7.1:7453982-7454001 MS.gene09827:CDS 30.0%
ATTGTTATGGTACAAGGATT+TGG - chr7.1:7452836-7452855 MS.gene09827:CDS 30.0%
CAACTATGATTCATGTAACA+GGG - chr7.1:7454711-7454730 MS.gene09827:CDS 30.0%
CACAAAATTGGAGTAACATA+TGG + chr7.1:7454366-7454385 None:intergenic 30.0%
GAAGAAAGCAGAATTTAACA+GGG - chr7.1:7454437-7454456 MS.gene09827:intron 30.0%
GAATCGTAGTTAAATGTAGT+TGG - chr7.1:7454197-7454216 MS.gene09827:CDS 30.0%
GCATAAGAAAAACATATGCT+GGG + chr7.1:7454087-7454106 None:intergenic 30.0%
GTTTGATCTTATAACCTCAA+GGG - chr7.1:7453343-7453362 MS.gene09827:intron 30.0%
TGAAGAAAGCAGAATTTAAC+AGG - chr7.1:7454436-7454455 MS.gene09827:intron 30.0%
TGCATAAGAAAAACATATGC+TGG + chr7.1:7454088-7454107 None:intergenic 30.0%
TTGTTATGGTACAAGGATTT+GGG - chr7.1:7452837-7452856 MS.gene09827:CDS 30.0%
! AAAAACTCTGATAGTGTTTC+AGG - chr7.1:7454255-7454274 MS.gene09827:intron 30.0%
! ACCTATGAGTTCTGATTATT+TGG - chr7.1:7452941-7452960 MS.gene09827:CDS 30.0%
! CCTATGAGTTCTGATTATTT+GGG - chr7.1:7452942-7452961 MS.gene09827:CDS 30.0%
! GAGCTATTATCAATCAGTTT+TGG + chr7.1:7454879-7454898 None:intergenic 30.0%
! TGATTGATAATAGCTCTCTA+TGG - chr7.1:7454883-7454902 MS.gene09827:CDS 30.0%
!!! TTAACAGAACTTGTTTTTGC+AGG - chr7.1:7454386-7454405 MS.gene09827:intron 30.0%
AAAAGATTGAACAAGGAGTG+AGG - chr7.1:7454808-7454827 MS.gene09827:CDS 35.0%
AAACTGAGAGAGATGATGTT+CGG - chr7.1:7453756-7453775 MS.gene09827:intron 35.0%
AACCACAATCTGTGAATCAT+AGG + chr7.1:7453792-7453811 None:intergenic 35.0%
AACCTTCAACCAAATGATTG+CGG - chr7.1:7454122-7454141 MS.gene09827:CDS 35.0%
ACCACAATCTGTGAATCATA+GGG + chr7.1:7453791-7453810 None:intergenic 35.0%
AGAAAAACATATGCTGGGAA+AGG + chr7.1:7454082-7454101 None:intergenic 35.0%
AGATCAAGGGATTTCAGAAA+AGG - chr7.1:7453496-7453515 MS.gene09827:intron 35.0%
ATAGGTGTTTATGATGGTCA+TGG - chr7.1:7452981-7453000 MS.gene09827:intron 35.0%
ATCAAACTATTGCCAACTCT+AGG + chr7.1:7453330-7453349 None:intergenic 35.0%
ATGCTGTATATTGCAAATGC+AGG - chr7.1:7453644-7453663 MS.gene09827:intron 35.0%
CATCATACAGGTACAAACTT+GGG - chr7.1:7453841-7453860 MS.gene09827:intron 35.0%
CCAAACATGCAGTTAATAGT+TGG + chr7.1:7453163-7453182 None:intergenic 35.0%
CCAACTATTAACTGCATGTT+TGG - chr7.1:7453160-7453179 MS.gene09827:CDS 35.0%
CCCAAATAATCAGAACTCAT+AGG + chr7.1:7452945-7452964 None:intergenic 35.0%
CTTTGCTTCTGATGGTTTAT+GGG - chr7.1:7454569-7454588 MS.gene09827:intron 35.0%
GATTTGGGAAACCATCTTTA+TGG - chr7.1:7452852-7452871 MS.gene09827:CDS 35.0%
GTTAGTACCGCTGTAATTAT+TGG - chr7.1:7453406-7453425 MS.gene09827:intron 35.0%
TAACGATATTCACAGCTACT+TGG + chr7.1:7454608-7454627 None:intergenic 35.0%
TCAAGCAAATAGTTCATTGG+AGG - chr7.1:7452896-7452915 MS.gene09827:CDS 35.0%
TCTTTGCTTCTGATGGTTTA+TGG - chr7.1:7454568-7454587 MS.gene09827:intron 35.0%
TGAGAAATTGATCTTCAGGT+TGG + chr7.1:7454548-7454567 None:intergenic 35.0%
TGGTTATGAAACACTCTGTT+TGG - chr7.1:7453807-7453826 MS.gene09827:intron 35.0%
TTTCTCATCTTTGCTTCTGA+TGG - chr7.1:7454561-7454580 MS.gene09827:intron 35.0%
! GTTTTACAGCTGAAGATCAA+GGG - chr7.1:7453483-7453502 MS.gene09827:intron 35.0%
! TCACTCCTTGTTCAATCTTT+TGG + chr7.1:7454809-7454828 None:intergenic 35.0%
! TGAGAGCATACTCTTGAAAT+TGG + chr7.1:7453048-7453067 None:intergenic 35.0%
! TTTTTCTTATGCAACGGTCA+AGG - chr7.1:7454095-7454114 MS.gene09827:CDS 35.0%
!! ACTGAGAATTGGCTTGAAAA+AGG + chr7.1:7454496-7454515 None:intergenic 35.0%
!! AGTTGGTAGCCTTATAATTG+CGG - chr7.1:7454214-7454233 MS.gene09827:CDS 35.0%
!! ATTGGCTTGAAAAAGGTTTC+AGG + chr7.1:7454489-7454508 None:intergenic 35.0%
!! GGAAAGTTGATGGATTGTTA+TGG - chr7.1:7452823-7452842 MS.gene09827:CDS 35.0%
!! TGATGGATTGTTATGGTACA+AGG - chr7.1:7452830-7452849 MS.gene09827:CDS 35.0%
ACACCTATAAAGGTTCCTTG+AGG + chr7.1:7452969-7452988 None:intergenic 40.0%
ACCTTCAACCAAATGATTGC+GGG - chr7.1:7454123-7454142 MS.gene09827:CDS 40.0%
ATCATGCTGGAAATCAACTG+TGG - chr7.1:7452776-7452795 MS.gene09827:CDS 40.0%
ATCTGCTGGTACATGTTGTT+TGG - chr7.1:7453601-7453620 MS.gene09827:intron 40.0%
ATCTTATAACCTCAAGGGAC+GGG - chr7.1:7453348-7453367 MS.gene09827:intron 40.0%
CTTCAGATATGCATCACCTA+TGG + chr7.1:7454421-7454440 None:intergenic 40.0%
GACCTCCAAAAGATTGAACA+AGG - chr7.1:7454801-7454820 MS.gene09827:CDS 40.0%
GATCTTATAACCTCAAGGGA+CGG - chr7.1:7453347-7453366 MS.gene09827:intron 40.0%
GATGTGAAAGGGAAAGTTGA+TGG - chr7.1:7452813-7452832 MS.gene09827:CDS 40.0%
GCATCATACAGGTACAAACT+TGG - chr7.1:7453840-7453859 MS.gene09827:intron 40.0%
TCAGGTAGTCTAAACTTCTG+TGG + chr7.1:7454471-7454490 None:intergenic 40.0%
TCATAGGTCCTGATTCAAGT+TGG + chr7.1:7452929-7452948 None:intergenic 40.0%
TCATGTAACAGGGAATAGCA+AGG - chr7.1:7454721-7454740 MS.gene09827:CDS 40.0%
TCCCTATGATTCACAGATTG+TGG - chr7.1:7453787-7453806 MS.gene09827:intron 40.0%
TCTCCTCTTTCAATCAGAGA+TGG - chr7.1:7454909-7454928 MS.gene09827:CDS 40.0%
TCTGATTATTTGGGTCCTCA+AGG - chr7.1:7452951-7452970 MS.gene09827:CDS 40.0%
TGTCTCTTGTGAAGAAGCAA+TGG - chr7.1:7453558-7453577 MS.gene09827:intron 40.0%
TTGCAGGTTTCAAGATCCAT+AGG - chr7.1:7454402-7454421 MS.gene09827:intron 40.0%
TTTCTGCGACCGCAATTATA+AGG + chr7.1:7454226-7454245 None:intergenic 40.0%
! AGATTTGTTTCCTGTCCATG+AGG - chr7.1:7453299-7453318 MS.gene09827:intron 40.0%
! CTCCTTGTTCAATCTTTTGG+AGG + chr7.1:7454806-7454825 None:intergenic 40.0%
! GCATTTTCTGCAACAGATGA+TGG - chr7.1:7453530-7453549 MS.gene09827:intron 40.0%
! GGTTTTACAGCTGAAGATCA+AGG - chr7.1:7453482-7453501 MS.gene09827:intron 40.0%
! TTGGCAGGGATAATTTGCAA+TGG - chr7.1:7453620-7453639 MS.gene09827:intron 40.0%
AAACCACAGATAGCATCTGC+TGG - chr7.1:7453587-7453606 MS.gene09827:intron 45.0%
AAGAGTGAGGAAGGGAACAA+GGG - chr7.1:7453688-7453707 MS.gene09827:intron 45.0%
ACGCGGCAAGGTTTAAATTG+TGG - chr7.1:7454146-7454165 MS.gene09827:CDS 45.0%
AGTCTAAACTTCTGTGGCAG+AGG + chr7.1:7454465-7454484 None:intergenic 45.0%
ATGCTGGAAATCAACTGTGG+AGG - chr7.1:7452779-7452798 MS.gene09827:CDS 45.0%
CTCTTTCAATCAGAGATGGC+AGG - chr7.1:7454913-7454932 MS.gene09827:CDS 45.0%
CTGCCATCTCTGATTGAAAG+AGG + chr7.1:7454915-7454934 None:intergenic 45.0%
GAAACGAAGCTTACATTGCG+TGG + chr7.1:7454639-7454658 None:intergenic 45.0%
GATCGTAGCCAACTTGAATC+AGG - chr7.1:7452918-7452937 MS.gene09827:CDS 45.0%
GATGGCTCACTACTGAGAAT+TGG + chr7.1:7454507-7454526 None:intergenic 45.0%
GGTCCTCAAGGAACCTTTAT+AGG - chr7.1:7452963-7452982 MS.gene09827:CDS 45.0%
GGTGTTTATGATGGTCATGG+TGG - chr7.1:7452984-7453003 MS.gene09827:intron 45.0%
GTGTTAGGAAGAGTGAGGAA+GGG - chr7.1:7453680-7453699 MS.gene09827:intron 45.0%
TACGGCGACTCTTGTGATTA+TGG + chr7.1:7453202-7453221 None:intergenic 45.0%
TCCCGCAATCATTTGGTTGA+AGG + chr7.1:7454127-7454146 None:intergenic 45.0%
TCTTATAACCTCAAGGGACG+GGG - chr7.1:7453349-7453368 MS.gene09827:intron 45.0%
TGCAAATGCAGGAGACTCAA+GGG - chr7.1:7453655-7453674 MS.gene09827:intron 45.0%
TGCTGGAAATCAACTGTGGA+GGG - chr7.1:7452780-7452799 MS.gene09827:CDS 45.0%
TGTAACAGGGAATAGCAAGG+AGG - chr7.1:7454724-7454743 MS.gene09827:CDS 45.0%
TGTGTTAGGAAGAGTGAGGA+AGG - chr7.1:7453679-7453698 MS.gene09827:intron 45.0%
TTGCAAATGCAGGAGACTCA+AGG - chr7.1:7453654-7453673 MS.gene09827:intron 45.0%
! CTGGTACATGTTGTTTGGCA+GGG - chr7.1:7453606-7453625 MS.gene09827:intron 45.0%
!! GTGGTGATGGAGATGTGAAA+GGG - chr7.1:7452802-7452821 MS.gene09827:CDS 45.0%
AACCAAATGATTGCGGGACG+CGG - chr7.1:7454129-7454148 MS.gene09827:CDS 50.0%
AATTTGAACCCCGTCCCTTG+AGG + chr7.1:7453360-7453379 None:intergenic 50.0%
CAACTCTAGGCAACACCTCA+TGG + chr7.1:7453317-7453336 None:intergenic 50.0%
CACTCTGTTTGGCGTGTGAA+AGG - chr7.1:7453818-7453837 MS.gene09827:intron 50.0%
GAAGAGTGAGGAAGGGAACA+AGG - chr7.1:7453687-7453706 MS.gene09827:intron 50.0%
GTACCAGCAGATGCTATCTG+TGG + chr7.1:7453593-7453612 None:intergenic 50.0%
TGGAAATCAACTGTGGAGGG+TGG - chr7.1:7452783-7452802 MS.gene09827:CDS 50.0%
! GCTGGTACATGTTGTTTGGC+AGG - chr7.1:7453605-7453624 MS.gene09827:intron 50.0%
!! CATGAGGTGTTGCCTAGAGT+TGG - chr7.1:7453315-7453334 MS.gene09827:intron 50.0%
!! GCGTGTGAAAGGCATCATAC+AGG - chr7.1:7453829-7453848 MS.gene09827:intron 50.0%
!! GGTGGTGATGGAGATGTGAA+AGG - chr7.1:7452801-7452820 MS.gene09827:CDS 50.0%
CTAGGCAACACCTCATGGAC+AGG + chr7.1:7453312-7453331 None:intergenic 55.0%
GGAGACTCAAGGGCTGTGTT+AGG - chr7.1:7453665-7453684 MS.gene09827:intron 55.0%
GGGCTGTGTTAGGAAGAGTG+AGG - chr7.1:7453675-7453694 MS.gene09827:intron 55.0%
TCAACTGTGGAGGGTGGTGA+TGG - chr7.1:7452789-7452808 MS.gene09827:CDS 55.0%
AATGATTGCGGGACGCGGCA+AGG - chr7.1:7454134-7454153 MS.gene09827:CDS 60.0%
TAGTCTTCGCAGCTGCGTGC+AGG + chr7.1:7454022-7454041 None:intergenic 60.0%
TGCCGCGTCCCGCAATCATT+TGG + chr7.1:7454134-7454153 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 7452768 7454950 7452768 ID=MS.gene09827
chr7.1 mRNA 7452768 7454950 7452768 ID=MS.gene09827.t1;Parent=MS.gene09827
chr7.1 exon 7454662 7454950 7454662 ID=MS.gene09827.t1.exon1;Parent=MS.gene09827.t1
chr7.1 CDS 7454662 7454950 7454662 ID=cds.MS.gene09827.t1;Parent=MS.gene09827.t1
chr7.1 exon 7453868 7454235 7453868 ID=MS.gene09827.t1.exon2;Parent=MS.gene09827.t1
chr7.1 CDS 7453868 7454235 7453868 ID=cds.MS.gene09827.t1;Parent=MS.gene09827.t1
chr7.1 exon 7453074 7453310 7453074 ID=MS.gene09827.t1.exon3;Parent=MS.gene09827.t1
chr7.1 CDS 7453074 7453310 7453074 ID=cds.MS.gene09827.t1;Parent=MS.gene09827.t1
chr7.1 exon 7452768 7452986 7452768 ID=MS.gene09827.t1.exon4;Parent=MS.gene09827.t1
chr7.1 CDS 7452768 7452986 7452768 ID=cds.MS.gene09827.t1;Parent=MS.gene09827.t1
Gene Sequence

>MS.gene09827

ATGACTATATCATGCTGGAAATCAACTGTGGAGGGTGGTGATGGAGATGTGAAAGGGAAAGTTGATGGATTGTTATGGTACAAGGATTTGGGAAACCATCTTTATGGTGAATTTTCAATGGCTGTAATTCAAGCAAATAGTTCATTGGAGGATCGTAGCCAACTTGAATCAGGACCTATGAGTTCTGATTATTTGGGTCCTCAAGGAACCTTTATAGGTGTTTATGATGGTCATGGTGGAACTGCAGCTGCTCAGTTTGTTAATGACAATCTATTCTCCAATTTCAAGAGTATGCTCTCAACTTTTATTACAAACATATATTGGAAATATGGATTTGCTGTACGATGTTTTTCAATTGAATTGAATCCTAGAAAAACCAAGTAACTTTATATCCAACTATTAACTGCATGTTTGGAATCACAGTCCTTTTTCCATAATCACAAGAGTCGCCGTAATTTTGACAAAAACTACGTATATGAAGCTTTAATTGTGATTTTGTCAAAATTATCGTGATTCCGAACATATACTGAAAGATTTGTTTCCTGTCCATGAGGTGTTGCCTAGAGTTGGCAATAGTTTGATCTTATAACCTCAAGGGACGGGGTTCAAATTCTTTCTGAAACAGTTGTAAAATGGTCGTTAGTACCGCTGTAATTATTGGTATATAAAACACCGGTATTCTTATATGATGATTTTTTTTTTGTGTGTAAATCAGGTTTTACAGCTGAAGATCAAGGGATTTCAGAAAAGGTTATCAAAAGGGCATTTTCTGCAACAGATGATGGTTTTCTGTCTCTTGTGAAGAAGCAATGGCAAAGCAAACCACAGATAGCATCTGCTGGTACATGTTGTTTGGCAGGGATAATTTGCAATGGTATGCTGTATATTGCAAATGCAGGAGACTCAAGGGCTGTGTTAGGAAGAGTGAGGAAGGGAACAAGGGAAACATTAGCTGTTCAGTTATCTACTGAACACAATGTTAATATAGAAACTGAGAGAGATGATGTTCGGTCAAAGCATCCCTATGATTCACAGATTGTGGTTATGAAACACTCTGTTTGGCGTGTGAAAGGCATCATACAGGTACAAACTTGGGAGATTCATATTGCTTTTTTTTATTACTAAGTATGATTTTGGACTCTAGTAACACAACCAATTAACTTGTTATGATTTGTTATGATCTCCACTGTATGATTGAAATTATAGAGTAGGAAATTAGCTGCAACAAACTAATTGGTAAACTAAGGTATTCCTGCACGCAGCTGCGAAGACTAAACTCTCAAAGTAACTGAGATCTATTTAACAGATTGACCTTTCCCAGCATATGTTTTTCTTATGCAACGGTCAAGGATCGAACCTTCAACCAAATGATTGCGGGACGCGGCAAGGTTTAAATTGTGGTTGCAATTGCGATAGTTAATATTGTAGAGAATCGTAGTTAAATGTAGTTGGTAGCCTTATAATTGCGGTCGCAGAAACATATGAAAAAAAACTCTGATAGTGTTTCAGGTTGCAGTCTCTGAATTTTTAGAATTTGCCGTTAATATTACCTAGAAATCTTATTTTTTTTTAAGTTTCTATATGGTAAATTAAAACCATATGTTACTCCAATTTTGTGTTAACAGAACTTGTTTTTGCAGGTTTCAAGATCCATAGGTGATGCATATCTGAAGAAAGCAGAATTTAACAGGGAGCCTCTGCCACAGAAGTTTAGACTACCTGAAACCTTTTTCAAGCCAATTCTCAGTAGTGAGCCATCAGTATCAATTCATAAAATCCAACCTGAAGATCAATTTCTCATCTTTGCTTCTGATGGTTTATGGGAGCATCTTAGCAACCAAGTAGCTGTGAATATCGTTAGCAACAATCCACGCAATGTAAGCTTCGTTTCTGTCAAAATTAAAGGATGTTTTTCTTTTTCTTATTTAAAAGCTCTTTTGTGACAACTATGATTCATGTAACAGGGAATAGCAAGGAGGCTTGTGAAAGCAGCACTTAAAGAAGCAGCGAAGAAGCGAGAAATAAGATTATCAGACCTCCAAAAGATTGAACAAGGAGTGAGGAGACACTTCCATGATGATATTACAGTAATTGTTGTATATCTAAATCCAAAACTGATTGATAATAGCTCTCTATGGAGTTCTCCTCTTTCAATCAGAGATGGCAGGCATGTCAATTCCTAG
Protein sequence

>MS.gene09827.t1

MTISCWKSTVEGGDGDVKGKVDGLLWYKDLGNHLYGEFSMAVIQANSSLEDRSQLESGPMSSDYLGPQGTFIGVYDGHGGTAAAQFVNDNLFSNFKSFTAEDQGISEKVIKRAFSATDDGFLSLVKKQWQSKPQIASAGTCCLAGIICNGMLYIANAGDSRAVLGRVRKGTRETLAVQLSTEHNVNIETERDDVRSKHPYDSQIVVMKHSVWRVKGIIQVSRSIGDAYLKKAEFNREPLPQKFRLPETFFKPILSSEPSVSIHKIQPEDQFLIFASDGLWEHLSNQVAVNIVSNNPRNGIARRLVKAALKEAAKKREIRLSDLQKIEQGVRRHFHDDITVIVVYLNPKLIDNSSLWSSPLSIRDGRHVNS