Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20035.t1 | XP_003625578.2 | 98.8 | 806 | 10 | 0 | 1 | 806 | 1 | 806 | 0.00E+00 | 1552.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20035.t1 | Q9SF37 | 73.8 | 768 | 194 | 3 | 39 | 805 | 40 | 801 | 0.0e+00 | 1106.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20035.t1 | G7L1Q5 | 98.8 | 806 | 10 | 0 | 1 | 806 | 1 | 806 | 0.0e+00 | 1552.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene20035 | MS.gene36485 | PPI |
MS.gene20035 | MS.gene22500 | PPI |
MS.gene20035 | MS.gene072702 | PPI |
MS.gene20035 | MS.gene07051 | PPI |
MS.gene20035 | MS.gene58754 | PPI |
MS.gene20035 | MS.gene28807 | PPI |
MS.gene20035 | MS.gene35150 | PPI |
MS.gene20035 | MS.gene023147 | PPI |
MS.gene20035 | MS.gene58234 | PPI |
MS.gene20035 | MS.gene57751 | PPI |
MS.gene041425 | MS.gene20035 | PPI |
MS.gene20035 | MS.gene028307 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20035.t1 | MTR_7g100680 | 98.759 | 806 | 10 | 0 | 1 | 806 | 1 | 806 | 0.0 | 1653 |
MS.gene20035.t1 | MTR_7g061220 | 98.611 | 216 | 3 | 0 | 576 | 791 | 403 | 618 | 2.61e-144 | 438 |
MS.gene20035.t1 | MTR_2g437540 | 30.986 | 639 | 351 | 16 | 93 | 705 | 74 | 648 | 4.58e-93 | 310 |
MS.gene20035.t1 | MTR_4g071090 | 32.868 | 645 | 353 | 18 | 87 | 718 | 180 | 757 | 1.04e-92 | 309 |
MS.gene20035.t1 | MTR_4g096700 | 34.570 | 593 | 312 | 17 | 144 | 712 | 109 | 649 | 5.33e-90 | 300 |
MS.gene20035.t1 | MTR_8g090000 | 30.921 | 608 | 329 | 15 | 129 | 705 | 106 | 653 | 9.78e-90 | 301 |
MS.gene20035.t1 | MTR_4g122270 | 29.803 | 661 | 374 | 21 | 67 | 705 | 231 | 823 | 1.21e-86 | 295 |
MS.gene20035.t1 | MTR_4g116870 | 32.724 | 602 | 319 | 16 | 124 | 707 | 118 | 651 | 1.14e-81 | 277 |
MS.gene20035.t1 | MTR_7g109480 | 32.988 | 579 | 302 | 15 | 143 | 712 | 145 | 646 | 3.41e-81 | 275 |
MS.gene20035.t1 | MTR_2g009190 | 30.992 | 655 | 330 | 22 | 90 | 705 | 44 | 615 | 4.37e-73 | 251 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20035.t1 | AT3G09660 | 73.184 | 757 | 193 | 3 | 37 | 792 | 38 | 785 | 0.0 | 1150 |
MS.gene20035.t1 | AT3G09660 | 73.184 | 757 | 196 | 3 | 37 | 792 | 38 | 788 | 0.0 | 1149 |
MS.gene20035.t1 | AT3G09660 | 72.664 | 717 | 189 | 3 | 37 | 752 | 38 | 748 | 0.0 | 1078 |
MS.gene20035.t1 | AT2G16440 | 34.385 | 602 | 321 | 16 | 129 | 718 | 223 | 762 | 3.42e-94 | 313 |
MS.gene20035.t1 | AT5G44635 | 32.131 | 610 | 320 | 16 | 129 | 705 | 107 | 655 | 5.12e-92 | 307 |
MS.gene20035.t1 | AT5G44635 | 32.131 | 610 | 320 | 16 | 129 | 705 | 107 | 655 | 7.51e-92 | 307 |
MS.gene20035.t1 | AT1G44900 | 30.289 | 657 | 378 | 19 | 67 | 705 | 231 | 825 | 1.28e-89 | 303 |
MS.gene20035.t1 | AT1G44900 | 30.289 | 657 | 378 | 19 | 67 | 705 | 233 | 827 | 1.32e-89 | 303 |
MS.gene20035.t1 | AT5G46280 | 33.220 | 590 | 328 | 14 | 140 | 712 | 101 | 641 | 3.78e-87 | 291 |
MS.gene20035.t1 | AT5G46280 | 33.220 | 590 | 328 | 14 | 140 | 712 | 101 | 641 | 2.33e-86 | 291 |
MS.gene20035.t1 | AT5G46280 | 33.627 | 568 | 311 | 14 | 140 | 690 | 101 | 619 | 2.46e-84 | 281 |
MS.gene20035.t1 | AT4G02060 | 31.761 | 636 | 322 | 19 | 143 | 749 | 143 | 695 | 2.03e-83 | 281 |
MS.gene20035.t1 | AT4G02060 | 31.761 | 636 | 322 | 19 | 143 | 749 | 143 | 695 | 2.03e-83 | 281 |
MS.gene20035.t1 | AT2G07690 | 33.333 | 588 | 303 | 15 | 138 | 707 | 129 | 645 | 1.36e-82 | 279 |
MS.gene20035.t1 | AT2G07690 | 33.449 | 577 | 295 | 15 | 149 | 707 | 138 | 643 | 6.87e-81 | 275 |
MS.gene20035.t1 | AT2G14050 | 32.363 | 584 | 307 | 17 | 133 | 705 | 110 | 616 | 5.33e-77 | 262 |
MS.gene20035.t1 | AT2G14050 | 32.363 | 584 | 307 | 17 | 133 | 705 | 110 | 616 | 9.38e-77 | 261 |
MS.gene20035.t1 | AT5G46280 | 32.879 | 514 | 282 | 12 | 140 | 639 | 101 | 565 | 4.07e-73 | 249 |
Find 171 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATGAATTCATTCGAGTTAA+TGG | 0.108793 | 7.2:+11437177 | MS.gene20035:CDS |
CCAGCTCCGATTGCTTATTA+AGG | 0.193745 | 7.2:-11444009 | None:intergenic |
TTCAGTGCAATCATGGTTTC+AGG | 0.209947 | 7.2:-11437945 | None:intergenic |
GGGATAACTCTATCATTATT+TGG | 0.224721 | 7.2:+11440099 | MS.gene20035:CDS |
GAGCATGGGGTTGTTGATTT+TGG | 0.227811 | 7.2:+11443935 | MS.gene20035:CDS |
TCCAGCTGCCTTGCTGTTAT+AGG | 0.258403 | 7.2:-11443055 | None:intergenic |
TTCCTTGAAAGTACCTGATA+TGG | 0.261728 | 7.2:+11444167 | MS.gene20035:CDS |
GGAGATGTGGTGACGGTTAC+TGG | 0.270140 | 7.2:+11438544 | MS.gene20035:CDS |
TCTATATGCCCTTCCATCTA+TGG | 0.290785 | 7.2:+11439562 | MS.gene20035:CDS |
GGACAAGCCTGATGAACTTT+TGG | 0.293696 | 7.2:+11441793 | MS.gene20035:CDS |
TATGGACATGAGCTTGTTAA+AGG | 0.300590 | 7.2:+11439580 | MS.gene20035:CDS |
TCTAACTATACAGGCTTTAC+TGG | 0.311193 | 7.2:+11441225 | MS.gene20035:intron |
TTGCAGCTTCATGCTGGGTC+CGG | 0.318435 | 7.2:+11442530 | MS.gene20035:intron |
ATTAACAATTACATGGATAT+TGG | 0.321083 | 7.2:+11438580 | MS.gene20035:CDS |
CTCGTTGATTCATGCATTCC+TGG | 0.334719 | 7.2:+11438523 | MS.gene20035:CDS |
GAATGTTGAAGGCGTAGATT+TGG | 0.343931 | 7.2:+11442726 | MS.gene20035:CDS |
TATGATATCTGCCGCGGGCT+TGG | 0.355308 | 7.2:-11442981 | None:intergenic |
AGCTACTGTGAGGCCAGCTT+TGG | 0.357574 | 7.2:-11440456 | None:intergenic |
CAGCTCCGATTGCTTATTAA+GGG | 0.360222 | 7.2:-11444008 | None:intergenic |
CTGTGACTTTGAATTCACTA+TGG | 0.363793 | 7.2:-11439392 | None:intergenic |
CATCGCACCTGGTATGTCTT+TGG | 0.366580 | 7.2:-11444240 | None:intergenic |
GCATTCTATGGATCAGAATA+AGG | 0.366762 | 7.2:+11440134 | MS.gene20035:CDS |
TGTTTCTTGCAGCTTCATGC+TGG | 0.368557 | 7.2:+11442524 | MS.gene20035:intron |
TCGATGAAAGTATCCATATC+AGG | 0.376038 | 7.2:-11444180 | None:intergenic |
CATTAACTCGAATGAATTCA+TGG | 0.376829 | 7.2:-11437176 | None:intergenic |
TACTTATAATGACCACCAAC+AGG | 0.377981 | 7.2:-11441337 | None:intergenic |
CCATTCAAATTGCAAGTTGA+TGG | 0.379274 | 7.2:-11438248 | None:intergenic |
CGCTTGTCCAAAAGTTCATC+AGG | 0.385535 | 7.2:-11441800 | None:intergenic |
ATACCTGAGAAACGATGTTT+TGG | 0.390987 | 7.2:-11437291 | None:intergenic |
CATCAATATATTTATCATAC+AGG | 0.392077 | 7.2:-11443913 | None:intergenic |
CCTGACGGTGCTGGCTTTCA+CGG | 0.395426 | 7.2:-11438141 | None:intergenic |
AGCCGAAGCTCGAGCTCGGC+TGG | 0.401333 | 7.2:+11443093 | MS.gene20035:CDS |
GATCTGGTTCTTTAATTTCA+AGG | 0.402786 | 7.2:+11442755 | MS.gene20035:CDS |
CGGCGTACGGAGGCATTCTA+TGG | 0.403727 | 7.2:+11440122 | MS.gene20035:CDS |
AGAAGAAGTGAGGTTGAGCC+AGG | 0.408398 | 7.2:-11437239 | None:intergenic |
GTAGATTTGGGTGTAGGATC+TGG | 0.408575 | 7.2:+11442739 | MS.gene20035:CDS |
ATGCATAAGAGAGCAAGTTT+AGG | 0.412001 | 7.2:-11437750 | None:intergenic |
TGCAGCTTCATGCTGGGTCC+GGG | 0.413367 | 7.2:+11442531 | MS.gene20035:intron |
ACAGAGCAGAGGATCCGATA+TGG | 0.414379 | 7.2:+11437139 | MS.gene20035:CDS |
CGAAGAAGTTGACCAGGTAA+TGG | 0.417048 | 7.2:-11442814 | None:intergenic |
AACAAGCTCATGTCCATAGA+TGG | 0.417259 | 7.2:-11439575 | None:intergenic |
CAGCTCAGTTGGTCTAGCTT+TGG | 0.426463 | 7.2:-11439446 | None:intergenic |
TAAAATGACCTCAGAGCATC+AGG | 0.427495 | 7.2:+11441130 | MS.gene20035:CDS |
TGACAGGTGAGAAATGAATA+TGG | 0.436133 | 7.2:+11437645 | MS.gene20035:intron |
GATATTCATGTCATAGTTGT+AGG | 0.436924 | 7.2:+11440171 | MS.gene20035:CDS |
AAATATACAGTCTGGCTGAT+AGG | 0.441346 | 7.2:+11444142 | MS.gene20035:CDS |
CTGCTGCTGCTTGTAACAAC+TGG | 0.441826 | 7.2:-11440391 | None:intergenic |
AGGATTTGGCGAAATAAATC+TGG | 0.443322 | 7.2:-11439535 | None:intergenic |
AATGTTGAAGGCGTAGATTT+GGG | 0.445445 | 7.2:+11442727 | MS.gene20035:CDS |
AAAGCATAGTCATTTGTCAT+AGG | 0.449736 | 7.2:-11440491 | None:intergenic |
CCATCAACTTGCAATTTGAA+TGG | 0.452389 | 7.2:+11438248 | MS.gene20035:CDS |
GGCATATAGAGTGAAGGATT+TGG | 0.454611 | 7.2:-11439549 | None:intergenic |
CATTCAAATTGCAAGTTGAT+GGG | 0.455098 | 7.2:-11438247 | None:intergenic |
TCCTATAACAGCAAGGCAGC+TGG | 0.455519 | 7.2:+11443054 | MS.gene20035:CDS |
TATGAAAATTAAATCAAAAC+GGG | 0.458966 | 7.2:-11441765 | None:intergenic |
TGAATTCATGGAAAGTGATT+CGG | 0.459805 | 7.2:-11437164 | None:intergenic |
GTTTCTTGCAGCTTCATGCT+GGG | 0.461288 | 7.2:+11442525 | MS.gene20035:intron |
TTTCTAGGTGATCCTGGTCT+AGG | 0.462228 | 7.2:+11440362 | MS.gene20035:intron |
TAAATTCTTCAGTGCAATCA+TGG | 0.466389 | 7.2:-11437952 | None:intergenic |
TTCTATTGCAAAGGCGGGAT+TGG | 0.467185 | 7.2:+11441270 | MS.gene20035:CDS |
AGGCCAAAACATCGTTTCTC+AGG | 0.468798 | 7.2:+11437288 | MS.gene20035:CDS |
CCGTGAAAGCCAGCACCGTC+AGG | 0.472216 | 7.2:+11438141 | MS.gene20035:CDS |
CACAAGAGGCCTGACGGTGC+TGG | 0.474149 | 7.2:-11438150 | None:intergenic |
TATCATTATTTGGCGGCGTA+CGG | 0.481378 | 7.2:+11440109 | MS.gene20035:CDS |
CCTGATAGGTGCTATGGTGC+TGG | 0.483705 | 7.2:+11441073 | MS.gene20035:intron |
ATCGAAAATTTAAACAGCGT+TGG | 0.484696 | 7.2:+11444198 | MS.gene20035:CDS |
ATATGAAAATTAAATCAAAA+CGG | 0.484820 | 7.2:-11441766 | None:intergenic |
GATACAAATAGTAAAATCCT+TGG | 0.485029 | 7.2:-11439357 | None:intergenic |
GATAAATATATTGATGAGCA+TGG | 0.490221 | 7.2:+11443920 | MS.gene20035:CDS |
TGAGAGTCTTGTGAATCATC+AGG | 0.495946 | 7.2:-11439421 | None:intergenic |
TCTGCATCACAGAATGTTGA+AGG | 0.496444 | 7.2:+11442715 | MS.gene20035:CDS |
TGGTTTCAGGACAGTTATGA+AGG | 0.500816 | 7.2:-11437932 | None:intergenic |
ATCCATATCAGGTACTTTCA+AGG | 0.502711 | 7.2:-11444169 | None:intergenic |
ACGGTTACTGGAATTATTAG+AGG | 0.502723 | 7.2:+11438556 | MS.gene20035:CDS |
ATAAATATATTGATGAGCAT+GGG | 0.502837 | 7.2:+11443921 | MS.gene20035:CDS |
GTCTTGTGAATCATCAGGTA+TGG | 0.506063 | 7.2:-11439416 | None:intergenic |
AAATGCCCTTAATAAGCAAT+CGG | 0.507539 | 7.2:+11444003 | MS.gene20035:CDS |
TAGAGGAATTAACAATTACA+TGG | 0.507609 | 7.2:+11438573 | MS.gene20035:CDS |
GAGCCAGTCGTCTAGGTCAA+GGG | 0.508608 | 7.2:+11444462 | MS.gene20035:CDS |
AACAAATCAAACAGCTCAGT+TGG | 0.515399 | 7.2:-11439457 | None:intergenic |
AACAATTACATGGATATTGG+AGG | 0.515600 | 7.2:+11438583 | MS.gene20035:CDS |
CCTTAATAAGCAATCGGAGC+TGG | 0.515942 | 7.2:+11444009 | MS.gene20035:CDS |
GCCTATGGAAGAAGAAAAGA+AGG | 0.516013 | 7.2:-11437269 | None:intergenic |
TGGGTCCGGGCAACACTCAC+AGG | 0.519091 | 7.2:+11442544 | MS.gene20035:CDS |
GGTAACGCCACAACCAAAGC+TGG | 0.525016 | 7.2:+11440443 | MS.gene20035:CDS |
GCATTTCCTGATAGGTGCTA+TGG | 0.525346 | 7.2:+11441067 | MS.gene20035:intron |
GAGAGTAGAAATAACGGCTC+AGG | 0.525362 | 7.2:+11443120 | MS.gene20035:CDS |
AGATGCCTGTGAGTGTTGCC+CGG | 0.525723 | 7.2:-11442549 | None:intergenic |
GTCCAGCCGAGCTCGAGCTT+CGG | 0.526288 | 7.2:-11443095 | None:intergenic |
TGTGAGGCCAGCTTTGGTTG+TGG | 0.530730 | 7.2:-11440450 | None:intergenic |
AAACTCATTTCTACCACAAG+AGG | 0.532373 | 7.2:-11438164 | None:intergenic |
GATCACAATGTTTCTGCTGA+TGG | 0.533641 | 7.2:+11443028 | MS.gene20035:CDS |
GGAGCCAGTCGTCTAGGTCA+AGG | 0.534034 | 7.2:+11444461 | MS.gene20035:CDS |
CATGAGTGTTGCCGTTCATA+CGG | 0.534956 | 7.2:+11437770 | MS.gene20035:CDS |
GGCAGCTGGAAAGTCTAGTA+AGG | 0.538296 | 7.2:+11443068 | MS.gene20035:CDS |
GAAGGCGTAGATTTGGGTGT+AGG | 0.539828 | 7.2:+11442733 | MS.gene20035:CDS |
AGGACGAGTGCCTCGAACAG+TGG | 0.539875 | 7.2:+11438480 | MS.gene20035:CDS |
GTGAAATTTGCAGAGGAGCA+CGG | 0.541354 | 7.2:+11439511 | MS.gene20035:CDS |
TGTGTTTCTATTGCAAAGGC+GGG | 0.541611 | 7.2:+11441265 | MS.gene20035:CDS |
CAAGGAGTTATGTCTTTCCC+AGG | 0.542533 | 7.2:+11442854 | MS.gene20035:CDS |
AGCTGCTAAGACTGAAGTAC+GGG | 0.545727 | 7.2:-11441308 | None:intergenic |
AAAGTGATTCGGAACCATAT+CGG | 0.550726 | 7.2:-11437153 | None:intergenic |
CAGCTGCTAAGACTGAAGTA+CGG | 0.551603 | 7.2:-11441309 | None:intergenic |
GCAGCTGCAAACCCTGTTGG+TGG | 0.552385 | 7.2:+11441325 | MS.gene20035:CDS |
ACAGGCTTTACTGGAGGCAA+TGG | 0.560762 | 7.2:+11441234 | MS.gene20035:intron |
GCAAATACATTGCTTATGCA+AGG | 0.561719 | 7.2:+11442836 | MS.gene20035:CDS |
GGCTAGCCGAAGCTCGAGCT+CGG | 0.562239 | 7.2:+11443089 | MS.gene20035:CDS |
AGTTCACATTCCACTGTTCG+AGG | 0.562723 | 7.2:-11438490 | None:intergenic |
GTAACCGTCACCACATCTCC+AGG | 0.563167 | 7.2:-11438541 | None:intergenic |
TCTTCACTGTTGAACAAACC+TGG | 0.565363 | 7.2:+11437221 | MS.gene20035:CDS |
TCAACAGTGAAGAGTTGTTG+AGG | 0.566173 | 7.2:-11437211 | None:intergenic |
TCAGAATAAGGTTCCTGTGA+GGG | 0.567443 | 7.2:+11440146 | MS.gene20035:CDS |
AGCTCATGTCCATAGATGGA+AGG | 0.568333 | 7.2:-11439571 | None:intergenic |
ACTCACGGAGCCAGTCGTCT+AGG | 0.568472 | 7.2:+11444455 | MS.gene20035:CDS |
CATTATTTGGCGGCGTACGG+AGG | 0.568523 | 7.2:+11440112 | MS.gene20035:CDS |
ATTCAAATTGCAAGTTGATG+GGG | 0.568890 | 7.2:-11438246 | None:intergenic |
AATTTAAAAGCAGCTTACAT+TGG | 0.570272 | 7.2:+11437969 | MS.gene20035:CDS |
AGCCCCTTGACCTAGACGAC+TGG | 0.570287 | 7.2:-11444465 | None:intergenic |
ATAACTCTATCATTATTTGG+CGG | 0.578321 | 7.2:+11440102 | MS.gene20035:CDS |
AGGAAAAGAGAGAAGAAGTG+AGG | 0.579043 | 7.2:-11437249 | None:intergenic |
CAGAATAAGGTTCCTGTGAG+GGG | 0.579252 | 7.2:+11440147 | MS.gene20035:CDS |
TATTATCCTCTTCGTACTCA+CGG | 0.583721 | 7.2:+11444440 | MS.gene20035:CDS |
ACAGTGTGTTTCTATTGCAA+AGG | 0.584931 | 7.2:+11441261 | MS.gene20035:CDS |
TTCAAATTGCAAGTTGATGG+GGG | 0.585102 | 7.2:-11438245 | None:intergenic |
GCTATGGTGCTGGCTGACAG+TGG | 0.585494 | 7.2:+11441083 | MS.gene20035:CDS |
TTAGCAGCTGCAAACCCTGT+TGG | 0.589249 | 7.2:+11441322 | MS.gene20035:CDS |
ATCAATATATTTATCATACA+GGG | 0.591073 | 7.2:-11443912 | None:intergenic |
GTGTGTTTCTATTGCAAAGG+CGG | 0.592077 | 7.2:+11441264 | MS.gene20035:CDS |
GGACTTGAGAGTAGAAATAA+CGG | 0.594417 | 7.2:+11443114 | MS.gene20035:CDS |
TGGAAGGGCATATAGAGTGA+AGG | 0.595503 | 7.2:-11439555 | None:intergenic |
AACTATACAGGCTTTACTGG+AGG | 0.596813 | 7.2:+11441228 | MS.gene20035:intron |
TTCTACCACAAGAGGCCTGA+CGG | 0.602191 | 7.2:-11438156 | None:intergenic |
ACATGAATATCTCCCCTCAC+AGG | 0.603165 | 7.2:-11440159 | None:intergenic |
AATTACATGGATATTGGAGG+AGG | 0.603394 | 7.2:+11438586 | MS.gene20035:CDS |
GCTCATGTCCATAGATGGAA+GGG | 0.603395 | 7.2:-11439570 | None:intergenic |
CGAATACGGAATGCACGGAA+CGG | 0.604124 | 7.2:+11437105 | None:intergenic |
CTTCAAACATACCGTATGAA+CGG | 0.606375 | 7.2:-11437781 | None:intergenic |
GTTTGAGCAGTAGATCGCAA+TGG | 0.610784 | 7.2:-11438293 | None:intergenic |
ATTTGTTGTGAAATTTGCAG+AGG | 0.612399 | 7.2:+11439504 | MS.gene20035:CDS |
TAAATGGGAGAGTGACAAGC+CGG | 0.613315 | 7.2:+11437884 | MS.gene20035:CDS |
AACTGGCTCTTACCTAGACC+AGG | 0.613927 | 7.2:-11440374 | None:intergenic |
GCAGAAGCTCTTGAATCAGA+AGG | 0.616635 | 7.2:-11442697 | None:intergenic |
AAACATGAAGATCACGAGGA+AGG | 0.616650 | 7.2:+11438460 | MS.gene20035:CDS |
AGCCAGTCGTCTAGGTCAAG+GGG | 0.618083 | 7.2:+11444463 | MS.gene20035:CDS |
CCTCACAGTAGCTGTAGTGA+AGG | 0.619903 | 7.2:+11440466 | MS.gene20035:CDS |
CAGCACCGTCAGGCCTCTTG+TGG | 0.622158 | 7.2:+11438151 | MS.gene20035:CDS |
GACAAGCTTGTCTCAGTGCG+TGG | 0.626282 | 7.2:+11438113 | MS.gene20035:intron |
AATAACGGCTCAGGATGCAA+TGG | 0.635142 | 7.2:+11443129 | MS.gene20035:CDS |
TTCATGCATTCCTGGAGATG+TGG | 0.637385 | 7.2:+11438531 | MS.gene20035:CDS |
AATAAGGATGTCCAAGCCCG+CGG | 0.637718 | 7.2:+11442970 | MS.gene20035:intron |
CCACGTGGTATCTATGTCTG+TGG | 0.638262 | 7.2:+11440422 | MS.gene20035:CDS |
GGATGTCGTTGAAATCATGA+AGG | 0.640932 | 7.2:+11443886 | MS.gene20035:intron |
TATTTGCGAAGAAGTTGACC+AGG | 0.643129 | 7.2:-11442820 | None:intergenic |
GTTACACGTATATTTCCCGA+TGG | 0.644950 | 7.2:+11438212 | MS.gene20035:CDS |
AAGTCAAAGAACAGAAACCA+AGG | 0.649686 | 7.2:+11439340 | MS.gene20035:CDS |
ACTTATAATGACCACCAACA+GGG | 0.656491 | 7.2:-11441336 | None:intergenic |
CGGAAGAGATGACAGAGCAG+AGG | 0.656552 | 7.2:+11437128 | MS.gene20035:CDS |
GAAGCTCTTGAATCAGAAGG+TGG | 0.658101 | 7.2:-11442694 | None:intergenic |
TAAGCCGAATACGGAATGCA+CGG | 0.668235 | 7.2:+11437100 | None:intergenic |
ATGGTACTCCTATAACAGCA+AGG | 0.669181 | 7.2:+11443047 | MS.gene20035:CDS |
ATACGGAATGCACGGAACGG+CGG | 0.674454 | 7.2:+11437108 | None:intergenic |
AGAACAAACCTGATGCTCTG+AGG | 0.677307 | 7.2:-11441138 | None:intergenic |
TAAATATATTGATGAGCATG+GGG | 0.677887 | 7.2:+11443922 | MS.gene20035:CDS |
CTGGCTCCGTGAGTACGAAG+AGG | 0.680237 | 7.2:-11444446 | None:intergenic |
AAAAGGACCAAAGACATACC+AGG | 0.683042 | 7.2:+11444233 | MS.gene20035:CDS |
ATCAGAATAAGGTTCCTGTG+AGG | 0.686718 | 7.2:+11440145 | MS.gene20035:CDS |
CATTCCTGGAGATGTGGTGA+CGG | 0.688405 | 7.2:+11438537 | MS.gene20035:CDS |
GCAGCAGCTGTTTCTCCACG+TGG | 0.713879 | 7.2:+11440407 | MS.gene20035:CDS |
CCACAGACATAGATACCACG+TGG | 0.717137 | 7.2:-11440422 | None:intergenic |
ATTAAAACATGAAGATCACG+AGG | 0.723521 | 7.2:+11438456 | MS.gene20035:CDS |
CCTTCACTACAGCTACTGTG+AGG | 0.742828 | 7.2:-11440466 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 11437115 | 11444489 | 11437115 | ID=MS.gene20035 |
chr7.2 | mRNA | 11437115 | 11444489 | 11437115 | ID=MS.gene20035.t1;Parent=MS.gene20035 |
chr7.2 | exon | 11437115 | 11437309 | 11437115 | ID=MS.gene20035.t1.exon1;Parent=MS.gene20035.t1 |
chr7.2 | CDS | 11437115 | 11437309 | 11437115 | ID=cds.MS.gene20035.t1;Parent=MS.gene20035.t1 |
chr7.2 | exon | 11437651 | 11437791 | 11437651 | ID=MS.gene20035.t1.exon2;Parent=MS.gene20035.t1 |
chr7.2 | CDS | 11437651 | 11437791 | 11437651 | ID=cds.MS.gene20035.t1;Parent=MS.gene20035.t1 |
chr7.2 | exon | 11437873 | 11437990 | 11437873 | ID=MS.gene20035.t1.exon3;Parent=MS.gene20035.t1 |
chr7.2 | CDS | 11437873 | 11437990 | 11437873 | ID=cds.MS.gene20035.t1;Parent=MS.gene20035.t1 |
chr7.2 | exon | 11438114 | 11438336 | 11438114 | ID=MS.gene20035.t1.exon4;Parent=MS.gene20035.t1 |
chr7.2 | CDS | 11438114 | 11438336 | 11438114 | ID=cds.MS.gene20035.t1;Parent=MS.gene20035.t1 |
chr7.2 | exon | 11438444 | 11438607 | 11438444 | ID=MS.gene20035.t1.exon5;Parent=MS.gene20035.t1 |
chr7.2 | CDS | 11438444 | 11438607 | 11438444 | ID=cds.MS.gene20035.t1;Parent=MS.gene20035.t1 |
chr7.2 | exon | 11439338 | 11439601 | 11439338 | ID=MS.gene20035.t1.exon6;Parent=MS.gene20035.t1 |
chr7.2 | CDS | 11439338 | 11439601 | 11439338 | ID=cds.MS.gene20035.t1;Parent=MS.gene20035.t1 |
chr7.2 | exon | 11440097 | 11440192 | 11440097 | ID=MS.gene20035.t1.exon7;Parent=MS.gene20035.t1 |
chr7.2 | CDS | 11440097 | 11440192 | 11440097 | ID=cds.MS.gene20035.t1;Parent=MS.gene20035.t1 |
chr7.2 | exon | 11440369 | 11440521 | 11440369 | ID=MS.gene20035.t1.exon8;Parent=MS.gene20035.t1 |
chr7.2 | CDS | 11440369 | 11440521 | 11440369 | ID=cds.MS.gene20035.t1;Parent=MS.gene20035.t1 |
chr7.2 | exon | 11441081 | 11441151 | 11441081 | ID=MS.gene20035.t1.exon9;Parent=MS.gene20035.t1 |
chr7.2 | CDS | 11441081 | 11441151 | 11441081 | ID=cds.MS.gene20035.t1;Parent=MS.gene20035.t1 |
chr7.2 | exon | 11441238 | 11441356 | 11441238 | ID=MS.gene20035.t1.exon10;Parent=MS.gene20035.t1 |
chr7.2 | CDS | 11441238 | 11441356 | 11441238 | ID=cds.MS.gene20035.t1;Parent=MS.gene20035.t1 |
chr7.2 | exon | 11441715 | 11441844 | 11441715 | ID=MS.gene20035.t1.exon11;Parent=MS.gene20035.t1 |
chr7.2 | CDS | 11441715 | 11441844 | 11441715 | ID=cds.MS.gene20035.t1;Parent=MS.gene20035.t1 |
chr7.2 | exon | 11442536 | 11442587 | 11442536 | ID=MS.gene20035.t1.exon12;Parent=MS.gene20035.t1 |
chr7.2 | CDS | 11442536 | 11442587 | 11442536 | ID=cds.MS.gene20035.t1;Parent=MS.gene20035.t1 |
chr7.2 | exon | 11442692 | 11442875 | 11442692 | ID=MS.gene20035.t1.exon13;Parent=MS.gene20035.t1 |
chr7.2 | CDS | 11442692 | 11442875 | 11442692 | ID=cds.MS.gene20035.t1;Parent=MS.gene20035.t1 |
chr7.2 | exon | 11442976 | 11443150 | 11442976 | ID=MS.gene20035.t1.exon14;Parent=MS.gene20035.t1 |
chr7.2 | CDS | 11442976 | 11443150 | 11442976 | ID=cds.MS.gene20035.t1;Parent=MS.gene20035.t1 |
chr7.2 | exon | 11443887 | 11444057 | 11443887 | ID=MS.gene20035.t1.exon15;Parent=MS.gene20035.t1 |
chr7.2 | CDS | 11443887 | 11444057 | 11443887 | ID=cds.MS.gene20035.t1;Parent=MS.gene20035.t1 |
chr7.2 | exon | 11444141 | 11444254 | 11444141 | ID=MS.gene20035.t1.exon16;Parent=MS.gene20035.t1 |
chr7.2 | CDS | 11444141 | 11444254 | 11444141 | ID=cds.MS.gene20035.t1;Parent=MS.gene20035.t1 |
chr7.2 | exon | 11444439 | 11444489 | 11444439 | ID=MS.gene20035.t1.exon17;Parent=MS.gene20035.t1 |
chr7.2 | CDS | 11444439 | 11444489 | 11444439 | ID=cds.MS.gene20035.t1;Parent=MS.gene20035.t1 |
Gene Sequence |
Protein sequence |