AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060565


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060565.t1 MTR_4g112035 95.089 672 27 3 1 672 1 666 0.0 1214
MS.gene060565.t1 MTR_0050s0010 58.824 119 49 0 1 119 1 119 9.86e-42 159
MS.gene060565.t1 MTR_0050s0010 29.123 285 137 10 415 667 282 533 2.35e-22 101
MS.gene060565.t1 MTR_4g068050 55.000 120 54 0 1 120 1 120 2.25e-39 155
MS.gene060565.t1 MTR_4g068050 25.934 482 222 18 296 661 245 707 7.42e-20 94.7
MS.gene060565.t1 MTR_5g034370 48.760 121 61 1 1 120 1 121 6.90e-33 134
MS.gene060565.t1 MTR_2g062300 45.082 122 61 2 1 120 1 118 2.71e-21 99.0
MS.gene060565.t1 MTR_2g099095 26.509 464 221 16 302 661 271 718 4.98e-15 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060565.t1 AT4G13370 52.849 702 267 20 1 668 1 672 0.0 621
MS.gene060565.t1 AT3G14170 53.600 125 58 0 1 125 1 125 3.35e-39 152
MS.gene060565.t1 AT3G14170 33.058 242 145 8 425 661 269 498 8.36e-21 96.7
MS.gene060565.t1 AT3G14170 53.600 125 58 0 1 125 1 125 3.43e-39 152
MS.gene060565.t1 AT3G14170 33.058 242 145 8 425 661 270 499 8.33e-21 97.1
MS.gene060565.t1 AT1G08760 54.167 120 55 0 1 120 1 120 9.82e-38 150
MS.gene060565.t1 AT1G23790 48.760 121 61 1 1 120 1 121 3.17e-31 128
MS.gene060565.t1 AT1G23790 25.442 283 177 6 335 609 220 476 8.09e-12 68.6
MS.gene060565.t1 AT1G70340 46.667 120 63 1 1 119 1 120 1.17e-28 120
MS.gene060565.t1 AT1G70340 27.320 194 115 5 421 595 266 452 5.75e-11 65.9
MS.gene060565.t1 AT3G19610 40.833 120 70 1 1 119 29 148 3.81e-23 104
MS.gene060565.t1 AT3G19610 25.773 291 168 8 408 662 331 609 1.86e-15 80.5
MS.gene060565.t1 AT2G31920 39.583 144 68 6 1 126 1 143 3.21e-18 89.4

Find 178 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTGCTTGTAGGAGTTTA+AGG 0.150497 8.4:+15861963 None:intergenic
AATCAAAGTCCATCTCTCTT+TGG 0.278109 8.4:-15859790 MS.gene060565:CDS
CTCAATAATCGTCTTCAATT+AGG 0.282819 8.4:-15861767 MS.gene060565:CDS
CTCTTCTCCTCAAAGTTGTT+TGG 0.293151 8.4:-15860657 MS.gene060565:CDS
CAAATGTGTGGTTCCGAGTT+TGG 0.301462 8.4:-15861303 MS.gene060565:CDS
CTTGTAGGAGTTTAAGGATT+AGG 0.303053 8.4:+15861969 None:intergenic
CAGCCAGTGCGATTGATCTT+AGG 0.304082 8.4:+15859855 None:intergenic
TCTTTGGGTTGAAGCTGCTT+TGG 0.323248 8.4:-15859774 MS.gene060565:CDS
CGAAGACCGCGAGGAAGAAT+TGG 0.326678 8.4:-15861034 MS.gene060565:CDS
GGAGAAATGGAAGCTCTTCT+AGG 0.336586 8.4:+15861170 None:intergenic
ATCAAAGTCCATCTCTCTTT+GGG 0.337514 8.4:-15859789 MS.gene060565:CDS
GAAGCAGGATTTAAAGTGTT+TGG 0.350982 8.4:-15859551 MS.gene060565:CDS
AATGTATAATAAGAAATTTA+AGG 0.353960 8.4:-15860174 MS.gene060565:intron
CAAACTCGGAACCACACATT+TGG 0.375036 8.4:+15861304 None:intergenic
AAATCCAAGTTTGCAGGTCT+TGG 0.376268 8.4:-15860626 MS.gene060565:CDS
CTGTGTCTGGCAAACTTTCA+AGG 0.377282 8.4:-15860550 MS.gene060565:CDS
CAATCTTCTCCCCGGAGAAA+TGG 0.380821 8.4:+15861157 None:intergenic
TCACAATCTGCAGGGAAGTT+TGG 0.388321 8.4:-15861395 MS.gene060565:CDS
ATGCGAGCTACGAGTGGTTC+CGG 0.389994 8.4:+15861647 None:intergenic
GCCACCAAGACCTGCAAACT+TGG 0.401930 8.4:+15860622 None:intergenic
TTCATCTTCCCCGCCGGAGA+TGG 0.407138 8.4:+15861350 None:intergenic
TTACAATTCATGAAAAGAAA+TGG 0.412348 8.4:-15860598 MS.gene060565:CDS
TTCTGATATGTTGGCTGGAT+CGG 0.412742 8.4:-15861057 MS.gene060565:CDS
GTTCCTCTTGATGCTGTGTC+TGG 0.415818 8.4:-15860563 MS.gene060565:CDS
TCTGGCAAACTTTCAAGGCT+TGG 0.416539 8.4:-15860545 MS.gene060565:CDS
ACACTTTAAATCCTGCTTCA+AGG 0.421734 8.4:+15859555 None:intergenic
TCTACCTCCAAACAACTTTG+AGG 0.422189 8.4:+15860650 None:intergenic
AAGATTTCTGATATGTTGGC+TGG 0.422950 8.4:-15861062 MS.gene060565:CDS
TTCTAAGATTTCTGATATGT+TGG 0.426049 8.4:-15861066 MS.gene060565:CDS
TAGAAGAGCTTCCATTTCTC+CGG 0.433087 8.4:-15861168 MS.gene060565:CDS
TTGTGCGGTGGTTGTGTTGG+TGG 0.437876 8.4:+15861553 None:intergenic
AAGGGGTGGCGCGTGGGGAG+AGG 0.444224 8.4:+15861680 None:intergenic
AGCGATCAACGTAGAGGAAC+TGG 0.452421 8.4:+15861744 None:intergenic
CACTTTAAATCCTGCTTCAA+GGG 0.454714 8.4:+15859556 None:intergenic
TTGAGAATGAGATCGGTGTC+AGG 0.455000 8.4:+15861785 None:intergenic
CGACGAAGGGGTGGCGCGTG+GGG 0.457884 8.4:+15861675 None:intergenic
ATGGAAGCTCTTCTAGGATT+CGG 0.459733 8.4:+15861176 None:intergenic
GCGAAGAAGAAGATGGTAGC+TGG 0.461789 8.4:-15861092 MS.gene060565:CDS
TTGTTGTTGATTGATCTGAA+TGG 0.461960 8.4:+15861526 None:intergenic
TCTTAGGACATCATCATAGA+TGG 0.462692 8.4:+15859871 None:intergenic
GGATCATCGGAATCTGATAA+TGG 0.463605 8.4:+15861593 None:intergenic
TGTCGGTGTTCATTGCTTGT+AGG 0.464305 8.4:+15861954 None:intergenic
TTGGACCGCGTGGTTTCTAA+AGG 0.464455 8.4:-15859437 MS.gene060565:CDS
GTAGAGAAATCCAAGTTTGC+AGG 0.469399 8.4:-15860632 MS.gene060565:CDS
AAAATAATTCAGGATGAAGC+AGG 0.470051 8.4:+15859317 None:intergenic
TCCGACGAAGGGGTGGCGCG+TGG 0.470364 8.4:+15861673 None:intergenic
CGGGTACAATTCCGATGAGT+TGG 0.471036 8.4:+15861897 None:intergenic
GTTGAAGAATCCCTTGAAGC+AGG 0.472477 8.4:-15859566 MS.gene060565:CDS
AGGACAATCGGAAGGTTTCA+CGG 0.472653 8.4:-15861268 MS.gene060565:CDS
TGTTGTTGATTGATCTGAAT+GGG 0.478239 8.4:+15861527 None:intergenic
TATTATACATTCAGTAGCAT+TGG 0.478800 8.4:+15860186 None:intergenic
GGCTGCTTCCTTGCCGTCGT+CGG 0.478828 8.4:+15861203 None:intergenic
ACATCTAAGAGTCAAGGAAA+TGG 0.484092 8.4:-15859656 MS.gene060565:CDS
AGAAGAGCTTCCATTTCTCC+GGG 0.485310 8.4:-15861167 MS.gene060565:CDS
GAAGACCGCGAGGAAGAATT+GGG 0.485667 8.4:-15861033 MS.gene060565:CDS
TCCAAGTTTGCAGGTCTTGG+TGG 0.486001 8.4:-15860623 MS.gene060565:CDS
AGATTGTGCGGTGGTTGTGT+TGG 0.486412 8.4:+15861550 None:intergenic
CTCCATCAGAACTTCAGAAA+AGG 0.488000 8.4:-15859703 MS.gene060565:CDS
TTCTCCTCAAAGTTGTTTGG+AGG 0.492108 8.4:-15860654 MS.gene060565:CDS
CCGACGAAGGGGTGGCGCGT+GGG 0.494772 8.4:+15861674 None:intergenic
ACCACACATTTGGACGGTAC+TGG 0.494996 8.4:+15861314 None:intergenic
AACCTAAAGAAAAGAGTGTT+GGG 0.495676 8.4:-15860989 MS.gene060565:CDS
GAGTGTTGGGTCTAAAACTA+GGG 0.500304 8.4:-15860976 MS.gene060565:CDS
TGGACCGCGTGGTTTCTAAA+GGG 0.500717 8.4:-15859436 MS.gene060565:CDS
TGCTGCTGCAGCATTAGAAG+AGG 0.503717 8.4:-15860209 MS.gene060565:CDS
ATGGACTTTGATTGACATGT+TGG 0.503918 8.4:+15859800 None:intergenic
AGATGAACAATGTTCATTCA+CGG 0.504841 8.4:-15861487 MS.gene060565:CDS
AGAGTGTTGGGTCTAAAACT+AGG 0.505716 8.4:-15860977 MS.gene060565:CDS
TAGACAGCCGTCTCCGACGA+CGG 0.506706 8.4:-15861216 MS.gene060565:CDS
TGACAGAAGGAAGAGGGGTG+TGG 0.507074 8.4:+15861714 None:intergenic
TGGTTCCGGCGTTCCGACGA+AGG 0.509243 8.4:+15861661 None:intergenic
ATGAAAGAAACACTGGAGCT+TGG 0.510836 8.4:-15859632 MS.gene060565:CDS
TTCCTTGCCGTCGTCGGAGA+CGG 0.511810 8.4:+15861209 None:intergenic
AACACCGACACACGTGTCAC+CGG 0.513735 8.4:-15861941 MS.gene060565:CDS
GGTTCCGGCGTTCCGACGAA+GGG 0.515235 8.4:+15861662 None:intergenic
GCTAAACGATCACAATCTGC+AGG 0.518004 8.4:-15861404 MS.gene060565:CDS
TTTCTGCTCGAGAGGACAAT+CGG 0.518876 8.4:-15861280 MS.gene060565:CDS
GTTGAGAAAGAAGCCTTCGT+TGG 0.523258 8.4:+15861850 None:intergenic
AAGAGGAGAACGGTGGTCGC+CGG 0.524267 8.4:+15861922 None:intergenic
CCCACGCGCCACCCCTTCGT+CGG 0.526098 8.4:-15861674 MS.gene060565:CDS
TGGGATGAACAAAATGTTGA+AGG 0.528068 8.4:-15861014 MS.gene060565:CDS
CATGAAAAGAAATGGACTGA+TGG 0.533330 8.4:-15860590 MS.gene060565:CDS
GAACCTAAAGAAAAGAGTGT+TGG 0.534909 8.4:-15860990 MS.gene060565:CDS
TCCGATCTCTTCTCCAACGA+AGG 0.541927 8.4:-15861863 MS.gene060565:CDS
GGACAATCGGAAGGTTTCAC+GGG 0.547990 8.4:-15861267 MS.gene060565:CDS
ATACAAAGAAAGAGGATCAT+CGG 0.547997 8.4:+15861580 None:intergenic
GTTGGAGAAGAGATCGGAGC+TGG 0.548071 8.4:+15861868 None:intergenic
GATGAAAATCTCTTCGGCGT+TGG 0.550115 8.4:+15861437 None:intergenic
GAAGCGAGTAAATGCATGGT+TGG 0.550345 8.4:-15859456 MS.gene060565:CDS
AACTTGTCTATGGTTGGCAA+AGG 0.553870 8.4:+15859899 None:intergenic
GCCGGAGATGAAAATCTCTT+CGG 0.553949 8.4:+15861431 None:intergenic
CAAAAGTTGATCCTACATGC+TGG 0.555614 8.4:+15859354 None:intergenic
TGGGAAGAAAGCATTGCCTC+TGG 0.557044 8.4:-15859513 MS.gene060565:CDS
GTGGAGAGATACAAAGAAAG+AGG 0.558315 8.4:+15861572 None:intergenic
GGACGAATGTTGGTGACAGA+AGG 0.561250 8.4:+15861701 None:intergenic
TCTCCGGGGAGAAGATTGTC+CGG 0.562207 8.4:-15861152 MS.gene060565:CDS
GAGTTTGGTTTCTGCTCGAG+AGG 0.563793 8.4:-15861288 MS.gene060565:CDS
CAAACTTTCAAGGCTTGGAA+AGG 0.566906 8.4:-15860540 MS.gene060565:intron
GAGATCGGAGCTGGATAAAG+CGG 0.567835 8.4:+15861877 None:intergenic
TGCTCGAGAGGACAATCGGA+AGG 0.568084 8.4:-15861276 MS.gene060565:CDS
CCGGCGTTCCGACGAAGGGG+TGG 0.569095 8.4:+15861666 None:intergenic
TACTGTCAGAAATGCAAATG+TGG 0.570442 8.4:-15859601 MS.gene060565:CDS
GAGAGAGATCCATCTCCGGC+GGG 0.572867 8.4:-15861359 MS.gene060565:CDS
ACGATTATTGAGAATGAGAT+CGG 0.574044 8.4:+15861778 None:intergenic
CGAAGAAGAAGATGGTAGCT+GGG 0.578184 8.4:-15861091 MS.gene060565:CDS
TCTCCTCTTCTCCAACTCAT+CGG 0.580371 8.4:-15861908 MS.gene060565:CDS
AAATAATTCAGGATGAAGCA+GGG 0.580487 8.4:+15859318 None:intergenic
GGAATCTGATAATGGTTGAA+TGG 0.580488 8.4:+15861601 None:intergenic
AAATGGAATGAAAGAAACAC+TGG 0.581658 8.4:-15859639 MS.gene060565:CDS
TTCTACTGCGAAGAAGAAGA+TGG 0.582612 8.4:-15861099 MS.gene060565:CDS
AGCCGTCTCCGACGACGGCA+AGG 0.583416 8.4:-15861211 MS.gene060565:CDS
CTTAGCACATCTAAGAGTCA+AGG 0.583945 8.4:-15859662 MS.gene060565:CDS
GCAGTAGAATCTCCAACAGC+CGG 0.584352 8.4:+15861113 None:intergenic
ATGTGACAAAACAATAGCAA+TGG 0.584972 8.4:+15859481 None:intergenic
GGCGTTGGTAAATTATCTCG+TGG 0.585036 8.4:+15861452 None:intergenic
TGTGATCGTTTAGCAGTCGC+CGG 0.585413 8.4:+15861413 None:intergenic
GTGAGAGAGAAGAACGTAGG+TGG 0.587901 8.4:+15861808 None:intergenic
CGTGGGGAGAGGACGAATGT+TGG 0.589608 8.4:+15861691 None:intergenic
TGCTGAGAGAGATCCATCTC+CGG 0.591594 8.4:-15861363 MS.gene060565:CDS
CCACCCCTTCGTCGGAACGC+CGG 0.591684 8.4:-15861666 MS.gene060565:CDS
CTCGGAACCACACATTTGGA+CGG 0.593446 8.4:+15861308 None:intergenic
TGTTGGTGACAGAAGGAAGA+GGG 0.595214 8.4:+15861708 None:intergenic
AGGAGTTTAAGGATTAGGCC+TGG 0.595603 8.4:+15861974 None:intergenic
AGATCGGAGCTGGATAAAGC+GGG 0.597846 8.4:+15861878 None:intergenic
TGGCTTTACACACAGAGCAA+AGG 0.599456 8.4:+15859927 None:intergenic
AAAGCATTGCCTCTGGATGG+TGG 0.600362 8.4:-15859506 MS.gene060565:CDS
CCACCGGACAATCTTCTCCC+CGG 0.602241 8.4:+15861149 None:intergenic
GCCTTCGTTGGAGAAGAGAT+CGG 0.602669 8.4:+15861862 None:intergenic
TTTGGCAGGTTTCAATGACA+AGG 0.605429 8.4:-15860751 MS.gene060565:intron
CGGCGAAAACTTGATTCCAC+CGG 0.606042 8.4:+15861133 None:intergenic
AGCTTCAACCCAAAGAGAGA+TGG 0.609494 8.4:+15859781 None:intergenic
ATTCCGATGAGTTGGAGAAG+AGG 0.613210 8.4:+15861905 None:intergenic
TTGCCAGACACAGCATCAAG+AGG 0.613318 8.4:+15860560 None:intergenic
TGAGAATGAGATCGGTGTCA+GGG 0.613668 8.4:+15861786 None:intergenic
GATCTCTTCATCTTCCCCGC+CGG 0.614124 8.4:+15861344 None:intergenic
AAATTATCTCGTGGAGCAAG+TGG 0.614804 8.4:+15861461 None:intergenic
ACCAGTACCGTCCAAATGTG+TGG 0.616450 8.4:-15861315 MS.gene060565:CDS
GAATCCAGGATGCAATGGAA+AGG 0.616518 8.4:-15860252 MS.gene060565:intron
TTGGAGAGAGTGCTAGTGGT+GGG 0.617153 8.4:-15859532 MS.gene060565:CDS
GAACTGAATCCAGGATGCAA+TGG 0.617581 8.4:-15860257 MS.gene060565:intron
TGAGAGAGATCCATCTCCGG+CGG 0.617931 8.4:-15861360 MS.gene060565:CDS
TTAGATGTGCTAAGAGAGTG+TGG 0.620341 8.4:+15859671 None:intergenic
TGGAGTTGAGAGAATCAGAG+AGG 0.621797 8.4:+15861828 None:intergenic
ATTTGAAGCGAGTAAATGCA+TGG 0.624105 8.4:-15859460 MS.gene060565:CDS
TTCATCCCAATTCTTCCTCG+CGG 0.625235 8.4:+15861028 None:intergenic
GTGTTTGGAGAGAGTGCTAG+TGG 0.625689 8.4:-15859536 MS.gene060565:CDS
GTTGGTGACAGAAGGAAGAG+GGG 0.626731 8.4:+15861709 None:intergenic
AATAATTCAGGATGAAGCAG+GGG 0.629849 8.4:+15859319 None:intergenic
TGTCCTAAGATCAATCGCAC+TGG 0.634675 8.4:-15859858 MS.gene060565:CDS
GCTCTTCTAGGATTCGGCGA+AGG 0.635698 8.4:+15861182 None:intergenic
AAGAAAGCATTGCCTCTGGA+TGG 0.635733 8.4:-15859509 MS.gene060565:CDS
AAATGCATGGTTGGACCGCG+TGG 0.636414 8.4:-15859447 MS.gene060565:CDS
ATGTTGGTGACAGAAGGAAG+AGG 0.638385 8.4:+15861707 None:intergenic
ATGGTGAAATGACGAGTGGT+AGG 0.640964 8.4:+15861620 None:intergenic
GGTGAAATGCGAGCTACGAG+TGG 0.649783 8.4:+15861641 None:intergenic
ACAATGGCTTCACTAACACC+AGG 0.650124 8.4:-15861992 MS.gene060565:CDS
GACGGCTGTCTATACCTCGA+CGG 0.652957 8.4:+15861227 None:intergenic
TGAGTTGGAGAAGAGGAGAA+CGG 0.654800 8.4:+15861912 None:intergenic
GGATACTATCTGAAGATCAG+TGG 0.655304 8.4:+15859751 None:intergenic
TCTCGAGCAGAAACCAAACT+CGG 0.655575 8.4:+15861290 None:intergenic
GTCGCCGGTGACACGTGTGT+CGG 0.656725 8.4:+15861937 None:intergenic
TTTGGAGAGAGTGCTAGTGG+TGG 0.657547 8.4:-15859533 MS.gene060565:CDS
GTTCCGGCGTTCCGACGAAG+GGG 0.658890 8.4:+15861663 None:intergenic
AGAGAGATCCATCTCCGGCG+GGG 0.662479 8.4:-15861358 MS.gene060565:CDS
AGGGTGAGAGAGAAGAACGT+AGG 0.672472 8.4:+15861805 None:intergenic
AATGAAAGCGATCAACGTAG+AGG 0.674194 8.4:+15861738 None:intergenic
GATCTGAATGGGAGATTGTG+CGG 0.674327 8.4:+15861538 None:intergenic
CCGCAATTATTGTTCCGTCG+AGG 0.674338 8.4:-15861241 MS.gene060565:CDS
CTAAACGATCACAATCTGCA+GGG 0.675497 8.4:-15861403 MS.gene060565:CDS
GCAATGGAGCCACCATCCAG+AGG 0.690113 8.4:+15859497 None:intergenic
CCGGGGAGAAGATTGTCCGG+TGG 0.691617 8.4:-15861149 MS.gene060565:CDS
CTGGATCGGCGAAGACCGCG+AGG 0.692993 8.4:-15861043 MS.gene060565:CDS
CCTCGACGGAACAATAATTG+CGG 0.694736 8.4:+15861241 None:intergenic
GAAGAGCTTCCATTTCTCCG+GGG 0.716426 8.4:-15861166 MS.gene060565:CDS
CTGAATGGGAGATTGTGCGG+TGG 0.722182 8.4:+15861541 None:intergenic
GTTGGAGAAGAGGAGAACGG+TGG 0.749997 8.4:+15861915 None:intergenic
TTGAATGGTGAAATGACGAG+TGG 0.756930 8.4:+15861616 None:intergenic
GATTCCCTTTAGAAACCACG+CGG 0.796785 8.4:+15859432 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTTTTTTATAT+AGG - chr8.4:15860417-15860436 MS.gene060565:intron 0.0%
!!! TTTTTTTTTTTTTTTATATA+GGG - chr8.4:15860418-15860437 MS.gene060565:intron 0.0%
!! AATGTATAATAAGAAATTTA+AGG - chr8.4:15861140-15861159 MS.gene060565:CDS 10.0%
!! AAATTAAAGAGAAAAATCTA+TGG - chr8.4:15861928-15861947 MS.gene060565:CDS 15.0%
!! TTAATTAATGAATGCTTAAT+TGG - chr8.4:15860447-15860466 MS.gene060565:intron 15.0%
!! TTACAATTCATGAAAAGAAA+TGG - chr8.4:15860716-15860735 MS.gene060565:CDS 20.0%
!!! AATTTAACATTCATTTCTAG+TGG - chr8.4:15860810-15860829 MS.gene060565:intron 20.0%
! AATGATCCATTTACTATTCA+AGG - chr8.4:15861265-15861284 MS.gene060565:CDS 25.0%
! AATTTAGATTGAGCTAAGAA+TGG - chr8.4:15860491-15860510 MS.gene060565:intron 25.0%
! ATGATCCATTTACTATTCAA+GGG - chr8.4:15861266-15861285 MS.gene060565:CDS 25.0%
! GAAGGCAAATTTGATTAAAT+TGG - chr8.4:15861024-15861043 MS.gene060565:CDS 25.0%
! GTTTATGCATTAGAAATGAT+AGG - chr8.4:15860924-15860943 MS.gene060565:intron 25.0%
! TAAAATGAAAACAATGCCAA+TGG + chr8.4:15861230-15861249 None:intergenic 25.0%
! TATTATACATTCAGTAGCAT+TGG + chr8.4:15861131-15861150 None:intergenic 25.0%
! TTAAACCCTTGAATAGTAAA+TGG + chr8.4:15861274-15861293 None:intergenic 25.0%
!! AATCATTGTCATCTGATTTT+CGG + chr8.4:15860609-15860628 None:intergenic 25.0%
!!! TATGTCATTTTCAGTAAGAA+GGG + chr8.4:15861587-15861606 None:intergenic 25.0%
!!! TGAAATGATGCTGATTTTTT+TGG - chr8.4:15860545-15860564 MS.gene060565:CDS 25.0%
!!! TTCTAAGATTTCTGATATGT+TGG - chr8.4:15860248-15860267 MS.gene060565:intron 25.0%
!!! TTTCTAGTGGTCTTATAATA+TGG - chr8.4:15860823-15860842 MS.gene060565:intron 25.0%
AAATGGAATGAAAGAAACAC+TGG - chr8.4:15861675-15861694 MS.gene060565:CDS 30.0%
ACGATTATTGAGAATGAGAT+CGG + chr8.4:15859539-15859558 None:intergenic 30.0%
AGATGAACAATGTTCATTCA+CGG - chr8.4:15859827-15859846 MS.gene060565:CDS 30.0%
ATACAAAGAAAGAGGATCAT+CGG + chr8.4:15859737-15859756 None:intergenic 30.0%
ATGATAGGTTTGTAGATGAT+AGG - chr8.4:15860939-15860958 MS.gene060565:intron 30.0%
ATGTGACAAAACAATAGCAA+TGG + chr8.4:15861836-15861855 None:intergenic 30.0%
CCAAAATAATGGTCAATTCA+AGG + chr8.4:15860983-15861002 None:intergenic 30.0%
CTCAATAATCGTCTTCAATT+AGG - chr8.4:15859547-15859566 MS.gene060565:CDS 30.0%
CTTGTTTACTTCCTCTTTAA+TGG - chr8.4:15861303-15861322 MS.gene060565:CDS 30.0%
GATGGTAAAAAACTTGTCTA+TGG + chr8.4:15861428-15861447 None:intergenic 30.0%
GTAAAAAACTTGTCTATGGT+TGG + chr8.4:15861424-15861443 None:intergenic 30.0%
TATACCAAAGTTAAGTCCAT+TGG - chr8.4:15861211-15861230 MS.gene060565:CDS 30.0%
! CCTTGAATTGACCATTATTT+TGG - chr8.4:15860980-15860999 MS.gene060565:CDS 30.0%
! TGTTGTTGATTGATCTGAAT+GGG + chr8.4:15859790-15859809 None:intergenic 30.0%
! TTGTTGTTGATTGATCTGAA+TGG + chr8.4:15859791-15859810 None:intergenic 30.0%
! TTTTATTGTGAACTGAATCC+AGG - chr8.4:15861048-15861067 MS.gene060565:CDS 30.0%
!! AACCTAAAGAAAAGAGTGTT+GGG - chr8.4:15860325-15860344 MS.gene060565:intron 30.0%
!! TCAATCAATTTTGAGAACTC+AGG - chr8.4:15860368-15860387 MS.gene060565:intron 30.0%
!! TTTGACCTGGTTTTTAACAT+TGG - chr8.4:15861174-15861193 MS.gene060565:CDS 30.0%
!! TTTGGCTCTATTTGATTAGA+AGG - chr8.4:15861006-15861025 MS.gene060565:CDS 30.0%
!!! CTATGTCATTTTCAGTAAGA+AGG + chr8.4:15861588-15861607 None:intergenic 30.0%
!!! GCTTGGAAAGGTATTAATTT+TGG - chr8.4:15860786-15860805 MS.gene060565:intron 30.0%
!!! GTATTCACTGCATTTTTTAG+TGG + chr8.4:15860883-15860902 None:intergenic 30.0%
!!! TGACCATTATTTTGGTGATT+TGG - chr8.4:15860988-15861007 MS.gene060565:CDS 30.0%
AAGATTTCTGATATGTTGGC+TGG - chr8.4:15860252-15860271 MS.gene060565:intron 35.0%
AATCAAAGTCCATCTCTCTT+TGG - chr8.4:15861524-15861543 MS.gene060565:CDS 35.0%
ACACTTTAAATCCTGCTTCA+AGG + chr8.4:15861762-15861781 None:intergenic 35.0%
ACATCTAAGAGTCAAGGAAA+TGG - chr8.4:15861658-15861677 MS.gene060565:CDS 35.0%
ATCAAAGTCCATCTCTCTTT+GGG - chr8.4:15861525-15861544 MS.gene060565:CDS 35.0%
ATGGACTTTGATTGACATGT+TGG + chr8.4:15861517-15861536 None:intergenic 35.0%
ATTCATGTCAGCCATTAAAG+AGG + chr8.4:15861317-15861336 None:intergenic 35.0%
CACTTTAAATCCTGCTTCAA+GGG + chr8.4:15861761-15861780 None:intergenic 35.0%
CAGTTCCAATGTTAAAAACC+AGG + chr8.4:15861182-15861201 None:intergenic 35.0%
CTTGTAGGAGTTTAAGGATT+AGG + chr8.4:15859348-15859367 None:intergenic 35.0%
GAGCCAAATCACCAAAATAA+TGG + chr8.4:15860994-15861013 None:intergenic 35.0%
TACTGTCAGAAATGCAAATG+TGG - chr8.4:15861713-15861732 MS.gene060565:CDS 35.0%
TCATTGCTTGTAGGAGTTTA+AGG + chr8.4:15859354-15859373 None:intergenic 35.0%
TCTTAGGACATCATCATAGA+TGG + chr8.4:15861446-15861465 None:intergenic 35.0%
TGGGATGAACAAAATGTTGA+AGG - chr8.4:15860300-15860319 MS.gene060565:intron 35.0%
! AATGCCAATGGACTTAACTT+TGG + chr8.4:15861218-15861237 None:intergenic 35.0%
! ATTTGAAGCGAGTAAATGCA+TGG - chr8.4:15861854-15861873 MS.gene060565:CDS 35.0%
! GAACCTAAAGAAAAGAGTGT+TGG - chr8.4:15860324-15860343 MS.gene060565:intron 35.0%
! GAAGCAGGATTTAAAGTGTT+TGG - chr8.4:15861763-15861782 MS.gene060565:CDS 35.0%
! TATGGTTGGCAAAGGATTTT+TGG + chr8.4:15861410-15861429 None:intergenic 35.0%
!! CATGAAAAGAAATGGACTGA+TGG - chr8.4:15860724-15860743 MS.gene060565:CDS 35.0%
!! GGAATCTGATAATGGTTGAA+TGG + chr8.4:15859716-15859735 None:intergenic 35.0%
!!! ATGATGCTGATTTTTTTGGC+AGG - chr8.4:15860549-15860568 MS.gene060565:CDS 35.0%
!!! TTCACTGCATTTTTTAGTGG+TGG + chr8.4:15860880-15860899 None:intergenic 35.0%
AAATCCAAGTTTGCAGGTCT+TGG - chr8.4:15860688-15860707 MS.gene060565:CDS 40.0%
AAATTATCTCGTGGAGCAAG+TGG + chr8.4:15859856-15859875 None:intergenic 40.0%
AACTTGTCTATGGTTGGCAA+AGG + chr8.4:15861418-15861437 None:intergenic 40.0%
AATGAAAGCGATCAACGTAG+AGG + chr8.4:15859579-15859598 None:intergenic 40.0%
ATGAAAGAAACACTGGAGCT+TGG - chr8.4:15861682-15861701 MS.gene060565:CDS 40.0%
CAAACTTTCAAGGCTTGGAA+AGG - chr8.4:15860774-15860793 MS.gene060565:intron 40.0%
CTAAACGATCACAATCTGCA+GGG - chr8.4:15859911-15859930 MS.gene060565:CDS 40.0%
CTCCATCAGAACTTCAGAAA+AGG - chr8.4:15861611-15861630 MS.gene060565:CDS 40.0%
CTCTTCTCCTCAAAGTTGTT+TGG - chr8.4:15860657-15860676 MS.gene060565:CDS 40.0%
CTTAGCACATCTAAGAGTCA+AGG - chr8.4:15861652-15861671 MS.gene060565:CDS 40.0%
GGATACTATCTGAAGATCAG+TGG + chr8.4:15861566-15861585 None:intergenic 40.0%
GGATCATCGGAATCTGATAA+TGG + chr8.4:15859724-15859743 None:intergenic 40.0%
GGTAACGATTTCATTTGACC+TGG - chr8.4:15861161-15861180 MS.gene060565:CDS 40.0%
GTAGAGAAATCCAAGTTTGC+AGG - chr8.4:15860682-15860701 MS.gene060565:CDS 40.0%
GTGGAGAGATACAAAGAAAG+AGG + chr8.4:15859745-15859764 None:intergenic 40.0%
TAGAAGAGCTTCCATTTCTC+CGG - chr8.4:15860146-15860165 MS.gene060565:intron 40.0%
TAGGTTTGTAGATGATAGGC+TGG - chr8.4:15860943-15860962 MS.gene060565:intron 40.0%
TCTACCTCCAAACAACTTTG+AGG + chr8.4:15860667-15860686 None:intergenic 40.0%
TTAGATGTGCTAAGAGAGTG+TGG + chr8.4:15861646-15861665 None:intergenic 40.0%
TTCTACTGCGAAGAAGAAGA+TGG - chr8.4:15860215-15860234 MS.gene060565:CDS 40.0%
TTCTCCTCAAAGTTGTTTGG+AGG - chr8.4:15860660-15860679 MS.gene060565:CDS 40.0%
TTGAATGGTGAAATGACGAG+TGG + chr8.4:15859701-15859720 None:intergenic 40.0%
TTTGGCAGGTTTCAATGACA+AGG - chr8.4:15860563-15860582 MS.gene060565:CDS 40.0%
! CAAAAGTTGATCCTACATGC+TGG + chr8.4:15861963-15861982 None:intergenic 40.0%
! GACCCAACACTCTTTTCTTT+AGG + chr8.4:15860330-15860349 None:intergenic 40.0%
! TTCTGATATGTTGGCTGGAT+CGG - chr8.4:15860257-15860276 MS.gene060565:intron 40.0%
!! AGAGTGTTGGGTCTAAAACT+AGG - chr8.4:15860337-15860356 MS.gene060565:intron 40.0%
!! ATGGAAGCTCTTCTAGGATT+CGG + chr8.4:15860141-15860160 None:intergenic 40.0%
!! GAGTGTTGGGTCTAAAACTA+GGG - chr8.4:15860338-15860357 MS.gene060565:intron 40.0%
!!! AGCCTTTTCTGAAGTTCTGA+TGG + chr8.4:15861616-15861635 None:intergenic 40.0%
!!! GGTTTTGTTATCCAGCATGT+AGG - chr8.4:15861949-15861968 MS.gene060565:CDS 40.0%
AGAAGAGCTTCCATTTCTCC+GGG - chr8.4:15860147-15860166 MS.gene060565:intron 45.0%
AGCTTCAACCCAAAGAGAGA+TGG + chr8.4:15861536-15861555 None:intergenic 45.0%
AGGACAATCGGAAGGTTTCA+CGG - chr8.4:15860046-15860065 MS.gene060565:intron 45.0%
AGGAGTTTAAGGATTAGGCC+TGG + chr8.4:15859343-15859362 None:intergenic 45.0%
ATGGTGAAATGACGAGTGGT+AGG + chr8.4:15859697-15859716 None:intergenic 45.0%
CAAACTCGGAACCACACATT+TGG + chr8.4:15860013-15860032 None:intergenic 45.0%
CAAATGTGTGGTTCCGAGTT+TGG - chr8.4:15860011-15860030 MS.gene060565:intron 45.0%
CCTCGACGGAACAATAATTG+CGG + chr8.4:15860076-15860095 None:intergenic 45.0%
CGAAGAAGAAGATGGTAGCT+GGG - chr8.4:15860223-15860242 MS.gene060565:CDS 45.0%
CTGTGTCTGGCAAACTTTCA+AGG - chr8.4:15860764-15860783 MS.gene060565:intron 45.0%
CTTTCCTTTCCATTGCATCC+TGG + chr8.4:15861069-15861088 None:intergenic 45.0%
GAACTGAATCCAGGATGCAA+TGG - chr8.4:15861057-15861076 MS.gene060565:CDS 45.0%
GAAGCGAGTAAATGCATGGT+TGG - chr8.4:15861858-15861877 MS.gene060565:CDS 45.0%
GAATCCAGGATGCAATGGAA+AGG - chr8.4:15861062-15861081 MS.gene060565:CDS 45.0%
GATCTGAATGGGAGATTGTG+CGG + chr8.4:15859779-15859798 None:intergenic 45.0%
GATGAAAATCTCTTCGGCGT+TGG + chr8.4:15859880-15859899 None:intergenic 45.0%
GCCGGAGATGAAAATCTCTT+CGG + chr8.4:15859886-15859905 None:intergenic 45.0%
GCTAAACGATCACAATCTGC+AGG - chr8.4:15859910-15859929 MS.gene060565:CDS 45.0%
GGAGAAATGGAAGCTCTTCT+AGG + chr8.4:15860147-15860166 None:intergenic 45.0%
GTCTGAAAACATGCTGAAGC+AGG + chr8.4:15861368-15861387 None:intergenic 45.0%
GTTGAAGAATCCCTTGAAGC+AGG - chr8.4:15861748-15861767 MS.gene060565:CDS 45.0%
GTTGAGAAAGAAGCCTTCGT+TGG + chr8.4:15859467-15859486 None:intergenic 45.0%
TCACAATCTGCAGGGAAGTT+TGG - chr8.4:15859919-15859938 MS.gene060565:CDS 45.0%
TCTCCTCTTCTCCAACTCAT+CGG - chr8.4:15859406-15859425 MS.gene060565:CDS 45.0%
TCTCGAGCAGAAACCAAACT+CGG + chr8.4:15860027-15860046 None:intergenic 45.0%
TCTGGCAAACTTTCAAGGCT+TGG - chr8.4:15860769-15860788 MS.gene060565:intron 45.0%
TGGAGTTGAGAGAATCAGAG+AGG + chr8.4:15859489-15859508 None:intergenic 45.0%
TGTCCTAAGATCAATCGCAC+TGG - chr8.4:15861456-15861475 MS.gene060565:CDS 45.0%
TTCATCCCAATTCTTCCTCG+CGG + chr8.4:15860289-15860308 None:intergenic 45.0%
TTTCTGCTCGAGAGGACAAT+CGG - chr8.4:15860034-15860053 MS.gene060565:intron 45.0%
TTTGTAGATGATAGGCTGGC+TGG - chr8.4:15860947-15860966 MS.gene060565:CDS 45.0%
! ATTCCGATGAGTTGGAGAAG+AGG + chr8.4:15859412-15859431 None:intergenic 45.0%
! GATTCCCTTTAGAAACCACG+CGG + chr8.4:15861885-15861904 None:intergenic 45.0%
! GCCGAAGAGATTTTCATCTC+CGG - chr8.4:15859882-15859901 MS.gene060565:CDS 45.0%
! TGAGTTGGAGAAGAGGAGAA+CGG + chr8.4:15859405-15859424 None:intergenic 45.0%
! TGGCTTTACACACAGAGCAA+AGG + chr8.4:15861390-15861409 None:intergenic 45.0%
! TGTCGGTGTTCATTGCTTGT+AGG + chr8.4:15859363-15859382 None:intergenic 45.0%
! TTGAGAATGAGATCGGTGTC+AGG + chr8.4:15859532-15859551 None:intergenic 45.0%
!! AAGAAAGCATTGCCTCTGGA+TGG - chr8.4:15861805-15861824 MS.gene060565:CDS 45.0%
!! ATGTTGGTGACAGAAGGAAG+AGG + chr8.4:15859610-15859629 None:intergenic 45.0%
!! GGCGTTGGTAAATTATCTCG+TGG + chr8.4:15859865-15859884 None:intergenic 45.0%
!! TCTTTGGGTTGAAGCTGCTT+TGG - chr8.4:15861540-15861559 MS.gene060565:CDS 45.0%
!! TGAGAATGAGATCGGTGTCA+GGG + chr8.4:15859531-15859550 None:intergenic 45.0%
!! TGTTGGTGACAGAAGGAAGA+GGG + chr8.4:15859609-15859628 None:intergenic 45.0%
ACCACACATTTGGACGGTAC+TGG + chr8.4:15860003-15860022 None:intergenic 50.0%
ACCAGTACCGTCCAAATGTG+TGG - chr8.4:15859999-15860018 MS.gene060565:intron 50.0%
AGATCGGAGCTGGATAAAGC+GGG + chr8.4:15859439-15859458 None:intergenic 50.0%
AGATTGTGCGGTGGTTGTGT+TGG + chr8.4:15859767-15859786 None:intergenic 50.0%
AGCGATCAACGTAGAGGAAC+TGG + chr8.4:15859573-15859592 None:intergenic 50.0%
AGGGTGAGAGAGAAGAACGT+AGG + chr8.4:15859512-15859531 None:intergenic 50.0%
CAATCTTCTCCCCGGAGAAA+TGG + chr8.4:15860160-15860179 None:intergenic 50.0%
CAGCCAGTGCGATTGATCTT+AGG + chr8.4:15861462-15861481 None:intergenic 50.0%
CCGCAATTATTGTTCCGTCG+AGG - chr8.4:15860073-15860092 MS.gene060565:intron 50.0%
CGGCGAAAACTTGATTCCAC+CGG + chr8.4:15860184-15860203 None:intergenic 50.0%
CGGGTACAATTCCGATGAGT+TGG + chr8.4:15859420-15859439 None:intergenic 50.0%
CTCGGAACCACACATTTGGA+CGG + chr8.4:15860009-15860028 None:intergenic 50.0%
GAAGACCGCGAGGAAGAATT+GGG - chr8.4:15860281-15860300 MS.gene060565:intron 50.0%
GAAGAGCTTCCATTTCTCCG+GGG - chr8.4:15860148-15860167 MS.gene060565:intron 50.0%
GAGATCGGAGCTGGATAAAG+CGG + chr8.4:15859440-15859459 None:intergenic 50.0%
GCAGTAGAATCTCCAACAGC+CGG + chr8.4:15860204-15860223 None:intergenic 50.0%
GCCTTCGTTGGAGAAGAGAT+CGG + chr8.4:15859455-15859474 None:intergenic 50.0%
GCGAAGAAGAAGATGGTAGC+TGG - chr8.4:15860222-15860241 MS.gene060565:CDS 50.0%
GGACAATCGGAAGGTTTCAC+GGG - chr8.4:15860047-15860066 MS.gene060565:intron 50.0%
GTGAGAGAGAAGAACGTAGG+TGG + chr8.4:15859509-15859528 None:intergenic 50.0%
GTTCCTCTTGATGCTGTGTC+TGG - chr8.4:15860751-15860770 MS.gene060565:intron 50.0%
TCCAAGTTTGCAGGTCTTGG+TGG - chr8.4:15860691-15860710 MS.gene060565:CDS 50.0%
TCCGATCTCTTCTCCAACGA+AGG - chr8.4:15859451-15859470 MS.gene060565:CDS 50.0%
TGCTGAGAGAGATCCATCTC+CGG - chr8.4:15859951-15859970 MS.gene060565:intron 50.0%
TGCTGCTGCAGCATTAGAAG+AGG - chr8.4:15861105-15861124 MS.gene060565:CDS 50.0%
TGGACCGCGTGGTTTCTAAA+GGG - chr8.4:15861878-15861897 MS.gene060565:CDS 50.0%
TGTGATCGTTTAGCAGTCGC+CGG + chr8.4:15859904-15859923 None:intergenic 50.0%
TTGCCAGACACAGCATCAAG+AGG + chr8.4:15860757-15860776 None:intergenic 50.0%
TTGGACCGCGTGGTTTCTAA+AGG - chr8.4:15861877-15861896 MS.gene060565:CDS 50.0%
! CGGTGGAATCAAGTTTTCGC+CGG - chr8.4:15860182-15860201 MS.gene060565:CDS 50.0%
! GAGTTTGGTTTCTGCTCGAG+AGG - chr8.4:15860026-15860045 MS.gene060565:intron 50.0%
!! AAAGCATTGCCTCTGGATGG+TGG - chr8.4:15861808-15861827 MS.gene060565:CDS 50.0%
!! ATCAAGTTTTCGCCGGCTGT+TGG - chr8.4:15860189-15860208 MS.gene060565:CDS 50.0%
!! GGACGAATGTTGGTGACAGA+AGG + chr8.4:15859616-15859635 None:intergenic 50.0%
!! GTGTTTGGAGAGAGTGCTAG+TGG - chr8.4:15861778-15861797 MS.gene060565:CDS 50.0%
!! GTTGGTGACAGAAGGAAGAG+GGG + chr8.4:15859608-15859627 None:intergenic 50.0%
!! TGGGAAGAAAGCATTGCCTC+TGG - chr8.4:15861801-15861820 MS.gene060565:CDS 50.0%
!! TTGGAGAGAGTGCTAGTGGT+GGG - chr8.4:15861782-15861801 MS.gene060565:CDS 50.0%
!! TTTGGAGAGAGTGCTAGTGG+TGG - chr8.4:15861781-15861800 MS.gene060565:CDS 50.0%
AAATGCATGGTTGGACCGCG+TGG - chr8.4:15861867-15861886 MS.gene060565:CDS 55.0%
AACACCGACACACGTGTCAC+CGG - chr8.4:15859373-15859392 MS.gene060565:CDS 55.0%
ATGCGAGCTACGAGTGGTTC+CGG + chr8.4:15859670-15859689 None:intergenic 55.0%
CGAAGACCGCGAGGAAGAAT+TGG - chr8.4:15860280-15860299 MS.gene060565:intron 55.0%
CTGAATGGGAGATTGTGCGG+TGG + chr8.4:15859776-15859795 None:intergenic 55.0%
GACGGCTGTCTATACCTCGA+CGG + chr8.4:15860090-15860109 None:intergenic 55.0%
GATCTCTTCATCTTCCCCGC+CGG + chr8.4:15859973-15859992 None:intergenic 55.0%
GCCACCAAGACCTGCAAACT+TGG + chr8.4:15860695-15860714 None:intergenic 55.0%
GGTGAAATGCGAGCTACGAG+TGG + chr8.4:15859676-15859695 None:intergenic 55.0%
GTTGGAGAAGAGATCGGAGC+TGG + chr8.4:15859449-15859468 None:intergenic 55.0%
GTTGGAGAAGAGGAGAACGG+TGG + chr8.4:15859402-15859421 None:intergenic 55.0%
TCTCCGGGGAGAAGATTGTC+CGG - chr8.4:15860162-15860181 MS.gene060565:intron 55.0%
TGACAGAAGGAAGAGGGGTG+TGG + chr8.4:15859603-15859622 None:intergenic 55.0%
TGAGAGAGATCCATCTCCGG+CGG - chr8.4:15859954-15859973 MS.gene060565:intron 55.0%
TGCTCGAGAGGACAATCGGA+AGG - chr8.4:15860038-15860057 MS.gene060565:intron 55.0%
TTGTGCGGTGGTTGTGTTGG+TGG + chr8.4:15859764-15859783 None:intergenic 55.0%
!! GCTCTTCTAGGATTCGGCGA+AGG + chr8.4:15860135-15860154 None:intergenic 55.0%
AAGAGGAGAACGGTGGTCGC+CGG + chr8.4:15859395-15859414 None:intergenic 60.0%
AGAGAGATCCATCTCCGGCG+GGG - chr8.4:15859956-15859975 MS.gene060565:intron 60.0%
CCACCGGACAATCTTCTCCC+CGG + chr8.4:15860168-15860187 None:intergenic 60.0%
CGTGGGGAGAGGACGAATGT+TGG + chr8.4:15859626-15859645 None:intergenic 60.0%
GAGAGAGATCCATCTCCGGC+GGG - chr8.4:15859955-15859974 MS.gene060565:intron 60.0%
GCAATGGAGCCACCATCCAG+AGG + chr8.4:15861820-15861839 None:intergenic 60.0%
TAGACAGCCGTCTCCGACGA+CGG - chr8.4:15860098-15860117 MS.gene060565:intron 60.0%
TTCATCTTCCCCGCCGGAGA+TGG + chr8.4:15859967-15859986 None:intergenic 60.0%
TTCCTTGCCGTCGTCGGAGA+CGG + chr8.4:15860108-15860127 None:intergenic 60.0%
CCGGGGAGAAGATTGTCCGG+TGG - chr8.4:15860165-15860184 MS.gene060565:intron 65.0%
GGCTGCTTCCTTGCCGTCGT+CGG + chr8.4:15860114-15860133 None:intergenic 65.0%
GGTTCCGGCGTTCCGACGAA+GGG + chr8.4:15859655-15859674 None:intergenic 65.0%
GTCGCCGGTGACACGTGTGT+CGG + chr8.4:15859380-15859399 None:intergenic 65.0%
GTTCCGGCGTTCCGACGAAG+GGG + chr8.4:15859654-15859673 None:intergenic 65.0%
TGGTTCCGGCGTTCCGACGA+AGG + chr8.4:15859656-15859675 None:intergenic 65.0%
AGCCGTCTCCGACGACGGCA+AGG - chr8.4:15860103-15860122 MS.gene060565:intron 70.0%
CCACCCCTTCGTCGGAACGC+CGG - chr8.4:15859648-15859667 MS.gene060565:CDS 70.0%
CTGGATCGGCGAAGACCGCG+AGG - chr8.4:15860271-15860290 MS.gene060565:intron 70.0%
AAGGGGTGGCGCGTGGGGAG+AGG + chr8.4:15859637-15859656 None:intergenic 75.0%
CCCACGCGCCACCCCTTCGT+CGG - chr8.4:15859640-15859659 MS.gene060565:CDS 75.0%
CCGACGAAGGGGTGGCGCGT+GGG + chr8.4:15859643-15859662 None:intergenic 75.0%
CCGGCGTTCCGACGAAGGGG+TGG + chr8.4:15859651-15859670 None:intergenic 75.0%
CGACGAAGGGGTGGCGCGTG+GGG + chr8.4:15859642-15859661 None:intergenic 75.0%
TCCGACGAAGGGGTGGCGCG+TGG + chr8.4:15859644-15859663 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 15859325 15862011 15859325 ID=MS.gene060565
chr8.4 mRNA 15859325 15862011 15859325 ID=MS.gene060565.t1;Parent=MS.gene060565
chr8.4 exon 15860947 15862011 15860947 ID=MS.gene060565.t1.exon1;Parent=MS.gene060565.t1
chr8.4 CDS 15860947 15862011 15860947 ID=cds.MS.gene060565.t1;Parent=MS.gene060565.t1
chr8.4 exon 15860541 15860765 15860541 ID=MS.gene060565.t1.exon2;Parent=MS.gene060565.t1
chr8.4 CDS 15860541 15860765 15860541 ID=cds.MS.gene060565.t1;Parent=MS.gene060565.t1
chr8.4 exon 15860175 15860266 15860175 ID=MS.gene060565.t1.exon3;Parent=MS.gene060565.t1
chr8.4 CDS 15860175 15860266 15860175 ID=cds.MS.gene060565.t1;Parent=MS.gene060565.t1
chr8.4 exon 15859325 15859961 15859325 ID=MS.gene060565.t1.exon4;Parent=MS.gene060565.t1
chr8.4 CDS 15859325 15859961 15859325 ID=cds.MS.gene060565.t1;Parent=MS.gene060565.t1
Gene Sequence

>MS.gene060565

ATGGCTTCACTAACACCAGGCCTAATCCTTAAACTCCTACAAGCAATGAACACCGACACACGTGTCACCGGCGACCACCGTTCTCCTCTTCTCCAACTCATCGGAATTGTACCCGCTTTATCCAGCTCCGATCTCTTCTCCAACGAAGGCTTCTTTCTCAACCTCTCTGATTCTCTCAACTCCACCTACGTTCTTCTCTCTCACCCTGACACCGATCTCATTCTCAATAATCGTCTTCAATTAGGCCAGTTCCTCTACGTTGATCGCTTTCATTTCCACACCCCTCTTCCTTCTGTCACCAACATTCGTCCTCTCCCCACGCGCCACCCCTTCGTCGGAACGCCGGAACCACTCGTAGCTCGCATTTCACCTACCACTCGTCATTTCACCATTCAACCATTATCAGATTCCGATGATCCTCTTTCTTTGTATCTCTCCACCAACACAACCACCGCACAATCTCCCATTCAGATCAATCAACAACAACAACAGCAGCAGAAGAAGATGAACAATGTTCATTCACGGCAACCACTTGCTCCACGAGATAATTTACCAACGCCGAAGAGATTTTCATCTCCGGCGACTGCTAAACGATCACAATCTGCAGGGAAGTTTGGTAAAGTTTCTGCTGAGAGAGATCCATCTCCGGCGGGGAAGATGAAGAGATCTTCTTCACCAGTACCGTCCAAATGTGTGGTTCCGAGTTTGGTTTCTGCTCGAGAGGACAATCGGAAGGTTTCACGGGAAGCCGCAATTATTGTTCCGTCGAGGTATAGACAGCCGTCTCCGACGACGGCAAGGAAGCAGCCTTCGCCGAATCCTAGAAGAGCTTCCATTTCTCCGGGGAGAAGATTGTCCGGTGGAATCAAGTTTTCGCCGGCTGTTGGAGATTCTACTGCGAAGAAGAAGATGGTAGCTGGGATTTCTAAGATTTCTGATATGTTGGCTGGATCGGCGAAGACCGCGAGGAAGAATTGGGATGAACAAAATGTTGAAGGTGAACCTAAAGAAAAGAGTGTTGGGTCTAAAACTAGGGTTGATTCTCAATCAATTTTGAGAACTCAGGTAAATAAACATCAAATTTAAATGCTAATTTTTTTTTTTTTTTATATAGGGCATGAATTAATTAATGAATGCTTAATTGGAAATTCAAATCAGAAATTATGAATTTAGATTGAGCTAAGAATGGAAAGTTTCAGCATATTTAGTGTGATTTGTATTGAAATGATGCTGATTTTTTTGGCAGGTTTCAATGACAAGGAGATTGAGTGATGTGAAAAGCCGAAAATCAGATGACAATGATTCTTCTTCTATAGATGAGAATACTATAGACTCTTCTCCTCAAAGTTGTTTGGAGGTAGAGAAATCCAAGTTTGCAGGTCTTGGTGGCATTACAATTCATGAAAAGAAATGGACTGATGGAAGTGTTCCTCTTGATGCTGTGTCTGGCAAACTTTCAAGGCTTGGAAAGGTATTAATTTTGGAAATTTAACATTCATTTCTAGTGGTCTTATAATATGGAAATCATGCATAAGTATATAAACAGATTGTGCCACCACTAAAAAATGCAGTGAATACAAAAATGCAGTATGATTGAGTGTTTATGCATTAGAAATGATAGGTTTGTAGATGATAGGCTGGCTGGTTTCTTATAACCTTGAATTGACCATTATTTTGGTGATTTGGCTCTATTTGATTAGAAGGCAAATTTGATTAAATTGGTTTTTATTGTGAACTGAATCCAGGATGCAATGGAAAGGAAAGCTCTTGCTTCTGCAGCTGCTGCTGCAGCATTAGAAGAGGCCAATGCTACTGAATGTATAATAAGAAATTTAAGGTAACGATTTCATTTGACCTGGTTTTTAACATTGGAACTGAGTCTTTTATATACCAAAGTTAAGTCCATTGGCATTGTTTTCATTTTATTTAAACTTCAACTGAATGATCCATTTACTATTCAAGGGTTTAAAATTCATAACTTGTTTACTTCCTCTTTAATGGCTGACATGAATTTTACTTATTTTTTTAATGTTCTTTCTGCCTGCTTCAGCATGTTTTCAGACCTTTGCTCTGTGTGTAAAGCCAAAAATCCTTTGCCAACCATAGACAAGTTTTTTACCATCTATGATGATGTCCTAAGATCAATCGCACTGGCTGAATCTGTTGCTAATAGTCACGATGACAGTATTCCAACATGTCAATCAAAGTCCATCTCTCTTTGGGTTGAAGCTGCTTTGGCCACTGATCTTCAGATAGTATCCCTTCTTACTGAAAATGACATAGATACTCCATCAGAACTTCAGAAAAGGCTGTCAAGACCACACTCTCTTAGCACATCTAAGAGTCAAGGAAATGGAATGAAAGAAACACTGGAGCTTGGAACAAGTTTACTGTCAGAAATGCAAATGTGGTTTCTACGCTTTGTTGAAGAATCCCTTGAAGCAGGATTTAAAGTGTTTGGAGAGAGTGCTAGTGGTGGGAAGAAAGCATTGCCTCTGGATGGTGGCTCCATTGCTATTGTTTTGTCACATTTGAAGCGAGTAAATGCATGGTTGGACCGCGTGGTTTCTAAAGGGAATCACTCATTGACAGATAAGATTGAGAAATTAAAGAGAAAAATCTATGGTTTTGTTATCCAGCATGTAGGATCAACTTTTGATAACAAAGCTTCCCCTGCTTCATCCTGA

Protein sequence

>MS.gene060565.t1

MASLTPGLILKLLQAMNTDTRVTGDHRSPLLQLIGIVPALSSSDLFSNEGFFLNLSDSLNSTYVLLSHPDTDLILNNRLQLGQFLYVDRFHFHTPLPSVTNIRPLPTRHPFVGTPEPLVARISPTTRHFTIQPLSDSDDPLSLYLSTNTTTAQSPIQINQQQQQQQKKMNNVHSRQPLAPRDNLPTPKRFSSPATAKRSQSAGKFGKVSAERDPSPAGKMKRSSSPVPSKCVVPSLVSAREDNRKVSREAAIIVPSRYRQPSPTTARKQPSPNPRRASISPGRRLSGGIKFSPAVGDSTAKKKMVAGISKISDMLAGSAKTARKNWDEQNVEGEPKEKSVGSKTRVDSQSILRTQVSMTRRLSDVKSRKSDDNDSSSIDENTIDSSPQSCLEVEKSKFAGLGGITIHEKKWTDGSVPLDAVSGKLSRLGKDAMERKALASAAAAAALEEANATECIIRNLSMFSDLCSVCKAKNPLPTIDKFFTIYDDVLRSIALAESVANSHDDSIPTCQSKSISLWVEAALATDLQIVSLLTENDIDTPSELQKRLSRPHSLSTSKSQGNGMKETLELGTSLLSEMQMWFLRFVEESLEAGFKVFGESASGGKKALPLDGGSIAIVLSHLKRVNAWLDRVVSKGNHSLTDKIEKLKRKIYGFVIQHVGSTFDNKASPASS