Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20272.t1 | XP_003611626.2 | 98.3 | 530 | 9 | 0 | 1 | 530 | 1 | 530 | 6.6e-310 | 1072.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20272.t1 | Q9SZV0 | 77.6 | 522 | 115 | 2 | 10 | 530 | 17 | 537 | 3.9e-242 | 838.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20272.t1 | G7K3W4 | 98.3 | 530 | 9 | 0 | 1 | 530 | 1 | 530 | 4.7e-310 | 1072.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050099 | MS.gene20272 | 0.807984 | 3.87E-50 | -1.69E-46 |
| MS.gene051242 | MS.gene20272 | 0.80616 | 9.41E-50 | -1.69E-46 |
| MS.gene055971 | MS.gene20272 | 0.818752 | 1.66E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20272.t1 | MTR_5g016070 | 98.302 | 530 | 9 | 0 | 1 | 530 | 1 | 530 | 0.0 | 1074 |
| MS.gene20272.t1 | MTR_4g095410 | 72.134 | 506 | 129 | 5 | 26 | 528 | 23 | 519 | 0.0 | 759 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20272.t1 | AT4G37510 | 79.518 | 498 | 100 | 2 | 34 | 530 | 41 | 537 | 0.0 | 830 |
| MS.gene20272.t1 | AT2G48121 | 75.325 | 77 | 19 | 0 | 454 | 530 | 1 | 77 | 4.20e-34 | 124 |
| MS.gene20272.t1 | AT2G48121 | 75.000 | 56 | 14 | 0 | 475 | 530 | 20 | 75 | 8.17e-22 | 89.7 |
Find 107 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATCGTAGGTCGGTATTT+TGG | 0.109591 | 5.1:+8378700 | MS.gene20272:intron |
| GTTTGATACTTTGTTGTATT+TGG | 0.144675 | 5.1:+8377462 | MS.gene20272:CDS |
| GGACTCTCATATCTTGTTTA+TGG | 0.145537 | 5.1:+8381357 | MS.gene20272:CDS |
| AATGAGAAGTTAGTTGGTTT+TGG | 0.179441 | 5.1:-8377013 | None:intergenic |
| GCAAGATATTGTTGCTTATA+AGG | 0.188751 | 5.1:+8378890 | MS.gene20272:CDS |
| CCGATGAGGGAGAGAGTTTA+TGG | 0.193361 | 5.1:+8377628 | MS.gene20272:CDS |
| TTCCTGGCTTCGGTAATTTC+TGG | 0.213137 | 5.1:-8379302 | None:intergenic |
| GATATTTCCTTATGATAATA+TGG | 0.242859 | 5.1:+8377708 | MS.gene20272:CDS |
| TCTCATATTTAGACCTCTTT+AGG | 0.265901 | 5.1:-8381435 | None:intergenic |
| GGGGCAATCTATCTTTGTTT+TGG | 0.268972 | 5.1:+8378732 | MS.gene20272:CDS |
| TTAACAATGCCGATAAATTA+TGG | 0.272123 | 5.1:+8377350 | MS.gene20272:CDS |
| CGTTGAGGATTGTTATTTCT+AGG | 0.287707 | 5.1:-8377145 | None:intergenic |
| GACTCTCATATCTTGTTTAT+GGG | 0.294493 | 5.1:+8381358 | MS.gene20272:CDS |
| AAGAGGGTAGTTTCGGGATT+TGG | 0.302484 | 5.1:-8377083 | None:intergenic |
| ATCGATTCAGAGGAAATATA+TGG | 0.308151 | 5.1:+8379213 | MS.gene20272:CDS |
| GATGAGAATGAGAAGTTAGT+TGG | 0.309923 | 5.1:-8377019 | None:intergenic |
| ATGTTAGGTCTGGGCATTCT+AGG | 0.312555 | 5.1:+8377524 | MS.gene20272:CDS |
| AAAAGAACACGGTAGACTTC+TGG | 0.315797 | 5.1:-8378759 | None:intergenic |
| ATTCTGTCTGTCATTTCTAA+TGG | 0.317291 | 5.1:-8379278 | None:intergenic |
| GGTAGACAAGAACTTAATAA+TGG | 0.332729 | 5.1:-8377316 | None:intergenic |
| GAGAGAGTTTATGGGTTGAT+TGG | 0.340372 | 5.1:+8377637 | MS.gene20272:CDS |
| TGATTAACAGCTGTTGTGGC+TGG | 0.347745 | 5.1:-8381324 | None:intergenic |
| CTCATCTATCCATAATTTAT+CGG | 0.347797 | 5.1:-8377359 | None:intergenic |
| TGCTCAAATTTGTACTTTGA+TGG | 0.350401 | 5.1:-8380074 | None:intergenic |
| CAACGTGAAGAGGGTAGTTT+CGG | 0.362738 | 5.1:-8377090 | None:intergenic |
| AGTTTGAAAACAAGCTAAAC+TGG | 0.389097 | 5.1:+8378868 | MS.gene20272:CDS |
| AGAGCTTGGACTTGGATTGC+AGG | 0.389569 | 5.1:+8379328 | MS.gene20272:CDS |
| ATAATTTATCGGCATTGTTA+AGG | 0.390095 | 5.1:-8377348 | None:intergenic |
| AAGTCCAAGCTCTATGTTCC+TGG | 0.390461 | 5.1:-8379318 | None:intergenic |
| GGCTGGCAATCCTCATCATC+TGG | 0.399583 | 5.1:-8378801 | None:intergenic |
| AAGCTCTATGTTCCTGGCTT+CGG | 0.400967 | 5.1:-8379312 | None:intergenic |
| GAACAAAGACGAAGCATGTT+AGG | 0.401968 | 5.1:+8377509 | MS.gene20272:CDS |
| ATCCAAGTGCTCTCATAACT+TGG | 0.404958 | 5.1:-8379253 | None:intergenic |
| AATAAAACGGTGAAGCTGTT+TGG | 0.409551 | 5.1:-8381247 | None:intergenic |
| CAACAAAGTATCAAACTGTT+TGG | 0.422950 | 5.1:-8377455 | None:intergenic |
| TGGCTGGGTTTCTCCGTCTC+CGG | 0.431775 | 5.1:-8381308 | None:intergenic |
| AAGACGAAGCATGTTAGGTC+TGG | 0.432221 | 5.1:+8377514 | MS.gene20272:CDS |
| AGGAACATAGAGCTTGGACT+TGG | 0.433949 | 5.1:+8379320 | MS.gene20272:CDS |
| AGAGAGTTTATGGGTTGATT+GGG | 0.442300 | 5.1:+8377638 | MS.gene20272:CDS |
| TGAACCATCAGACACATTAG+AGG | 0.448502 | 5.1:+8377420 | MS.gene20272:CDS |
| GTAGACAAGAACTTAATAAT+GGG | 0.452131 | 5.1:-8377315 | None:intergenic |
| CCCCAAGTTATGAGAGCACT+TGG | 0.454535 | 5.1:+8379251 | MS.gene20272:CDS |
| AAACCGCTTATGAGCGCAAC+CGG | 0.458052 | 5.1:+8381289 | MS.gene20272:CDS |
| ATTTAGATGCTCCTAGGTTG+TGG | 0.458631 | 5.1:+8381166 | MS.gene20272:CDS |
| GGGGCAATATGTGCTGGAAT+TGG | 0.460146 | 5.1:+8377558 | MS.gene20272:CDS |
| GTTGTTTGCGCTCCCTAGGC+TGG | 0.460379 | 5.1:-8378818 | None:intergenic |
| TCAAGTTGTTTGCGCTCCCT+AGG | 0.462470 | 5.1:-8378822 | None:intergenic |
| GGAAGGAGAATTTGCCTAAG+TGG | 0.464839 | 5.1:+8377659 | MS.gene20272:CDS |
| AAAGTATCAAACTGTTTGGC+AGG | 0.468742 | 5.1:-8377451 | None:intergenic |
| CCTCTGAATCGATGCATGCC+AGG | 0.470072 | 5.1:-8379203 | None:intergenic |
| TTTGAGAGATTAGAATATGT+TGG | 0.474238 | 5.1:+8380110 | MS.gene20272:CDS |
| GATTAACAGCTGTTGTGGCT+GGG | 0.475840 | 5.1:-8381323 | None:intergenic |
| CGATGAGGGAGAGAGTTTAT+GGG | 0.478368 | 5.1:+8377629 | MS.gene20272:CDS |
| AAAATTAGAACTTACTTGAC+AGG | 0.483319 | 5.1:-8377760 | None:intergenic |
| ATCTTATCCATATTATCATA+AGG | 0.484697 | 5.1:-8377715 | None:intergenic |
| TCCAAGTGCTCTCATAACTT+GGG | 0.485073 | 5.1:-8379252 | None:intergenic |
| TTGGATGGGGAAAGGAGAGA+AGG | 0.485624 | 5.1:-8377044 | None:intergenic |
| TGAGCAGATTCAGCCTAAAG+AGG | 0.487808 | 5.1:+8381422 | MS.gene20272:CDS |
| AACGTGAAGAGGGTAGTTTC+GGG | 0.488808 | 5.1:-8377089 | None:intergenic |
| GATGGGGAAAGGAGAGAAGG+AGG | 0.489046 | 5.1:-8377041 | None:intergenic |
| TGAAGCATTTAGATGCTCCT+AGG | 0.492873 | 5.1:+8381160 | MS.gene20272:CDS |
| GTTGAGGATTGTTATTTCTA+GGG | 0.500027 | 5.1:-8377144 | None:intergenic |
| ATTAAGATTTGGATGGGGAA+AGG | 0.504291 | 5.1:-8377052 | None:intergenic |
| TTTCTTGGGGCAATATGTGC+TGG | 0.507263 | 5.1:+8377552 | MS.gene20272:CDS |
| CTCGAAGCGAAACAAGCGCT+TGG | 0.509306 | 5.1:+8377388 | MS.gene20272:CDS |
| TATCATCATATATAATAAAA+CGG | 0.517957 | 5.1:-8381260 | None:intergenic |
| AGTTTATGGGTTGATTGGGA+AGG | 0.522441 | 5.1:+8377642 | MS.gene20272:CDS |
| GTCTTTGTTCTCTCACACGA+AGG | 0.525988 | 5.1:-8377496 | None:intergenic |
| GCTGTTAATCAAGCTATTCA+CGG | 0.527856 | 5.1:+8381336 | MS.gene20272:CDS |
| AGACGAAGCATGTTAGGTCT+GGG | 0.530011 | 5.1:+8377515 | MS.gene20272:CDS |
| CTCTGAATCGATGCATGCCA+GGG | 0.532007 | 5.1:-8379202 | None:intergenic |
| ACACATGCTCTAAACAGCCT+TGG | 0.533681 | 5.1:-8379176 | None:intergenic |
| CTTATGAGCGCAACCGGAGA+CGG | 0.533815 | 5.1:+8381295 | MS.gene20272:CDS |
| TTCCAGAAATTACCGAAGCC+AGG | 0.536155 | 5.1:+8379300 | MS.gene20272:CDS |
| TCGATTCAGAGGAAATATAT+GGG | 0.538733 | 5.1:+8379214 | MS.gene20272:CDS |
| ACTCTCTCCCTCATCGGACC+AGG | 0.543075 | 5.1:-8377622 | None:intergenic |
| ATGATGAGGATTGCCAGCCT+AGG | 0.543609 | 5.1:+8378805 | MS.gene20272:CDS |
| AGCTTGATTAACAGCTGTTG+TGG | 0.551231 | 5.1:-8381328 | None:intergenic |
| TGATGAGGATTGCCAGCCTA+GGG | 0.552339 | 5.1:+8378806 | MS.gene20272:CDS |
| TTTAGAATGTAACGTCTTGG+TGG | 0.553258 | 5.1:-8377223 | None:intergenic |
| TGAGTAAACAGAGCATCTGC+AGG | 0.557301 | 5.1:-8379152 | None:intergenic |
| ATCGGACCAGGCAATTCCCT+CGG | 0.558254 | 5.1:-8377610 | None:intergenic |
| CCATAAACTCTCTCCCTCAT+CGG | 0.567145 | 5.1:-8377628 | None:intergenic |
| TCTCCGGTTGCGCTCATAAG+CGG | 0.572925 | 5.1:-8381292 | None:intergenic |
| ATATGTGCTGGAATTGGCAT+TGG | 0.575967 | 5.1:+8377564 | MS.gene20272:CDS |
| GAAGCCAGGAACATAGAGCT+TGG | 0.576371 | 5.1:+8379314 | MS.gene20272:CDS |
| CCTGGCATGCATCGATTCAG+AGG | 0.580371 | 5.1:+8379203 | MS.gene20272:CDS |
| ATGCTCTGTTTACTCATCCA+AGG | 0.580822 | 5.1:+8379159 | MS.gene20272:CDS |
| GGAATTGCCTGGTCCGATGA+GGG | 0.585185 | 5.1:+8377615 | MS.gene20272:CDS |
| CGGAATGGATCCAGATGATG+AGG | 0.590285 | 5.1:+8378791 | MS.gene20272:CDS |
| GCGCAAACAACTTGAAGATG+TGG | 0.590741 | 5.1:+8378830 | MS.gene20272:CDS |
| TCATCCTCTAATGTGTCTGA+TGG | 0.595112 | 5.1:-8377424 | None:intergenic |
| AGGTATCCGAGGGAATTGCC+TGG | 0.610907 | 5.1:+8377604 | MS.gene20272:CDS |
| CCAAGTGCTCTCATAACTTG+GGG | 0.611381 | 5.1:-8379251 | None:intergenic |
| CTCACACGAAGGATGCTGAA+AGG | 0.613808 | 5.1:-8377485 | None:intergenic |
| TTCTCTTGCAGCCACAACCT+AGG | 0.615311 | 5.1:-8381177 | None:intergenic |
| GTAACTGCGACAACGTGAAG+AGG | 0.624601 | 5.1:-8377100 | None:intergenic |
| GGGAATTGCCTGGTCCGATG+AGG | 0.628852 | 5.1:+8377614 | MS.gene20272:CDS |
| ATAATATGGATAAGATTGTG+AGG | 0.636146 | 5.1:+8377722 | MS.gene20272:CDS |
| GCATTGTTAAGGCGCGACGA+AGG | 0.641980 | 5.1:-8377337 | None:intergenic |
| GTAAACAGAGCATCTGCAGG+AGG | 0.645297 | 5.1:-8379149 | None:intergenic |
| CTAGCAGCTTTAATCCACTT+AGG | 0.646479 | 5.1:-8377673 | None:intergenic |
| TAACTGCGACAACGTGAAGA+GGG | 0.648251 | 5.1:-8377099 | None:intergenic |
| AATCTCTCAAAGCAAAATCG+AGG | 0.653019 | 5.1:-8380098 | None:intergenic |
| TCTGAATCGATGCATGCCAG+GGG | 0.656480 | 5.1:-8379201 | None:intergenic |
| ATTGTGAGGAGAGATAGAGA+AGG | 0.699451 | 5.1:+8377736 | MS.gene20272:CDS |
| CTGAATCGATGCATGCCAGG+GGG | 0.708978 | 5.1:-8379200 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATGTTAATATTTGTAT+TGG | + | chr5.1:8378254-8378273 | MS.gene20272:intron | 10.0% |
| !! | TATCATCATATATAATAAAA+CGG | - | chr5.1:8381263-8381282 | None:intergenic | 10.0% |
| !!! | TGTATTAATAGTTTAAAATT+AGG | + | chr5.1:8379837-8379856 | MS.gene20272:intron | 10.0% |
| !!! | TGTATTCTTTTTTTTTTTTT+TGG | + | chr5.1:8378436-8378455 | MS.gene20272:intron | 10.0% |
| !!! | TTATAATTTTGATATTATGT+TGG | + | chr5.1:8377802-8377821 | MS.gene20272:intron | 10.0% |
| !!! | TTTTTATTTTCTTAAGGATT+TGG | + | chr5.1:8381116-8381135 | MS.gene20272:intron | 15.0% |
| !! | AAAGAATACAACAGATATAA+AGG | - | chr5.1:8378426-8378445 | None:intergenic | 20.0% |
| !! | ATCTTATCCATATTATCATA+AGG | - | chr5.1:8377718-8377737 | None:intergenic | 20.0% |
| !! | GATATTTCCTTATGATAATA+TGG | + | chr5.1:8377708-8377727 | MS.gene20272:CDS | 20.0% |
| !! | GTTATAGTGATATAAACTAT+AGG | + | chr5.1:8378372-8378391 | MS.gene20272:intron | 20.0% |
| !! | TGATATTCATTTGCATAATA+TGG | + | chr5.1:8378135-8378154 | MS.gene20272:intron | 20.0% |
| !! | TTCACATAATGAATGATATT+TGG | + | chr5.1:8378278-8378297 | MS.gene20272:intron | 20.0% |
| !!! | ACAACGTTTTTATTTTCTTA+AGG | + | chr5.1:8381110-8381129 | MS.gene20272:intron | 20.0% |
| !!! | ACAAGTTTACTTCTAAAAAA+AGG | - | chr5.1:8379936-8379955 | None:intergenic | 20.0% |
| !!! | CAAGTTTACTTCTAAAAAAA+GGG | - | chr5.1:8379935-8379954 | None:intergenic | 20.0% |
| !!! | TTTTTGATTAAGATTTGGAT+GGG | - | chr5.1:8377061-8377080 | None:intergenic | 20.0% |
| ! | AAAAAAGATGATGCTAACAA+GGG | + | chr5.1:8380850-8380869 | MS.gene20272:intron | 25.0% |
| ! | AAAATTAGAACTTACTTGAC+AGG | - | chr5.1:8377763-8377782 | None:intergenic | 25.0% |
| ! | AAATGTGAAAGTAGAATGAA+AGG | - | chr5.1:8379368-8379387 | None:intergenic | 25.0% |
| ! | AATATAGAACATTCGATTGT+AGG | - | chr5.1:8379095-8379114 | None:intergenic | 25.0% |
| ! | AATTGTTTGAAAGTTACTGA+AGG | + | chr5.1:8380663-8380682 | MS.gene20272:intron | 25.0% |
| ! | ACAAATTGATTAACAGCATA+TGG | - | chr5.1:8378593-8378612 | None:intergenic | 25.0% |
| ! | ACATTGCGTAATTTATTTGA+TGG | + | chr5.1:8377987-8378006 | MS.gene20272:intron | 25.0% |
| ! | ATAATATGGATAAGATTGTG+AGG | + | chr5.1:8377722-8377741 | MS.gene20272:CDS | 25.0% |
| ! | ATAATTTATCGGCATTGTTA+AGG | - | chr5.1:8377351-8377370 | None:intergenic | 25.0% |
| ! | ATCTTGAATAGAAAAAAGTG+AGG | + | chr5.1:8380272-8380291 | MS.gene20272:intron | 25.0% |
| ! | ATTGCGTAATTTATTTGATG+GGG | + | chr5.1:8377989-8378008 | MS.gene20272:intron | 25.0% |
| ! | ATTTACATAAACAGCTAAAC+CGG | - | chr5.1:8379691-8379710 | None:intergenic | 25.0% |
| ! | CAAATTGATTAACAGCATAT+GGG | - | chr5.1:8378592-8378611 | None:intergenic | 25.0% |
| ! | CATTGCGTAATTTATTTGAT+GGG | + | chr5.1:8377988-8378007 | MS.gene20272:intron | 25.0% |
| ! | CTCATCTATCCATAATTTAT+CGG | - | chr5.1:8377362-8377381 | None:intergenic | 25.0% |
| ! | GAAGACTCTAATTTCATTAA+TGG | + | chr5.1:8380178-8380197 | MS.gene20272:intron | 25.0% |
| ! | GTAGACAAGAACTTAATAAT+GGG | - | chr5.1:8377318-8377337 | None:intergenic | 25.0% |
| ! | GTTTATATCACTATAACTCA+TGG | - | chr5.1:8378369-8378388 | None:intergenic | 25.0% |
| ! | TCAATCAAACTTTACTATGT+AGG | + | chr5.1:8377905-8377924 | MS.gene20272:intron | 25.0% |
| ! | TGAGAAGAATATAACTAACT+CGG | - | chr5.1:8377968-8377987 | None:intergenic | 25.0% |
| ! | TTAACAATGCCGATAAATTA+TGG | + | chr5.1:8377350-8377369 | MS.gene20272:CDS | 25.0% |
| ! | TTATCGCATTTCTGATAATA+GGG | - | chr5.1:8380228-8380247 | None:intergenic | 25.0% |
| ! | TTCTATTTATTATCCTTCTC+AGG | + | chr5.1:8379492-8379511 | MS.gene20272:intron | 25.0% |
| ! | TTTATCGCATTTCTGATAAT+AGG | - | chr5.1:8380229-8380248 | None:intergenic | 25.0% |
| ! | TTTGAGAGATTAGAATATGT+TGG | + | chr5.1:8380110-8380129 | MS.gene20272:CDS | 25.0% |
| !! | ATTCTTCTGAACAAATTTTG+TGG | + | chr5.1:8381210-8381229 | MS.gene20272:CDS | 25.0% |
| !! | CATTATTCTGAAAAATAGCT+TGG | + | chr5.1:8380337-8380356 | MS.gene20272:intron | 25.0% |
| !! | GTTTGATACTTTGTTGTATT+TGG | + | chr5.1:8377462-8377481 | MS.gene20272:CDS | 25.0% |
| !!! | AATTTTTCACATCTAAGATC+AGG | - | chr5.1:8380457-8380476 | None:intergenic | 25.0% |
| !!! | ATTCACTTTTCTATTGAAGT+GGG | + | chr5.1:8379969-8379988 | MS.gene20272:intron | 25.0% |
| !!! | ATTTTTCACATCTAAGATCA+GGG | - | chr5.1:8380456-8380475 | None:intergenic | 25.0% |
| !!! | CATGGAAGCTTTTTTTTTTT+TGG | - | chr5.1:8380496-8380515 | None:intergenic | 25.0% |
| !!! | GTTTTTGATTAAGATTTGGA+TGG | - | chr5.1:8377062-8377081 | None:intergenic | 25.0% |
| !!! | TATTCACTTTTCTATTGAAG+TGG | + | chr5.1:8379968-8379987 | MS.gene20272:intron | 25.0% |
| !!! | TGAATTGATTTGTTAGGATA+AGG | + | chr5.1:8378065-8378084 | MS.gene20272:intron | 25.0% |
| !!! | TGGTGTTTTTGATTAAGATT+TGG | - | chr5.1:8377066-8377085 | None:intergenic | 25.0% |
| !!! | TTCTGAAATATAAACAAGAG+AGG | + | chr5.1:8380748-8380767 | MS.gene20272:intron | 25.0% |
| !!! | TTTTGATTAAGATTTGGATG+GGG | - | chr5.1:8377060-8377079 | None:intergenic | 25.0% |
| AAAAAGATGATGCTAACAAG+GGG | + | chr5.1:8380851-8380870 | MS.gene20272:intron | 30.0% | |
| ACCAACTCAATCATATAAGA+TGG | - | chr5.1:8378623-8378642 | None:intergenic | 30.0% | |
| ACCATCTTATATGATTGAGT+TGG | + | chr5.1:8378619-8378638 | MS.gene20272:intron | 30.0% | |
| AGTTTGAAAACAAGCTAAAC+TGG | + | chr5.1:8378868-8378887 | MS.gene20272:CDS | 30.0% | |
| ATATGTTGGAAAAACGATAC+AGG | + | chr5.1:8380124-8380143 | MS.gene20272:CDS | 30.0% | |
| ATTTCTGATAATAGGGAAAG+GGG | - | chr5.1:8380221-8380240 | None:intergenic | 30.0% | |
| CAAAAAAGATGATGCTAACA+AGG | + | chr5.1:8380849-8380868 | MS.gene20272:intron | 30.0% | |
| CAAAATCACAGACACATATT+AGG | - | chr5.1:8380820-8380839 | None:intergenic | 30.0% | |
| CAATCGAATGTTCTATATTG+AGG | + | chr5.1:8379096-8379115 | MS.gene20272:intron | 30.0% | |
| CATTTCTGATAATAGGGAAA+GGG | - | chr5.1:8380222-8380241 | None:intergenic | 30.0% | |
| CCTAACAAATCAATTCAGTT+TGG | - | chr5.1:8378062-8378081 | None:intergenic | 30.0% | |
| GAAAAACCTAAGAGAAAGAT+GGG | + | chr5.1:8380515-8380534 | MS.gene20272:intron | 30.0% | |
| GAAATATAAACAAGAGAGGT+GGG | + | chr5.1:8380752-8380771 | MS.gene20272:intron | 30.0% | |
| GGATAAAAATAGATTGCAAC+AGG | + | chr5.1:8380358-8380377 | MS.gene20272:intron | 30.0% | |
| GGTAGACAAGAACTTAATAA+TGG | - | chr5.1:8377319-8377338 | None:intergenic | 30.0% | |
| GGTTTAGCTGTTTATGTAAA+TGG | + | chr5.1:8379690-8379709 | MS.gene20272:intron | 30.0% | |
| TCGATTCAGAGGAAATATAT+GGG | + | chr5.1:8379214-8379233 | MS.gene20272:CDS | 30.0% | |
| TGAAAAACCTAAGAGAAAGA+TGG | + | chr5.1:8380514-8380533 | MS.gene20272:intron | 30.0% | |
| TGAAATATAAACAAGAGAGG+TGG | + | chr5.1:8380751-8380770 | MS.gene20272:intron | 30.0% | |
| TGCTCAAATTTGTACTTTGA+TGG | - | chr5.1:8380077-8380096 | None:intergenic | 30.0% | |
| TGGAATTTCCACTTAGATAT+GGG | + | chr5.1:8380550-8380569 | MS.gene20272:intron | 30.0% | |
| TTAGTTAGATATCATGTGAC+CGG | + | chr5.1:8378012-8378031 | MS.gene20272:intron | 30.0% | |
| TTTACATAAACAGCTAAACC+GGG | - | chr5.1:8379690-8379709 | None:intergenic | 30.0% | |
| ! | AACAAACTTAAAAGTGCACA+AGG | - | chr5.1:8378312-8378331 | None:intergenic | 30.0% |
| ! | AATTTTGTGGAAGATACTTG+AGG | + | chr5.1:8381223-8381242 | MS.gene20272:CDS | 30.0% |
| ! | AGATGTTTAGTGATAGTGAT+TGG | + | chr5.1:8379536-8379555 | MS.gene20272:intron | 30.0% |
| ! | ATCGATTCAGAGGAAATATA+TGG | + | chr5.1:8379213-8379232 | MS.gene20272:CDS | 30.0% |
| ! | ATTCTGTCTGTCATTTCTAA+TGG | - | chr5.1:8379281-8379300 | None:intergenic | 30.0% |
| ! | ATTTTGTGGAAGATACTTGA+GGG | + | chr5.1:8381224-8381243 | MS.gene20272:CDS | 30.0% |
| ! | CAACAAAGTATCAAACTGTT+TGG | - | chr5.1:8377458-8377477 | None:intergenic | 30.0% |
| ! | CAAGTTTTTGTGTTGAATTC+AGG | + | chr5.1:8379626-8379645 | MS.gene20272:intron | 30.0% |
| ! | GACTCTCATATCTTGTTTAT+GGG | + | chr5.1:8381358-8381377 | MS.gene20272:CDS | 30.0% |
| ! | GCAAGATATTGTTGCTTATA+AGG | + | chr5.1:8378890-8378909 | MS.gene20272:CDS | 30.0% |
| ! | GTTTATGTAATTTTCTCACC+TGG | + | chr5.1:8379712-8379731 | MS.gene20272:intron | 30.0% |
| ! | TCTTTCTCTTAGGTTTTTCA+TGG | - | chr5.1:8380514-8380533 | None:intergenic | 30.0% |
| !! | AAACTTGAAAGTATCACTGT+AGG | - | chr5.1:8379613-8379632 | None:intergenic | 30.0% |
| !! | AATGAGAAGTTAGTTGGTTT+TGG | - | chr5.1:8377016-8377035 | None:intergenic | 30.0% |
| !! | AATGATTTTAATGAGAGCTG+TGG | - | chr5.1:8377295-8377314 | None:intergenic | 30.0% |
| !! | CACATTTGTTATTCTATCGT+AGG | + | chr5.1:8378688-8378707 | MS.gene20272:intron | 30.0% |
| !! | CCAAACTGAATTGATTTGTT+AGG | + | chr5.1:8378059-8378078 | MS.gene20272:intron | 30.0% |
| !! | GTTGAGGATTGTTATTTCTA+GGG | - | chr5.1:8377147-8377166 | None:intergenic | 30.0% |
| !! | TTTGTTATTCTATCGTAGGT+CGG | + | chr5.1:8378692-8378711 | MS.gene20272:intron | 30.0% |
| !!! | ATGAGAAGTTAGTTGGTTTT+GGG | - | chr5.1:8377015-8377034 | None:intergenic | 30.0% |
| !!! | ATTCTAGGTTGTTTTTCTTG+GGG | + | chr5.1:8377539-8377558 | MS.gene20272:CDS | 30.0% |
| !!! | CATTCTAGGTTGTTTTTCTT+GGG | + | chr5.1:8377538-8377557 | MS.gene20272:CDS | 30.0% |
| !!! | TTGACAATTCTGTTTTTACC+CGG | + | chr5.1:8379669-8379688 | MS.gene20272:intron | 30.0% |
| !!! | TTGGTGGTGATTTTGATTTT+GGG | - | chr5.1:8377210-8377229 | None:intergenic | 30.0% |
| !!! | TTTTCTTAAGGATTTGGTGA+TGG | + | chr5.1:8381122-8381141 | MS.gene20272:intron | 30.0% |
| AAACTTGTCTAGTGCATATG+CGG | + | chr5.1:8379888-8379907 | MS.gene20272:intron | 35.0% | |
| AATAAAACGGTGAAGCTGTT+TGG | - | chr5.1:8381250-8381269 | None:intergenic | 35.0% | |
| AATAGCTGCAGTACAATTAC+GGG | + | chr5.1:8380606-8380625 | MS.gene20272:intron | 35.0% | |
| AATCTCTCAAAGCAAAATCG+AGG | - | chr5.1:8380101-8380120 | None:intergenic | 35.0% | |
| ATTAAGATTTGGATGGGGAA+AGG | - | chr5.1:8377055-8377074 | None:intergenic | 35.0% | |
| CGAACACTTCAAAAAGAACA+CGG | - | chr5.1:8378773-8378792 | None:intergenic | 35.0% | |
| GAATAGAAAAAAGTGAGGTG+AGG | + | chr5.1:8380277-8380296 | MS.gene20272:intron | 35.0% | |
| GAATAGCTGCAGTACAATTA+CGG | + | chr5.1:8380605-8380624 | MS.gene20272:intron | 35.0% | |
| GACATCAAATGATCATAGAC+CGG | - | chr5.1:8378034-8378053 | None:intergenic | 35.0% | |
| GATGAGAATGAGAAGTTAGT+TGG | - | chr5.1:8377022-8377041 | None:intergenic | 35.0% | |
| GCATTTCTGATAATAGGGAA+AGG | - | chr5.1:8380223-8380242 | None:intergenic | 35.0% | |
| GCTGTTAATCAAGCTATTCA+CGG | + | chr5.1:8381336-8381355 | MS.gene20272:CDS | 35.0% | |
| GTGCAGTTGCTCATAATAAA+TGG | - | chr5.1:8378978-8378997 | None:intergenic | 35.0% | |
| GTGGAATTTCCACTTAGATA+TGG | + | chr5.1:8380549-8380568 | MS.gene20272:intron | 35.0% | |
| TGGTTTAGCTGTTTAGCAAT+CGG | + | chr5.1:8379732-8379751 | MS.gene20272:intron | 35.0% | |
| TGTCTATGTCTGTTGGTATT+TGG | + | chr5.1:8378163-8378182 | MS.gene20272:intron | 35.0% | |
| TTACTGTCTAAACAGGACAT+AGG | + | chr5.1:8378534-8378553 | MS.gene20272:intron | 35.0% | |
| TTCGTTTGTGGAAATTCTTC+AGG | + | chr5.1:8380156-8380175 | MS.gene20272:intron | 35.0% | |
| TTTGAAAGTTACTGAAGGTG+AGG | + | chr5.1:8380668-8380687 | MS.gene20272:intron | 35.0% | |
| ! | AAAGTATCAAACTGTTTGGC+AGG | - | chr5.1:8377454-8377473 | None:intergenic | 35.0% |
| ! | ACTTTCACATTTTCCCTTTC+TGG | + | chr5.1:8379376-8379395 | MS.gene20272:intron | 35.0% |
| ! | GGACTCTCATATCTTGTTTA+TGG | + | chr5.1:8381357-8381376 | MS.gene20272:CDS | 35.0% |
| ! | GGCTATTTAAAGCACAAATC+TGG | + | chr5.1:8379397-8379416 | MS.gene20272:intron | 35.0% |
| ! | GTGCTTTAAATAGCCAGAAA+GGG | - | chr5.1:8379392-8379411 | None:intergenic | 35.0% |
| ! | TGTGCTTTAAATAGCCAGAA+AGG | - | chr5.1:8379393-8379412 | None:intergenic | 35.0% |
| ! | TTAGTGATAGTGATTGGCAA+GGG | + | chr5.1:8379542-8379561 | MS.gene20272:intron | 35.0% |
| ! | TTTAGAATGTAACGTCTTGG+TGG | - | chr5.1:8377226-8377245 | None:intergenic | 35.0% |
| ! | TTTAGTGATAGTGATTGGCA+AGG | + | chr5.1:8379541-8379560 | MS.gene20272:intron | 35.0% |
| ! | TTTTCATGCCCATATCTAAG+TGG | - | chr5.1:8380561-8380580 | None:intergenic | 35.0% |
| !! | AGAGAGTTTATGGGTTGATT+GGG | + | chr5.1:8377638-8377657 | MS.gene20272:CDS | 35.0% |
| !! | AGTTCTTTTAGAAGTCGTTG+AGG | - | chr5.1:8377163-8377182 | None:intergenic | 35.0% |
| !! | CGTTGAGGATTGTTATTTCT+AGG | - | chr5.1:8377148-8377167 | None:intergenic | 35.0% |
| !! | TTCTAGGGAAGTCTTTTGTT+GGG | - | chr5.1:8377132-8377151 | None:intergenic | 35.0% |
| !! | TTTCTAGGGAAGTCTTTTGT+TGG | - | chr5.1:8377133-8377152 | None:intergenic | 35.0% |
| !!! | CGTGTTCTTTTTGAAGTGTT+CGG | + | chr5.1:8378771-8378790 | MS.gene20272:CDS | 35.0% |
| !!! | CTTGGTGGTGATTTTGATTT+TGG | - | chr5.1:8377211-8377230 | None:intergenic | 35.0% |
| !!! | GCATTCTAGGTTGTTTTTCT+TGG | + | chr5.1:8377537-8377556 | MS.gene20272:CDS | 35.0% |
| !!! | GGTTTTAGAATGTAACGTCT+TGG | - | chr5.1:8377229-8377248 | None:intergenic | 35.0% |
| !!! | TCTTTTTGAAGTGTTCGGAA+TGG | + | chr5.1:8378776-8378795 | MS.gene20272:CDS | 35.0% |
| !!! | TGAGAAGTTAGTTGGTTTTG+GGG | - | chr5.1:8377014-8377033 | None:intergenic | 35.0% |
| AAAAAAGTGAGGTGAGGAGA+CGG | + | chr5.1:8380283-8380302 | MS.gene20272:intron | 40.0% | |
| AAAAGAACACGGTAGACTTC+TGG | - | chr5.1:8378762-8378781 | None:intergenic | 40.0% | |
| AACTTGTCTAGTGCATATGC+GGG | + | chr5.1:8379889-8379908 | MS.gene20272:intron | 40.0% | |
| AGATCAGGGTCAGGAAATAA+AGG | - | chr5.1:8380442-8380461 | None:intergenic | 40.0% | |
| AGCTTGATTAACAGCTGTTG+TGG | - | chr5.1:8381331-8381350 | None:intergenic | 40.0% | |
| ATATGTGCTGGAATTGGCAT+TGG | + | chr5.1:8377564-8377583 | MS.gene20272:CDS | 40.0% | |
| ATCCAAGTGCTCTCATAACT+TGG | - | chr5.1:8379256-8379275 | None:intergenic | 40.0% | |
| ATGCTCTGTTTACTCATCCA+AGG | + | chr5.1:8379159-8379178 | MS.gene20272:CDS | 40.0% | |
| ATTGTGAGGAGAGATAGAGA+AGG | + | chr5.1:8377736-8377755 | MS.gene20272:CDS | 40.0% | |
| ATTTAACACGAAGCCTGAGA+AGG | - | chr5.1:8379508-8379527 | None:intergenic | 40.0% | |
| ATTTAGATGCTCCTAGGTTG+TGG | + | chr5.1:8381166-8381185 | MS.gene20272:CDS | 40.0% | |
| GAACAAAGACGAAGCATGTT+AGG | + | chr5.1:8377509-8377528 | MS.gene20272:CDS | 40.0% | |
| GATTGCTAAACAGCTAAACC+AGG | - | chr5.1:8379733-8379752 | None:intergenic | 40.0% | |
| GTATCACTGTAGGTGTAACA+AGG | - | chr5.1:8379603-8379622 | None:intergenic | 40.0% | |
| GTGCTCAAGATGTTGAAGAA+TGG | + | chr5.1:8378216-8378235 | MS.gene20272:intron | 40.0% | |
| TCATCCTCTAATGTGTCTGA+TGG | - | chr5.1:8377427-8377446 | None:intergenic | 40.0% | |
| TCCAAGTGCTCTCATAACTT+GGG | - | chr5.1:8379255-8379274 | None:intergenic | 40.0% | |
| TGAACCATCAGACACATTAG+AGG | + | chr5.1:8377420-8377439 | MS.gene20272:CDS | 40.0% | |
| TGCATCAAGCCTCAAAAACA+TGG | - | chr5.1:8380781-8380800 | None:intergenic | 40.0% | |
| ! | AGCTAGCTTACTGTCTAAAC+AGG | + | chr5.1:8378527-8378546 | MS.gene20272:intron | 40.0% |
| ! | AGGTACTGTTCTTTCGTTTG+TGG | + | chr5.1:8380144-8380163 | MS.gene20272:intron | 40.0% |
| ! | CTAGCAGCTTTAATCCACTT+AGG | - | chr5.1:8377676-8377695 | None:intergenic | 40.0% |
| ! | CTATCGTAGGTCGGTATTTT+GGG | + | chr5.1:8378701-8378720 | MS.gene20272:intron | 40.0% |
| ! | CTTCTAAAAAAAGGGCAACC+CGG | - | chr5.1:8379927-8379946 | None:intergenic | 40.0% |
| ! | GGTTTTCTGTCTATGTCTGT+TGG | + | chr5.1:8378156-8378175 | MS.gene20272:intron | 40.0% |
| ! | TCTATCGTAGGTCGGTATTT+TGG | + | chr5.1:8378700-8378719 | MS.gene20272:intron | 40.0% |
| ! | TGAAGCATTTAGATGCTCCT+AGG | + | chr5.1:8381160-8381179 | MS.gene20272:CDS | 40.0% |
| ! | TGGCTGAATTCTTTTTGCAG+AGG | + | chr5.1:8377584-8377603 | MS.gene20272:CDS | 40.0% |
| !! | AGTTTATGGGTTGATTGGGA+AGG | + | chr5.1:8377642-8377661 | MS.gene20272:CDS | 40.0% |
| !! | CACTTAGAACTTGAGTTGAG+AGG | - | chr5.1:8379819-8379838 | None:intergenic | 40.0% |
| !! | GAGAGAGTTTATGGGTTGAT+TGG | + | chr5.1:8377637-8377656 | MS.gene20272:CDS | 40.0% |
| !! | GGGGCAATCTATCTTTGTTT+TGG | + | chr5.1:8378732-8378751 | MS.gene20272:CDS | 40.0% |
| !! | TGAGTTGAGAGGTTCTAAAG+CGG | - | chr5.1:8379808-8379827 | None:intergenic | 40.0% |
| !! | TTACATTCTAAAACCCCCAC+TGG | + | chr5.1:8377234-8377253 | MS.gene20272:CDS | 40.0% |
| !! | TTTTGGGGAGAGTGAAAAAG+AGG | - | chr5.1:8376999-8377018 | None:intergenic | 40.0% |
| !!! | AGTTTTTTGTCATCCAGTGG+GGG | - | chr5.1:8377250-8377269 | None:intergenic | 40.0% |
| !!! | CGAGTTTTTTGTCATCCAGT+GGG | - | chr5.1:8377252-8377271 | None:intergenic | 40.0% |
| !!! | CGGTATTTTGGGCTTTGTTT+GGG | + | chr5.1:8378712-8378731 | MS.gene20272:CDS | 40.0% |
| !!! | GAGTTTTTTGTCATCCAGTG+GGG | - | chr5.1:8377251-8377270 | None:intergenic | 40.0% |
| !!! | GGTATTTTGGGCTTTGTTTG+GGG | + | chr5.1:8378713-8378732 | MS.gene20272:CDS | 40.0% |
| !!! | TCGGTATTTTGGGCTTTGTT+TGG | + | chr5.1:8378711-8378730 | MS.gene20272:CDS | 40.0% |
| AAAAAGTGAGGTGAGGAGAC+GGG | + | chr5.1:8380284-8380303 | MS.gene20272:intron | 45.0% | |
| AACCTAAGAGAAAGATGGGC+AGG | + | chr5.1:8380519-8380538 | MS.gene20272:intron | 45.0% | |
| AACGTGAAGAGGGTAGTTTC+GGG | - | chr5.1:8377092-8377111 | None:intergenic | 45.0% | |
| AAGACGAAGCATGTTAGGTC+TGG | + | chr5.1:8377514-8377533 | MS.gene20272:CDS | 45.0% | |
| AAGAGGGTAGTTTCGGGATT+TGG | - | chr5.1:8377086-8377105 | None:intergenic | 45.0% | |
| AAGATGGGCAGGGAATTATG+TGG | + | chr5.1:8380530-8380549 | MS.gene20272:intron | 45.0% | |
| AAGCTCTATGTTCCTGGCTT+CGG | - | chr5.1:8379315-8379334 | None:intergenic | 45.0% | |
| AAGTCCAAGCTCTATGTTCC+TGG | - | chr5.1:8379321-8379340 | None:intergenic | 45.0% | |
| ACCTAAGAGAAAGATGGGCA+GGG | + | chr5.1:8380520-8380539 | MS.gene20272:intron | 45.0% | |
| AGACGAAGCATGTTAGGTCT+GGG | + | chr5.1:8377515-8377534 | MS.gene20272:CDS | 45.0% | |
| AGGAACATAGAGCTTGGACT+TGG | + | chr5.1:8379320-8379339 | MS.gene20272:CDS | 45.0% | |
| ATGTTAGGTCTGGGCATTCT+AGG | + | chr5.1:8377524-8377543 | MS.gene20272:CDS | 45.0% | |
| CAACGTGAAGAGGGTAGTTT+CGG | - | chr5.1:8377093-8377112 | None:intergenic | 45.0% | |
| CAATTACGGGAAGGGATGTT+TGG | + | chr5.1:8380619-8380638 | MS.gene20272:intron | 45.0% | |
| CCAAGTGCTCTCATAACTTG+GGG | - | chr5.1:8379254-8379273 | None:intergenic | 45.0% | |
| CCATAAACTCTCTCCCTCAT+CGG | - | chr5.1:8377631-8377650 | None:intergenic | 45.0% | |
| CGATGAGGGAGAGAGTTTAT+GGG | + | chr5.1:8377629-8377648 | MS.gene20272:CDS | 45.0% | |
| CTGCAGTACAATTACGGGAA+GGG | + | chr5.1:8380611-8380630 | MS.gene20272:intron | 45.0% | |
| GATTAACAGCTGTTGTGGCT+GGG | - | chr5.1:8381326-8381345 | None:intergenic | 45.0% | |
| GCAGAAAACAAAGCTGCAAG+TGG | - | chr5.1:8380052-8380071 | None:intergenic | 45.0% | |
| GCGCAAACAACTTGAAGATG+TGG | + | chr5.1:8378830-8378849 | MS.gene20272:CDS | 45.0% | |
| GGAAGGAGAATTTGCCTAAG+TGG | + | chr5.1:8377659-8377678 | MS.gene20272:CDS | 45.0% | |
| GTATTGGAGACTTTGAGCAG+TGG | + | chr5.1:8380697-8380716 | MS.gene20272:intron | 45.0% | |
| GTCTTTGTTCTCTCACACGA+AGG | - | chr5.1:8377499-8377518 | None:intergenic | 45.0% | |
| TAACTGCGACAACGTGAAGA+GGG | - | chr5.1:8377102-8377121 | None:intergenic | 45.0% | |
| TCATGTAGTGAACTGCGCAA+AGG | - | chr5.1:8379775-8379794 | None:intergenic | 45.0% | |
| TGAGCAGATTCAGCCTAAAG+AGG | + | chr5.1:8381422-8381441 | MS.gene20272:CDS | 45.0% | |
| TGATTAACAGCTGTTGTGGC+TGG | - | chr5.1:8381327-8381346 | None:intergenic | 45.0% | |
| TTCCAGAAATTACCGAAGCC+AGG | + | chr5.1:8379300-8379319 | MS.gene20272:CDS | 45.0% | |
| TTCCTGGCTTCGGTAATTTC+TGG | - | chr5.1:8379305-8379324 | None:intergenic | 45.0% | |
| TTTCTTGGGGCAATATGTGC+TGG | + | chr5.1:8377552-8377571 | MS.gene20272:CDS | 45.0% | |
| ! | ACACATGCTCTAAACAGCCT+TGG | - | chr5.1:8379179-8379198 | None:intergenic | 45.0% |
| ! | ATGATGCTAACAAGGGGCAT+CGG | + | chr5.1:8380857-8380876 | MS.gene20272:intron | 45.0% |
| ! | TCACATCTAAGATCAGGGTC+AGG | - | chr5.1:8380451-8380470 | None:intergenic | 45.0% |
| ! | TGAGTAAACAGAGCATCTGC+AGG | - | chr5.1:8379155-8379174 | None:intergenic | 45.0% |
| !!! | CTTTTTGCAGAGGTATCCGA+GGG | + | chr5.1:8377594-8377613 | MS.gene20272:CDS | 45.0% |
| !!! | GCGAGTTTTTTGTCATCCAG+TGG | - | chr5.1:8377253-8377272 | None:intergenic | 45.0% |
| !!! | TCTTTTTGCAGAGGTATCCG+AGG | + | chr5.1:8377593-8377612 | MS.gene20272:CDS | 45.0% |
| AAAAGTGAGGTGAGGAGACG+GGG | + | chr5.1:8380285-8380304 | MS.gene20272:intron | 50.0% | |
| AAACCGCTTATGAGCGCAAC+CGG | + | chr5.1:8381289-8381308 | MS.gene20272:CDS | 50.0% | |
| AGAGCTTGGACTTGGATTGC+AGG | + | chr5.1:8379328-8379347 | MS.gene20272:CDS | 50.0% | |
| ATGATGAGGATTGCCAGCCT+AGG | + | chr5.1:8378805-8378824 | MS.gene20272:CDS | 50.0% | |
| CCGATGAGGGAGAGAGTTTA+TGG | + | chr5.1:8377628-8377647 | MS.gene20272:CDS | 50.0% | |
| CGGAATGGATCCAGATGATG+AGG | + | chr5.1:8378791-8378810 | MS.gene20272:CDS | 50.0% | |
| CTCACACGAAGGATGCTGAA+AGG | - | chr5.1:8377488-8377507 | None:intergenic | 50.0% | |
| CTCTGAATCGATGCATGCCA+GGG | - | chr5.1:8379205-8379224 | None:intergenic | 50.0% | |
| GAAGCCAGGAACATAGAGCT+TGG | + | chr5.1:8379314-8379333 | MS.gene20272:CDS | 50.0% | |
| GAAGGTGAGGCTTGAGGTAT+TGG | + | chr5.1:8380681-8380700 | MS.gene20272:intron | 50.0% | |
| GCTGCAGTACAATTACGGGA+AGG | + | chr5.1:8380610-8380629 | MS.gene20272:intron | 50.0% | |
| GGGGCAATATGTGCTGGAAT+TGG | + | chr5.1:8377558-8377577 | MS.gene20272:CDS | 50.0% | |
| GTAACTGCGACAACGTGAAG+AGG | - | chr5.1:8377103-8377122 | None:intergenic | 50.0% | |
| GTTACTGAAGGTGAGGCTTG+AGG | + | chr5.1:8380675-8380694 | MS.gene20272:intron | 50.0% | |
| TCCCTGCCCATCTTTCTCTT+AGG | - | chr5.1:8380524-8380543 | None:intergenic | 50.0% | |
| TCTGAATCGATGCATGCCAG+GGG | - | chr5.1:8379204-8379223 | None:intergenic | 50.0% | |
| TGATGAGGATTGCCAGCCTA+GGG | + | chr5.1:8378806-8378825 | MS.gene20272:CDS | 50.0% | |
| TGGCCTCTCTTGCTAGAGTA+CGG | + | chr5.1:8379417-8379436 | MS.gene20272:intron | 50.0% | |
| TTCTCTTGCAGCCACAACCT+AGG | - | chr5.1:8381180-8381199 | None:intergenic | 50.0% | |
| TTGATGCAGAGCGAGACACA+GGG | + | chr5.1:8380793-8380812 | MS.gene20272:intron | 50.0% | |
| TTGGATGGGGAAAGGAGAGA+AGG | - | chr5.1:8377047-8377066 | None:intergenic | 50.0% | |
| ! | GTAAACAGAGCATCTGCAGG+AGG | - | chr5.1:8379152-8379171 | None:intergenic | 50.0% |
| ! | TCAAGTTGTTTGCGCTCCCT+AGG | - | chr5.1:8378825-8378844 | None:intergenic | 50.0% |
| ! | TTTAGAGCATGTGTTCCCCC+TGG | + | chr5.1:8379185-8379204 | MS.gene20272:CDS | 50.0% |
| !! | CCCCAAGTTATGAGAGCACT+TGG | + | chr5.1:8379251-8379270 | MS.gene20272:CDS | 50.0% |
| !! | GGTGGGTGACCATGTTTTTG+AGG | + | chr5.1:8380769-8380788 | MS.gene20272:intron | 50.0% |
| !! | TGATGCTAACAAGGGGCATC+GGG | + | chr5.1:8380858-8380877 | MS.gene20272:intron | 50.0% |
| AGGTATCCGAGGGAATTGCC+TGG | + | chr5.1:8377604-8377623 | MS.gene20272:CDS | 55.0% | |
| ATCGGACCAGGCAATTCCCT+CGG | - | chr5.1:8377613-8377632 | None:intergenic | 55.0% | |
| CAGCCGTACTCTAGCAAGAG+AGG | - | chr5.1:8379423-8379442 | None:intergenic | 55.0% | |
| CCTCTGAATCGATGCATGCC+AGG | - | chr5.1:8379206-8379225 | None:intergenic | 55.0% | |
| CGAAACCTTATGCGAGCCGT+TGG | + | chr5.1:8380948-8380967 | MS.gene20272:intron | 55.0% | |
| CTCGAAGCGAAACAAGCGCT+TGG | + | chr5.1:8377388-8377407 | MS.gene20272:CDS | 55.0% | |
| CTGAATCGATGCATGCCAGG+GGG | - | chr5.1:8379203-8379222 | None:intergenic | 55.0% | |
| CTTATGAGCGCAACCGGAGA+CGG | + | chr5.1:8381295-8381314 | MS.gene20272:CDS | 55.0% | |
| CTTGATGCAGAGCGAGACAC+AGG | + | chr5.1:8380792-8380811 | MS.gene20272:intron | 55.0% | |
| GATGGGGAAAGGAGAGAAGG+AGG | - | chr5.1:8377044-8377063 | None:intergenic | 55.0% | |
| GCATTGTTAAGGCGCGACGA+AGG | - | chr5.1:8377340-8377359 | None:intergenic | 55.0% | |
| GGAATTGCCTGGTCCGATGA+GGG | + | chr5.1:8377615-8377634 | MS.gene20272:CDS | 55.0% | |
| GGCTGGCAATCCTCATCATC+TGG | - | chr5.1:8378804-8378823 | None:intergenic | 55.0% | |
| GGTTTCGCCTTCCAGAAGCT+CGG | - | chr5.1:8380935-8380954 | None:intergenic | 55.0% | |
| GTTTCGCCTTCCAGAAGCTC+GGG | - | chr5.1:8380934-8380953 | None:intergenic | 55.0% | |
| TCTCCGGTTGCGCTCATAAG+CGG | - | chr5.1:8381295-8381314 | None:intergenic | 55.0% | |
| TGATGCAGAGCGAGACACAG+GGG | + | chr5.1:8380794-8380813 | MS.gene20272:intron | 55.0% | |
| TGCTTCCAACGGCTCGCATA+AGG | - | chr5.1:8380956-8380975 | None:intergenic | 55.0% | |
| !! | CCTGGCATGCATCGATTCAG+AGG | + | chr5.1:8379203-8379222 | MS.gene20272:CDS | 55.0% |
| ACTCTCTCCCTCATCGGACC+AGG | - | chr5.1:8377625-8377644 | None:intergenic | 60.0% | |
| CATCGGGACAGATGCTGAGG+GGG | + | chr5.1:8380874-8380893 | MS.gene20272:intron | 60.0% | |
| CTGAGTGTCTCCCGAGCTTC+TGG | + | chr5.1:8380921-8380940 | MS.gene20272:intron | 60.0% | |
| GCATCGGGACAGATGCTGAG+GGG | + | chr5.1:8380873-8380892 | MS.gene20272:intron | 60.0% | |
| GGGAATTGCCTGGTCCGATG+AGG | + | chr5.1:8377614-8377633 | MS.gene20272:CDS | 60.0% | |
| GTGTCTCCCGAGCTTCTGGA+AGG | + | chr5.1:8380925-8380944 | MS.gene20272:intron | 60.0% | |
| GTTGTTTGCGCTCCCTAGGC+TGG | - | chr5.1:8378821-8378840 | None:intergenic | 60.0% | |
| TGGCTGGGTTTCTCCGTCTC+CGG | - | chr5.1:8381311-8381330 | None:intergenic | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr5.1:8379905-8379924 | MS.gene20272:intron | 60.0% |
| ! | GGCATCGGGACAGATGCTGA+GGG | + | chr5.1:8380872-8380891 | MS.gene20272:intron | 60.0% |
| GAGACGGGGACTGGGACTCA+TGG | + | chr5.1:8380299-8380318 | MS.gene20272:intron | 65.0% | |
| GAGGTGAGGAGACGGGGACT+GGG | + | chr5.1:8380291-8380310 | MS.gene20272:intron | 65.0% | |
| TGAGGTGAGGAGACGGGGAC+TGG | + | chr5.1:8380290-8380309 | MS.gene20272:intron | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr5.1:8379906-8379925 | MS.gene20272:intron | 65.0% |
| !! | GGGCATCGGGACAGATGCTG+AGG | + | chr5.1:8380871-8380890 | MS.gene20272:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 8376983 | 8381449 | 8376983 | ID=MS.gene20272 |
| chr5.1 | mRNA | 8376983 | 8381449 | 8376983 | ID=MS.gene20272.t1;Parent=MS.gene20272 |
| chr5.1 | exon | 8376983 | 8377767 | 8376983 | ID=MS.gene20272.t1.exon1;Parent=MS.gene20272.t1 |
| chr5.1 | CDS | 8376983 | 8377767 | 8376983 | ID=cds.MS.gene20272.t1;Parent=MS.gene20272.t1 |
| chr5.1 | exon | 8378710 | 8378911 | 8378710 | ID=MS.gene20272.t1.exon2;Parent=MS.gene20272.t1 |
| chr5.1 | CDS | 8378710 | 8378911 | 8378710 | ID=cds.MS.gene20272.t1;Parent=MS.gene20272.t1 |
| chr5.1 | exon | 8379149 | 8379349 | 8379149 | ID=MS.gene20272.t1.exon3;Parent=MS.gene20272.t1 |
| chr5.1 | CDS | 8379149 | 8379349 | 8379149 | ID=cds.MS.gene20272.t1;Parent=MS.gene20272.t1 |
| chr5.1 | exon | 8380059 | 8380145 | 8380059 | ID=MS.gene20272.t1.exon4;Parent=MS.gene20272.t1 |
| chr5.1 | CDS | 8380059 | 8380145 | 8380059 | ID=cds.MS.gene20272.t1;Parent=MS.gene20272.t1 |
| chr5.1 | exon | 8381132 | 8381449 | 8381132 | ID=MS.gene20272.t1.exon5;Parent=MS.gene20272.t1 |
| chr5.1 | CDS | 8381132 | 8381449 | 8381132 | ID=cds.MS.gene20272.t1;Parent=MS.gene20272.t1 |
| Gene Sequence |
| Protein sequence |
