Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20349.t1 | XP_003611167.1 | 98.3 | 471 | 7 | 1 | 1 | 470 | 1 | 471 | 2.80E-267 | 930.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20349.t1 | P54873 | 76.9 | 468 | 98 | 2 | 5 | 470 | 2 | 461 | 2.1e-215 | 749.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20349.t1 | G7KER8 | 98.3 | 471 | 7 | 1 | 1 | 470 | 1 | 471 | 2.0e-267 | 930.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055251 | MS.gene20349 | 0.80608 | 9.79E-50 | -1.69E-46 |
| MS.gene060077 | MS.gene20349 | 0.830038 | 3.68E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20349.t1 | MTR_5g011040 | 98.301 | 471 | 7 | 1 | 1 | 470 | 1 | 471 | 0.0 | 963 |
| MS.gene20349.t1 | MTR_5g011040 | 98.504 | 401 | 5 | 1 | 1 | 400 | 1 | 401 | 0.0 | 822 |
| MS.gene20349.t1 | MTR_6g089570 | 79.596 | 446 | 91 | 0 | 7 | 452 | 8 | 453 | 0.0 | 775 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20349.t1 | AT4G11820 | 76.923 | 468 | 98 | 2 | 5 | 470 | 2 | 461 | 0.0 | 773 |
| MS.gene20349.t1 | AT4G11820 | 75.604 | 414 | 91 | 2 | 59 | 470 | 1 | 406 | 0.0 | 670 |
| MS.gene20349.t1 | AT4G11820 | 75.604 | 414 | 91 | 2 | 59 | 470 | 1 | 406 | 0.0 | 670 |
Find 100 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTGCTTTCAAAAGAAAT+AGG | 0.210965 | 5.1:-4646712 | None:intergenic |
| GTCTGGAACAAACAGAAATA+TGG | 0.263458 | 5.1:+4646338 | MS.gene20349:intron |
| GCAATGTTTGACAAACTAAA+TGG | 0.286875 | 5.1:-4648502 | None:intergenic |
| CTTTGTTCAATTGTGTCAAT+TGG | 0.290856 | 5.1:+4646417 | MS.gene20349:CDS |
| ATTTGCTTTCAAAAGAAATA+GGG | 0.301513 | 5.1:-4646711 | None:intergenic |
| GCTGCTATTGCTATGCTAAT+TGG | 0.307008 | 5.1:+4646679 | MS.gene20349:CDS |
| GTCTGAACTACCTTGTTATA+AGG | 0.329972 | 5.1:-4647661 | None:intergenic |
| TGATTATGATTGTAGCTCTA+AGG | 0.346847 | 5.1:+4647967 | MS.gene20349:intron |
| TGCTTTGGTATCAAAGTAGA+TGG | 0.354413 | 5.1:-4648229 | None:intergenic |
| TCATCGGATAAAGTTGTAAA+AGG | 0.369541 | 5.1:-4648016 | None:intergenic |
| AAGCAAGGACAGCAGCCTTT+TGG | 0.374475 | 5.1:+4649037 | MS.gene20349:CDS |
| CTTGCTTGTTACATAATCCT+TGG | 0.405156 | 5.1:-4649021 | None:intergenic |
| CCCTCCTAACTGCGTTCAAC+AGG | 0.405990 | 5.1:+4644672 | MS.gene20349:CDS |
| CTGCATCAAGAATGACTTGA+TGG | 0.406438 | 5.1:-4645885 | None:intergenic |
| ATAGAGGCTTTGCAACTTGT+TGG | 0.416177 | 5.1:-4648189 | None:intergenic |
| CTCATGATGGTGCGAGTAAA+GGG | 0.416361 | 5.1:+4645083 | MS.gene20349:CDS |
| TCCAGACGACCAATCTGTTT+AGG | 0.418016 | 5.1:-4645827 | None:intergenic |
| TCCTAAACAGATTGGTCGTC+TGG | 0.418362 | 5.1:+4645826 | MS.gene20349:CDS |
| TAGAGGCTTTGCAACTTGTT+GGG | 0.419718 | 5.1:-4648188 | None:intergenic |
| CATTGAAACACTGAAGCTAA+TGG | 0.420891 | 5.1:+4648983 | MS.gene20349:CDS |
| GGATGCAAATGCTGCATAGA+TGG | 0.426955 | 5.1:-4648275 | None:intergenic |
| GTTACCTGTTGAACGCAGTT+AGG | 0.430235 | 5.1:-4644676 | None:intergenic |
| ATTCTTGATGCAGATCTTTG+AGG | 0.432466 | 5.1:+4645895 | MS.gene20349:CDS |
| ATTCCAACGTTCTTTGCTGC+TGG | 0.435491 | 5.1:-4644628 | None:intergenic |
| TACATGTTACCAACTTGCTT+TGG | 0.440980 | 5.1:-4648244 | None:intergenic |
| TCAAAAGAAATAGGGGCATC+AGG | 0.453354 | 5.1:-4646703 | None:intergenic |
| CAAATTGAGGGGAAGTCATA+TGG | 0.453589 | 5.1:+4646729 | MS.gene20349:CDS |
| GCTCCTCCGGTAGGTCGAGC+AGG | 0.463854 | 5.1:-4646655 | None:intergenic |
| AATTCATGGGATGGACGTTA+TGG | 0.464557 | 5.1:+4646449 | MS.gene20349:CDS |
| AGCAATAGCAGCAGCTCCTC+CGG | 0.467184 | 5.1:-4646668 | None:intergenic |
| AGTAAAGGGAAATATACAAT+TGG | 0.468493 | 5.1:+4645097 | MS.gene20349:CDS |
| TTTGATGCAGGAAGCATTGG+AGG | 0.489358 | 5.1:+4645060 | MS.gene20349:intron |
| TTTGTTCAATTGTGTCAATT+GGG | 0.489475 | 5.1:+4646418 | MS.gene20349:CDS |
| TGTACCTTCTCATCGTATAG+AGG | 0.489750 | 5.1:-4648205 | None:intergenic |
| ATTGGGTGGAGAGCAATTCA+TGG | 0.491422 | 5.1:+4646435 | MS.gene20349:CDS |
| CTTTCTCAGGTCTATGCTGA+AGG | 0.492679 | 5.1:+4646631 | MS.gene20349:intron |
| ATGACGAGAGCTACCAAAGC+CGG | 0.493439 | 5.1:+4648035 | MS.gene20349:CDS |
| TATGGAAATACTGATATTGA+AGG | 0.498987 | 5.1:+4646356 | MS.gene20349:CDS |
| GCTCATGATGGTGCGAGTAA+AGG | 0.499177 | 5.1:+4645082 | MS.gene20349:CDS |
| GAAGGTCCTGCTCGACCTAC+CGG | 0.502083 | 5.1:+4646649 | MS.gene20349:CDS |
| TGGTCTTCAGCGACTTCTTG+AGG | 0.503836 | 5.1:+4647864 | MS.gene20349:CDS |
| TTTCAGCAACATCCATCACT+TGG | 0.507070 | 5.1:-4648525 | None:intergenic |
| AGGAAAACATTGTGGCAGTT+AGG | 0.515627 | 5.1:-4648456 | None:intergenic |
| TCGGTGAGAAAGAATGTGCC+TGG | 0.516526 | 5.1:-4649062 | None:intergenic |
| TTTGCTTTCAAAAGAAATAG+GGG | 0.519392 | 5.1:-4646710 | None:intergenic |
| GCGACTTCTTGAGGAATCCC+AGG | 0.520791 | 5.1:+4647873 | MS.gene20349:CDS |
| AGTGTTTCAATGAACTTCTG+TGG | 0.521063 | 5.1:-4648972 | None:intergenic |
| CCAAAGCCGGGATCTTGAAA+AGG | 0.524815 | 5.1:+4648048 | MS.gene20349:CDS |
| ACCTGTTGAACGCAGTTAGG+AGG | 0.526299 | 5.1:-4644673 | None:intergenic |
| GGGTATTCACTAGCAAGGTC+AGG | 0.527013 | 5.1:-4646775 | None:intergenic |
| TTTAGTTTCACGTAATTGCA+AGG | 0.530355 | 5.1:-4648476 | None:intergenic |
| TCAACTAATGCTTGCTATGG+AGG | 0.531555 | 5.1:+4646386 | MS.gene20349:CDS |
| GATTCAACTAATGCTTGCTA+TGG | 0.539495 | 5.1:+4646383 | MS.gene20349:CDS |
| ATATTATTCTCATACGGAAG+TGG | 0.541033 | 5.1:+4648433 | MS.gene20349:CDS |
| GAGATCGATCCTAAACAGAT+TGG | 0.548622 | 5.1:+4645818 | MS.gene20349:CDS |
| TGACGAGAGCTACCAAAGCC+GGG | 0.549767 | 5.1:+4648036 | MS.gene20349:CDS |
| GGGAAATATACAATTGGACT+TGG | 0.552530 | 5.1:+4645103 | MS.gene20349:CDS |
| GAGGTTACCAAAGAAAAGCT+TGG | 0.555142 | 5.1:+4647992 | MS.gene20349:CDS |
| TGATTGTAGCTCTAAGGATG+AGG | 0.558354 | 5.1:+4647973 | MS.gene20349:intron |
| GTCAAACATTGCCCAAGTGA+TGG | 0.563325 | 5.1:+4648513 | MS.gene20349:CDS |
| ACAGACAAACCGTTGACTGC+AGG | 0.565692 | 5.1:-4649143 | None:intergenic |
| CACTGAAGCTAATGGAACAT+AGG | 0.569121 | 5.1:+4648991 | MS.gene20349:CDS |
| TGCATAGAATCTACGATACA+TGG | 0.569318 | 5.1:-4649093 | None:intergenic |
| GTCAACGGTTTGTCTGTCAA+TGG | 0.569594 | 5.1:+4649149 | MS.gene20349:CDS |
| TTCAGCAACATCCATCACTT+GGG | 0.574544 | 5.1:-4648524 | None:intergenic |
| AGGGTGATATTATTCTCATA+CGG | 0.581841 | 5.1:+4648427 | MS.gene20349:CDS |
| GGAACATAGGTATGGTGCCA+AGG | 0.583616 | 5.1:+4649004 | MS.gene20349:CDS |
| AAGCTAATGGAACATAGGTA+TGG | 0.584877 | 5.1:+4648996 | MS.gene20349:CDS |
| TTCACAAACATGTTACCTCA+TGG | 0.585332 | 5.1:+4647067 | MS.gene20349:CDS |
| CCTGTTGAACGCAGTTAGGA+GGG | 0.587798 | 5.1:-4644672 | None:intergenic |
| TTTGTGCTGTAGGTTGTCGA+CGG | 0.588804 | 5.1:+4647038 | MS.gene20349:intron |
| CTACCTTGTTATAAGGAGAG+TGG | 0.592935 | 5.1:-4647654 | None:intergenic |
| GCTTTGGTAGCTCTCGTCAT+CGG | 0.595190 | 5.1:-4648032 | None:intergenic |
| AGAATGTGCCTGGAGCCAAA+AGG | 0.595474 | 5.1:-4649052 | None:intergenic |
| AATTTGACTCCTGCAGTCAA+CGG | 0.595715 | 5.1:+4649134 | MS.gene20349:CDS |
| GTGGAGAGCAATTCATGGGA+TGG | 0.595820 | 5.1:+4646440 | MS.gene20349:CDS |
| CAGATTGGTCGTCTGGAAGT+CGG | 0.598190 | 5.1:+4645833 | MS.gene20349:CDS |
| TTGGGTGGAGAGCAATTCAT+GGG | 0.604306 | 5.1:+4646436 | MS.gene20349:CDS |
| ACTTTGATACCAAAGCAAGT+TGG | 0.615714 | 5.1:+4648235 | MS.gene20349:CDS |
| ACGATACATGGTATCGACTT+CGG | 0.616243 | 5.1:-4649081 | None:intergenic |
| GTTCAATTGTGTCAATTGGG+TGG | 0.616456 | 5.1:+4646421 | MS.gene20349:CDS |
| GTTTCAATGAACTTCTGTGG+AGG | 0.619312 | 5.1:-4648969 | None:intergenic |
| GAAGCATTGGAGGCTCATGA+TGG | 0.621839 | 5.1:+4645070 | MS.gene20349:CDS |
| ATTCCACTCTCCTTATAACA+AGG | 0.625771 | 5.1:+4647651 | MS.gene20349:CDS |
| TGCAGATATGAGAAACACGA+GGG | 0.625881 | 5.1:+4647592 | MS.gene20349:intron |
| AAAGCCTCTATACGATGAGA+AGG | 0.630768 | 5.1:+4648201 | MS.gene20349:CDS |
| GGTCCTGCTCGACCTACCGG+AGG | 0.636919 | 5.1:+4646652 | MS.gene20349:CDS |
| TGACCTTGCTAGTGAATACC+CGG | 0.639253 | 5.1:+4646777 | MS.gene20349:CDS |
| TTGCATCTGCAGTTTGACAG+TGG | 0.639309 | 5.1:+4645772 | MS.gene20349:intron |
| TTACCGGGTATTCACTAGCA+AGG | 0.643611 | 5.1:-4646780 | None:intergenic |
| GCACCAGCAGCAAAGAACGT+TGG | 0.645271 | 5.1:+4644625 | MS.gene20349:CDS |
| TTGAAGATGTCATCTCAATG+AGG | 0.649419 | 5.1:+4645155 | MS.gene20349:CDS |
| CAAGGATTATGTAACAAGCA+AGG | 0.651946 | 5.1:+4649022 | MS.gene20349:CDS |
| ATAGCAGCAGCTCCTCCGGT+AGG | 0.656075 | 5.1:-4646664 | None:intergenic |
| AAAGTTGAAGTCAAGACATG+AGG | 0.659927 | 5.1:+4648546 | MS.gene20349:CDS |
| TTGCAGATATGAGAAACACG+AGG | 0.684755 | 5.1:+4647591 | MS.gene20349:intron |
| TAATTGCAAGGAAAACATTG+TGG | 0.695304 | 5.1:-4648464 | None:intergenic |
| ATTGACACAATTGAACAAAG+CGG | 0.706527 | 5.1:-4646414 | None:intergenic |
| AAATGCTGCATAGATGGACG+CGG | 0.723317 | 5.1:-4648269 | None:intergenic |
| AGCAAGTATCAAGAGCCATG+AGG | 0.727431 | 5.1:-4647082 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAAAAATATTAATTAACT+AGG | + | chr5.1:4647169-4647188 | MS.gene20349:intron | 10.0% |
| !! | TGAAAAATATTAATTAACTA+GGG | + | chr5.1:4647170-4647189 | MS.gene20349:intron | 10.0% |
| !!! | TATTTATTTATTTTTTTGTC+TGG | + | chr5.1:4646321-4646340 | MS.gene20349:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTAAGTCT+TGG | + | chr5.1:4645606-4645625 | MS.gene20349:intron | 10.0% |
| !! | AAAAAAAAAAAAAAAATCCC+AGG | - | chr5.1:4645599-4645618 | None:intergenic | 15.0% |
| !! | AAAAATATTAATTAACTAGG+GGG | + | chr5.1:4647172-4647191 | MS.gene20349:intron | 15.0% |
| !! | ATGATTGTAATTTAGTATTT+CGG | + | chr5.1:4647781-4647800 | MS.gene20349:intron | 15.0% |
| !! | CAAAAACATAATTAGATATT+TGG | - | chr5.1:4647574-4647593 | None:intergenic | 15.0% |
| !! | GAAAAATATTAATTAACTAG+GGG | + | chr5.1:4647171-4647190 | MS.gene20349:intron | 15.0% |
| !! | GTAAATATTTATTAGAAAAC+AGG | - | chr5.1:4648382-4648401 | None:intergenic | 15.0% |
| !!! | GTTTTTTCACTTTTTAATTA+AGG | + | chr5.1:4645024-4645043 | MS.gene20349:intron | 15.0% |
| !!! | TACAATGTTATTTATTTTGA+AGG | + | chr5.1:4648162-4648181 | MS.gene20349:intron | 15.0% |
| !! | AAAAGTGAAAAAACAAAAAG+AGG | - | chr5.1:4645018-4645037 | None:intergenic | 20.0% |
| !! | AAAATATATAGAGCATATAC+AGG | - | chr5.1:4647736-4647755 | None:intergenic | 20.0% |
| !! | AAATATATAGAGCATATACA+GGG | - | chr5.1:4647735-4647754 | None:intergenic | 20.0% |
| !! | AATCATTCAATTAATTCTAC+TGG | + | chr5.1:4644804-4644823 | MS.gene20349:intron | 20.0% |
| !! | ACAATAAAAAATTTCACCAA+GGG | - | chr5.1:4647289-4647308 | None:intergenic | 20.0% |
| !! | AGGTTTATTATTACTGAATA+TGG | - | chr5.1:4646535-4646554 | None:intergenic | 20.0% |
| !! | AGTTTAAATACTCAAAACTA+AGG | - | chr5.1:4646024-4646043 | None:intergenic | 20.0% |
| !! | ATTGAATGATTAGGAAATAA+CGG | - | chr5.1:4644795-4644814 | None:intergenic | 20.0% |
| !! | ATTTGCTTTCAAAAGAAATA+GGG | - | chr5.1:4646714-4646733 | None:intergenic | 20.0% |
| !! | GTAGAATTAATTGAATGATT+AGG | - | chr5.1:4644804-4644823 | None:intergenic | 20.0% |
| !! | TACAATAAAAAATTTCACCA+AGG | - | chr5.1:4647290-4647309 | None:intergenic | 20.0% |
| !!! | AAAATTAAAAAGTTTTCCAG+AGG | - | chr5.1:4647917-4647936 | None:intergenic | 20.0% |
| !!! | AATTTGCTTTCAAAAGAAAT+AGG | - | chr5.1:4646715-4646734 | None:intergenic | 20.0% |
| !!! | AATTTTTTAGTTCAGAATCA+AGG | - | chr5.1:4646555-4646574 | None:intergenic | 20.0% |
| !!! | ATGTTAGTTTATTAAAATGC+TGG | + | chr5.1:4648859-4648878 | MS.gene20349:intron | 20.0% |
| !!! | TAGTTTTGAGTATTTAAACT+TGG | + | chr5.1:4646024-4646043 | MS.gene20349:intron | 20.0% |
| !!! | TTTAATTTTGTTTTTGATGC+AGG | + | chr5.1:4645048-4645067 | MS.gene20349:intron | 20.0% |
| !!! | TTTTTATTCAGTTAATGCAT+AGG | + | chr5.1:4647933-4647952 | MS.gene20349:intron | 20.0% |
| ! | AAAATTAAAACACCTTGACA+AGG | - | chr5.1:4645521-4645540 | None:intergenic | 25.0% |
| ! | AGTAAAGGGAAATATACAAT+TGG | + | chr5.1:4645097-4645116 | MS.gene20349:CDS | 25.0% |
| ! | AGTCTTAGTTAGTACAAATT+TGG | - | chr5.1:4647515-4647534 | None:intergenic | 25.0% |
| ! | ATCTAGAAATGATGAAAAGA+AGG | - | chr5.1:4644714-4644733 | None:intergenic | 25.0% |
| ! | ATGTGTGTTTAATGTTTGAT+AGG | + | chr5.1:4645677-4645696 | MS.gene20349:intron | 25.0% |
| ! | ATTGTATTAGAAAGCTATGT+AGG | - | chr5.1:4646302-4646321 | None:intergenic | 25.0% |
| ! | CTAACATATTGACATACTAT+AGG | - | chr5.1:4648846-4648865 | None:intergenic | 25.0% |
| ! | GTTAGTGTTAATAATCAGAT+TGG | + | chr5.1:4646233-4646252 | MS.gene20349:intron | 25.0% |
| ! | TAATGTCAGTCATATTAATG+TGG | + | chr5.1:4644901-4644920 | MS.gene20349:intron | 25.0% |
| ! | TATGGAAATACTGATATTGA+AGG | + | chr5.1:4646356-4646375 | MS.gene20349:CDS | 25.0% |
| ! | TGTCTGACTAAAAAATGATA+TGG | + | chr5.1:4647758-4647777 | MS.gene20349:intron | 25.0% |
| ! | TGTTAATAATCAGATTGGAT+TGG | + | chr5.1:4646238-4646257 | MS.gene20349:intron | 25.0% |
| ! | TTCACTCTCTGATATATTAT+AGG | + | chr5.1:4646205-4646224 | MS.gene20349:intron | 25.0% |
| ! | TTTGCTTTCAAAAGAAATAG+GGG | - | chr5.1:4646713-4646732 | None:intergenic | 25.0% |
| ! | TTTGTTCAATTGTGTCAATT+GGG | + | chr5.1:4646418-4646437 | MS.gene20349:CDS | 25.0% |
| !! | AAACAATCTAAATCCTTTTG+AGG | - | chr5.1:4648812-4648831 | None:intergenic | 25.0% |
| !! | ATTTACGCCTTAAAATTTTC+AGG | + | chr5.1:4648396-4648415 | MS.gene20349:intron | 25.0% |
| !! | TTACCATCCTGAAAATTTTA+AGG | - | chr5.1:4648406-4648425 | None:intergenic | 25.0% |
| !!! | AAAAATTTTGAAGCCTCAAA+AGG | + | chr5.1:4648796-4648815 | MS.gene20349:intron | 25.0% |
| !!! | AGGTTTCTTTCTTGTTTTTT+TGG | + | chr5.1:4645175-4645194 | MS.gene20349:intron | 25.0% |
| !!! | TGAAAAGTATTTTAACTCCT+GGG | + | chr5.1:4645579-4645598 | MS.gene20349:intron | 25.0% |
| !!! | TTCTTTTGAAAGCAAATTGA+GGG | + | chr5.1:4646717-4646736 | MS.gene20349:CDS | 25.0% |
| !!! | TTTCTTTTGAAAGCAAATTG+AGG | + | chr5.1:4646716-4646735 | MS.gene20349:CDS | 25.0% |
| !!! | TTTTGGCTGTTTATTATGTT+TGG | + | chr5.1:4645192-4645211 | MS.gene20349:intron | 25.0% |
| AAAGCCAAATTAAAGTTGCA+AGG | - | chr5.1:4646915-4646934 | None:intergenic | 30.0% | |
| AAATGATGAAAAGAAGGAAG+CGG | - | chr5.1:4644708-4644727 | None:intergenic | 30.0% | |
| AACAACAATGTTATCCTTCA+TGG | - | chr5.1:4646944-4646963 | None:intergenic | 30.0% | |
| AATATTAATTAACTAGGGGG+TGG | + | chr5.1:4647175-4647194 | MS.gene20349:intron | 30.0% | |
| ACAAGTGACAACAATGAAAA+TGG | - | chr5.1:4646816-4646835 | None:intergenic | 30.0% | |
| AGGGTGATATTATTCTCATA+CGG | + | chr5.1:4648427-4648446 | MS.gene20349:CDS | 30.0% | |
| ATATTATTCTCATACGGAAG+TGG | + | chr5.1:4648433-4648452 | MS.gene20349:CDS | 30.0% | |
| ATGACGTAGAAATAAAGAAC+AGG | - | chr5.1:4646971-4646990 | None:intergenic | 30.0% | |
| ATTGACACAATTGAACAAAG+CGG | - | chr5.1:4646417-4646436 | None:intergenic | 30.0% | |
| CAAATTTGGAAAGAGGTTTA+AGG | - | chr5.1:4647501-4647520 | None:intergenic | 30.0% | |
| CAATTTAGTACCTATTTGCA+TGG | + | chr5.1:4645990-4646009 | MS.gene20349:intron | 30.0% | |
| CATATCTGACTAGATGTTTA+TGG | - | chr5.1:4648579-4648598 | None:intergenic | 30.0% | |
| CATCACAAGAGAAAAACAAT+TGG | - | chr5.1:4646882-4646901 | None:intergenic | 30.0% | |
| CTCTGATATATTATAGGATG+TGG | + | chr5.1:4646211-4646230 | MS.gene20349:intron | 30.0% | |
| CTTTGTTCAATTGTGTCAAT+TGG | + | chr5.1:4646417-4646436 | MS.gene20349:CDS | 30.0% | |
| GAACTAAAAAATTCATGTCC+TGG | + | chr5.1:4646562-4646581 | MS.gene20349:intron | 30.0% | |
| GCAATGTTTGACAAACTAAA+TGG | - | chr5.1:4648505-4648524 | None:intergenic | 30.0% | |
| GCTATATATGTCATAGATAG+TGG | - | chr5.1:4648341-4648360 | None:intergenic | 30.0% | |
| GTTAGTACAAATTTGGAAAG+AGG | - | chr5.1:4647508-4647527 | None:intergenic | 30.0% | |
| TAATTGCAAGGAAAACATTG+TGG | - | chr5.1:4648467-4648486 | None:intergenic | 30.0% | |
| TATTACTGAATATGGTCTAG+AGG | - | chr5.1:4646527-4646546 | None:intergenic | 30.0% | |
| TCATCGGATAAAGTTGTAAA+AGG | - | chr5.1:4648019-4648038 | None:intergenic | 30.0% | |
| TCATTCAGGAACATGTAAAT+TGG | + | chr5.1:4645451-4645470 | MS.gene20349:intron | 30.0% | |
| TCTAGAGGCAACATATAATT+AGG | - | chr5.1:4646512-4646531 | None:intergenic | 30.0% | |
| TCTATGACTATCACAATGTT+GGG | + | chr5.1:4646587-4646606 | MS.gene20349:intron | 30.0% | |
| TGGAGATTTCTTTGTACATT+AGG | + | chr5.1:4647385-4647404 | MS.gene20349:intron | 30.0% | |
| TTATTAGAAAACAGGCAACA+TGG | - | chr5.1:4648374-4648393 | None:intergenic | 30.0% | |
| TTCCAATTCTTAAATGAGGT+CGG | + | chr5.1:4647327-4647346 | MS.gene20349:intron | 30.0% | |
| TTCTATGACTATCACAATGT+TGG | + | chr5.1:4646586-4646605 | MS.gene20349:intron | 30.0% | |
| TTGGTAAATACAACTCATGA+TGG | + | chr5.1:4645478-4645497 | MS.gene20349:intron | 30.0% | |
| ! | AACCATTTAAAACCTTGTCA+AGG | + | chr5.1:4645506-4645525 | MS.gene20349:intron | 30.0% |
| ! | CTTGTCAGAACATTTTACTT+TGG | + | chr5.1:4646831-4646850 | MS.gene20349:intron | 30.0% |
| ! | CTTTTCATTGTCTAACCATT+TGG | + | chr5.1:4645921-4645940 | MS.gene20349:intron | 30.0% |
| ! | GAACATGTAAATTGGTGATT+TGG | + | chr5.1:4645459-4645478 | MS.gene20349:intron | 30.0% |
| ! | TGAGGCTTCAAAATTTTTGT+AGG | - | chr5.1:4648794-4648813 | None:intergenic | 30.0% |
| ! | TGATTATGATTGTAGCTCTA+AGG | + | chr5.1:4647967-4647986 | MS.gene20349:intron | 30.0% |
| ! | TTAAAAAGTTTTCCAGAGGA+TGG | - | chr5.1:4647913-4647932 | None:intergenic | 30.0% |
| ! | TTTAGTTTCACGTAATTGCA+AGG | - | chr5.1:4648479-4648498 | None:intergenic | 30.0% |
| !! | AAAATTTTCAGGATGGTAAG+AGG | + | chr5.1:4648407-4648426 | MS.gene20349:intron | 30.0% |
| !! | AAATGGATTGAAAAGCTTAC+CGG | - | chr5.1:4646799-4646818 | None:intergenic | 30.0% |
| !! | AAATTTTCAGGATGGTAAGA+GGG | + | chr5.1:4648408-4648427 | MS.gene20349:intron | 30.0% |
| !! | GATTTGATTTGTCATCATTC+AGG | + | chr5.1:4645437-4645456 | MS.gene20349:intron | 30.0% |
| !! | TCTTTTGAAAGCAAATTGAG+GGG | + | chr5.1:4646718-4646737 | MS.gene20349:CDS | 30.0% |
| !!! | AGCTATTTTTGTTGTGAAGA+AGG | - | chr5.1:4648300-4648319 | None:intergenic | 30.0% |
| !!! | GCTATTTTTGTTGTGAAGAA+GGG | - | chr5.1:4648299-4648318 | None:intergenic | 30.0% |
| !!! | GTGAAAAGTATTTTAACTCC+TGG | + | chr5.1:4645578-4645597 | MS.gene20349:intron | 30.0% |
| AAACGAACAGAGATACAGAT+TGG | + | chr5.1:4648730-4648749 | MS.gene20349:intron | 35.0% | |
| AAAGTTGAAGTCAAGACATG+AGG | + | chr5.1:4648546-4648565 | MS.gene20349:CDS | 35.0% | |
| AAGCTAATGGAACATAGGTA+TGG | + | chr5.1:4648996-4649015 | MS.gene20349:CDS | 35.0% | |
| AATGTGTCCTTTGGTGAAAA+TGG | + | chr5.1:4647365-4647384 | MS.gene20349:intron | 35.0% | |
| ACATTAAACACACATACAGC+AGG | - | chr5.1:4645672-4645691 | None:intergenic | 35.0% | |
| ACTTTGATACCAAAGCAAGT+TGG | + | chr5.1:4648235-4648254 | MS.gene20349:CDS | 35.0% | |
| AGTGTTTCAATGAACTTCTG+TGG | - | chr5.1:4648975-4648994 | None:intergenic | 35.0% | |
| ATGGATAAATGATGAGAACC+TGG | - | chr5.1:4647894-4647913 | None:intergenic | 35.0% | |
| ATTATTATTAGCGTCGTGTC+TGG | - | chr5.1:4645266-4645285 | None:intergenic | 35.0% | |
| ATTCCACTCTCCTTATAACA+AGG | + | chr5.1:4647651-4647670 | MS.gene20349:CDS | 35.0% | |
| ATTCTTGATGCAGATCTTTG+AGG | + | chr5.1:4645895-4645914 | MS.gene20349:CDS | 35.0% | |
| CAAGGATTATGTAACAAGCA+AGG | + | chr5.1:4649022-4649041 | MS.gene20349:CDS | 35.0% | |
| CATTGAAACACTGAAGCTAA+TGG | + | chr5.1:4648983-4649002 | MS.gene20349:CDS | 35.0% | |
| CGAGTTCCAATTCTTAAATG+AGG | + | chr5.1:4647323-4647342 | MS.gene20349:intron | 35.0% | |
| CTATGACTATCACAATGTTG+GGG | + | chr5.1:4646588-4646607 | MS.gene20349:intron | 35.0% | |
| CTTTACATGAAAACAGTCAC+TGG | - | chr5.1:4646171-4646190 | None:intergenic | 35.0% | |
| GAATGATTAGGAAATAACGG+TGG | - | chr5.1:4644792-4644811 | None:intergenic | 35.0% | |
| GACTTAGCTCAAATCAACAA+TGG | + | chr5.1:4647455-4647474 | MS.gene20349:intron | 35.0% | |
| GCATCCTTGCAACTTTAATT+TGG | + | chr5.1:4646908-4646927 | MS.gene20349:intron | 35.0% | |
| GGGAAATATACAATTGGACT+TGG | + | chr5.1:4645103-4645122 | MS.gene20349:CDS | 35.0% | |
| GGTTTAATCACCATGCAAAT+AGG | - | chr5.1:4646003-4646022 | None:intergenic | 35.0% | |
| TAAGCATGTCACATGAGATT+TGG | + | chr5.1:4645372-4645391 | MS.gene20349:intron | 35.0% | |
| TCACAACAAAAATAGCTCAC+TGG | + | chr5.1:4648303-4648322 | MS.gene20349:CDS | 35.0% | |
| TGCATAGAATCTACGATACA+TGG | - | chr5.1:4649096-4649115 | None:intergenic | 35.0% | |
| TGCTTTGGTATCAAAGTAGA+TGG | - | chr5.1:4648232-4648251 | None:intergenic | 35.0% | |
| TGGATAAATGATGAGAACCT+GGG | - | chr5.1:4647893-4647912 | None:intergenic | 35.0% | |
| TTCACAAACATGTTACCTCA+TGG | + | chr5.1:4647067-4647086 | MS.gene20349:CDS | 35.0% | |
| TTCCGACCTCATTTAAGAAT+TGG | - | chr5.1:4647332-4647351 | None:intergenic | 35.0% | |
| TTGAAGATGTCATCTCAATG+AGG | + | chr5.1:4645155-4645174 | MS.gene20349:CDS | 35.0% | |
| TTGTGATAGTCATAGAATCC+AGG | - | chr5.1:4646583-4646602 | None:intergenic | 35.0% | |
| ! | AAAAGGTCCAAGCTTTTCTT+TGG | - | chr5.1:4648002-4648021 | None:intergenic | 35.0% |
| ! | ATTTTCACCAAAGGACACAT+TGG | - | chr5.1:4647366-4647385 | None:intergenic | 35.0% |
| ! | CTTGCTTGTTACATAATCCT+TGG | - | chr5.1:4649024-4649043 | None:intergenic | 35.0% |
| ! | GAAATCTCCATTTTCACCAA+AGG | - | chr5.1:4647375-4647394 | None:intergenic | 35.0% |
| ! | GATTCAACTAATGCTTGCTA+TGG | + | chr5.1:4646383-4646402 | MS.gene20349:CDS | 35.0% |
| ! | GCAAAAAAGTTTTGCTCGTT+TGG | + | chr5.1:4647844-4647863 | MS.gene20349:CDS | 35.0% |
| ! | GTCTGAACTACCTTGTTATA+AGG | - | chr5.1:4647664-4647683 | None:intergenic | 35.0% |
| ! | GTCTGGAACAAACAGAAATA+TGG | + | chr5.1:4646338-4646357 | MS.gene20349:intron | 35.0% |
| ! | TACATGTTACCAACTTGCTT+TGG | - | chr5.1:4648247-4648266 | None:intergenic | 35.0% |
| ! | TTTGTAGGAGCACAACTAAA+AGG | - | chr5.1:4648779-4648798 | None:intergenic | 35.0% |
| !! | AATGGATTGAAAAGCTTACC+GGG | - | chr5.1:4646798-4646817 | None:intergenic | 35.0% |
| !! | ACAGGGAGCATTATTATCAT+TGG | - | chr5.1:4647718-4647737 | None:intergenic | 35.0% |
| !! | ACGCCTTAAAATTTTCAGGA+TGG | + | chr5.1:4648400-4648419 | MS.gene20349:intron | 35.0% |
| !! | CGTGATTAGCTTAATGAAGA+TGG | - | chr5.1:4644749-4644768 | None:intergenic | 35.0% |
| !!! | CACCTTGACAAGGTTTTAAA+TGG | - | chr5.1:4645511-4645530 | None:intergenic | 35.0% |
| AAAAAATTTCACCAAGGGCC+AGG | - | chr5.1:4647284-4647303 | None:intergenic | 40.0% | |
| AAAGCCTCTATACGATGAGA+AGG | + | chr5.1:4648201-4648220 | MS.gene20349:CDS | 40.0% | |
| AATTCATGGGATGGACGTTA+TGG | + | chr5.1:4646449-4646468 | MS.gene20349:CDS | 40.0% | |
| AATTTGACTCCTGCAGTCAA+CGG | + | chr5.1:4649134-4649153 | MS.gene20349:CDS | 40.0% | |
| AGGAAAACATTGTGGCAGTT+AGG | - | chr5.1:4648459-4648478 | None:intergenic | 40.0% | |
| ATAGAGGCTTTGCAACTTGT+TGG | - | chr5.1:4648192-4648211 | None:intergenic | 40.0% | |
| CAAATTGAGGGGAAGTCATA+TGG | + | chr5.1:4646729-4646748 | MS.gene20349:CDS | 40.0% | |
| CACTGAAGCTAATGGAACAT+AGG | + | chr5.1:4648991-4649010 | MS.gene20349:CDS | 40.0% | |
| CCATCAATGCTTACTTTCTC+AGG | + | chr5.1:4646618-4646637 | MS.gene20349:intron | 40.0% | |
| CCTACAGCACAAAAATCATG+TGG | - | chr5.1:4647031-4647050 | None:intergenic | 40.0% | |
| CTCATCATTTATCCATCCTC+TGG | + | chr5.1:4647898-4647917 | MS.gene20349:intron | 40.0% | |
| CTGCATCAAGAATGACTTGA+TGG | - | chr5.1:4645888-4645907 | None:intergenic | 40.0% | |
| GAGATCGATCCTAAACAGAT+TGG | + | chr5.1:4645818-4645837 | MS.gene20349:CDS | 40.0% | |
| GAGGTTACCAAAGAAAAGCT+TGG | + | chr5.1:4647992-4648011 | MS.gene20349:CDS | 40.0% | |
| GCGAGAATCACATATCCAAA+TGG | - | chr5.1:4645939-4645958 | None:intergenic | 40.0% | |
| GCTGCTATTGCTATGCTAAT+TGG | + | chr5.1:4646679-4646698 | MS.gene20349:CDS | 40.0% | |
| GTATCCTGAAATGCTACATG+TGG | - | chr5.1:4646994-4647013 | None:intergenic | 40.0% | |
| GTGCTTCGTAGATGATAACT+CGG | - | chr5.1:4645232-4645251 | None:intergenic | 40.0% | |
| GTTCAATTGTGTCAATTGGG+TGG | + | chr5.1:4646421-4646440 | MS.gene20349:CDS | 40.0% | |
| GTTTCAATGAACTTCTGTGG+AGG | - | chr5.1:4648972-4648991 | None:intergenic | 40.0% | |
| TACTACTAAGGTTACGGCAT+CGG | - | chr5.1:4646144-4646163 | None:intergenic | 40.0% | |
| TCATCCACATGTAGCATTTC+AGG | + | chr5.1:4646987-4647006 | MS.gene20349:intron | 40.0% | |
| TCATGTGGATTTAGTGCACT+TGG | - | chr5.1:4647016-4647035 | None:intergenic | 40.0% | |
| TCTCATGTGACATGCTTATC+CGG | - | chr5.1:4645370-4645389 | None:intergenic | 40.0% | |
| TCTTAAATGAGGTCGGAAAC+CGG | + | chr5.1:4647334-4647353 | MS.gene20349:intron | 40.0% | |
| TGCAGATATGAGAAACACGA+GGG | + | chr5.1:4647592-4647611 | MS.gene20349:intron | 40.0% | |
| TGTACCTTCTCATCGTATAG+AGG | - | chr5.1:4648208-4648227 | None:intergenic | 40.0% | |
| TTCAGCAACATCCATCACTT+GGG | - | chr5.1:4648527-4648546 | None:intergenic | 40.0% | |
| TTGCAGATATGAGAAACACG+AGG | + | chr5.1:4647591-4647610 | MS.gene20349:intron | 40.0% | |
| TTTCAGCAACATCCATCACT+TGG | - | chr5.1:4648528-4648547 | None:intergenic | 40.0% | |
| ! | CCACATGATTTTTGTGCTGT+AGG | + | chr5.1:4647028-4647047 | MS.gene20349:intron | 40.0% |
| ! | CTACCTTGTTATAAGGAGAG+TGG | - | chr5.1:4647657-4647676 | None:intergenic | 40.0% |
| ! | TAGAGGCTTTGCAACTTGTT+GGG | - | chr5.1:4648191-4648210 | None:intergenic | 40.0% |
| !! | ACGATACATGGTATCGACTT+CGG | - | chr5.1:4649084-4649103 | None:intergenic | 40.0% |
| !! | CACATACCTTTTCAAGATCC+CGG | - | chr5.1:4648057-4648076 | None:intergenic | 40.0% |
| !! | CCTGAGAAAGTAAGCATTGA+TGG | - | chr5.1:4646621-4646640 | None:intergenic | 40.0% |
| !! | GTTTTTGATGCAGGAAGCAT+TGG | + | chr5.1:4645057-4645076 | MS.gene20349:intron | 40.0% |
| !! | TCAAAAGAAATAGGGGCATC+AGG | - | chr5.1:4646706-4646725 | None:intergenic | 40.0% |
| !! | TCAACTAATGCTTGCTATGG+AGG | + | chr5.1:4646386-4646405 | MS.gene20349:CDS | 40.0% |
| !! | TGATTGTAGCTCTAAGGATG+AGG | + | chr5.1:4647973-4647992 | MS.gene20349:intron | 40.0% |
| !! | TTGGCTTTGATATGCCATGA+AGG | + | chr5.1:4646927-4646946 | MS.gene20349:intron | 40.0% |
| AAATGCTGCATAGATGGACG+CGG | - | chr5.1:4648272-4648291 | None:intergenic | 45.0% | |
| ACTACTAAGGTTACGGCATC+GGG | - | chr5.1:4646143-4646162 | None:intergenic | 45.0% | |
| AGCAAGTATCAAGAGCCATG+AGG | - | chr5.1:4647085-4647104 | None:intergenic | 45.0% | |
| ATTCCAACGTTCTTTGCTGC+TGG | - | chr5.1:4644631-4644650 | None:intergenic | 45.0% | |
| ATTGGGTGGAGAGCAATTCA+TGG | + | chr5.1:4646435-4646454 | MS.gene20349:CDS | 45.0% | |
| CTTTCTCAGGTCTATGCTGA+AGG | + | chr5.1:4646631-4646650 | MS.gene20349:intron | 45.0% | |
| GGATGCAAATGCTGCATAGA+TGG | - | chr5.1:4648278-4648297 | None:intergenic | 45.0% | |
| GGTCGCTACTACTAAGGTTA+CGG | - | chr5.1:4646150-4646169 | None:intergenic | 45.0% | |
| GTCAAACATTGCCCAAGTGA+TGG | + | chr5.1:4648513-4648532 | MS.gene20349:CDS | 45.0% | |
| GTCAACGGTTTGTCTGTCAA+TGG | + | chr5.1:4649149-4649168 | MS.gene20349:CDS | 45.0% | |
| GTGATTCTCGCTGTCAATGT+AGG | + | chr5.1:4645948-4645967 | MS.gene20349:intron | 45.0% | |
| GTTACCTGTTGAACGCAGTT+AGG | - | chr5.1:4644679-4644698 | None:intergenic | 45.0% | |
| TCCAGACGACCAATCTGTTT+AGG | - | chr5.1:4645830-4645849 | None:intergenic | 45.0% | |
| TGACCTTGCTAGTGAATACC+CGG | + | chr5.1:4646777-4646796 | MS.gene20349:CDS | 45.0% | |
| TTACCGGGTATTCACTAGCA+AGG | - | chr5.1:4646783-4646802 | None:intergenic | 45.0% | |
| TTGCATCTGCAGTTTGACAG+TGG | + | chr5.1:4645772-4645791 | MS.gene20349:intron | 45.0% | |
| TTGGGTGGAGAGCAATTCAT+GGG | + | chr5.1:4646436-4646455 | MS.gene20349:CDS | 45.0% | |
| TTTGTGCTGTAGGTTGTCGA+CGG | + | chr5.1:4647038-4647057 | MS.gene20349:intron | 45.0% | |
| ! | CTCATGATGGTGCGAGTAAA+GGG | + | chr5.1:4645083-4645102 | MS.gene20349:CDS | 45.0% |
| ! | TCCTAAACAGATTGGTCGTC+TGG | + | chr5.1:4645826-4645845 | MS.gene20349:CDS | 45.0% |
| !! | TTTGATGCAGGAAGCATTGG+AGG | + | chr5.1:4645060-4645079 | MS.gene20349:intron | 45.0% |
| !!! | TTTTTTTTTAATTAGAAAAA+AGG | + | chr5.1:4644943-4644962 | MS.gene20349:intron | 5.0% |
| ACCTGTTGAACGCAGTTAGG+AGG | - | chr5.1:4644676-4644695 | None:intergenic | 50.0% | |
| AGAATGTGCCTGGAGCCAAA+AGG | - | chr5.1:4649055-4649074 | None:intergenic | 50.0% | |
| ATGACGAGAGCTACCAAAGC+CGG | + | chr5.1:4648035-4648054 | MS.gene20349:CDS | 50.0% | |
| CACTGAGACGTGTCAAACAC+CGG | + | chr5.1:4645348-4645367 | MS.gene20349:intron | 50.0% | |
| CCAAAGCCGGGATCTTGAAA+AGG | + | chr5.1:4648048-4648067 | MS.gene20349:CDS | 50.0% | |
| CCTGTTGAACGCAGTTAGGA+GGG | - | chr5.1:4644675-4644694 | None:intergenic | 50.0% | |
| GGGTATTCACTAGCAAGGTC+AGG | - | chr5.1:4646778-4646797 | None:intergenic | 50.0% | |
| GTCACTGGTCGCTACTACTA+AGG | - | chr5.1:4646156-4646175 | None:intergenic | 50.0% | |
| GTGGAGAGCAATTCATGGGA+TGG | + | chr5.1:4646440-4646459 | MS.gene20349:CDS | 50.0% | |
| TCACCAAAGGACACATTGGC+AGG | - | chr5.1:4647362-4647381 | None:intergenic | 50.0% | |
| TCGGTGAGAAAGAATGTGCC+TGG | - | chr5.1:4649065-4649084 | None:intergenic | 50.0% | |
| TGGTCTTCAGCGACTTCTTG+AGG | + | chr5.1:4647864-4647883 | MS.gene20349:CDS | 50.0% | |
| ! | AAGCAAGGACAGCAGCCTTT+TGG | + | chr5.1:4649037-4649056 | MS.gene20349:CDS | 50.0% |
| ! | ACAGACAAACCGTTGACTGC+AGG | - | chr5.1:4649146-4649165 | None:intergenic | 50.0% |
| ! | CAGATTGGTCGTCTGGAAGT+CGG | + | chr5.1:4645833-4645852 | MS.gene20349:CDS | 50.0% |
| ! | GATGCAAGTTGAGTCTGACC+TGG | + | chr5.1:4647258-4647277 | MS.gene20349:intron | 50.0% |
| ! | GCTCATGATGGTGCGAGTAA+AGG | + | chr5.1:4645082-4645101 | MS.gene20349:CDS | 50.0% |
| ! | GCTTTGGTAGCTCTCGTCAT+CGG | - | chr5.1:4648035-4648054 | None:intergenic | 50.0% |
| ! | GGAACATAGGTATGGTGCCA+AGG | + | chr5.1:4649004-4649023 | MS.gene20349:CDS | 50.0% |
| !! | CCTTTTCAAGATCCCGGCTT+TGG | - | chr5.1:4648051-4648070 | None:intergenic | 50.0% |
| !! | GAAGCATTGGAGGCTCATGA+TGG | + | chr5.1:4645070-4645089 | MS.gene20349:CDS | 50.0% |
| AAGGACACATTGGCAGGCAC+CGG | - | chr5.1:4647356-4647375 | None:intergenic | 55.0% | |
| AAGTTGAGTCTGACCTGGCC+TGG | + | chr5.1:4647263-4647282 | MS.gene20349:intron | 55.0% | |
| AGCAATAGCAGCAGCTCCTC+CGG | - | chr5.1:4646671-4646690 | None:intergenic | 55.0% | |
| CACATGTGCCAGTGTCGTGT+TGG | + | chr5.1:4645318-4645337 | MS.gene20349:intron | 55.0% | |
| CCCTCCTAACTGCGTTCAAC+AGG | + | chr5.1:4644672-4644691 | MS.gene20349:CDS | 55.0% | |
| GCACCAGCAGCAAAGAACGT+TGG | + | chr5.1:4644625-4644644 | MS.gene20349:CDS | 55.0% | |
| GCGACTTCTTGAGGAATCCC+AGG | + | chr5.1:4647873-4647892 | MS.gene20349:CDS | 55.0% | |
| GTGCCTGCCAATGTGTCCTT+TGG | + | chr5.1:4647356-4647375 | MS.gene20349:intron | 55.0% | |
| TGACGAGAGCTACCAAAGCC+GGG | + | chr5.1:4648036-4648055 | MS.gene20349:CDS | 55.0% | |
| ! | TGCCAGTGTCGTGTTGGTGT+CGG | + | chr5.1:4645324-4645343 | MS.gene20349:intron | 55.0% |
| ATAGCAGCAGCTCCTCCGGT+AGG | - | chr5.1:4646667-4646686 | None:intergenic | 60.0% | |
| ATTTCACCAAGGGCCAGGCC+AGG | - | chr5.1:4647279-4647298 | None:intergenic | 60.0% | |
| GAAGGTCCTGCTCGACCTAC+CGG | + | chr5.1:4646649-4646668 | MS.gene20349:CDS | 60.0% | |
| ! | GCCAGTGTCGTGTTGGTGTC+GGG | + | chr5.1:4645325-4645344 | MS.gene20349:intron | 60.0% |
| !!! | GACAGCAGCCTTTTGGCTCC+AGG | + | chr5.1:4649044-4649063 | MS.gene20349:CDS | 60.0% |
| GCCCGACACCAACACGACAC+TGG | - | chr5.1:4645329-4645348 | None:intergenic | 65.0% | |
| GCTCCTCCGGTAGGTCGAGC+AGG | - | chr5.1:4646658-4646677 | None:intergenic | 70.0% | |
| GGTCCTGCTCGACCTACCGG+AGG | + | chr5.1:4646652-4646671 | MS.gene20349:CDS | 70.0% | |
| GTCTGACCTGGCCTGGCCCT+TGG | + | chr5.1:4647270-4647289 | MS.gene20349:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 4644622 | 4649178 | 4644622 | ID=MS.gene20349 |
| chr5.1 | mRNA | 4644622 | 4649178 | 4644622 | ID=MS.gene20349.t1;Parent=MS.gene20349 |
| chr5.1 | exon | 4644622 | 4644693 | 4644622 | ID=MS.gene20349.t1.exon1;Parent=MS.gene20349.t1 |
| chr5.1 | CDS | 4644622 | 4644693 | 4644622 | ID=cds.MS.gene20349.t1;Parent=MS.gene20349.t1 |
| chr5.1 | exon | 4645070 | 4645176 | 4645070 | ID=MS.gene20349.t1.exon2;Parent=MS.gene20349.t1 |
| chr5.1 | CDS | 4645070 | 4645176 | 4645070 | ID=cds.MS.gene20349.t1;Parent=MS.gene20349.t1 |
| chr5.1 | exon | 4645784 | 4645916 | 4645784 | ID=MS.gene20349.t1.exon3;Parent=MS.gene20349.t1 |
| chr5.1 | CDS | 4645784 | 4645916 | 4645784 | ID=cds.MS.gene20349.t1;Parent=MS.gene20349.t1 |
| chr5.1 | exon | 4646353 | 4646496 | 4646353 | ID=MS.gene20349.t1.exon4;Parent=MS.gene20349.t1 |
| chr5.1 | CDS | 4646353 | 4646496 | 4646353 | ID=cds.MS.gene20349.t1;Parent=MS.gene20349.t1 |
| chr5.1 | exon | 4646640 | 4646798 | 4646640 | ID=MS.gene20349.t1.exon5;Parent=MS.gene20349.t1 |
| chr5.1 | CDS | 4646640 | 4646798 | 4646640 | ID=cds.MS.gene20349.t1;Parent=MS.gene20349.t1 |
| chr5.1 | exon | 4647050 | 4647123 | 4647050 | ID=MS.gene20349.t1.exon6;Parent=MS.gene20349.t1 |
| chr5.1 | CDS | 4647050 | 4647123 | 4647050 | ID=cds.MS.gene20349.t1;Parent=MS.gene20349.t1 |
| chr5.1 | exon | 4647597 | 4647672 | 4647597 | ID=MS.gene20349.t1.exon7;Parent=MS.gene20349.t1 |
| chr5.1 | CDS | 4647597 | 4647672 | 4647597 | ID=cds.MS.gene20349.t1;Parent=MS.gene20349.t1 |
| chr5.1 | exon | 4647839 | 4647894 | 4647839 | ID=MS.gene20349.t1.exon8;Parent=MS.gene20349.t1 |
| chr5.1 | CDS | 4647839 | 4647894 | 4647839 | ID=cds.MS.gene20349.t1;Parent=MS.gene20349.t1 |
| chr5.1 | exon | 4647982 | 4648069 | 4647982 | ID=MS.gene20349.t1.exon9;Parent=MS.gene20349.t1 |
| chr5.1 | CDS | 4647982 | 4648069 | 4647982 | ID=cds.MS.gene20349.t1;Parent=MS.gene20349.t1 |
| chr5.1 | exon | 4648184 | 4648324 | 4648184 | ID=MS.gene20349.t1.exon10;Parent=MS.gene20349.t1 |
| chr5.1 | CDS | 4648184 | 4648324 | 4648184 | ID=cds.MS.gene20349.t1;Parent=MS.gene20349.t1 |
| chr5.1 | exon | 4648418 | 4648567 | 4648418 | ID=MS.gene20349.t1.exon11;Parent=MS.gene20349.t1 |
| chr5.1 | CDS | 4648418 | 4648567 | 4648418 | ID=cds.MS.gene20349.t1;Parent=MS.gene20349.t1 |
| chr5.1 | exon | 4648966 | 4649178 | 4648966 | ID=MS.gene20349.t1.exon12;Parent=MS.gene20349.t1 |
| chr5.1 | CDS | 4648966 | 4649178 | 4648966 | ID=cds.MS.gene20349.t1;Parent=MS.gene20349.t1 |
| Gene Sequence |
| Protein sequence |
