Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20368.t1 | KEH27445.1 | 94.6 | 497 | 25 | 2 | 1 | 495 | 1 | 497 | 1.40E-264 | 921.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20368.t1 | F4I2H7 | 33.3 | 348 | 173 | 13 | 136 | 430 | 169 | 510 | 4.1e-31 | 137.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20368.t1 | A0A072UNM9 | 94.6 | 497 | 25 | 2 | 1 | 495 | 1 | 497 | 9.9e-265 | 921.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene20368 | 0.800145 | 1.65E-48 | -1.69E-46 |
| MS.gene051955 | MS.gene20368 | 0.8197 | 1.01E-52 | -1.69E-46 |
| MS.gene055578 | MS.gene20368 | 0.814885 | 1.23E-51 | -1.69E-46 |
| MS.gene056041 | MS.gene20368 | 0.826813 | 2.21E-54 | -1.69E-46 |
| MS.gene056526 | MS.gene20368 | 0.81301 | 3.18E-51 | -1.69E-46 |
| MS.gene060473 | MS.gene20368 | 0.854222 | 1.42E-61 | -1.69E-46 |
| MS.gene060565 | MS.gene20368 | 0.854033 | 1.61E-61 | -1.69E-46 |
| MS.gene061099 | MS.gene20368 | 0.807102 | 5.96E-50 | -1.69E-46 |
| MS.gene061260 | MS.gene20368 | 0.807672 | 4.51E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20368.t1 | MTR_5g011390 | 94.567 | 497 | 25 | 2 | 1 | 495 | 1 | 497 | 0.0 | 966 |
| MS.gene20368.t1 | MTR_4g101890 | 50.625 | 480 | 204 | 10 | 21 | 495 | 19 | 470 | 5.23e-143 | 419 |
| MS.gene20368.t1 | MTR_4g101890 | 49.057 | 477 | 199 | 11 | 21 | 495 | 19 | 453 | 3.74e-136 | 401 |
| MS.gene20368.t1 | MTR_4g101890 | 51.300 | 423 | 180 | 8 | 21 | 441 | 19 | 417 | 1.30e-129 | 383 |
| MS.gene20368.t1 | MTR_4g101890 | 57.188 | 313 | 122 | 5 | 186 | 495 | 1 | 304 | 4.91e-110 | 329 |
| MS.gene20368.t1 | MTR_8g067260 | 97.059 | 68 | 2 | 0 | 1 | 68 | 1 | 68 | 1.71e-41 | 143 |
| MS.gene20368.t1 | MTR_2g038240 | 73.864 | 88 | 2 | 1 | 1 | 67 | 1 | 88 | 6.46e-37 | 132 |
| MS.gene20368.t1 | MTR_2g088210 | 98.305 | 59 | 1 | 0 | 1 | 59 | 1 | 59 | 2.14e-36 | 130 |
| MS.gene20368.t1 | MTR_4g078565 | 29.804 | 510 | 247 | 17 | 28 | 436 | 16 | 515 | 1.33e-35 | 141 |
| MS.gene20368.t1 | MTR_6g463310 | 35.461 | 282 | 141 | 9 | 21 | 293 | 16 | 265 | 4.66e-32 | 126 |
| MS.gene20368.t1 | MTR_4g078565 | 34.576 | 295 | 138 | 8 | 195 | 436 | 216 | 508 | 4.52e-31 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20368.t1 | AT4G22860 | 43.327 | 517 | 238 | 14 | 15 | 495 | 7 | 504 | 3.04e-112 | 342 |
| MS.gene20368.t1 | AT4G11990 | 42.769 | 484 | 234 | 13 | 15 | 477 | 15 | 476 | 1.24e-99 | 309 |
| MS.gene20368.t1 | AT4G22860 | 50.281 | 356 | 151 | 9 | 149 | 495 | 158 | 496 | 6.62e-94 | 294 |
| MS.gene20368.t1 | AT4G22860 | 42.286 | 350 | 165 | 8 | 15 | 336 | 7 | 347 | 4.38e-73 | 236 |
| MS.gene20368.t1 | AT1G03780 | 35.690 | 297 | 136 | 11 | 186 | 430 | 217 | 510 | 3.77e-35 | 140 |
| MS.gene20368.t1 | AT1G03780 | 35.690 | 297 | 136 | 11 | 186 | 430 | 217 | 510 | 4.43e-35 | 140 |
| MS.gene20368.t1 | AT5G07170 | 31.172 | 401 | 205 | 17 | 11 | 402 | 18 | 356 | 9.15e-35 | 134 |
| MS.gene20368.t1 | AT5G07170 | 34.234 | 333 | 156 | 15 | 11 | 334 | 18 | 296 | 6.32e-34 | 131 |
| MS.gene20368.t1 | AT1G03780 | 30.822 | 292 | 126 | 12 | 186 | 425 | 217 | 484 | 8.27e-22 | 99.4 |
| MS.gene20368.t1 | AT5G62240 | 30.408 | 319 | 175 | 9 | 23 | 336 | 15 | 291 | 8.47e-22 | 97.4 |
Find 112 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCAATTGTTCTGCTGTTAA+AGG | 0.182738 | 5.1:+4837197 | None:intergenic |
| TATTGGCCGTGCTTTGAATT+TGG | 0.191392 | 5.1:+4835808 | None:intergenic |
| ATTAGGATTCATACCTTCTT+AGG | 0.212980 | 5.1:+4836441 | None:intergenic |
| CAAGAGCTTACTTGAAATTC+AGG | 0.216104 | 5.1:+4835631 | None:intergenic |
| CTGATTACCTTCTTATTAAA+TGG | 0.255685 | 5.1:+4834918 | None:intergenic |
| ACCTAGTCCTTTGTGCTCTA+TGG | 0.273421 | 5.1:+4835963 | None:intergenic |
| TTCACTCGCATTCACGGAAT+TGG | 0.278574 | 5.1:+4837863 | None:intergenic |
| ATTGGCCGTGCTTTGAATTT+GGG | 0.284854 | 5.1:+4835809 | None:intergenic |
| TTGACTGGGCTCCAGATGTT+AGG | 0.287195 | 5.1:+4833909 | None:intergenic |
| AACACCAATATCTCCTTTAC+TGG | 0.322420 | 5.1:+4834279 | None:intergenic |
| CACTCTAGGAAGCGTAATCT+TGG | 0.333654 | 5.1:+4836003 | None:intergenic |
| CTTTCCAGTAAAGGAGATAT+TGG | 0.359519 | 5.1:-4834283 | MS.gene20368:CDS |
| CATGGGAAATTCCTTTCATC+TGG | 0.361861 | 5.1:-4833733 | MS.gene20368:CDS |
| GGTACAACAAGTGCATAAAA+AGG | 0.365818 | 5.1:-4836779 | MS.gene20368:CDS |
| GATTAGTGTAGCTAACTCTT+TGG | 0.366736 | 5.1:-4836755 | MS.gene20368:CDS |
| ACCTTTAACAGCAGAACAAT+TGG | 0.388644 | 5.1:-4837198 | MS.gene20368:CDS |
| GCGGTTTCGAACCAGCGTTC+AGG | 0.397286 | 5.1:+4838205 | None:intergenic |
| TCCTCATTTCAGAGTGTTCA+AGG | 0.409665 | 5.1:-4833861 | MS.gene20368:intron |
| CCCCTCAAATTGTTGGTTCA+AGG | 0.418407 | 5.1:-4837080 | MS.gene20368:intron |
| GTCAGTTGGCTAAGCAAAAT+CGG | 0.418493 | 5.1:-4837104 | MS.gene20368:CDS |
| CCAGTCAAATAGTGGTTCTA+AGG | 0.420256 | 5.1:-4833894 | MS.gene20368:CDS |
| TTCCTTTCATCTGGACCAAA+AGG | 0.420779 | 5.1:-4833724 | MS.gene20368:intron |
| ACCTTACTAAAGAGGTCAAT+TGG | 0.421892 | 5.1:+4834088 | None:intergenic |
| CCTTAGAACCACTATTTGAC+TGG | 0.423593 | 5.1:+4833894 | None:intergenic |
| CATCATTACCTCTTCATAAG+AGG | 0.434508 | 5.1:-4835669 | MS.gene20368:CDS |
| TACCAAGCGGCAGAAATTAG+AGG | 0.441976 | 5.1:-4836716 | MS.gene20368:CDS |
| CACCTTGAACCAACAATTTG+AGG | 0.450794 | 5.1:+4837078 | None:intergenic |
| TAATCCAATCCATCATGCTT+TGG | 0.455156 | 5.1:+4834963 | None:intergenic |
| ACCAATTGACCTCTTTAGTA+AGG | 0.458480 | 5.1:-4834089 | MS.gene20368:intron |
| TCGAACCAGCGTTCAGGTTG+TGG | 0.460088 | 5.1:+4838211 | None:intergenic |
| CTATGGAATGTTTCTAGCTC+GGG | 0.461630 | 5.1:+4835980 | None:intergenic |
| TGTCCACAAGGCACCTAAGA+AGG | 0.462403 | 5.1:-4836454 | MS.gene20368:intron |
| ACCCTCTAATTTCTGCCGCT+TGG | 0.464692 | 5.1:+4836714 | None:intergenic |
| TTCTTCGGTTTCAGCATTTG+CGG | 0.466832 | 5.1:-4838077 | MS.gene20368:intron |
| GTTTCTAGCTCGGGCACTCT+AGG | 0.467618 | 5.1:+4835989 | None:intergenic |
| TCCATGCAATGATTCTGATA+AGG | 0.467882 | 5.1:-4835298 | MS.gene20368:intron |
| AATCAGTTGTCCCTAACATC+TGG | 0.475710 | 5.1:-4833920 | MS.gene20368:intron |
| AGCTCGACCATTTAATAAGA+AGG | 0.477019 | 5.1:-4834925 | MS.gene20368:intron |
| AGGAAGCGTAATCTTGGGCT+TGG | 0.477041 | 5.1:+4836009 | None:intergenic |
| TCTGCACAGGCCATCTGTGA+TGG | 0.480912 | 5.1:-4834991 | MS.gene20368:intron |
| TGACTGGGCTCCAGATGTTA+GGG | 0.481922 | 5.1:+4833910 | None:intergenic |
| GAAATTCAGGCAACCGTGCA+GGG | 0.483025 | 5.1:+4835644 | None:intergenic |
| TGAAATTCAGGCAACCGTGC+AGG | 0.483442 | 5.1:+4835643 | None:intergenic |
| TCTATGGAATGTTTCTAGCT+CGG | 0.489717 | 5.1:+4835979 | None:intergenic |
| CTCTTATGAAGAGGTAATGA+TGG | 0.501693 | 5.1:+4835670 | None:intergenic |
| TGGTTTCCTGTTTAATGTTG+CGG | 0.504893 | 5.1:+4834254 | None:intergenic |
| GATGGATTGGATTATAGTCA+TGG | 0.504951 | 5.1:-4834954 | MS.gene20368:CDS |
| ATGAATTCACCTTACTAAAG+AGG | 0.505144 | 5.1:+4834080 | None:intergenic |
| ACTGAAATGGAAAACAATGT+TGG | 0.505866 | 5.1:-4838373 | None:intergenic |
| TCTGGAGCCCAGTCAAATAG+TGG | 0.506582 | 5.1:-4833902 | MS.gene20368:CDS |
| CTGCACAGGCCATCTGTGAT+GGG | 0.507509 | 5.1:-4834990 | MS.gene20368:intron |
| GTGCAGATACTTTCCAGTAA+AGG | 0.509041 | 5.1:-4834292 | MS.gene20368:intron |
| CACCACAGCAGATTTAGACT+TGG | 0.509558 | 5.1:+4837161 | None:intergenic |
| ACCTTGAACACTCTGAAATG+AGG | 0.513391 | 5.1:+4833860 | None:intergenic |
| ACCTTGAACCAACAATTTGA+GGG | 0.514030 | 5.1:+4837079 | None:intergenic |
| TGCTCCAAAGCATGATGGAT+TGG | 0.515441 | 5.1:-4834967 | MS.gene20368:CDS |
| ACTCTAGGAAGCGTAATCTT+GGG | 0.521083 | 5.1:+4836004 | None:intergenic |
| GAAGCAAGAAATCATGATGA+TGG | 0.523568 | 5.1:-4838344 | MS.gene20368:CDS |
| CATCAAAATGTTGTGCAACC+AGG | 0.534171 | 5.1:-4837813 | MS.gene20368:intron |
| GAAGGATTTAAAAGAAAACA+TGG | 0.535892 | 5.1:-4833751 | MS.gene20368:intron |
| ACCAACTATGCATACCTCCT+TGG | 0.540572 | 5.1:+4833501 | None:intergenic |
| GCAAATTCAGAGAGGGAGTG+AGG | 0.550875 | 5.1:-4833556 | MS.gene20368:CDS |
| CAAATTCAGAGAGGGAGTGA+GGG | 0.554572 | 5.1:-4833555 | MS.gene20368:CDS |
| CTGGTACAATATTGAGTCCA+AGG | 0.554844 | 5.1:-4833518 | MS.gene20368:CDS |
| GAGGGTTGCATCAACGAAGC+TGG | 0.554864 | 5.1:-4833537 | MS.gene20368:CDS |
| ATACCTTCTTAGGTGCCTTG+TGG | 0.557173 | 5.1:+4836451 | None:intergenic |
| CTTAGAACCACTATTTGACT+GGG | 0.562338 | 5.1:+4833895 | None:intergenic |
| GAGAAAAGCAAATTCAGAGA+GGG | 0.563610 | 5.1:-4833563 | MS.gene20368:CDS |
| ACAGGAAACCACTGTGCCAA+TGG | 0.568258 | 5.1:-4834242 | MS.gene20368:intron |
| TGGAAAACAATGTTGGAATG+TGG | 0.569916 | 5.1:-4838366 | MS.gene20368:CDS |
| TACTAAAGAGGTCAATTGGT+GGG | 0.571250 | 5.1:+4834092 | None:intergenic |
| TCCATAGAGCACAAAGGACT+AGG | 0.572111 | 5.1:-4835964 | MS.gene20368:intron |
| ACCTTATCAGAATCATTGCA+TGG | 0.573862 | 5.1:+4835297 | None:intergenic |
| ACGAGAAGGAGGATAAGTTC+CGG | 0.578369 | 5.1:+4838183 | None:intergenic |
| AACACTCTGAAATGAGGACC+TGG | 0.584017 | 5.1:+4833866 | None:intergenic |
| GAACGCTGGTTCGAAACCGC+CGG | 0.587311 | 5.1:-4838202 | MS.gene20368:CDS |
| TTAGCCAACTGACTAGCTGT+AGG | 0.588692 | 5.1:+4837114 | None:intergenic |
| AACTTCCACAACCTGAACGC+TGG | 0.589569 | 5.1:-4838216 | MS.gene20368:CDS |
| AACAGCAGAACAATTGGCGA+AGG | 0.595460 | 5.1:-4837192 | MS.gene20368:CDS |
| ATAGAATCAGTAATTTGAGA+AGG | 0.607446 | 5.1:-4835088 | MS.gene20368:intron |
| TTCATAAGAGGACCCCTGCA+CGG | 0.608163 | 5.1:-4835657 | MS.gene20368:CDS |
| TTTGGAGCACCCATCACAGA+TGG | 0.610704 | 5.1:+4834981 | None:intergenic |
| ATGGGTGCTCCAAAGCATGA+TGG | 0.613189 | 5.1:-4834972 | MS.gene20368:CDS |
| AGGTTTAGGATGAAGATGAA+CGG | 0.614262 | 5.1:+4838009 | None:intergenic |
| ACCAAGCGGCAGAAATTAGA+GGG | 0.614941 | 5.1:-4836715 | MS.gene20368:CDS |
| TCACCTCAAAACATCGGAGA+GGG | 0.615996 | 5.1:-4835358 | MS.gene20368:CDS |
| GAAACCTACAGCTAGTCAGT+TGG | 0.618966 | 5.1:-4837118 | MS.gene20368:CDS |
| CTGTACCCAAATTCAAAGCA+CGG | 0.625486 | 5.1:-4835814 | MS.gene20368:CDS |
| GGAATTTCACCTCAAAACAT+CGG | 0.626340 | 5.1:-4835364 | MS.gene20368:CDS |
| TTACTAAAGAGGTCAATTGG+TGG | 0.627296 | 5.1:+4834091 | None:intergenic |
| AGAGGGTGGTCTCTTGCGCA+AGG | 0.627509 | 5.1:-4836698 | MS.gene20368:intron |
| GCAGGGGTCCTCTTATGAAG+AGG | 0.627687 | 5.1:+4835661 | None:intergenic |
| TGAGAGAACGAACGAGAAGG+AGG | 0.631453 | 5.1:+4838172 | None:intergenic |
| AAGGATTTAAAAGAAAACAT+GGG | 0.633883 | 5.1:-4833750 | MS.gene20368:CDS |
| GTAGCTGCTGATCAAAACGC+TGG | 0.635512 | 5.1:-4836037 | MS.gene20368:CDS |
| AAATTCAGGCAACCGTGCAG+GGG | 0.635837 | 5.1:+4835645 | None:intergenic |
| AGTGGTTCTAAGGTGAAACC+AGG | 0.639008 | 5.1:-4833884 | MS.gene20368:CDS |
| TTCCAAGTCTAAATCTGCTG+TGG | 0.647649 | 5.1:-4837163 | MS.gene20368:CDS |
| AAAATGTCTGGATTATTCGG+AGG | 0.654029 | 5.1:-4837840 | MS.gene20368:CDS |
| CCAACTCACCATTGGCACAG+TGG | 0.655857 | 5.1:+4834234 | None:intergenic |
| CTTGAACCAACAATTTGAGG+GGG | 0.660413 | 5.1:+4837081 | None:intergenic |
| CCTTGAACCAACAATTTGAG+GGG | 0.664796 | 5.1:+4837080 | None:intergenic |
| TAGAGAGTCAATCTACCAAG+CGG | 0.667246 | 5.1:-4836729 | MS.gene20368:CDS |
| TGTAGCAGATGTGTGCTGCA+TGG | 0.674174 | 5.1:+4835335 | None:intergenic |
| GGAGAAAAGCAAATTCAGAG+AGG | 0.675935 | 5.1:-4833564 | MS.gene20368:CDS |
| AAACATTCCATAGAGCACAA+AGG | 0.688582 | 5.1:-4835970 | MS.gene20368:CDS |
| GCAGTGAAATCGAAGAAGCG+AGG | 0.694547 | 5.1:+4838262 | None:intergenic |
| TTCACCTCAAAACATCGGAG+AGG | 0.699050 | 5.1:-4835359 | MS.gene20368:CDS |
| AAGCGGCAGAAATTAGAGGG+TGG | 0.721444 | 5.1:-4836712 | MS.gene20368:CDS |
| AGAAGGAGGATAAGTTCCGG+CGG | 0.732383 | 5.1:+4838186 | None:intergenic |
| TGAAGCAGAACACTTGACAG+TGG | 0.737347 | 5.1:-4835837 | MS.gene20368:CDS |
| GTACAATATTGAGTCCAAGG+AGG | 0.778248 | 5.1:-4833515 | MS.gene20368:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTAATATCTAATATTAATA+AGG | + | chr5.1:4835475-4835494 | None:intergenic | 10.0% |
| !!! | TAAATCTTTTTATTTTTTGA+AGG | + | chr5.1:4837299-4837318 | None:intergenic | 10.0% |
| !! | AATATGATATATATGGTAAT+GGG | + | chr5.1:4835553-4835572 | None:intergenic | 15.0% |
| !! | AATGTAGTTCAATATAAATT+GGG | + | chr5.1:4836687-4836706 | None:intergenic | 15.0% |
| !! | CTGATTGAATTATATTTAAA+GGG | - | chr5.1:4837036-4837055 | MS.gene20368:intron | 15.0% |
| !! | TAGATAAATTTAGTATTGTT+AGG | - | chr5.1:4836111-4836130 | MS.gene20368:intron | 15.0% |
| !! | TGGATTATTAGAATTAAAAT+TGG | - | chr5.1:4835228-4835247 | MS.gene20368:intron | 15.0% |
| !!! | ATATTGAGTTATTTCTTTTT+GGG | - | chr5.1:4838098-4838117 | MS.gene20368:intron | 15.0% |
| !!! | TAAATTTAATGTGAGAATTT+TGG | - | chr5.1:4838052-4838071 | MS.gene20368:CDS | 15.0% |
| !!! | TGGATATTGTTATATTTTTA+AGG | + | chr5.1:4838191-4838210 | None:intergenic | 15.0% |
| !! | AAAGACATGAACTATTATTA+TGG | - | chr5.1:4834852-4834871 | MS.gene20368:intron | 20.0% |
| !! | AAATTAGTACTATTGTTTCA+CGG | + | chr5.1:4836851-4836870 | None:intergenic | 20.0% |
| !! | AAGGATTTAAAAGAAAACAT+GGG | - | chr5.1:4838123-4838142 | MS.gene20368:intron | 20.0% |
| !! | AAGTAAAAAATTTCACATGA+TGG | - | chr5.1:4835782-4835801 | MS.gene20368:intron | 20.0% |
| !! | ACATATAACTAAGAAAAGAA+AGG | + | chr5.1:4837535-4837554 | None:intergenic | 20.0% |
| !! | ATCAGAAAAGAAAAAAAGAA+GGG | + | chr5.1:4834530-4834549 | None:intergenic | 20.0% |
| !! | CAATATGATATATATGGTAA+TGG | + | chr5.1:4835554-4835573 | None:intergenic | 20.0% |
| !! | CAATGTAGTTCAATATAAAT+TGG | + | chr5.1:4836688-4836707 | None:intergenic | 20.0% |
| !! | CAATTTATATTGAACTACAT+TGG | - | chr5.1:4836686-4836705 | MS.gene20368:intron | 20.0% |
| !! | GACACTGTAAAAAAAAAATT+AGG | - | chr5.1:4836977-4836996 | MS.gene20368:intron | 20.0% |
| !! | GCTGATTGAATTATATTTAA+AGG | - | chr5.1:4837035-4837054 | MS.gene20368:intron | 20.0% |
| !! | GTGGAAAATTTACTAAATAA+TGG | - | chr5.1:4835667-4835686 | MS.gene20368:CDS | 20.0% |
| !! | TAACTTTCCATTTAATCTAA+TGG | + | chr5.1:4835289-4835308 | None:intergenic | 20.0% |
| !! | TACACATTAATGAGTATAAT+TGG | - | chr5.1:4836399-4836418 | MS.gene20368:intron | 20.0% |
| !! | TATCAGAAAAGAAAAAAAGA+AGG | + | chr5.1:4834531-4834550 | None:intergenic | 20.0% |
| !! | TGATAGAATACTTCTATTAT+GGG | - | chr5.1:4835645-4835664 | MS.gene20368:CDS | 20.0% |
| !! | TTATAAACAGGATCATAAAA+TGG | + | chr5.1:4836297-4836316 | None:intergenic | 20.0% |
| !! | TTATATTTATCGTTGTTCTT+CGG | - | chr5.1:4833781-4833800 | MS.gene20368:intron | 20.0% |
| !!! | AAATTACTGATTCTATTTTG+TGG | + | chr5.1:4836781-4836800 | None:intergenic | 20.0% |
| !!! | ACGATAATACTTTTATTACA+AGG | + | chr5.1:4837349-4837368 | None:intergenic | 20.0% |
| !!! | ATTGTTATATTTTTAAGGCA+GGG | + | chr5.1:4838186-4838205 | None:intergenic | 20.0% |
| !!! | CATATTGAGTTATTTCTTTT+TGG | - | chr5.1:4838097-4838116 | MS.gene20368:intron | 20.0% |
| !!! | TAGTATTGTTAGGTTAATTT+TGG | - | chr5.1:4836121-4836140 | MS.gene20368:intron | 20.0% |
| !!! | TATTGTTATATTTTTAAGGC+AGG | + | chr5.1:4838187-4838206 | None:intergenic | 20.0% |
| !!! | TTGTTTGTGTGATTAATTTT+TGG | + | chr5.1:4836437-4836456 | None:intergenic | 20.0% |
| !!! | TTTTCAAATCCTAATCTATA+TGG | - | chr5.1:4834190-4834209 | MS.gene20368:intron | 20.0% |
| ! | AAGTACTTGTATAATGCATT+AGG | + | chr5.1:4835452-4835471 | None:intergenic | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | + | chr5.1:4834217-4834236 | None:intergenic | 25.0% |
| ! | AATAATCCATAATCTATCAG+AGG | + | chr5.1:4835217-4835236 | None:intergenic | 25.0% |
| ! | ACATTAATGAGTATAATTGG+AGG | - | chr5.1:4836402-4836421 | MS.gene20368:intron | 25.0% |
| ! | ACTTGAACCATTAGATTAAA+TGG | - | chr5.1:4835279-4835298 | MS.gene20368:intron | 25.0% |
| ! | AGGAATTTATAATGCAAAGT+GGG | + | chr5.1:4837876-4837895 | None:intergenic | 25.0% |
| ! | AGTATCAAAAGGAAAAAGTA+AGG | + | chr5.1:4834967-4834986 | None:intergenic | 25.0% |
| ! | AGTGCTCAATATGATATATA+TGG | + | chr5.1:4835560-4835579 | None:intergenic | 25.0% |
| ! | ATAATCTATCAGAGGAAAAA+GGG | + | chr5.1:4835209-4835228 | None:intergenic | 25.0% |
| ! | ATAGAATCAGTAATTTGAGA+AGG | - | chr5.1:4836785-4836804 | MS.gene20368:CDS | 25.0% |
| ! | ATCACACAAACAAGTTTATT+CGG | - | chr5.1:4836444-4836463 | MS.gene20368:intron | 25.0% |
| ! | ATGCAATAGTACAACATTTA+TGG | + | chr5.1:4834939-4834958 | None:intergenic | 25.0% |
| ! | CCAAAATGTTGAAAAACTTT+AGG | + | chr5.1:4833887-4833906 | None:intergenic | 25.0% |
| ! | CTGATAGAATACTTCTATTA+TGG | - | chr5.1:4835644-4835663 | MS.gene20368:CDS | 25.0% |
| ! | CTGATTACCTTCTTATTAAA+TGG | + | chr5.1:4836958-4836977 | None:intergenic | 25.0% |
| ! | GAAAAAATGTCTGGATTATT+CGG | - | chr5.1:4834030-4834049 | MS.gene20368:intron | 25.0% |
| ! | GAAGGATTTAAAAGAAAACA+TGG | - | chr5.1:4838122-4838141 | MS.gene20368:intron | 25.0% |
| ! | TAAAAAAAGATGAAGACGAT+CGG | + | chr5.1:4833764-4833783 | None:intergenic | 25.0% |
| ! | TAAAAAATTTCACATGATGG+CGG | - | chr5.1:4835785-4835804 | MS.gene20368:intron | 25.0% |
| ! | TAGACATTAAATGTCATCTT+TGG | - | chr5.1:4838252-4838271 | MS.gene20368:CDS | 25.0% |
| ! | TCAGAAAAGAAAAAAAGAAG+GGG | + | chr5.1:4834529-4834548 | None:intergenic | 25.0% |
| ! | TGATGTTTCACTAAACTTAA+AGG | + | chr5.1:4838230-4838249 | None:intergenic | 25.0% |
| ! | TTATGAGCATAAATAGTTAG+AGG | + | chr5.1:4836166-4836185 | None:intergenic | 25.0% |
| ! | TTCTGATGAAATTTATTACC+TGG | + | chr5.1:4834081-4834100 | None:intergenic | 25.0% |
| !! | GTTTTTCTTTAATCATTCTC+TGG | - | chr5.1:4837821-4837840 | MS.gene20368:CDS | 25.0% |
| !! | TAGGAAAAGCCTTTTATATT+TGG | - | chr5.1:4838288-4838307 | MS.gene20368:CDS | 25.0% |
| !! | TGCTTTTCTCCAAATATAAA+AGG | + | chr5.1:4838300-4838319 | None:intergenic | 25.0% |
| !! | TGTTGAAAAACTTTAGGTTT+AGG | + | chr5.1:4833881-4833900 | None:intergenic | 25.0% |
| !!! | CCTAAAGTTTTTCAACATTT+TGG | - | chr5.1:4833884-4833903 | MS.gene20368:CDS | 25.0% |
| !!! | GAATAGCTTTATAATCTAAC+TGG | - | chr5.1:4833969-4833988 | MS.gene20368:intron | 25.0% |
| !!! | TAACTGGTTTTTACTTGATT+AGG | - | chr5.1:4833985-4834004 | MS.gene20368:intron | 25.0% |
| !!! | TCAATTTTAGTACAGAAAAG+AGG | - | chr5.1:4837747-4837766 | MS.gene20368:intron | 25.0% |
| ACAACATTTATACAGTACAG+CGG | + | chr5.1:4837563-4837582 | None:intergenic | 30.0% | |
| ATCTGTTTACAAAATGCAGT+AGG | + | chr5.1:4835607-4835626 | None:intergenic | 30.0% | |
| ATGAATTCACCTTACTAAAG+AGG | + | chr5.1:4837796-4837815 | None:intergenic | 30.0% | |
| ATGATCCTGTTTATAAAGAG+TGG | - | chr5.1:4836301-4836320 | MS.gene20368:intron | 30.0% | |
| ATTAGGATTCATACCTTCTT+AGG | + | chr5.1:4835435-4835454 | None:intergenic | 30.0% | |
| CAAGCCATATGAAATGTATT+TGG | + | chr5.1:4835511-4835530 | None:intergenic | 30.0% | |
| CATAATCTATCAGAGGAAAA+AGG | + | chr5.1:4835210-4835229 | None:intergenic | 30.0% | |
| CTTGACACTCAAAAGATATA+CGG | + | chr5.1:4835765-4835784 | None:intergenic | 30.0% | |
| CTTGCTAATCCAATTTGTAA+TGG | + | chr5.1:4835711-4835730 | None:intergenic | 30.0% | |
| GAGGAATTTATAATGCAAAG+TGG | + | chr5.1:4837877-4837896 | None:intergenic | 30.0% | |
| GCTAAAGTTATCATTGTACT+AGG | - | chr5.1:4837273-4837292 | MS.gene20368:intron | 30.0% | |
| GGAAGAAGTTATGTAATCTT+TGG | - | chr5.1:4835009-4835028 | MS.gene20368:intron | 30.0% | |
| GTTTACAACAAAAATTGCCA+TGG | + | chr5.1:4834491-4834510 | None:intergenic | 30.0% | |
| TAGAATACTTCTATTATGGG+TGG | - | chr5.1:4835648-4835667 | MS.gene20368:CDS | 30.0% | |
| TAGAGTTCTCCATTACAAAT+TGG | - | chr5.1:4835699-4835718 | MS.gene20368:intron | 30.0% | |
| TATCCTTACTTCATTAGATG+AGG | + | chr5.1:4835984-4836003 | None:intergenic | 30.0% | |
| TCAAATAAGCCAATCGTAAT+AGG | - | chr5.1:4834423-4834442 | MS.gene20368:intron | 30.0% | |
| TCTTTCCACTCTTTATAAAC+AGG | + | chr5.1:4836309-4836328 | None:intergenic | 30.0% | |
| TGAATTAATATCTTGTGCCA+TGG | - | chr5.1:4834471-4834490 | MS.gene20368:intron | 30.0% | |
| TGTTTCACTAAACTTAAAGG+AGG | + | chr5.1:4838227-4838246 | None:intergenic | 30.0% | |
| TTAAATATCGTTACGAAGTG+AGG | + | chr5.1:4837896-4837915 | None:intergenic | 30.0% | |
| ! | AGGGATAGATTTTTACCTTT+TGG | + | chr5.1:4838167-4838186 | None:intergenic | 30.0% |
| ! | CAAATCTGATTTTGTGATGT+TGG | + | chr5.1:4837156-4837175 | None:intergenic | 30.0% |
| ! | CAATGTTTTTCGTTATGTCT+AGG | + | chr5.1:4836377-4836396 | None:intergenic | 30.0% |
| ! | CTTTTTCCTCTGATAGATTA+TGG | - | chr5.1:4835208-4835227 | MS.gene20368:intron | 30.0% |
| ! | GACAAAAATGCTATGTTTTC+TGG | - | chr5.1:4836754-4836773 | MS.gene20368:CDS | 30.0% |
| ! | GTATGAACTGTCATTTATCA+TGG | + | chr5.1:4836820-4836839 | None:intergenic | 30.0% |
| ! | TTTTGTTGATCAAGATCAGA+TGG | + | chr5.1:4837201-4837220 | None:intergenic | 30.0% |
| !! | ACTTTTTCCTTTTGATACTC+TGG | - | chr5.1:4834968-4834987 | MS.gene20368:CDS | 30.0% |
| !! | ATACCCACTTTTCTGTTTAT+TGG | + | chr5.1:4836085-4836104 | None:intergenic | 30.0% |
| !! | GATGTTACTTTAATTCGTAC+AGG | - | chr5.1:4837721-4837740 | MS.gene20368:intron | 30.0% |
| !! | TGTCTTTTCATCTAAGATAC+AGG | + | chr5.1:4834839-4834858 | None:intergenic | 30.0% |
| !!! | ACATTGGTTTTGAAATCTCT+GGG | - | chr5.1:4836702-4836721 | MS.gene20368:CDS | 30.0% |
| !!! | AGTTATTTCTTTTTGGGTGA+AGG | - | chr5.1:4838104-4838123 | MS.gene20368:intron | 30.0% |
| !!! | TACATTGGTTTTGAAATCTC+TGG | - | chr5.1:4836701-4836720 | MS.gene20368:CDS | 30.0% |
| !!! | TTACAACTTCTGTTGTTTTC+AGG | - | chr5.1:4835063-4835082 | MS.gene20368:intron | 30.0% |
| AAAATGTCTGGATTATTCGG+AGG | - | chr5.1:4834033-4834052 | MS.gene20368:intron | 35.0% | |
| AAACATTCCATAGAGCACAA+AGG | - | chr5.1:4835903-4835922 | MS.gene20368:intron | 35.0% | |
| AACACCAATATCTCCTTTAC+TGG | + | chr5.1:4837597-4837616 | None:intergenic | 35.0% | |
| AATGCGAGTGAAAAAATGTC+TGG | - | chr5.1:4834021-4834040 | MS.gene20368:intron | 35.0% | |
| ACCAATTGACCTCTTTAGTA+AGG | - | chr5.1:4837784-4837803 | MS.gene20368:intron | 35.0% | |
| ACCTTACTAAAGAGGTCAAT+TGG | + | chr5.1:4837788-4837807 | None:intergenic | 35.0% | |
| ACCTTATCAGAATCATTGCA+TGG | + | chr5.1:4836579-4836598 | None:intergenic | 35.0% | |
| ACCTTGAACCAACAATTTGA+GGG | + | chr5.1:4834797-4834816 | None:intergenic | 35.0% | |
| ACCTTTAACAGCAGAACAAT+TGG | - | chr5.1:4834675-4834694 | MS.gene20368:intron | 35.0% | |
| AGCATAAATAGTTAGAGGAG+AGG | + | chr5.1:4836161-4836180 | None:intergenic | 35.0% | |
| AGCTCGACCATTTAATAAGA+AGG | - | chr5.1:4836948-4836967 | MS.gene20368:intron | 35.0% | |
| ATATACGGCACTTTGTCTAA+AGG | + | chr5.1:4835750-4835769 | None:intergenic | 35.0% | |
| ATTAGTGAATTCATGCGTGA+CGG | + | chr5.1:4834136-4834155 | None:intergenic | 35.0% | |
| CAAACAGGACCATATAGATT+AGG | + | chr5.1:4834202-4834221 | None:intergenic | 35.0% | |
| CAAGAGCTTACTTGAAATTC+AGG | + | chr5.1:4836245-4836264 | None:intergenic | 35.0% | |
| CAGAAGTTGTAAATGACGAA+AGG | + | chr5.1:4835055-4835074 | None:intergenic | 35.0% | |
| CATCATTACCTCTTCATAAG+AGG | - | chr5.1:4836204-4836223 | MS.gene20368:intron | 35.0% | |
| CATGCTACAAATCAAACATG+AGG | + | chr5.1:4835254-4835273 | None:intergenic | 35.0% | |
| CCATATGAAATGTATTTGGC+AGG | + | chr5.1:4835507-4835526 | None:intergenic | 35.0% | |
| CCTGCCAAATACATTTCATA+TGG | - | chr5.1:4835504-4835523 | MS.gene20368:intron | 35.0% | |
| CTAATCTATATGGTCCTGTT+TGG | - | chr5.1:4834200-4834219 | MS.gene20368:intron | 35.0% | |
| CTCTTATGAAGAGGTAATGA+TGG | + | chr5.1:4836206-4836225 | None:intergenic | 35.0% | |
| CTTAGAACCACTATTTGACT+GGG | + | chr5.1:4837981-4838000 | None:intergenic | 35.0% | |
| CTTCCTCATCTAATGAAGTA+AGG | - | chr5.1:4835978-4835997 | MS.gene20368:CDS | 35.0% | |
| CTTTCCAGTAAAGGAGATAT+TGG | - | chr5.1:4837590-4837609 | MS.gene20368:intron | 35.0% | |
| GAAAGGAAATGCAGTTCATT+TGG | + | chr5.1:4835038-4835057 | None:intergenic | 35.0% | |
| GAAGCAAGAAATCATGATGA+TGG | - | chr5.1:4833529-4833548 | MS.gene20368:CDS | 35.0% | |
| GAGAAAAGCAAATTCAGAGA+GGG | - | chr5.1:4838310-4838329 | MS.gene20368:CDS | 35.0% | |
| GATAATGACTGCACACAATT+TGG | + | chr5.1:4837074-4837093 | None:intergenic | 35.0% | |
| GATTAGTGTAGCTAACTCTT+TGG | - | chr5.1:4835118-4835137 | MS.gene20368:CDS | 35.0% | |
| GCAGTAGGAATAGAAAGTAA+TGG | + | chr5.1:4835592-4835611 | None:intergenic | 35.0% | |
| GGAATTTCACCTCAAAACAT+CGG | - | chr5.1:4836509-4836528 | MS.gene20368:intron | 35.0% | |
| GGTACAACAAGTGCATAAAA+AGG | - | chr5.1:4835094-4835113 | MS.gene20368:CDS | 35.0% | |
| TAATCCAATCCATCATGCTT+TGG | + | chr5.1:4836913-4836932 | None:intergenic | 35.0% | |
| TACTAAAGAGGTCAATTGGT+GGG | + | chr5.1:4837784-4837803 | None:intergenic | 35.0% | |
| TCCATGCAATGATTCTGATA+AGG | - | chr5.1:4836575-4836594 | MS.gene20368:intron | 35.0% | |
| TGGAAAACAATGTTGGAATG+TGG | - | chr5.1:4833507-4833526 | MS.gene20368:CDS | 35.0% | |
| TGGTTCAAGGTGATTATTGA+AGG | - | chr5.1:4834806-4834825 | MS.gene20368:intron | 35.0% | |
| TGGTTTCCTGTTTAATGTTG+CGG | + | chr5.1:4837622-4837641 | None:intergenic | 35.0% | |
| TTACTAAAGAGGTCAATTGG+TGG | + | chr5.1:4837785-4837804 | None:intergenic | 35.0% | |
| ! | ACAAGCTAATTTTGTCCACA+AGG | - | chr5.1:4835407-4835426 | MS.gene20368:intron | 35.0% |
| ! | AGGTTTAGGATGAAGATGAA+CGG | + | chr5.1:4833867-4833886 | None:intergenic | 35.0% |
| ! | CGTTAAACTTTTCCATCCAA+GGG | + | chr5.1:4837680-4837699 | None:intergenic | 35.0% |
| ! | GAGTGTTTTACACTATTTCC+AGG | - | chr5.1:4834648-4834667 | MS.gene20368:intron | 35.0% |
| ! | GTTAAACTTTTCCATCCAAG+GGG | + | chr5.1:4837679-4837698 | None:intergenic | 35.0% |
| ! | TCGTTAAACTTTTCCATCCA+AGG | + | chr5.1:4837681-4837700 | None:intergenic | 35.0% |
| ! | TGTTTTCCGCAACATTAAAC+AGG | - | chr5.1:4837613-4837632 | MS.gene20368:intron | 35.0% |
| !! | AGGTTTGTTATTGTGCTGTT+CGG | - | chr5.1:4835929-4835948 | MS.gene20368:intron | 35.0% |
| !! | CATTTGTTGTCTTGCTTCTA+AGG | - | chr5.1:4836488-4836507 | MS.gene20368:intron | 35.0% |
| !! | CTCATGTTTGATTTGTAGCA+TGG | - | chr5.1:4835252-4835271 | MS.gene20368:intron | 35.0% |
| !! | CTTATTTTCACAATCACTCC+AGG | + | chr5.1:4834341-4834360 | None:intergenic | 35.0% |
| !! | GATGGATTGGATTATAGTCA+TGG | - | chr5.1:4836919-4836938 | MS.gene20368:intron | 35.0% |
| !! | TCTATGGAATGTTTCTAGCT+CGG | + | chr5.1:4835897-4835916 | None:intergenic | 35.0% |
| !!! | CATTTTTTCACTCGCATTCA+CGG | + | chr5.1:4834019-4834038 | None:intergenic | 35.0% |
| !!! | TGTTGTTTTCAGGTTTCAGA+AGG | - | chr5.1:4835073-4835092 | MS.gene20368:intron | 35.0% |
| AATCAGTTGTCCCTAACATC+TGG | - | chr5.1:4837953-4837972 | MS.gene20368:intron | 40.0% | |
| ACGGCCAATAAACAGAAAAG+TGG | - | chr5.1:4836078-4836097 | MS.gene20368:intron | 40.0% | |
| AGACAACAAATGTGAGCTTC+TGG | + | chr5.1:4836480-4836499 | None:intergenic | 40.0% | |
| AGTGATAACCAACTCACCAT+TGG | + | chr5.1:4837650-4837669 | None:intergenic | 40.0% | |
| CACCTTGAACCAACAATTTG+AGG | + | chr5.1:4834798-4834817 | None:intergenic | 40.0% | |
| CATCAAAATGTTGTGCAACC+AGG | - | chr5.1:4834060-4834079 | MS.gene20368:intron | 40.0% | |
| CATGGGAAATTCCTTTCATC+TGG | - | chr5.1:4838140-4838159 | MS.gene20368:intron | 40.0% | |
| CCAATCGTAATAGGAGTTTG+AGG | - | chr5.1:4834432-4834451 | MS.gene20368:intron | 40.0% | |
| CCTCAAACTCCTATTACGAT+TGG | + | chr5.1:4834435-4834454 | None:intergenic | 40.0% | |
| CCTTAGAACCACTATTTGAC+TGG | + | chr5.1:4837982-4838001 | None:intergenic | 40.0% | |
| CCTTGAACCAACAATTTGAG+GGG | + | chr5.1:4834796-4834815 | None:intergenic | 40.0% | |
| CGGCCAATAAACAGAAAAGT+GGG | - | chr5.1:4836079-4836098 | MS.gene20368:intron | 40.0% | |
| CTGGTACAATATTGAGTCCA+AGG | - | chr5.1:4838355-4838374 | MS.gene20368:CDS | 40.0% | |
| CTGTACCCAAATTCAAAGCA+CGG | - | chr5.1:4836059-4836078 | MS.gene20368:intron | 40.0% | |
| CTTAAAGGAGGAACAGAACA+AGG | + | chr5.1:4838215-4838234 | None:intergenic | 40.0% | |
| CTTCCATACTAGTTCAACAG+AGG | + | chr5.1:4834994-4835013 | None:intergenic | 40.0% | |
| CTTGAACCAACAATTTGAGG+GGG | + | chr5.1:4834795-4834814 | None:intergenic | 40.0% | |
| CTTGTGAGAGTGAGACTATT+CGG | + | chr5.1:4834382-4834401 | None:intergenic | 40.0% | |
| CTTTGGCTGACAAATGATGT+AGG | - | chr5.1:4838269-4838288 | MS.gene20368:CDS | 40.0% | |
| GCCAATTGTTCTGCTGTTAA+AGG | + | chr5.1:4834679-4834698 | None:intergenic | 40.0% | |
| GGAGAAAAGCAAATTCAGAG+AGG | - | chr5.1:4838309-4838328 | MS.gene20368:CDS | 40.0% | |
| GTACAATATTGAGTCCAAGG+AGG | - | chr5.1:4838358-4838377 | MS.gene20368:CDS | 40.0% | |
| GTCAGTTGGCTAAGCAAAAT+CGG | - | chr5.1:4834769-4834788 | MS.gene20368:intron | 40.0% | |
| GTGCAGATACTTTCCAGTAA+AGG | - | chr5.1:4837581-4837600 | MS.gene20368:intron | 40.0% | |
| TAGAGAGTCAATCTACCAAG+CGG | - | chr5.1:4835144-4835163 | MS.gene20368:intron | 40.0% | |
| TTCCAAGTCTAAATCTGCTG+TGG | - | chr5.1:4834710-4834729 | MS.gene20368:intron | 40.0% | |
| TTCCTTTCATCTGGACCAAA+AGG | - | chr5.1:4838149-4838168 | MS.gene20368:intron | 40.0% | |
| TTCTTCGGTTTCAGCATTTG+CGG | - | chr5.1:4833796-4833815 | MS.gene20368:intron | 40.0% | |
| TTGAATTGCTATCTCTGCAC+AGG | - | chr5.1:4836869-4836888 | MS.gene20368:intron | 40.0% | |
| ! | ACTCTAGGAAGCGTAATCTT+GGG | + | chr5.1:4835872-4835891 | None:intergenic | 40.0% |
| ! | ATTGGCCGTGCTTTGAATTT+GGG | + | chr5.1:4836067-4836086 | None:intergenic | 40.0% |
| ! | CCAGTCAAATAGTGGTTCTA+AGG | - | chr5.1:4837979-4837998 | MS.gene20368:intron | 40.0% |
| ! | GAAAGGTGTATCAGAGAAGA+TGG | - | chr5.1:4837446-4837465 | MS.gene20368:intron | 40.0% |
| ! | GTGGTTAGCTCAAGATTCAA+TGG | - | chr5.1:4837122-4837141 | MS.gene20368:CDS | 40.0% |
| ! | TACCTTTTGGTCCAGATGAA+AGG | + | chr5.1:4838154-4838173 | None:intergenic | 40.0% |
| ! | TATTGGCCGTGCTTTGAATT+TGG | + | chr5.1:4836068-4836087 | None:intergenic | 40.0% |
| ! | TCCTCATTTCAGAGTGTTCA+AGG | - | chr5.1:4838012-4838031 | MS.gene20368:CDS | 40.0% |
| ! | TCTGCTTCAGCAGCATTTTT+AGG | + | chr5.1:4836025-4836044 | None:intergenic | 40.0% |
| !! | ACCTTGAACACTCTGAAATG+AGG | + | chr5.1:4838016-4838035 | None:intergenic | 40.0% |
| !! | CTATGGAATGTTTCTAGCTC+GGG | + | chr5.1:4835896-4835915 | None:intergenic | 40.0% |
| !! | GAAGTTGTCTAGTTCTCGAA+AGG | - | chr5.1:4837429-4837448 | MS.gene20368:intron | 40.0% |
| !! | GTTGTTTTCATCAGCTATCC+TGG | - | chr5.1:4834320-4834339 | MS.gene20368:intron | 40.0% |
| !!! | TTCAGCAGCATTTTTAGGTC+TGG | + | chr5.1:4836020-4836039 | None:intergenic | 40.0% |
| AACAGCAGAACAATTGGCGA+AGG | - | chr5.1:4834681-4834700 | MS.gene20368:intron | 45.0% | |
| AACCTGTCACAGGAAAGATG+TGG | + | chr5.1:4835373-4835392 | None:intergenic | 45.0% | |
| AAGGAGGAACAGAACAAGGA+TGG | + | chr5.1:4838211-4838230 | None:intergenic | 45.0% | |
| ACATCTTTCCTGTGACAGGT+TGG | - | chr5.1:4835372-4835391 | MS.gene20368:intron | 45.0% | |
| ACCAAGCGGCAGAAATTAGA+GGG | - | chr5.1:4835158-4835177 | MS.gene20368:intron | 45.0% | |
| ACCTAGTCCTTTGTGCTCTA+TGG | + | chr5.1:4835913-4835932 | None:intergenic | 45.0% | |
| ACGAGAAGGAGGATAAGTTC+CGG | + | chr5.1:4833693-4833712 | None:intergenic | 45.0% | |
| ATACCTTCTTAGGTGCCTTG+TGG | + | chr5.1:4835425-4835444 | None:intergenic | 45.0% | |
| CAAATTCAGAGAGGGAGTGA+GGG | - | chr5.1:4838318-4838337 | MS.gene20368:CDS | 45.0% | |
| CACCACAGCAGATTTAGACT+TGG | + | chr5.1:4834715-4834734 | None:intergenic | 45.0% | |
| CTGCTGTTAAAGGTCATTCC+TGG | + | chr5.1:4834669-4834688 | None:intergenic | 45.0% | |
| GAAACCTACAGCTAGTCAGT+TGG | - | chr5.1:4834755-4834774 | MS.gene20368:intron | 45.0% | |
| GAATGAGAGAACGAACGAGA+AGG | + | chr5.1:4833707-4833726 | None:intergenic | 45.0% | |
| GTTATCACTTTGTCACCCCT+TGG | - | chr5.1:4837661-4837680 | MS.gene20368:intron | 45.0% | |
| TACCAAGCGGCAGAAATTAG+AGG | - | chr5.1:4835157-4835176 | MS.gene20368:intron | 45.0% | |
| TACCACATCTTTCCTGTGAC+AGG | - | chr5.1:4835368-4835387 | MS.gene20368:intron | 45.0% | |
| TCACCTCAAAACATCGGAGA+GGG | - | chr5.1:4836515-4836534 | MS.gene20368:intron | 45.0% | |
| TCCATAGAGCACAAAGGACT+AGG | - | chr5.1:4835909-4835928 | MS.gene20368:intron | 45.0% | |
| TGAAGCAGAACACTTGACAG+TGG | - | chr5.1:4836036-4836055 | MS.gene20368:CDS | 45.0% | |
| TGGCCTCTGTTGAACTAGTA+TGG | - | chr5.1:4834988-4835007 | MS.gene20368:intron | 45.0% | |
| TTCACCTCAAAACATCGGAG+AGG | - | chr5.1:4836514-4836533 | MS.gene20368:intron | 45.0% | |
| TTCACTCGCATTCACGGAAT+TGG | + | chr5.1:4834013-4834032 | None:intergenic | 45.0% | |
| ! | ACAGAGGCCAGAGTATCAAA+AGG | + | chr5.1:4834978-4834997 | None:intergenic | 45.0% |
| ! | CACTCTAGGAAGCGTAATCT+TGG | + | chr5.1:4835873-4835892 | None:intergenic | 45.0% |
| ! | TTAGCCAACTGACTAGCTGT+AGG | + | chr5.1:4834762-4834781 | None:intergenic | 45.0% |
| !! | AACACTCTGAAATGAGGACC+TGG | + | chr5.1:4838010-4838029 | None:intergenic | 45.0% |
| !! | AGTGGTTCTAAGGTGAAACC+AGG | - | chr5.1:4837989-4838008 | MS.gene20368:intron | 45.0% |
| !! | CCCCTCAAATTGTTGGTTCA+AGG | - | chr5.1:4834793-4834812 | MS.gene20368:intron | 45.0% |
| !! | GACTGATTTTTGCTGTGTGC+AGG | - | chr5.1:4836726-4836745 | MS.gene20368:CDS | 45.0% |
| !! | TGCTCCAAAGCATGATGGAT+TGG | - | chr5.1:4836906-4836925 | MS.gene20368:intron | 45.0% |
| !!! | ATTAAATTTAAAATTATAGA+AGG | + | chr5.1:4838042-4838061 | None:intergenic | 5.0% |
| AAATTCAGGCAACCGTGCAG+GGG | + | chr5.1:4836231-4836250 | None:intergenic | 50.0% | |
| AACTTCCACAACCTGAACGC+TGG | - | chr5.1:4833657-4833676 | MS.gene20368:intron | 50.0% | |
| AAGCGGCAGAAATTAGAGGG+TGG | - | chr5.1:4835161-4835180 | MS.gene20368:intron | 50.0% | |
| AATCGGCCCCCTCAAATTGT+TGG | - | chr5.1:4834786-4834805 | MS.gene20368:intron | 50.0% | |
| ACAGGAAACCACTGTGCCAA+TGG | - | chr5.1:4837631-4837650 | MS.gene20368:intron | 50.0% | |
| ACCCTCTAATTTCTGCCGCT+TGG | + | chr5.1:4835162-4835181 | None:intergenic | 50.0% | |
| AGAAGGAGGATAAGTTCCGG+CGG | + | chr5.1:4833690-4833709 | None:intergenic | 50.0% | |
| ATGGGTGCTCCAAAGCATGA+TGG | - | chr5.1:4836901-4836920 | MS.gene20368:intron | 50.0% | |
| GAAATTCAGGCAACCGTGCA+GGG | + | chr5.1:4836232-4836251 | None:intergenic | 50.0% | |
| GCAAATTCAGAGAGGGAGTG+AGG | - | chr5.1:4838317-4838336 | MS.gene20368:CDS | 50.0% | |
| GCAGTGAAATCGAAGAAGCG+AGG | + | chr5.1:4833614-4833633 | None:intergenic | 50.0% | |
| GTAGCTGCTGATCAAAACGC+TGG | - | chr5.1:4835836-4835855 | MS.gene20368:CDS | 50.0% | |
| TCACATCACCAACCTGTCAC+AGG | + | chr5.1:4835383-4835402 | None:intergenic | 50.0% | |
| TCACTTTGTCACCCCTTGGA+TGG | - | chr5.1:4837665-4837684 | MS.gene20368:intron | 50.0% | |
| TGAAATTCAGGCAACCGTGC+AGG | + | chr5.1:4836233-4836252 | None:intergenic | 50.0% | |
| TGACTGGGCTCCAGATGTTA+GGG | + | chr5.1:4837966-4837985 | None:intergenic | 50.0% | |
| TGAGAGAACGAACGAGAAGG+AGG | + | chr5.1:4833704-4833723 | None:intergenic | 50.0% | |
| TGTAGCAGATGTGTGCTGCA+TGG | + | chr5.1:4836541-4836560 | None:intergenic | 50.0% | |
| TTCATAAGAGGACCCCTGCA+CGG | - | chr5.1:4836216-4836235 | MS.gene20368:intron | 50.0% | |
| TTGACTGGGCTCCAGATGTT+AGG | + | chr5.1:4837967-4837986 | None:intergenic | 50.0% | |
| ! | AGGAAGCGTAATCTTGGGCT+TGG | + | chr5.1:4835867-4835886 | None:intergenic | 50.0% |
| ! | TCTGGAGCCCAGTCAAATAG+TGG | - | chr5.1:4837971-4837990 | MS.gene20368:intron | 50.0% |
| ! | TGTCCACAAGGCACCTAAGA+AGG | - | chr5.1:4835419-4835438 | MS.gene20368:intron | 50.0% |
| ! | TTTGGAGCACCCATCACAGA+TGG | + | chr5.1:4836895-4836914 | None:intergenic | 50.0% |
| !! | CCACCTATATGTGCTGACTG+CGG | + | chr5.1:4837106-4837125 | None:intergenic | 50.0% |
| CCAACTCACCATTGGCACAG+TGG | + | chr5.1:4837642-4837661 | None:intergenic | 55.0% | |
| CCACCGCAGTCAGCACATAT+AGG | - | chr5.1:4837100-4837119 | MS.gene20368:CDS | 55.0% | |
| CCACTGTGCCAATGGTGAGT+TGG | - | chr5.1:4837639-4837658 | MS.gene20368:intron | 55.0% | |
| CCGCAGTCAGCACATATAGG+TGG | - | chr5.1:4837103-4837122 | MS.gene20368:CDS | 55.0% | |
| CTGCACAGGCCATCTGTGAT+GGG | - | chr5.1:4836883-4836902 | MS.gene20368:intron | 55.0% | |
| GAGGGTTGCATCAACGAAGC+TGG | - | chr5.1:4838336-4838355 | MS.gene20368:CDS | 55.0% | |
| GCAGGGGTCCTCTTATGAAG+AGG | + | chr5.1:4836215-4836234 | None:intergenic | 55.0% | |
| TCTGCACAGGCCATCTGTGA+TGG | - | chr5.1:4836882-4836901 | MS.gene20368:intron | 55.0% | |
| ! | TGGCCCTCTCCGATGTTTTG+AGG | + | chr5.1:4836521-4836540 | None:intergenic | 55.0% |
| !! | CCTATATGTGCTGACTGCGG+TGG | + | chr5.1:4837103-4837122 | None:intergenic | 55.0% |
| !! | GTTTCTAGCTCGGGCACTCT+AGG | + | chr5.1:4835887-4835906 | None:intergenic | 55.0% |
| !! | TCGAACCAGCGTTCAGGTTG+TGG | + | chr5.1:4833665-4833684 | None:intergenic | 55.0% |
| AGAGGGTGGTCTCTTGCGCA+AGG | - | chr5.1:4835175-4835194 | MS.gene20368:intron | 60.0% | |
| GCGGTTTCGAACCAGCGTTC+AGG | + | chr5.1:4833671-4833690 | None:intergenic | 60.0% | |
| !! | GAACGCTGGTTCGAAACCGC+CGG | - | chr5.1:4833671-4833690 | MS.gene20368:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 4833506 | 4838389 | 4833506 | ID=MS.gene20368 |
| chr5.1 | mRNA | 4833506 | 4838389 | 4833506 | ID=MS.gene20368.t1;Parent=MS.gene20368 |
| chr5.1 | exon | 4838185 | 4838389 | 4838185 | ID=MS.gene20368.t1.exon1;Parent=MS.gene20368.t1 |
| chr5.1 | CDS | 4838185 | 4838389 | 4838185 | ID=cds.MS.gene20368.t1;Parent=MS.gene20368.t1 |
| chr5.1 | exon | 4837990 | 4838085 | 4837990 | ID=MS.gene20368.t1.exon2;Parent=MS.gene20368.t1 |
| chr5.1 | CDS | 4837990 | 4838085 | 4837990 | ID=cds.MS.gene20368.t1;Parent=MS.gene20368.t1 |
| chr5.1 | exon | 4837814 | 4837888 | 4837814 | ID=MS.gene20368.t1.exon3;Parent=MS.gene20368.t1 |
| chr5.1 | CDS | 4837814 | 4837888 | 4837814 | ID=cds.MS.gene20368.t1;Parent=MS.gene20368.t1 |
| chr5.1 | exon | 4837081 | 4837225 | 4837081 | ID=MS.gene20368.t1.exon4;Parent=MS.gene20368.t1 |
| chr5.1 | CDS | 4837081 | 4837225 | 4837081 | ID=cds.MS.gene20368.t1;Parent=MS.gene20368.t1 |
| chr5.1 | exon | 4836699 | 4836810 | 4836699 | ID=MS.gene20368.t1.exon5;Parent=MS.gene20368.t1 |
| chr5.1 | CDS | 4836699 | 4836810 | 4836699 | ID=cds.MS.gene20368.t1;Parent=MS.gene20368.t1 |
| chr5.1 | exon | 4836455 | 4836505 | 4836455 | ID=MS.gene20368.t1.exon6;Parent=MS.gene20368.t1 |
| chr5.1 | CDS | 4836455 | 4836505 | 4836455 | ID=cds.MS.gene20368.t1;Parent=MS.gene20368.t1 |
| chr5.1 | exon | 4835965 | 4836062 | 4835965 | ID=MS.gene20368.t1.exon7;Parent=MS.gene20368.t1 |
| chr5.1 | CDS | 4835965 | 4836062 | 4835965 | ID=cds.MS.gene20368.t1;Parent=MS.gene20368.t1 |
| chr5.1 | exon | 4835799 | 4835874 | 4835799 | ID=MS.gene20368.t1.exon8;Parent=MS.gene20368.t1 |
| chr5.1 | CDS | 4835799 | 4835874 | 4835799 | ID=cds.MS.gene20368.t1;Parent=MS.gene20368.t1 |
| chr5.1 | exon | 4835642 | 4835704 | 4835642 | ID=MS.gene20368.t1.exon9;Parent=MS.gene20368.t1 |
| chr5.1 | CDS | 4835642 | 4835704 | 4835642 | ID=cds.MS.gene20368.t1;Parent=MS.gene20368.t1 |
| chr5.1 | exon | 4835299 | 4835385 | 4835299 | ID=MS.gene20368.t1.exon10;Parent=MS.gene20368.t1 |
| chr5.1 | CDS | 4835299 | 4835385 | 4835299 | ID=cds.MS.gene20368.t1;Parent=MS.gene20368.t1 |
| chr5.1 | exon | 4835089 | 4835147 | 4835089 | ID=MS.gene20368.t1.exon11;Parent=MS.gene20368.t1 |
| chr5.1 | CDS | 4835089 | 4835147 | 4835089 | ID=cds.MS.gene20368.t1;Parent=MS.gene20368.t1 |
| chr5.1 | exon | 4834926 | 4835004 | 4834926 | ID=MS.gene20368.t1.exon12;Parent=MS.gene20368.t1 |
| chr5.1 | CDS | 4834926 | 4835004 | 4834926 | ID=cds.MS.gene20368.t1;Parent=MS.gene20368.t1 |
| chr5.1 | exon | 4834243 | 4834308 | 4834243 | ID=MS.gene20368.t1.exon13;Parent=MS.gene20368.t1 |
| chr5.1 | CDS | 4834243 | 4834308 | 4834243 | ID=cds.MS.gene20368.t1;Parent=MS.gene20368.t1 |
| chr5.1 | exon | 4834090 | 4834152 | 4834090 | ID=MS.gene20368.t1.exon14;Parent=MS.gene20368.t1 |
| chr5.1 | CDS | 4834090 | 4834152 | 4834090 | ID=cds.MS.gene20368.t1;Parent=MS.gene20368.t1 |
| chr5.1 | exon | 4833862 | 4833936 | 4833862 | ID=MS.gene20368.t1.exon15;Parent=MS.gene20368.t1 |
| chr5.1 | CDS | 4833862 | 4833936 | 4833862 | ID=cds.MS.gene20368.t1;Parent=MS.gene20368.t1 |
| chr5.1 | exon | 4833725 | 4833769 | 4833725 | ID=MS.gene20368.t1.exon16;Parent=MS.gene20368.t1 |
| chr5.1 | CDS | 4833725 | 4833769 | 4833725 | ID=cds.MS.gene20368.t1;Parent=MS.gene20368.t1 |
| chr5.1 | exon | 4833506 | 4833604 | 4833506 | ID=MS.gene20368.t1.exon17;Parent=MS.gene20368.t1 |
| chr5.1 | CDS | 4833506 | 4833604 | 4833506 | ID=cds.MS.gene20368.t1;Parent=MS.gene20368.t1 |
| Gene Sequence |
| Protein sequence |
