Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20049.t1 | AES81817.2 | 75.3 | 465 | 75 | 6 | 6 | 453 | 4 | 445 | 7.30E-189 | 670.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20049.t1 | O60841 | 33.0 | 569 | 235 | 14 | 17 | 455 | 630 | 1182 | 2.5e-68 | 261.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20049.t1 | G7L1S6 | 75.3 | 465 | 75 | 6 | 6 | 453 | 4 | 445 | 5.3e-189 | 670.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05265 | MS.gene20049 | 0.839367 | 1.65E-57 | -1.69E-46 |
| MS.gene05266 | MS.gene20049 | 0.811575 | 6.54E-51 | -1.69E-46 |
| MS.gene053154 | MS.gene20049 | 0.804619 | 1.98E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20049.t1 | MTR_7g100900 | 75.322 | 466 | 73 | 6 | 6 | 453 | 4 | 445 | 0.0 | 676 |
| MS.gene20049.t1 | MTR_4g011840 | 73.233 | 467 | 87 | 11 | 6 | 455 | 4 | 449 | 0.0 | 644 |
| MS.gene20049.t1 | MTR_1g099000 | 63.100 | 271 | 71 | 3 | 231 | 472 | 1066 | 1336 | 4.93e-99 | 325 |
| MS.gene20049.t1 | MTR_1g099000 | 50.820 | 244 | 75 | 8 | 10 | 221 | 742 | 972 | 2.82e-61 | 218 |
| MS.gene20049.t1 | MTR_1g098970 | 65.823 | 237 | 69 | 2 | 231 | 455 | 552 | 788 | 3.05e-94 | 304 |
| MS.gene20049.t1 | MTR_1g098970 | 50.000 | 244 | 77 | 8 | 10 | 221 | 228 | 458 | 1.13e-59 | 211 |
| MS.gene20049.t1 | MTR_4g006320 | 53.881 | 219 | 81 | 6 | 10 | 220 | 56 | 262 | 1.20e-63 | 213 |
| MS.gene20049.t1 | MTR_7g102950 | 36.207 | 290 | 132 | 9 | 17 | 270 | 36 | 308 | 1.08e-40 | 151 |
| MS.gene20049.t1 | MTR_7g102950 | 36.207 | 290 | 132 | 9 | 17 | 270 | 36 | 308 | 2.41e-40 | 149 |
| MS.gene20049.t1 | MTR_7g101830 | 40.969 | 227 | 102 | 9 | 17 | 221 | 55 | 271 | 1.66e-37 | 142 |
| MS.gene20049.t1 | MTR_4g005290 | 45.263 | 190 | 60 | 7 | 10 | 193 | 32 | 183 | 6.01e-34 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20049.t1 | AT1G76810 | 56.089 | 271 | 89 | 4 | 231 | 472 | 1021 | 1290 | 7.27e-80 | 271 |
| MS.gene20049.t1 | AT1G76810 | 46.581 | 234 | 80 | 8 | 17 | 218 | 704 | 924 | 8.60e-52 | 190 |
| MS.gene20049.t1 | AT1G21160 | 51.029 | 243 | 100 | 6 | 231 | 455 | 813 | 1054 | 2.40e-62 | 220 |
| MS.gene20049.t1 | AT1G21160 | 40.816 | 245 | 102 | 7 | 5 | 218 | 484 | 716 | 4.14e-45 | 170 |
| MS.gene20049.t1 | AT1G76720 | 52.521 | 238 | 89 | 5 | 231 | 455 | 944 | 1170 | 5.89e-60 | 214 |
| MS.gene20049.t1 | AT1G76720 | 43.802 | 242 | 91 | 8 | 9 | 218 | 619 | 847 | 3.95e-50 | 185 |
| MS.gene20049.t1 | AT1G76720 | 52.521 | 238 | 89 | 5 | 231 | 455 | 977 | 1203 | 9.15e-60 | 213 |
| MS.gene20049.t1 | AT1G76720 | 43.802 | 242 | 91 | 8 | 9 | 218 | 652 | 880 | 4.85e-50 | 185 |
| MS.gene20049.t1 | AT2G27700 | 40.586 | 239 | 100 | 7 | 17 | 225 | 35 | 261 | 5.92e-39 | 148 |
| MS.gene20049.t1 | AT2G27700 | 49.606 | 127 | 55 | 1 | 231 | 348 | 353 | 479 | 2.39e-29 | 120 |
| MS.gene20049.t1 | AT2G27700 | 40.336 | 238 | 100 | 7 | 17 | 224 | 35 | 260 | 8.42e-39 | 147 |
| MS.gene20049.t1 | AT2G27700 | 49.606 | 127 | 55 | 1 | 231 | 348 | 352 | 478 | 2.32e-29 | 121 |
Find 118 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCTTTATCAACCGGTTTA+AGG | 0.103803 | 7.2:-11302410 | None:intergenic |
| TCTATGTGATATTGCTATTT+TGG | 0.172010 | 7.2:+11300914 | MS.gene20049:CDS |
| AACAATAGAAATAACATATC+TGG | 0.212837 | 7.2:-11301281 | None:intergenic |
| TTATTGTTGAAGACAAAATT+TGG | 0.225479 | 7.2:-11301925 | None:intergenic |
| TTGGCAACTTGCACACAAAT+TGG | 0.226218 | 7.2:+11301777 | MS.gene20049:CDS |
| TGTTGATAACGCACCAATTA+GGG | 0.236097 | 7.2:+11300884 | MS.gene20049:CDS |
| CAATAAGGATCCCATTGTTT+TGG | 0.249255 | 7.2:+11301942 | MS.gene20049:CDS |
| TTGTTGATAACGCACCAATT+AGG | 0.258555 | 7.2:+11300883 | MS.gene20049:CDS |
| TTTAATAGATTGAGTGAGTC+TGG | 0.266163 | 7.2:-11300975 | None:intergenic |
| TTTCATTGTTGCCTTGAATA+AGG | 0.305733 | 7.2:+11301013 | MS.gene20049:CDS |
| CATAGATATGAACCCCTAAT+TGG | 0.307692 | 7.2:-11300897 | None:intergenic |
| AGCATTGATGCAGCAGTCTA+AGG | 0.316795 | 7.2:+11301085 | MS.gene20049:CDS |
| TCACAAAAGAACATTGATAT+TGG | 0.325612 | 7.2:+11302363 | MS.gene20049:CDS |
| GAGGAACGGCAGAAAATGTT+TGG | 0.326899 | 7.2:+11302813 | MS.gene20049:CDS |
| AGGGCAGCAAGTAGTCATTA+AGG | 0.347605 | 7.2:+11302437 | MS.gene20049:CDS |
| AACAACAAAACTATTGGAAT+TGG | 0.349319 | 7.2:+11301194 | MS.gene20049:CDS |
| CCTTTCTCCGCTTTATCAAC+CGG | 0.361422 | 7.2:-11302417 | None:intergenic |
| TGTTATTTCTATTGTTTAAG+TGG | 0.372478 | 7.2:+11301288 | MS.gene20049:CDS |
| ATGGAAGTTGGTGAAGAAAT+TGG | 0.380089 | 7.2:+11303009 | MS.gene20049:CDS |
| AAACCTGTTTCCTGCATCAT+AGG | 0.383280 | 7.2:+11300741 | MS.gene20049:CDS |
| TGCATGTAACTTTCACTCAT+TGG | 0.386009 | 7.2:+11301588 | MS.gene20049:CDS |
| AGCCGCCGCCGCCTAGTTAT+CGG | 0.390410 | 7.2:+11300718 | MS.gene20049:CDS |
| CGGTTTAAGGTTATTCTCAA+TGG | 0.393167 | 7.2:-11302397 | None:intergenic |
| GGTCAAGCCTAATGATGATT+TGG | 0.405047 | 7.2:+11301510 | MS.gene20049:CDS |
| ATACCTTCAAAATGCCTTGA+AGG | 0.406082 | 7.2:-11301975 | None:intergenic |
| CCTATGTTTACAGCACTAAC+AGG | 0.412018 | 7.2:-11301652 | None:intergenic |
| TGGGTGTATGCAAAATCAAT+TGG | 0.420450 | 7.2:+11299894 | None:intergenic |
| GTAGGTAAAATTGTGAATAA+TGG | 0.421445 | 7.2:-11301321 | None:intergenic |
| GGCAACAATGAAATGTTTGT+TGG | 0.425660 | 7.2:-11301003 | None:intergenic |
| CAACTTGGTTTGCAGATTGT+TGG | 0.426486 | 7.2:+11302780 | MS.gene20049:intron |
| TTCACCACTTATTGCACTTG+TGG | 0.428594 | 7.2:-11301252 | None:intergenic |
| GCTTTACGAAATGGAGCATT+GGG | 0.433943 | 7.2:-11301065 | None:intergenic |
| TCACCACTTATTGCACTTGT+GGG | 0.436527 | 7.2:-11301251 | None:intergenic |
| AAAACTATTGGAATTGGAGT+TGG | 0.440021 | 7.2:+11301200 | MS.gene20049:CDS |
| TTTCCCCTGTCGAACATCAT+TGG | 0.441440 | 7.2:-11303088 | None:intergenic |
| TTGGAATCCAAATCATCATT+AGG | 0.446871 | 7.2:-11301517 | None:intergenic |
| ATGCTTCTCGGTTGTATTCG+AGG | 0.448156 | 7.2:+11300786 | MS.gene20049:CDS |
| TCACCTATGATGCAGGAAAC+AGG | 0.449664 | 7.2:-11300744 | None:intergenic |
| TGCATCAATGCTTTACGAAA+TGG | 0.450689 | 7.2:-11301074 | None:intergenic |
| TCCACATCCTTCTTATGTAC+AGG | 0.452205 | 7.2:-11301676 | None:intergenic |
| AATTGTGAATAATGGTGTAT+TGG | 0.455721 | 7.2:-11301313 | None:intergenic |
| TGGCAACTTGCACACAAATT+GGG | 0.455869 | 7.2:+11301778 | MS.gene20049:CDS |
| CATTGAGAATAACCTTAAAC+CGG | 0.464349 | 7.2:+11302398 | MS.gene20049:CDS |
| GTGATATGATTGTGGATGAA+TGG | 0.465953 | 7.2:+11302990 | MS.gene20049:CDS |
| ACTGGCAAAACCATGCTTCT+CGG | 0.473552 | 7.2:+11300774 | MS.gene20049:CDS |
| GCTTCAGAGGTGACCATGAC+AGG | 0.474789 | 7.2:-11301754 | None:intergenic |
| GGAAAATGTGTTGTTGATGA+TGG | 0.476973 | 7.2:-11300831 | None:intergenic |
| GACTTACATGAAAAGACTTA+AGG | 0.477581 | 7.2:+11301852 | MS.gene20049:CDS |
| TTCCGATAACTAGGCGGCGG+CGG | 0.480520 | 7.2:-11300720 | None:intergenic |
| TGCTTTACGAAATGGAGCAT+TGG | 0.484108 | 7.2:-11301066 | None:intergenic |
| CATAGGTCCTGTACATAAGA+AGG | 0.490399 | 7.2:+11301669 | MS.gene20049:CDS |
| ACTATTGGAATTGGAGTTGG+AGG | 0.492297 | 7.2:+11301203 | MS.gene20049:CDS |
| TGTGTTTGCGTTTCCTGTCA+TGG | 0.492509 | 7.2:+11301741 | MS.gene20049:CDS |
| ACATCTACTCCCAAAACAAT+GGG | 0.494191 | 7.2:-11301952 | None:intergenic |
| CAGGGGAAAGCAAATATTCA+AGG | 0.494199 | 7.2:+11303102 | MS.gene20049:CDS |
| CCGGTTGATAAAGCGGAGAA+AGG | 0.494425 | 7.2:+11302417 | MS.gene20049:CDS |
| AATCATGTCGACCTTATTCA+AGG | 0.495710 | 7.2:-11301024 | None:intergenic |
| TTGGGAGTAGATGTCCTTCA+AGG | 0.497575 | 7.2:+11301961 | MS.gene20049:CDS |
| AGGAACGGCAGAAAATGTTT+GGG | 0.497795 | 7.2:+11302814 | MS.gene20049:CDS |
| ATTCACCAATGATGTTCGAC+AGG | 0.502125 | 7.2:+11303083 | MS.gene20049:CDS |
| ACAATAGAAATAACATATCT+GGG | 0.502360 | 7.2:-11301280 | None:intergenic |
| TGGCATGATCTTGAGAATGC+AGG | 0.505991 | 7.2:-11301905 | None:intergenic |
| ATTCCAAGTCAATCTTGAGC+AGG | 0.514170 | 7.2:+11301533 | MS.gene20049:CDS |
| GCATTGATGCAGCAGTCTAA+GGG | 0.516752 | 7.2:+11301086 | MS.gene20049:CDS |
| GAAACAGGTTTCCGATAACT+AGG | 0.520468 | 7.2:-11300729 | None:intergenic |
| TGATGCTGAAAGACGTCTGC+TGG | 0.528325 | 7.2:+11300860 | MS.gene20049:CDS |
| TTAATAGATTGAGTGAGTCT+GGG | 0.528397 | 7.2:-11300974 | None:intergenic |
| TCATGGTCACCTCTGAAGCT+TGG | 0.529642 | 7.2:+11301758 | MS.gene20049:CDS |
| ATTGGAATTGGAGTTGGAGG+AGG | 0.530031 | 7.2:+11301206 | MS.gene20049:CDS |
| CTACAGTCAACAAGCTGTGC+AGG | 0.530196 | 7.2:+11301340 | MS.gene20049:CDS |
| CCTGTTAGTGCTGTAAACAT+AGG | 0.535265 | 7.2:+11301652 | MS.gene20049:CDS |
| CGGTTGATAAAGCGGAGAAA+GGG | 0.545541 | 7.2:+11302418 | MS.gene20049:CDS |
| GACATCTACTCCCAAAACAA+TGG | 0.548436 | 7.2:-11301953 | None:intergenic |
| CGTCTTTCAGCATCACCAGC+AGG | 0.548747 | 7.2:-11300852 | None:intergenic |
| TCCTGTACATAAGAAGGATG+TGG | 0.551184 | 7.2:+11301675 | MS.gene20049:CDS |
| GTACGCATCACCTATGATGC+AGG | 0.551576 | 7.2:-11300751 | None:intergenic |
| AATCCTGCTCAAGATTGACT+TGG | 0.559695 | 7.2:-11301536 | None:intergenic |
| AAAGAAAGATTCTGCTGATG+AGG | 0.561211 | 7.2:+11301882 | MS.gene20049:CDS |
| GGGTGTATGCAAAATCAATT+GGG | 0.562648 | 7.2:+11299895 | None:intergenic |
| AGGTCGACATGATTCATGAC+TGG | 0.563144 | 7.2:+11301033 | MS.gene20049:CDS |
| CCTTAAACCGGTTGATAAAG+CGG | 0.563826 | 7.2:+11302410 | MS.gene20049:CDS |
| ATTATGCATGATCATGATGA+TGG | 0.566083 | 7.2:+11300945 | MS.gene20049:CDS |
| GATTGTTGGCAGCAATTCTG+AGG | 0.566245 | 7.2:+11302794 | MS.gene20049:intron |
| GATTGTGGATGAATGGAAGT+TGG | 0.568505 | 7.2:+11302997 | MS.gene20049:CDS |
| GTTTCTCAGTTCAAGACACA+CGG | 0.570872 | 7.2:+11301146 | MS.gene20049:CDS |
| TTTAAGGTTATTCTCAATGG+AGG | 0.578938 | 7.2:-11302394 | None:intergenic |
| ACAAGTGCAATAAGTGGTGA+AGG | 0.579962 | 7.2:+11301254 | MS.gene20049:CDS |
| TTCAAGATGACTTTCATACC+AGG | 0.585670 | 7.2:+11301111 | MS.gene20049:CDS |
| ACATAAGAAGGATGTGGAGA+AGG | 0.587750 | 7.2:+11301681 | MS.gene20049:CDS |
| TTGGCAGCAATTCTGAGGAA+CGG | 0.593050 | 7.2:+11302799 | MS.gene20049:CDS |
| AGGATTGACACGACTCCTGA+GGG | 0.593387 | 7.2:+11301553 | MS.gene20049:CDS |
| TCATTAGGCTTGACCACAGG+TGG | 0.596499 | 7.2:-11301502 | None:intergenic |
| GAGATTTATTCGTCCACCTG+TGG | 0.603555 | 7.2:+11301489 | MS.gene20049:intron |
| TGCAAGTTGCCAAGCTTCAG+AGG | 0.608001 | 7.2:-11301767 | None:intergenic |
| GCAAACACAACAGCATACTC+TGG | 0.609863 | 7.2:-11301727 | None:intergenic |
| ATCATAGGTGATGCGTACAC+TGG | 0.610292 | 7.2:+11300756 | MS.gene20049:CDS |
| GATCTAGGGTGATATGATTG+TGG | 0.619609 | 7.2:+11302982 | MS.gene20049:intron |
| AGAAACAAGCTTAGAGACCC+TGG | 0.621910 | 7.2:-11301129 | None:intergenic |
| TCATCATTAGGCTTGACCAC+AGG | 0.622043 | 7.2:-11301505 | None:intergenic |
| AGGGGAAAGCAAATATTCAA+GGG | 0.622775 | 7.2:+11303103 | MS.gene20049:CDS |
| CAGGATTGACACGACTCCTG+AGG | 0.624798 | 7.2:+11301552 | MS.gene20049:CDS |
| GGTTTCCGATAACTAGGCGG+CGG | 0.628612 | 7.2:-11300723 | None:intergenic |
| TTACATGAAAAGACTTAAGG+AGG | 0.633295 | 7.2:+11301855 | MS.gene20049:CDS |
| AACGGCAGAAAATGTTTGGG+AGG | 0.637423 | 7.2:+11302817 | MS.gene20049:CDS |
| GTGCCCACAAGTGCAATAAG+TGG | 0.639388 | 7.2:+11301248 | MS.gene20049:CDS |
| TCGAATACAACCGAGAAGCA+TGG | 0.646439 | 7.2:-11300784 | None:intergenic |
| TTTCTCAGTTCAAGACACAC+GGG | 0.651312 | 7.2:+11301147 | MS.gene20049:CDS |
| GTTGATAACGCACCAATTAG+GGG | 0.652792 | 7.2:+11300885 | MS.gene20049:CDS |
| GATTGACACGACTCCTGAGG+GGG | 0.654054 | 7.2:+11301555 | MS.gene20049:CDS |
| CTGCACAGCTTGTTGACTGT+AGG | 0.660778 | 7.2:-11301339 | None:intergenic |
| CTAACAGGAATATTGACTTG+TGG | 0.661965 | 7.2:-11301637 | None:intergenic |
| TTCACCAATGATGTTCGACA+GGG | 0.664359 | 7.2:+11303084 | MS.gene20049:CDS |
| TCAAGATGACTTTCATACCA+GGG | 0.669658 | 7.2:+11301112 | MS.gene20049:CDS |
| TCACCAATGATGTTCGACAG+GGG | 0.718901 | 7.2:+11303085 | MS.gene20049:CDS |
| TATTCTCAATGGAGGCAATG+CGG | 0.721051 | 7.2:-11302386 | None:intergenic |
| GTTGTTGATGATGGAATATG+CGG | 0.722612 | 7.2:-11300822 | None:intergenic |
| GGATTGACACGACTCCTGAG+GGG | 0.733825 | 7.2:+11301554 | MS.gene20049:CDS |
| ACAGGTTTCCGATAACTAGG+CGG | 0.768874 | 7.2:-11300726 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGATTGATTATTATTATTA+TGG | + | chr7.2:11300646-11300665 | MS.gene20049:intron | 10.0% |
| !! | AATGTGTATTTAACTATTTA+TGG | + | chr7.2:11302916-11302935 | MS.gene20049:intron | 15.0% |
| !! | ATATATATATATATAGAGGA+GGG | - | chr7.2:11300189-11300208 | None:intergenic | 15.0% |
| !! | TATAAAAACAACAAAACTAT+TGG | + | chr7.2:11301188-11301207 | MS.gene20049:CDS | 15.0% |
| !! | TATATATATATATATAGAGG+AGG | - | chr7.2:11300190-11300209 | None:intergenic | 15.0% |
| !! | TATTTAACTATTTATGGATT+TGG | + | chr7.2:11302922-11302941 | MS.gene20049:intron | 15.0% |
| !! | TTAGATTAAAATAAGATGAA+AGG | + | chr7.2:11300116-11300135 | MS.gene20049:intron | 15.0% |
| !!! | AATTAGCAATTCTATATTTT+CGG | + | chr7.2:11302125-11302144 | MS.gene20049:intron | 15.0% |
| !!! | GTTTTATGAGAATTAATTAA+GGG | + | chr7.2:11300019-11300038 | MS.gene20049:intron | 15.0% |
| !!! | TGTTTTATGAGAATTAATTA+AGG | + | chr7.2:11300018-11300037 | MS.gene20049:intron | 15.0% |
| !!! | TTCATCTTATTTTAATCTAA+TGG | - | chr7.2:11300116-11300135 | None:intergenic | 15.0% |
| !! | AACAATAGAAATAACATATC+TGG | - | chr7.2:11301284-11301303 | None:intergenic | 20.0% |
| !! | ACAATAGAAATAACATATCT+GGG | - | chr7.2:11301283-11301302 | None:intergenic | 20.0% |
| !! | ATAATAATAAGTGGGAAAAA+AGG | - | chr7.2:11301371-11301390 | None:intergenic | 20.0% |
| !! | ATTAATTAAGGGAGAATAAT+TGG | + | chr7.2:11300030-11300049 | MS.gene20049:intron | 20.0% |
| !! | ATTGTTGAATTATTGATCTA+GGG | + | chr7.2:11302968-11302987 | MS.gene20049:intron | 20.0% |
| !! | TATTGTTGAATTATTGATCT+AGG | + | chr7.2:11302967-11302986 | MS.gene20049:intron | 20.0% |
| !! | TTATTGTTGAAGACAAAATT+TGG | - | chr7.2:11301928-11301947 | None:intergenic | 20.0% |
| !! | TTTATTATTAATGACTTACC+CGG | - | chr7.2:11302880-11302899 | None:intergenic | 20.0% |
| !!! | AAATAGATGATGCATTTTAA+CGG | - | chr7.2:11301821-11301840 | None:intergenic | 20.0% |
| !!! | AAATTTTGTCTTCAACAATA+AGG | + | chr7.2:11301927-11301946 | MS.gene20049:CDS | 20.0% |
| !!! | ACAATATAACTTTTAAGAGA+CGG | - | chr7.2:11302953-11302972 | None:intergenic | 20.0% |
| !!! | ACTAGTTTATGATAAAACAA+CGG | - | chr7.2:11302628-11302647 | None:intergenic | 20.0% |
| !!! | ATTAGCAATTCTATATTTTC+GGG | + | chr7.2:11302126-11302145 | MS.gene20049:intron | 20.0% |
| !!! | TGTTATTTCTATTGTTTAAG+TGG | + | chr7.2:11301288-11301307 | MS.gene20049:CDS | 20.0% |
| ! | AACAACAAAACTATTGGAAT+TGG | + | chr7.2:11301194-11301213 | MS.gene20049:CDS | 25.0% |
| ! | AATTGTGAATAATGGTGTAT+TGG | - | chr7.2:11301316-11301335 | None:intergenic | 25.0% |
| ! | ACAAAATTATTCCCCAATAA+AGG | + | chr7.2:11302502-11302521 | MS.gene20049:intron | 25.0% |
| ! | ATATCTCAAATTCCCTTTAT+TGG | - | chr7.2:11302518-11302537 | None:intergenic | 25.0% |
| ! | CAAAATTATTCCCCAATAAA+GGG | + | chr7.2:11302503-11302522 | MS.gene20049:intron | 25.0% |
| ! | GATTAAAATAAGATGAAAGG+TGG | + | chr7.2:11300119-11300138 | MS.gene20049:intron | 25.0% |
| ! | GTAGGTAAAATTGTGAATAA+TGG | - | chr7.2:11301324-11301343 | None:intergenic | 25.0% |
| ! | TAAGTCTATAAACTTACTCT+TGG | + | chr7.2:11300152-11300171 | MS.gene20049:intron | 25.0% |
| ! | TATCTCAAATTCCCTTTATT+GGG | - | chr7.2:11302517-11302536 | None:intergenic | 25.0% |
| ! | TCACAAAAGAACATTGATAT+TGG | + | chr7.2:11302363-11302382 | MS.gene20049:CDS | 25.0% |
| ! | TTTAGTTGAAATAAGCTTGT+CGG | + | chr7.2:11300382-11300401 | MS.gene20049:intron | 25.0% |
| !! | AACTATTTATGGATTTGGTT+TGG | + | chr7.2:11302927-11302946 | MS.gene20049:intron | 25.0% |
| !! | AATAAAGGGAATTTGAGATA+TGG | + | chr7.2:11302517-11302536 | MS.gene20049:intron | 25.0% |
| !! | ATATCAATGTTCTTTTGTGA+AGG | - | chr7.2:11302363-11302382 | None:intergenic | 25.0% |
| !! | TTGGTGATAATTGAATGTTA+TGG | - | chr7.2:11300539-11300558 | None:intergenic | 25.0% |
| !! | TTTTGTGAAGGAATACAAAT+TGG | - | chr7.2:11302351-11302370 | None:intergenic | 25.0% |
| !!! | TCTATGTGATATTGCTATTT+TGG | + | chr7.2:11300914-11300933 | MS.gene20049:CDS | 25.0% |
| !!! | TTTTTCAACATCACAATCAT+AGG | - | chr7.2:11302562-11302581 | None:intergenic | 25.0% |
| AAAACTATTGGAATTGGAGT+TGG | + | chr7.2:11301200-11301219 | MS.gene20049:CDS | 30.0% | |
| AAAATCAATTGGGTGAGTTA+GGG | + | chr7.2:11299905-11299924 | MS.gene20049:intron | 30.0% | |
| AAGAAGAAGATGAATGAAGA+AGG | + | chr7.2:11300600-11300619 | MS.gene20049:intron | 30.0% | |
| AATTATCACCAAACACAAGA+AGG | + | chr7.2:11300547-11300566 | MS.gene20049:intron | 30.0% | |
| ACACAAAGCATAAAACAGAA+TGG | - | chr7.2:11302194-11302213 | None:intergenic | 30.0% | |
| AGTACAATGCCACAATAAAA+GGG | + | chr7.2:11300311-11300330 | MS.gene20049:intron | 30.0% | |
| ATCTCAAATTCCCTTTATTG+GGG | - | chr7.2:11302516-11302535 | None:intergenic | 30.0% | |
| ATTATCACCAAACACAAGAA+GGG | + | chr7.2:11300548-11300567 | MS.gene20049:intron | 30.0% | |
| ATTATGCATGATCATGATGA+TGG | + | chr7.2:11300945-11300964 | MS.gene20049:CDS | 30.0% | |
| CATTGAGAATAACCTTAAAC+CGG | + | chr7.2:11302398-11302417 | MS.gene20049:CDS | 30.0% | |
| CGGCTACAAATAACTTAAAA+CGG | - | chr7.2:11302608-11302627 | None:intergenic | 30.0% | |
| GACTTACATGAAAAGACTTA+AGG | + | chr7.2:11301852-11301871 | MS.gene20049:CDS | 30.0% | |
| TCTTAATGTTCTGTTCAACT+TGG | + | chr7.2:11302765-11302784 | MS.gene20049:intron | 30.0% | |
| TTAATAGATTGAGTGAGTCT+GGG | - | chr7.2:11300977-11300996 | None:intergenic | 30.0% | |
| TTACATGAAAAGACTTAAGG+AGG | + | chr7.2:11301855-11301874 | MS.gene20049:CDS | 30.0% | |
| TTAGTTGAAATAAGCTTGTC+GGG | + | chr7.2:11300383-11300402 | MS.gene20049:intron | 30.0% | |
| TTGGAATCCAAATCATCATT+AGG | - | chr7.2:11301520-11301539 | None:intergenic | 30.0% | |
| TTTAATAGATTGAGTGAGTC+TGG | - | chr7.2:11300978-11300997 | None:intergenic | 30.0% | |
| TTTCATTGTTGCCTTGAATA+AGG | + | chr7.2:11301013-11301032 | MS.gene20049:CDS | 30.0% | |
| ! | AATAAGGATCCCATTGTTTT+GGG | + | chr7.2:11301943-11301962 | MS.gene20049:CDS | 30.0% |
| ! | CATAACATCTTTTCTCATTG+TGG | + | chr7.2:11302009-11302028 | MS.gene20049:intron | 30.0% |
| ! | TGCAATGCACAAAATTTGTT+TGG | + | chr7.2:11302279-11302298 | MS.gene20049:intron | 30.0% |
| ! | TGTTTTCTCTGCATTAGATT+GGG | + | chr7.2:11302054-11302073 | MS.gene20049:intron | 30.0% |
| ! | TTGTTTTCTCTGCATTAGAT+TGG | + | chr7.2:11302053-11302072 | MS.gene20049:intron | 30.0% |
| ! | TTTAAGGTTATTCTCAATGG+AGG | - | chr7.2:11302397-11302416 | None:intergenic | 30.0% |
| !! | GAGGGTATTCTTGTAATTAA+GGG | + | chr7.2:11300352-11300371 | MS.gene20049:intron | 30.0% |
| AAAGAAAGATTCTGCTGATG+AGG | + | chr7.2:11301882-11301901 | MS.gene20049:CDS | 35.0% | |
| AACTTGTAAGCCATAATACC+GGG | + | chr7.2:11302859-11302878 | MS.gene20049:intron | 35.0% | |
| AATCATGTCGACCTTATTCA+AGG | - | chr7.2:11301027-11301046 | None:intergenic | 35.0% | |
| ACATCTACTCCCAAAACAAT+GGG | - | chr7.2:11301955-11301974 | None:intergenic | 35.0% | |
| AGAGAAATAAAACTGTGCAG+AGG | + | chr7.2:11302730-11302749 | MS.gene20049:intron | 35.0% | |
| AGGGGAAAGCAAATATTCAA+GGG | + | chr7.2:11303103-11303122 | MS.gene20049:CDS | 35.0% | |
| ATACCTTCAAAATGCCTTGA+AGG | - | chr7.2:11301978-11301997 | None:intergenic | 35.0% | |
| ATATTGTCTGCTTGACAGAT+TGG | + | chr7.2:11302321-11302340 | MS.gene20049:intron | 35.0% | |
| ATATTTGATATCTAGCCACC+AGG | + | chr7.2:11300500-11300519 | MS.gene20049:intron | 35.0% | |
| CAAAATCAATTGGGTGAGTT+AGG | + | chr7.2:11299904-11299923 | MS.gene20049:intron | 35.0% | |
| CACGTGTAAATCAGTGAAAT+TGG | - | chr7.2:11302682-11302701 | None:intergenic | 35.0% | |
| CAGTACAATGCCACAATAAA+AGG | + | chr7.2:11300310-11300329 | MS.gene20049:intron | 35.0% | |
| CATAGATATGAACCCCTAAT+TGG | - | chr7.2:11300900-11300919 | None:intergenic | 35.0% | |
| CATCACAATCATAGGCATAA+AGG | - | chr7.2:11302554-11302573 | None:intergenic | 35.0% | |
| GAACTTGTAAGCCATAATAC+CGG | + | chr7.2:11302858-11302877 | MS.gene20049:intron | 35.0% | |
| GGCAACAATGAAATGTTTGT+TGG | - | chr7.2:11301006-11301025 | None:intergenic | 35.0% | |
| GTGATATGATTGTGGATGAA+TGG | + | chr7.2:11302990-11303009 | MS.gene20049:CDS | 35.0% | |
| TAAGATGAAAGGTGGAGATT+TGG | + | chr7.2:11300127-11300146 | MS.gene20049:intron | 35.0% | |
| TAAGGGAGAATAATTGGAGA+AGG | + | chr7.2:11300036-11300055 | MS.gene20049:intron | 35.0% | |
| TAATGACTTACCCGGTATTA+TGG | - | chr7.2:11302872-11302891 | None:intergenic | 35.0% | |
| TATTGTGGCATTGTACTGTT+CGG | - | chr7.2:11300308-11300327 | None:intergenic | 35.0% | |
| TCAAGATGACTTTCATACCA+GGG | + | chr7.2:11301112-11301131 | MS.gene20049:CDS | 35.0% | |
| TGCATCAATGCTTTACGAAA+TGG | - | chr7.2:11301077-11301096 | None:intergenic | 35.0% | |
| TGCATGTAACTTTCACTCAT+TGG | + | chr7.2:11301588-11301607 | MS.gene20049:CDS | 35.0% | |
| TGTGTTCTTATGTATCAGAC+TGG | + | chr7.2:11302209-11302228 | MS.gene20049:intron | 35.0% | |
| TTCAAGATGACTTTCATACC+AGG | + | chr7.2:11301111-11301130 | MS.gene20049:CDS | 35.0% | |
| TTTGTGAGTTCAGAGAAGTT+TGG | - | chr7.2:11302487-11302506 | None:intergenic | 35.0% | |
| ! | CAATAAGGATCCCATTGTTT+TGG | + | chr7.2:11301942-11301961 | MS.gene20049:CDS | 35.0% |
| ! | CGATTAGGGTTTCTTTTGAT+CGG | - | chr7.2:11300575-11300594 | None:intergenic | 35.0% |
| ! | CGGTTTAAGGTTATTCTCAA+TGG | - | chr7.2:11302400-11302419 | None:intergenic | 35.0% |
| ! | CTCAGTATTGAACAAGAGAA+GGG | - | chr7.2:11300473-11300492 | None:intergenic | 35.0% |
| ! | GGAAAATGTGTTGTTGATGA+TGG | - | chr7.2:11300834-11300853 | None:intergenic | 35.0% |
| ! | GTTTTCTCTGCATTAGATTG+GGG | + | chr7.2:11302055-11302074 | MS.gene20049:intron | 35.0% |
| ! | TGCTTTGAATGTTTCTTTCC+AGG | + | chr7.2:11300684-11300703 | MS.gene20049:intron | 35.0% |
| !! | AATTCTATATTTTCGGGCCT+TGG | + | chr7.2:11302132-11302151 | MS.gene20049:intron | 35.0% |
| !! | ATGGAAGTTGGTGAAGAAAT+TGG | + | chr7.2:11303009-11303028 | MS.gene20049:CDS | 35.0% |
| !! | ATTCTATATTTTCGGGCCTT+GGG | + | chr7.2:11302133-11302152 | MS.gene20049:intron | 35.0% |
| !! | CTAACAGGAATATTGACTTG+TGG | - | chr7.2:11301640-11301659 | None:intergenic | 35.0% |
| !! | GGAGGGTATTCTTGTAATTA+AGG | + | chr7.2:11300351-11300370 | MS.gene20049:intron | 35.0% |
| !! | GTTGTTGATGATGGAATATG+CGG | - | chr7.2:11300825-11300844 | None:intergenic | 35.0% |
| !! | TGTTGATAACGCACCAATTA+GGG | + | chr7.2:11300884-11300903 | MS.gene20049:CDS | 35.0% |
| !! | TTGTTGATAACGCACCAATT+AGG | + | chr7.2:11300883-11300902 | MS.gene20049:CDS | 35.0% |
| !!! | AAATGTTTGGGAGGCATTTT+TGG | + | chr7.2:11302826-11302845 | MS.gene20049:CDS | 35.0% |
| AAACAGAATGGACCTAGGTT+AGG | - | chr7.2:11302182-11302201 | None:intergenic | 40.0% | |
| AAACCTGTTTCCTGCATCAT+AGG | + | chr7.2:11300741-11300760 | MS.gene20049:CDS | 40.0% | |
| AATACCCTCCCATGTATTGT+GGG | - | chr7.2:11300341-11300360 | None:intergenic | 40.0% | |
| AATCCTGCTCAAGATTGACT+TGG | - | chr7.2:11301539-11301558 | None:intergenic | 40.0% | |
| ACAAGTGCAATAAGTGGTGA+AGG | + | chr7.2:11301254-11301273 | MS.gene20049:CDS | 40.0% | |
| ACAATGCCACAATAAAAGGG+AGG | + | chr7.2:11300314-11300333 | MS.gene20049:intron | 40.0% | |
| ACATAAGAAGGATGTGGAGA+AGG | + | chr7.2:11301681-11301700 | MS.gene20049:CDS | 40.0% | |
| ACCAAAACAGACATCCAAGA+CGG | - | chr7.2:11302236-11302255 | None:intergenic | 40.0% | |
| ACCTAGGTTAGGTTAACAGT+AGG | - | chr7.2:11302171-11302190 | None:intergenic | 40.0% | |
| ACGTGCTCGATATTTAGATG+TGG | + | chr7.2:11302697-11302716 | MS.gene20049:intron | 40.0% | |
| ACTATTGGAATTGGAGTTGG+AGG | + | chr7.2:11301203-11301222 | MS.gene20049:CDS | 40.0% | |
| AGGAACGGCAGAAAATGTTT+GGG | + | chr7.2:11302814-11302833 | MS.gene20049:CDS | 40.0% | |
| ATTCACCAATGATGTTCGAC+AGG | + | chr7.2:11303083-11303102 | MS.gene20049:CDS | 40.0% | |
| ATTCCAAGTCAATCTTGAGC+AGG | + | chr7.2:11301533-11301552 | MS.gene20049:CDS | 40.0% | |
| ATTGTGGCATTGTACTGTTC+GGG | - | chr7.2:11300307-11300326 | None:intergenic | 40.0% | |
| CAATGCCACAATAAAAGGGA+GGG | + | chr7.2:11300315-11300334 | MS.gene20049:intron | 40.0% | |
| CAGGGGAAAGCAAATATTCA+AGG | + | chr7.2:11303102-11303121 | MS.gene20049:CDS | 40.0% | |
| CATAGGTCCTGTACATAAGA+AGG | + | chr7.2:11301669-11301688 | MS.gene20049:CDS | 40.0% | |
| CCTATGTTTACAGCACTAAC+AGG | - | chr7.2:11301655-11301674 | None:intergenic | 40.0% | |
| CCTGTTAGTGCTGTAAACAT+AGG | + | chr7.2:11301652-11301671 | MS.gene20049:CDS | 40.0% | |
| CTTCTTCTTCGATGCGATTA+GGG | - | chr7.2:11300589-11300608 | None:intergenic | 40.0% | |
| GAAACAGGTTTCCGATAACT+AGG | - | chr7.2:11300732-11300751 | None:intergenic | 40.0% | |
| GAAGGTAGTTAGATCCACAA+AGG | + | chr7.2:11300054-11300073 | MS.gene20049:intron | 40.0% | |
| GACATCTACTCCCAAAACAA+TGG | - | chr7.2:11301956-11301975 | None:intergenic | 40.0% | |
| GATTGTGGATGAATGGAAGT+TGG | + | chr7.2:11302997-11303016 | MS.gene20049:CDS | 40.0% | |
| GCATAAAACAGAATGGACCT+AGG | - | chr7.2:11302187-11302206 | None:intergenic | 40.0% | |
| GGTCAAGCCTAATGATGATT+TGG | + | chr7.2:11301510-11301529 | MS.gene20049:CDS | 40.0% | |
| GTTTCTCAGTTCAAGACACA+CGG | + | chr7.2:11301146-11301165 | MS.gene20049:CDS | 40.0% | |
| TAAGCTTGTCGGGACTATTT+CGG | + | chr7.2:11300393-11300412 | MS.gene20049:intron | 40.0% | |
| TAATCATGTGACCACCTTTG+TGG | - | chr7.2:11300071-11300090 | None:intergenic | 40.0% | |
| TAGGTTAGGTTAACAGTAGG+AGG | - | chr7.2:11302168-11302187 | None:intergenic | 40.0% | |
| TATGGCATAGTGTTTGATCC+TGG | - | chr7.2:11300521-11300540 | None:intergenic | 40.0% | |
| TATTCTCAATGGAGGCAATG+CGG | - | chr7.2:11302389-11302408 | None:intergenic | 40.0% | |
| TATTTCGGGAACAAGCTTGT+CGG | + | chr7.2:11300408-11300427 | MS.gene20049:intron | 40.0% | |
| TCACCACTTATTGCACTTGT+GGG | - | chr7.2:11301254-11301273 | None:intergenic | 40.0% | |
| TCCACATCCTTCTTATGTAC+AGG | - | chr7.2:11301679-11301698 | None:intergenic | 40.0% | |
| TCCTACTGTTAACCTAACCT+AGG | + | chr7.2:11302167-11302186 | MS.gene20049:intron | 40.0% | |
| TCCTGTACATAAGAAGGATG+TGG | + | chr7.2:11301675-11301694 | MS.gene20049:CDS | 40.0% | |
| TCTTCTTCTTCGATGCGATT+AGG | - | chr7.2:11300590-11300609 | None:intergenic | 40.0% | |
| TGAGTTAGGGTACAAAGCAT+TGG | + | chr7.2:11299918-11299937 | MS.gene20049:intron | 40.0% | |
| TGCTTTACGAAATGGAGCAT+TGG | - | chr7.2:11301069-11301088 | None:intergenic | 40.0% | |
| TGGCAACTTGCACACAAATT+GGG | + | chr7.2:11301778-11301797 | MS.gene20049:CDS | 40.0% | |
| TTCACCAATGATGTTCGACA+GGG | + | chr7.2:11303084-11303103 | MS.gene20049:CDS | 40.0% | |
| TTCACCACTTATTGCACTTG+TGG | - | chr7.2:11301255-11301274 | None:intergenic | 40.0% | |
| TTGGCAACTTGCACACAAAT+TGG | + | chr7.2:11301777-11301796 | MS.gene20049:CDS | 40.0% | |
| TTTCTCAGTTCAAGACACAC+GGG | + | chr7.2:11301147-11301166 | MS.gene20049:CDS | 40.0% | |
| ! | AAAGAGTGCGTTTGTGAGAA+AGG | + | chr7.2:11299990-11300009 | MS.gene20049:intron | 40.0% |
| ! | GAGTTAGGGTACAAAGCATT+GGG | + | chr7.2:11299919-11299938 | MS.gene20049:intron | 40.0% |
| ! | GATCTAGGGTGATATGATTG+TGG | + | chr7.2:11302982-11303001 | MS.gene20049:intron | 40.0% |
| ! | GCTCAGTATTGAACAAGAGA+AGG | - | chr7.2:11300474-11300493 | None:intergenic | 40.0% |
| ! | GCTTTACGAAATGGAGCATT+GGG | - | chr7.2:11301068-11301087 | None:intergenic | 40.0% |
| ! | GTTGCATCTGTATTTGAGAC+AGG | + | chr7.2:11302102-11302121 | MS.gene20049:intron | 40.0% |
| ! | TCAACAACACATTTTCCTGC+TGG | + | chr7.2:11300837-11300856 | MS.gene20049:CDS | 40.0% |
| !! | CAACTTGGTTTGCAGATTGT+TGG | + | chr7.2:11302780-11302799 | MS.gene20049:intron | 40.0% |
| !! | CCTTAAACCGGTTGATAAAG+CGG | + | chr7.2:11302410-11302429 | MS.gene20049:CDS | 40.0% |
| !! | GTTGATAACGCACCAATTAG+GGG | + | chr7.2:11300885-11300904 | MS.gene20049:CDS | 40.0% |
| !! | TGTCCTTCAAGGCATTTTGA+AGG | + | chr7.2:11301972-11301991 | MS.gene20049:CDS | 40.0% |
| !!! | GTCTGTTTTGGTCGTAATGA+GGG | + | chr7.2:11302244-11302263 | MS.gene20049:intron | 40.0% |
| !!! | TGTCTGTTTTGGTCGTAATG+AGG | + | chr7.2:11302243-11302262 | MS.gene20049:intron | 40.0% |
| AACGGCAGAAAATGTTTGGG+AGG | + | chr7.2:11302817-11302836 | MS.gene20049:CDS | 45.0% | |
| AAGCTTGTCGGGACTATTTC+GGG | + | chr7.2:11300394-11300413 | MS.gene20049:intron | 45.0% | |
| ACAGGTTTCCGATAACTAGG+CGG | - | chr7.2:11300729-11300748 | None:intergenic | 45.0% | |
| ACTGGCAAAACCATGCTTCT+CGG | + | chr7.2:11300774-11300793 | MS.gene20049:CDS | 45.0% | |
| AGAAACAAGCTTAGAGACCC+TGG | - | chr7.2:11301132-11301151 | None:intergenic | 45.0% | |
| AGGGCAGCAAGTAGTCATTA+AGG | + | chr7.2:11302437-11302456 | MS.gene20049:CDS | 45.0% | |
| AGGTCGACATGATTCATGAC+TGG | + | chr7.2:11301033-11301052 | MS.gene20049:CDS | 45.0% | |
| ATCATAGGTGATGCGTACAC+TGG | + | chr7.2:11300756-11300775 | MS.gene20049:CDS | 45.0% | |
| ATGCTTCTCGGTTGTATTCG+AGG | + | chr7.2:11300786-11300805 | MS.gene20049:CDS | 45.0% | |
| ATTGGAATTGGAGTTGGAGG+AGG | + | chr7.2:11301206-11301225 | MS.gene20049:CDS | 45.0% | |
| ATTTCGGGAACAAGCTTGTC+GGG | + | chr7.2:11300409-11300428 | MS.gene20049:intron | 45.0% | |
| CCTTTCTCCGCTTTATCAAC+CGG | - | chr7.2:11302420-11302439 | None:intergenic | 45.0% | |
| GAATACCCTCCCATGTATTG+TGG | - | chr7.2:11300342-11300361 | None:intergenic | 45.0% | |
| GAGATTTATTCGTCCACCTG+TGG | + | chr7.2:11301489-11301508 | MS.gene20049:intron | 45.0% | |
| GAGGAACGGCAGAAAATGTT+TGG | + | chr7.2:11302813-11302832 | MS.gene20049:CDS | 45.0% | |
| GATTGTTGGCAGCAATTCTG+AGG | + | chr7.2:11302794-11302813 | MS.gene20049:intron | 45.0% | |
| GCAAACACAACAGCATACTC+TGG | - | chr7.2:11301730-11301749 | None:intergenic | 45.0% | |
| GGTAGTTAGATCCACAAAGG+TGG | + | chr7.2:11300057-11300076 | MS.gene20049:intron | 45.0% | |
| TAGGAGGATAAACGTACCCA+AGG | - | chr7.2:11302152-11302171 | None:intergenic | 45.0% | |
| TCACCAATGATGTTCGACAG+GGG | + | chr7.2:11303085-11303104 | MS.gene20049:CDS | 45.0% | |
| TCACCTATGATGCAGGAAAC+AGG | - | chr7.2:11300747-11300766 | None:intergenic | 45.0% | |
| TCATCATTAGGCTTGACCAC+AGG | - | chr7.2:11301508-11301527 | None:intergenic | 45.0% | |
| TCGAATACAACCGAGAAGCA+TGG | - | chr7.2:11300787-11300806 | None:intergenic | 45.0% | |
| TGGCATGATCTTGAGAATGC+AGG | - | chr7.2:11301908-11301927 | None:intergenic | 45.0% | |
| TGTGTTTGCGTTTCCTGTCA+TGG | + | chr7.2:11301741-11301760 | MS.gene20049:CDS | 45.0% | |
| TTGGGAGTAGATGTCCTTCA+AGG | + | chr7.2:11301961-11301980 | MS.gene20049:CDS | 45.0% | |
| TTTCCCCTGTCGAACATCAT+TGG | - | chr7.2:11303091-11303110 | None:intergenic | 45.0% | |
| ! | CCGCTTTATCAACCGGTTTA+AGG | - | chr7.2:11302413-11302432 | None:intergenic | 45.0% |
| ! | GCATTGATGCAGCAGTCTAA+GGG | + | chr7.2:11301086-11301105 | MS.gene20049:CDS | 45.0% |
| ! | TCCGTCTTGGATGTCTGTTT+TGG | + | chr7.2:11302232-11302251 | MS.gene20049:intron | 45.0% |
| ! | TTGGCAGCAATTCTGAGGAA+CGG | + | chr7.2:11302799-11302818 | MS.gene20049:CDS | 45.0% |
| !! | AGCATTGATGCAGCAGTCTA+AGG | + | chr7.2:11301085-11301104 | MS.gene20049:CDS | 45.0% |
| !! | CGGTTGATAAAGCGGAGAAA+GGG | + | chr7.2:11302418-11302437 | MS.gene20049:CDS | 45.0% |
| !! | TTAGGGTACAAAGCATTGGG+AGG | + | chr7.2:11299922-11299941 | MS.gene20049:intron | 45.0% |
| !! | ATAATAATAATAATAATAAG+TGG | - | chr7.2:11301380-11301399 | None:intergenic | 5.0% |
| !! | ATATATATATATATATATAG+AGG | - | chr7.2:11300467-11300448 | None:intergenic | 5.0% |
| !! | TAATAATAATAATAATAAGT+GGG | - | chr7.2:11301379-11301398 | None:intergenic | 5.0% |
| AGGATTGACACGACTCCTGA+GGG | + | chr7.2:11301553-11301572 | MS.gene20049:CDS | 50.0% | |
| CTACAGTCAACAAGCTGTGC+AGG | + | chr7.2:11301340-11301359 | MS.gene20049:CDS | 50.0% | |
| GATCGGACCCTTCTTGTGTT+TGG | - | chr7.2:11300558-11300577 | None:intergenic | 50.0% | |
| GGCATAGTGTTTGATCCTGG+TGG | - | chr7.2:11300518-11300537 | None:intergenic | 50.0% | |
| GTACGCATCACCTATGATGC+AGG | - | chr7.2:11300754-11300773 | None:intergenic | 50.0% | |
| GTGCCCACAAGTGCAATAAG+TGG | + | chr7.2:11301248-11301267 | MS.gene20049:CDS | 50.0% | |
| TCATTAGGCTTGACCACAGG+TGG | - | chr7.2:11301505-11301524 | None:intergenic | 50.0% | |
| TGATGCTGAAAGACGTCTGC+TGG | + | chr7.2:11300860-11300879 | MS.gene20049:CDS | 50.0% | |
| TGCAAGTTGCCAAGCTTCAG+AGG | - | chr7.2:11301770-11301789 | None:intergenic | 50.0% | |
| ! | TGTACTGTTCGGGAAAGCGT+CGG | - | chr7.2:11300297-11300316 | None:intergenic | 50.0% |
| ! | TGTATCAGACTGGTCCGTCT+TGG | + | chr7.2:11302219-11302238 | MS.gene20049:intron | 50.0% |
| !! | CCGGTTGATAAAGCGGAGAA+AGG | + | chr7.2:11302417-11302436 | MS.gene20049:CDS | 50.0% |
| !! | CTGCACAGCTTGTTGACTGT+AGG | - | chr7.2:11301342-11301361 | None:intergenic | 50.0% |
| !! | TCATGGTCACCTCTGAAGCT+TGG | + | chr7.2:11301758-11301777 | MS.gene20049:CDS | 50.0% |
| AAGGGAGGGCCCACAATACA+TGG | + | chr7.2:11300329-11300348 | MS.gene20049:intron | 55.0% | |
| AGGGAGGGCCCACAATACAT+GGG | + | chr7.2:11300330-11300349 | MS.gene20049:intron | 55.0% | |
| AGGGCCCACAATACATGGGA+GGG | + | chr7.2:11300334-11300353 | MS.gene20049:intron | 55.0% | |
| CAGGATTGACACGACTCCTG+AGG | + | chr7.2:11301552-11301571 | MS.gene20049:CDS | 55.0% | |
| CGTCTTTCAGCATCACCAGC+AGG | - | chr7.2:11300855-11300874 | None:intergenic | 55.0% | |
| GATTGACACGACTCCTGAGG+GGG | + | chr7.2:11301555-11301574 | MS.gene20049:CDS | 55.0% | |
| GCTTCAGAGGTGACCATGAC+AGG | - | chr7.2:11301757-11301776 | None:intergenic | 55.0% | |
| GGATTGACACGACTCCTGAG+GGG | + | chr7.2:11301554-11301573 | MS.gene20049:CDS | 55.0% | |
| GGCGGCTTAACAGTATCACC+TGG | - | chr7.2:11300705-11300724 | None:intergenic | 55.0% | |
| GGTTTCCGATAACTAGGCGG+CGG | - | chr7.2:11300726-11300745 | None:intergenic | 55.0% | |
| ! | GCATTGACACAAACCCCCTC+AGG | - | chr7.2:11301571-11301590 | None:intergenic | 55.0% |
| ! | GTGGGCCCTCCCTTTTATTG+TGG | - | chr7.2:11300323-11300342 | None:intergenic | 55.0% |
| !! | GTACTGTTCGGGAAAGCGTC+GGG | - | chr7.2:11300296-11300315 | None:intergenic | 55.0% |
| GAGGGCCCACAATACATGGG+AGG | + | chr7.2:11300333-11300352 | MS.gene20049:intron | 60.0% | |
| TTCCGATAACTAGGCGGCGG+CGG | - | chr7.2:11300723-11300742 | None:intergenic | 60.0% | |
| AGCCGCCGCCGCCTAGTTAT+CGG | + | chr7.2:11300718-11300737 | MS.gene20049:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 11299901 | 11303141 | 11299901 | ID=MS.gene20049 |
| chr7.2 | mRNA | 11299901 | 11303141 | 11299901 | ID=MS.gene20049.t1;Parent=MS.gene20049 |
| chr7.2 | exon | 11299901 | 11299916 | 11299901 | ID=MS.gene20049.t1.exon1;Parent=MS.gene20049.t1 |
| chr7.2 | CDS | 11299901 | 11299916 | 11299901 | ID=cds.MS.gene20049.t1;Parent=MS.gene20049.t1 |
| chr7.2 | exon | 11300706 | 11301361 | 11300706 | ID=MS.gene20049.t1.exon2;Parent=MS.gene20049.t1 |
| chr7.2 | CDS | 11300706 | 11301361 | 11300706 | ID=cds.MS.gene20049.t1;Parent=MS.gene20049.t1 |
| chr7.2 | exon | 11301490 | 11301993 | 11301490 | ID=MS.gene20049.t1.exon3;Parent=MS.gene20049.t1 |
| chr7.2 | CDS | 11301490 | 11301993 | 11301490 | ID=cds.MS.gene20049.t1;Parent=MS.gene20049.t1 |
| chr7.2 | exon | 11302339 | 11302458 | 11302339 | ID=MS.gene20049.t1.exon4;Parent=MS.gene20049.t1 |
| chr7.2 | CDS | 11302339 | 11302458 | 11302339 | ID=cds.MS.gene20049.t1;Parent=MS.gene20049.t1 |
| chr7.2 | exon | 11302795 | 11302863 | 11302795 | ID=MS.gene20049.t1.exon5;Parent=MS.gene20049.t1 |
| chr7.2 | CDS | 11302795 | 11302863 | 11302795 | ID=cds.MS.gene20049.t1;Parent=MS.gene20049.t1 |
| chr7.2 | exon | 11302989 | 11303141 | 11302989 | ID=MS.gene20049.t1.exon6;Parent=MS.gene20049.t1 |
| chr7.2 | CDS | 11302989 | 11303141 | 11302989 | ID=cds.MS.gene20049.t1;Parent=MS.gene20049.t1 |
| Gene Sequence |
| Protein sequence |
