AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060473


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060473.t1 MTR_4g112035 94.940 672 28 3 1 672 1 666 0.0 1212
MS.gene060473.t1 MTR_0050s0010 58.824 119 49 0 1 119 1 119 1.03e-41 159
MS.gene060473.t1 MTR_0050s0010 28.772 285 138 9 415 667 282 533 2.42e-22 101
MS.gene060473.t1 MTR_4g068050 55.000 120 54 0 1 120 1 120 2.19e-39 155
MS.gene060473.t1 MTR_4g068050 25.934 482 222 18 296 661 245 707 6.68e-20 94.7
MS.gene060473.t1 MTR_5g034370 48.760 121 61 1 1 120 1 121 6.59e-33 134
MS.gene060473.t1 MTR_2g062300 45.082 122 61 2 1 120 1 118 2.69e-21 99.0
MS.gene060473.t1 MTR_2g099095 26.509 464 221 16 302 661 271 718 4.37e-15 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060473.t1 AT4G13370 52.849 702 267 20 1 668 1 672 0.0 621
MS.gene060473.t1 AT3G14170 53.600 125 58 0 1 125 1 125 3.30e-39 152
MS.gene060473.t1 AT3G14170 33.058 242 145 8 425 661 270 499 7.89e-21 97.1
MS.gene060473.t1 AT3G14170 53.600 125 58 0 1 125 1 125 3.31e-39 152
MS.gene060473.t1 AT3G14170 33.058 242 145 8 425 661 269 498 8.21e-21 97.1
MS.gene060473.t1 AT1G08760 54.167 120 55 0 1 120 1 120 9.38e-38 150
MS.gene060473.t1 AT1G23790 48.760 121 61 1 1 120 1 121 3.00e-31 129
MS.gene060473.t1 AT1G23790 25.442 283 177 6 335 609 220 476 9.30e-12 68.6
MS.gene060473.t1 AT1G70340 46.667 120 63 1 1 119 1 120 1.10e-28 120
MS.gene060473.t1 AT1G70340 27.320 194 115 5 421 595 266 452 5.80e-11 65.9
MS.gene060473.t1 AT3G19610 40.833 120 70 1 1 119 29 148 3.75e-23 105
MS.gene060473.t1 AT3G19610 26.389 288 170 8 408 662 331 609 8.22e-16 81.6
MS.gene060473.t1 AT2G31920 39.583 144 68 6 1 126 1 143 3.10e-18 89.4

Find 178 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTGCTTGTAGGAGTTTA+AGG 0.150497 8.2:+15440951 None:intergenic
AATCAAAGTCCATCTCTCTT+TGG 0.278109 8.2:-15438779 MS.gene060473:CDS
CTCAATAATCGTCTTCAATT+AGG 0.282819 8.2:-15440755 MS.gene060473:CDS
CTCTTCTCCTCAAAGTTGTT+TGG 0.293151 8.2:-15439645 MS.gene060473:CDS
CAAATGTGTGGTTCCGAGTT+TGG 0.301462 8.2:-15440291 MS.gene060473:CDS
CTTGTAGGAGTTTAAGGATT+AGG 0.303053 8.2:+15440957 None:intergenic
CAGCCAGTGCGATTGATCTT+AGG 0.304082 8.2:+15438844 None:intergenic
TCTTTGGGTTGAAGCTGCTT+TGG 0.323248 8.2:-15438763 MS.gene060473:CDS
CGAAGACCGCGAGGAAGAAT+TGG 0.326678 8.2:-15440022 MS.gene060473:CDS
GGAGAAATGGAAGCTCTTCT+AGG 0.336586 8.2:+15440158 None:intergenic
ATCAAAGTCCATCTCTCTTT+GGG 0.337514 8.2:-15438778 MS.gene060473:CDS
GAAGCAGGATTTAAAGTGTT+TGG 0.350982 8.2:-15438540 MS.gene060473:CDS
AATGTATAATAAGAAATTTA+AGG 0.353960 8.2:-15439162 MS.gene060473:intron
CAAACTCGGAACCACACATT+TGG 0.375036 8.2:+15440292 None:intergenic
AAATCCAAGTTTGCAGGTCT+TGG 0.376268 8.2:-15439614 MS.gene060473:CDS
CTGTGTCTGGCAAACTTTCA+AGG 0.377282 8.2:-15439538 MS.gene060473:CDS
CAATCTTCTCCCCGGAGAAA+TGG 0.380821 8.2:+15440145 None:intergenic
TCACAATCTGCAGGGAAGTT+TGG 0.388321 8.2:-15440383 MS.gene060473:CDS
GCCACCAAGACCTGCAAACT+TGG 0.401930 8.2:+15439610 None:intergenic
ATACGAGCTACGAGTGGTTC+CGG 0.406699 8.2:+15440635 None:intergenic
TTCATCTTCCCCGCCGGAGA+TGG 0.407138 8.2:+15440338 None:intergenic
TTACAATTCATGAAAAGAAA+TGG 0.412348 8.2:-15439586 MS.gene060473:CDS
TTCTGATATGTTGGCTGGAT+CGG 0.412742 8.2:-15440045 MS.gene060473:CDS
GTTCCTCTTGATGCTGTGTC+TGG 0.415818 8.2:-15439551 MS.gene060473:CDS
TCTGGCAAACTTTCAAGGCT+TGG 0.416539 8.2:-15439533 MS.gene060473:CDS
ACACTTTAAATCCTGCTTCA+AGG 0.421734 8.2:+15438544 None:intergenic
TCTACCTCCAAACAACTTTG+AGG 0.422189 8.2:+15439638 None:intergenic
AAGATTTCTGATATGTTGGC+TGG 0.422950 8.2:-15440050 MS.gene060473:CDS
TTCTAAGATTTCTGATATGT+TGG 0.426049 8.2:-15440054 MS.gene060473:CDS
TAGAAGAGCTTCCATTTCTC+CGG 0.433087 8.2:-15440156 MS.gene060473:CDS
TTGTGCGGTGGTTGTGTTGG+TGG 0.437876 8.2:+15440541 None:intergenic
AAGGGGTGGCGCGTGGGGAG+AGG 0.444224 8.2:+15440668 None:intergenic
AGCGATCAACGTAGAGGAAC+TGG 0.452421 8.2:+15440732 None:intergenic
CACTTTAAATCCTGCTTCAA+GGG 0.454714 8.2:+15438545 None:intergenic
TTGAGAATGAGATCGGTGTC+AGG 0.455000 8.2:+15440773 None:intergenic
CGACGAAGGGGTGGCGCGTG+GGG 0.457884 8.2:+15440663 None:intergenic
ATGGAAGCTCTTCTAGGATT+CGG 0.459733 8.2:+15440164 None:intergenic
GCGAAGAAGAAGATGGTAGC+TGG 0.461789 8.2:-15440080 MS.gene060473:CDS
TTGTTGTTGATTGATCTGAA+TGG 0.461960 8.2:+15440514 None:intergenic
TCTTAGGACATCATCATAGA+TGG 0.462692 8.2:+15438860 None:intergenic
GGATCATCGGAATCTGATAA+TGG 0.463605 8.2:+15440581 None:intergenic
TGTCGGTGTTCATTGCTTGT+AGG 0.464305 8.2:+15440942 None:intergenic
TTGGACCGCGTGGTTTCTAA+AGG 0.464455 8.2:-15438426 MS.gene060473:CDS
GTAGAGAAATCCAAGTTTGC+AGG 0.469399 8.2:-15439620 MS.gene060473:CDS
AAAATAATTCAGGATGAAGC+AGG 0.470051 8.2:+15438306 None:intergenic
TCCGACGAAGGGGTGGCGCG+TGG 0.470364 8.2:+15440661 None:intergenic
CGGGTACAATTCCGATGAGT+TGG 0.471036 8.2:+15440885 None:intergenic
GTTGAAGAATCCCTTGAAGC+AGG 0.472477 8.2:-15438555 MS.gene060473:CDS
AGGACAATCGGAAGGTTTCA+CGG 0.472653 8.2:-15440256 MS.gene060473:CDS
TGTTGTTGATTGATCTGAAT+GGG 0.478239 8.2:+15440515 None:intergenic
TATTATACATTCAGTAGCAT+TGG 0.478800 8.2:+15439174 None:intergenic
GGCTGCTTCCTTGCCGTCGT+CGG 0.478828 8.2:+15440191 None:intergenic
ACATCTAAGAGTCAAGGAAA+TGG 0.484092 8.2:-15438645 MS.gene060473:CDS
AGAAGAGCTTCCATTTCTCC+GGG 0.485310 8.2:-15440155 MS.gene060473:CDS
GAAGACCGCGAGGAAGAATT+GGG 0.485667 8.2:-15440021 MS.gene060473:CDS
TCCAAGTTTGCAGGTCTTGG+TGG 0.486001 8.2:-15439611 MS.gene060473:CDS
AGATTGTGCGGTGGTTGTGT+TGG 0.486412 8.2:+15440538 None:intergenic
CTCCATCAGAACTTCAGAAA+AGG 0.488000 8.2:-15438692 MS.gene060473:CDS
TTCTCCTCAAAGTTGTTTGG+AGG 0.492108 8.2:-15439642 MS.gene060473:CDS
CCGACGAAGGGGTGGCGCGT+GGG 0.494772 8.2:+15440662 None:intergenic
ACCACACATTTGGACGGTAC+TGG 0.494996 8.2:+15440302 None:intergenic
AACCTAAAGAAAAGAGTGTT+GGG 0.495676 8.2:-15439977 MS.gene060473:CDS
GAGTGTTGGGTCTAAAACTA+GGG 0.500304 8.2:-15439964 MS.gene060473:CDS
TGGACCGCGTGGTTTCTAAA+GGG 0.500717 8.2:-15438425 MS.gene060473:CDS
TGCTGCTGCAGCATTAGAAG+AGG 0.503717 8.2:-15439197 MS.gene060473:CDS
ATGGACTTTGATTGACATGT+TGG 0.503918 8.2:+15438789 None:intergenic
AGATGAACAATGTTCATTCA+CGG 0.504841 8.2:-15440475 MS.gene060473:CDS
AGAGTGTTGGGTCTAAAACT+AGG 0.505716 8.2:-15439965 MS.gene060473:CDS
TAGACAGCCGTCTCCGACGA+CGG 0.506706 8.2:-15440204 MS.gene060473:CDS
TGACAGAAGGAAGAGGGGTG+TGG 0.507074 8.2:+15440702 None:intergenic
TGGTTCCGGCGTTCCGACGA+AGG 0.509243 8.2:+15440649 None:intergenic
ATGAAAGAAACACTGGAGCT+TGG 0.510836 8.2:-15438621 MS.gene060473:CDS
TTCCTTGCCGTCGTCGGAGA+CGG 0.511810 8.2:+15440197 None:intergenic
AACACCGACACACGTGTCAC+CGG 0.513735 8.2:-15440929 MS.gene060473:CDS
GGTTCCGGCGTTCCGACGAA+GGG 0.515235 8.2:+15440650 None:intergenic
GCTAAACGATCACAATCTGC+AGG 0.518004 8.2:-15440392 MS.gene060473:CDS
TTTCTGCTCGAGAGGACAAT+CGG 0.518876 8.2:-15440268 MS.gene060473:CDS
GTTGAGAAAGAAGCCTTCGT+TGG 0.523258 8.2:+15440838 None:intergenic
AAGAGGAGAACGGTGGTCGC+CGG 0.524267 8.2:+15440910 None:intergenic
CCCACGCGCCACCCCTTCGT+CGG 0.526098 8.2:-15440662 MS.gene060473:CDS
TGGGATGAACAAAATGTTGA+AGG 0.528068 8.2:-15440002 MS.gene060473:CDS
CATGAAAAGAAATGGACTGA+TGG 0.533330 8.2:-15439578 MS.gene060473:CDS
GAACCTAAAGAAAAGAGTGT+TGG 0.534909 8.2:-15439978 MS.gene060473:CDS
TCCGATCTCTTCTCCAACGA+AGG 0.541927 8.2:-15440851 MS.gene060473:CDS
GGACAATCGGAAGGTTTCAC+GGG 0.547990 8.2:-15440255 MS.gene060473:CDS
ATACAAAGAAAGAGGATCAT+CGG 0.547997 8.2:+15440568 None:intergenic
GTTGGAGAAGAGATCGGAGC+TGG 0.548071 8.2:+15440856 None:intergenic
GATGAAAATCTCTTCGGCGT+TGG 0.550115 8.2:+15440425 None:intergenic
GAAGCGAGTAAATGCATGGT+TGG 0.550345 8.2:-15438445 MS.gene060473:CDS
AACTTGTCTATGGTTGGCAA+AGG 0.553870 8.2:+15438888 None:intergenic
GCCGGAGATGAAAATCTCTT+CGG 0.553949 8.2:+15440419 None:intergenic
CAAAAGTTGATCCTACATGC+TGG 0.555614 8.2:+15438343 None:intergenic
TGGGAAGAAAGCATTGCCTC+TGG 0.557044 8.2:-15438502 MS.gene060473:CDS
GTGGAGAGATACAAAGAAAG+AGG 0.558315 8.2:+15440560 None:intergenic
GGACGAATGTTGGTGACAGA+AGG 0.561250 8.2:+15440689 None:intergenic
TCTCCGGGGAGAAGATTGTC+CGG 0.562207 8.2:-15440140 MS.gene060473:CDS
GAGTTTGGTTTCTGCTCGAG+AGG 0.563793 8.2:-15440276 MS.gene060473:CDS
CAAACTTTCAAGGCTTGGAA+AGG 0.566906 8.2:-15439528 MS.gene060473:intron
GAGATCGGAGCTGGATAAAG+CGG 0.567835 8.2:+15440865 None:intergenic
TGCTCGAGAGGACAATCGGA+AGG 0.568084 8.2:-15440264 MS.gene060473:CDS
CCGGCGTTCCGACGAAGGGG+TGG 0.569095 8.2:+15440654 None:intergenic
TACTGTCAGAAATGCAAATG+TGG 0.570442 8.2:-15438590 MS.gene060473:CDS
GAGAGAGATCCATCTCCGGC+GGG 0.572867 8.2:-15440347 MS.gene060473:CDS
ACGATTATTGAGAATGAGAT+CGG 0.574044 8.2:+15440766 None:intergenic
CGAAGAAGAAGATGGTAGCT+GGG 0.578184 8.2:-15440079 MS.gene060473:CDS
TCTCCTCTTCTCCAACTCAT+CGG 0.580371 8.2:-15440896 MS.gene060473:CDS
AAATAATTCAGGATGAAGCA+GGG 0.580487 8.2:+15438307 None:intergenic
GGAATCTGATAATGGTTGAA+TGG 0.580488 8.2:+15440589 None:intergenic
AAATGGAATGAAAGAAACAC+TGG 0.581658 8.2:-15438628 MS.gene060473:CDS
TTCTACTGCGAAGAAGAAGA+TGG 0.582612 8.2:-15440087 MS.gene060473:CDS
AGCCGTCTCCGACGACGGCA+AGG 0.583416 8.2:-15440199 MS.gene060473:CDS
CTTAGCACATCTAAGAGTCA+AGG 0.583945 8.2:-15438651 MS.gene060473:CDS
GCAGTAGAATCTCCAACAGC+CGG 0.584352 8.2:+15440101 None:intergenic
ATGTGACAAAACAATAGCAA+TGG 0.584972 8.2:+15438470 None:intergenic
GGCGTTGGTAAATTATCTCG+TGG 0.585036 8.2:+15440440 None:intergenic
TGTGATCGTTTAGCAGTCGC+CGG 0.585413 8.2:+15440401 None:intergenic
GTGAGAGAGAAGAACGTAGG+TGG 0.587901 8.2:+15440796 None:intergenic
CGTGGGGAGAGGACGAATGT+TGG 0.589608 8.2:+15440679 None:intergenic
TGCTGAGAGAGATCCATCTC+CGG 0.591594 8.2:-15440351 MS.gene060473:CDS
CCACCCCTTCGTCGGAACGC+CGG 0.591684 8.2:-15440654 MS.gene060473:CDS
CTCGGAACCACACATTTGGA+CGG 0.593446 8.2:+15440296 None:intergenic
TGTTGGTGACAGAAGGAAGA+GGG 0.595214 8.2:+15440696 None:intergenic
AGGAGTTTAAGGATTAGGCC+TGG 0.595603 8.2:+15440962 None:intergenic
AGATCGGAGCTGGATAAAGC+GGG 0.597846 8.2:+15440866 None:intergenic
TGGCTTTACACACAGAGCAA+AGG 0.599456 8.2:+15438916 None:intergenic
AAAGCATTGCCTCTGGATGG+TGG 0.600362 8.2:-15438495 MS.gene060473:CDS
CCACCGGACAATCTTCTCCC+CGG 0.602241 8.2:+15440137 None:intergenic
GCCTTCGTTGGAGAAGAGAT+CGG 0.602669 8.2:+15440850 None:intergenic
TTTGGCAGGTTTCAATGACA+AGG 0.605429 8.2:-15439739 MS.gene060473:intron
CGGCGAAAACTTGATTCCAC+CGG 0.606042 8.2:+15440121 None:intergenic
AGCTTCAACCCAAAGAGAGA+TGG 0.609494 8.2:+15438770 None:intergenic
ATTCCGATGAGTTGGAGAAG+AGG 0.613210 8.2:+15440893 None:intergenic
TTGCCAGACACAGCATCAAG+AGG 0.613318 8.2:+15439548 None:intergenic
TGAGAATGAGATCGGTGTCA+GGG 0.613668 8.2:+15440774 None:intergenic
GATCTCTTCATCTTCCCCGC+CGG 0.614124 8.2:+15440332 None:intergenic
AAATTATCTCGTGGAGCAAG+TGG 0.614804 8.2:+15440449 None:intergenic
ACCAGTACCGTCCAAATGTG+TGG 0.616450 8.2:-15440303 MS.gene060473:CDS
GAATCCAGGATGCAATGGAA+AGG 0.616518 8.2:-15439240 MS.gene060473:intron
TTGGAGAGAGTGCTAGTGGT+GGG 0.617153 8.2:-15438521 MS.gene060473:CDS
GAACTGAATCCAGGATGCAA+TGG 0.617581 8.2:-15439245 MS.gene060473:intron
TGAGAGAGATCCATCTCCGG+CGG 0.617931 8.2:-15440348 MS.gene060473:CDS
TTAGATGTGCTAAGAGAGTG+TGG 0.620341 8.2:+15438660 None:intergenic
TGGAGTTGAGAGAATCAGAG+AGG 0.621797 8.2:+15440816 None:intergenic
ATTTGAAGCGAGTAAATGCA+TGG 0.624105 8.2:-15438449 MS.gene060473:CDS
TTCATCCCAATTCTTCCTCG+CGG 0.625235 8.2:+15440016 None:intergenic
GTGTTTGGAGAGAGTGCTAG+TGG 0.625689 8.2:-15438525 MS.gene060473:CDS
GTTGGTGACAGAAGGAAGAG+GGG 0.626731 8.2:+15440697 None:intergenic
AATAATTCAGGATGAAGCAG+GGG 0.629849 8.2:+15438308 None:intergenic
TGTCCTAAGATCAATCGCAC+TGG 0.634675 8.2:-15438847 MS.gene060473:CDS
GCTCTTCTAGGATTCGGCGA+AGG 0.635698 8.2:+15440170 None:intergenic
AAGAAAGCATTGCCTCTGGA+TGG 0.635733 8.2:-15438498 MS.gene060473:CDS
AAATGCATGGTTGGACCGCG+TGG 0.636414 8.2:-15438436 MS.gene060473:CDS
ATGTTGGTGACAGAAGGAAG+AGG 0.638385 8.2:+15440695 None:intergenic
ATGGTGAAATGACGAGTGGT+AGG 0.640964 8.2:+15440608 None:intergenic
ACAATGGCTTCACTAACACC+AGG 0.650124 8.2:-15440980 MS.gene060473:CDS
GACGGCTGTCTATACCTCGA+CGG 0.652957 8.2:+15440215 None:intergenic
TGAGTTGGAGAAGAGGAGAA+CGG 0.654800 8.2:+15440900 None:intergenic
GGATACTATCTGAAGATCAG+TGG 0.655304 8.2:+15438740 None:intergenic
TCTCGAGCAGAAACCAAACT+CGG 0.655575 8.2:+15440278 None:intergenic
GTCGCCGGTGACACGTGTGT+CGG 0.656725 8.2:+15440925 None:intergenic
TTTGGAGAGAGTGCTAGTGG+TGG 0.657547 8.2:-15438522 MS.gene060473:CDS
GTTCCGGCGTTCCGACGAAG+GGG 0.658890 8.2:+15440651 None:intergenic
AGAGAGATCCATCTCCGGCG+GGG 0.662479 8.2:-15440346 MS.gene060473:CDS
AGGGTGAGAGAGAAGAACGT+AGG 0.672472 8.2:+15440793 None:intergenic
AATGAAAGCGATCAACGTAG+AGG 0.674194 8.2:+15440726 None:intergenic
GATCTGAATGGGAGATTGTG+CGG 0.674327 8.2:+15440526 None:intergenic
CCGCAATTATTGTTCCGTCG+AGG 0.674338 8.2:-15440229 MS.gene060473:CDS
CTAAACGATCACAATCTGCA+GGG 0.675497 8.2:-15440391 MS.gene060473:CDS
GCAATGGAGCCACCATCCAG+AGG 0.690113 8.2:+15438486 None:intergenic
CCGGGGAGAAGATTGTCCGG+TGG 0.691617 8.2:-15440137 MS.gene060473:CDS
CTGGATCGGCGAAGACCGCG+AGG 0.692993 8.2:-15440031 MS.gene060473:CDS
CCTCGACGGAACAATAATTG+CGG 0.694736 8.2:+15440229 None:intergenic
GGTGAAATACGAGCTACGAG+TGG 0.708456 8.2:+15440629 None:intergenic
GAAGAGCTTCCATTTCTCCG+GGG 0.716426 8.2:-15440154 MS.gene060473:CDS
CTGAATGGGAGATTGTGCGG+TGG 0.722182 8.2:+15440529 None:intergenic
GTTGGAGAAGAGGAGAACGG+TGG 0.749997 8.2:+15440903 None:intergenic
TTGAATGGTGAAATGACGAG+TGG 0.756930 8.2:+15440604 None:intergenic
GATTCCCTTTAGAAACCACG+CGG 0.796785 8.2:+15438421 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTATATA+GGG - chr8.2:15439407-15439426 MS.gene060473:intron 0.0%
!!! TTTTTTTTTTTTTTTTATAT+AGG - chr8.2:15439406-15439425 MS.gene060473:intron 0.0%
!! AATGTATAATAAGAAATTTA+AGG - chr8.2:15440129-15440148 MS.gene060473:CDS 10.0%
!! AAATTAAAGAGAAAAATCTA+TGG - chr8.2:15440916-15440935 MS.gene060473:CDS 15.0%
!! TTAATTAATGAATGCTTAAT+TGG - chr8.2:15439436-15439455 MS.gene060473:intron 15.0%
!! TTACAATTCATGAAAAGAAA+TGG - chr8.2:15439705-15439724 MS.gene060473:CDS 20.0%
!!! AATTTAACATTCATTTCTAG+TGG - chr8.2:15439799-15439818 MS.gene060473:intron 20.0%
! AATGATCCATTTACTATTCA+AGG - chr8.2:15440254-15440273 MS.gene060473:CDS 25.0%
! AATTTAGATTGAGCTAAGAA+TGG - chr8.2:15439480-15439499 MS.gene060473:intron 25.0%
! ATGATCCATTTACTATTCAA+GGG - chr8.2:15440255-15440274 MS.gene060473:CDS 25.0%
! GAAGGCAAATTTGATTAAAT+TGG - chr8.2:15440013-15440032 MS.gene060473:CDS 25.0%
! GTTTATGCATTAGAAATGAT+AGG - chr8.2:15439913-15439932 MS.gene060473:intron 25.0%
! TAAAATGAAAACAATGCCAA+TGG + chr8.2:15440219-15440238 None:intergenic 25.0%
! TATTATACATTCAGTAGCAT+TGG + chr8.2:15440120-15440139 None:intergenic 25.0%
! TTAAACCCTTGAATAGTAAA+TGG + chr8.2:15440263-15440282 None:intergenic 25.0%
!! AATCATTGTCATCTGATTTT+CGG + chr8.2:15439598-15439617 None:intergenic 25.0%
!!! TATGTCATTTTCAGTAAGAA+GGG + chr8.2:15440575-15440594 None:intergenic 25.0%
!!! TGAAATGATGCTGATTTTTT+TGG - chr8.2:15439534-15439553 MS.gene060473:CDS 25.0%
!!! TTCTAAGATTTCTGATATGT+TGG - chr8.2:15439237-15439256 MS.gene060473:intron 25.0%
!!! TTTCTAGTGGTCTTATAATA+TGG - chr8.2:15439812-15439831 MS.gene060473:intron 25.0%
AAATGGAATGAAAGAAACAC+TGG - chr8.2:15440663-15440682 MS.gene060473:CDS 30.0%
ACGATTATTGAGAATGAGAT+CGG + chr8.2:15438528-15438547 None:intergenic 30.0%
AGATGAACAATGTTCATTCA+CGG - chr8.2:15438816-15438835 MS.gene060473:CDS 30.0%
ATACAAAGAAAGAGGATCAT+CGG + chr8.2:15438726-15438745 None:intergenic 30.0%
ATGATAGGTTTGTAGATGAT+AGG - chr8.2:15439928-15439947 MS.gene060473:intron 30.0%
ATGTGACAAAACAATAGCAA+TGG + chr8.2:15440824-15440843 None:intergenic 30.0%
CCAAAATAATGGTCAATTCA+AGG + chr8.2:15439972-15439991 None:intergenic 30.0%
CTCAATAATCGTCTTCAATT+AGG - chr8.2:15438536-15438555 MS.gene060473:CDS 30.0%
CTTGTTTACTTCCTCTTTAA+TGG - chr8.2:15440292-15440311 MS.gene060473:CDS 30.0%
GATGGTAAAAAACTTGTCTA+TGG + chr8.2:15440416-15440435 None:intergenic 30.0%
GTAAAAAACTTGTCTATGGT+TGG + chr8.2:15440412-15440431 None:intergenic 30.0%
TATACCAAAGTTAAGTCCAT+TGG - chr8.2:15440200-15440219 MS.gene060473:CDS 30.0%
! CCTTGAATTGACCATTATTT+TGG - chr8.2:15439969-15439988 MS.gene060473:CDS 30.0%
! TGTTGTTGATTGATCTGAAT+GGG + chr8.2:15438779-15438798 None:intergenic 30.0%
! TTGTTGTTGATTGATCTGAA+TGG + chr8.2:15438780-15438799 None:intergenic 30.0%
! TTTTATTGTGAACTGAATCC+AGG - chr8.2:15440037-15440056 MS.gene060473:CDS 30.0%
!! AACCTAAAGAAAAGAGTGTT+GGG - chr8.2:15439314-15439333 MS.gene060473:intron 30.0%
!! TCAATCAATTTTGAGAACTC+AGG - chr8.2:15439357-15439376 MS.gene060473:intron 30.0%
!! TTTGACCTGGTTTTTAACAT+TGG - chr8.2:15440163-15440182 MS.gene060473:CDS 30.0%
!! TTTGGCTCTATTTGATTAGA+AGG - chr8.2:15439995-15440014 MS.gene060473:CDS 30.0%
!!! CTATGTCATTTTCAGTAAGA+AGG + chr8.2:15440576-15440595 None:intergenic 30.0%
!!! GCTTGGAAAGGTATTAATTT+TGG - chr8.2:15439775-15439794 MS.gene060473:intron 30.0%
!!! GTATTCACTGCATTTTTTAG+TGG + chr8.2:15439872-15439891 None:intergenic 30.0%
!!! TGACCATTATTTTGGTGATT+TGG - chr8.2:15439977-15439996 MS.gene060473:CDS 30.0%
AAGATTTCTGATATGTTGGC+TGG - chr8.2:15439241-15439260 MS.gene060473:intron 35.0%
AATCAAAGTCCATCTCTCTT+TGG - chr8.2:15440512-15440531 MS.gene060473:CDS 35.0%
ACACTTTAAATCCTGCTTCA+AGG + chr8.2:15440750-15440769 None:intergenic 35.0%
ACATCTAAGAGTCAAGGAAA+TGG - chr8.2:15440646-15440665 MS.gene060473:CDS 35.0%
ATACATGTCAGCCATTAAAG+AGG + chr8.2:15440306-15440325 None:intergenic 35.0%
ATCAAAGTCCATCTCTCTTT+GGG - chr8.2:15440513-15440532 MS.gene060473:CDS 35.0%
ATGGACTTTGATTGACATGT+TGG + chr8.2:15440505-15440524 None:intergenic 35.0%
CACTTTAAATCCTGCTTCAA+GGG + chr8.2:15440749-15440768 None:intergenic 35.0%
CAGTTCCAATGTTAAAAACC+AGG + chr8.2:15440171-15440190 None:intergenic 35.0%
CTTGTAGGAGTTTAAGGATT+AGG + chr8.2:15438337-15438356 None:intergenic 35.0%
GAGCCAAATCACCAAAATAA+TGG + chr8.2:15439983-15440002 None:intergenic 35.0%
TACTGTCAGAAATGCAAATG+TGG - chr8.2:15440701-15440720 MS.gene060473:CDS 35.0%
TCATTGCTTGTAGGAGTTTA+AGG + chr8.2:15438343-15438362 None:intergenic 35.0%
TCTTAGGACATCATCATAGA+TGG + chr8.2:15440434-15440453 None:intergenic 35.0%
TGGGATGAACAAAATGTTGA+AGG - chr8.2:15439289-15439308 MS.gene060473:intron 35.0%
! AATGCCAATGGACTTAACTT+TGG + chr8.2:15440207-15440226 None:intergenic 35.0%
! ATTTGAAGCGAGTAAATGCA+TGG - chr8.2:15440842-15440861 MS.gene060473:CDS 35.0%
! GAACCTAAAGAAAAGAGTGT+TGG - chr8.2:15439313-15439332 MS.gene060473:intron 35.0%
! GAAGCAGGATTTAAAGTGTT+TGG - chr8.2:15440751-15440770 MS.gene060473:CDS 35.0%
! TATGGTTGGCAAAGGATTTT+TGG + chr8.2:15440398-15440417 None:intergenic 35.0%
!! CATGAAAAGAAATGGACTGA+TGG - chr8.2:15439713-15439732 MS.gene060473:CDS 35.0%
!! GGAATCTGATAATGGTTGAA+TGG + chr8.2:15438705-15438724 None:intergenic 35.0%
!!! ATGATGCTGATTTTTTTGGC+AGG - chr8.2:15439538-15439557 MS.gene060473:CDS 35.0%
!!! TTCACTGCATTTTTTAGTGG+TGG + chr8.2:15439869-15439888 None:intergenic 35.0%
AAATCCAAGTTTGCAGGTCT+TGG - chr8.2:15439677-15439696 MS.gene060473:CDS 40.0%
AAATTATCTCGTGGAGCAAG+TGG + chr8.2:15438845-15438864 None:intergenic 40.0%
AACTTGTCTATGGTTGGCAA+AGG + chr8.2:15440406-15440425 None:intergenic 40.0%
AATGAAAGCGATCAACGTAG+AGG + chr8.2:15438568-15438587 None:intergenic 40.0%
ATGAAAGAAACACTGGAGCT+TGG - chr8.2:15440670-15440689 MS.gene060473:CDS 40.0%
CAAACTTTCAAGGCTTGGAA+AGG - chr8.2:15439763-15439782 MS.gene060473:intron 40.0%
CTAAACGATCACAATCTGCA+GGG - chr8.2:15438900-15438919 MS.gene060473:CDS 40.0%
CTCCATCAGAACTTCAGAAA+AGG - chr8.2:15440599-15440618 MS.gene060473:CDS 40.0%
CTCTTCTCCTCAAAGTTGTT+TGG - chr8.2:15439646-15439665 MS.gene060473:CDS 40.0%
CTTAGCACATCTAAGAGTCA+AGG - chr8.2:15440640-15440659 MS.gene060473:CDS 40.0%
GGATACTATCTGAAGATCAG+TGG + chr8.2:15440554-15440573 None:intergenic 40.0%
GGATCATCGGAATCTGATAA+TGG + chr8.2:15438713-15438732 None:intergenic 40.0%
GGTAACGATTTCATTTGACC+TGG - chr8.2:15440150-15440169 MS.gene060473:CDS 40.0%
GTAGAGAAATCCAAGTTTGC+AGG - chr8.2:15439671-15439690 MS.gene060473:CDS 40.0%
GTGGAGAGATACAAAGAAAG+AGG + chr8.2:15438734-15438753 None:intergenic 40.0%
TAGAAGAGCTTCCATTTCTC+CGG - chr8.2:15439135-15439154 MS.gene060473:intron 40.0%
TAGGTTTGTAGATGATAGGC+TGG - chr8.2:15439932-15439951 MS.gene060473:intron 40.0%
TCTACCTCCAAACAACTTTG+AGG + chr8.2:15439656-15439675 None:intergenic 40.0%
TTAGATGTGCTAAGAGAGTG+TGG + chr8.2:15440634-15440653 None:intergenic 40.0%
TTCTACTGCGAAGAAGAAGA+TGG - chr8.2:15439204-15439223 MS.gene060473:CDS 40.0%
TTCTCCTCAAAGTTGTTTGG+AGG - chr8.2:15439649-15439668 MS.gene060473:CDS 40.0%
TTGAATGGTGAAATGACGAG+TGG + chr8.2:15438690-15438709 None:intergenic 40.0%
TTTGGCAGGTTTCAATGACA+AGG - chr8.2:15439552-15439571 MS.gene060473:CDS 40.0%
! CAAAAGTTGATCCTACATGC+TGG + chr8.2:15440951-15440970 None:intergenic 40.0%
! GACCCAACACTCTTTTCTTT+AGG + chr8.2:15439319-15439338 None:intergenic 40.0%
! TTCTGATATGTTGGCTGGAT+CGG - chr8.2:15439246-15439265 MS.gene060473:intron 40.0%
!! AGAGTGTTGGGTCTAAAACT+AGG - chr8.2:15439326-15439345 MS.gene060473:intron 40.0%
!! ATGGAAGCTCTTCTAGGATT+CGG + chr8.2:15439130-15439149 None:intergenic 40.0%
!! GAGTGTTGGGTCTAAAACTA+GGG - chr8.2:15439327-15439346 MS.gene060473:intron 40.0%
!!! AGCCTTTTCTGAAGTTCTGA+TGG + chr8.2:15440604-15440623 None:intergenic 40.0%
!!! GGTTTTGTTATCCAGCATGT+AGG - chr8.2:15440937-15440956 MS.gene060473:CDS 40.0%
AGAAGAGCTTCCATTTCTCC+GGG - chr8.2:15439136-15439155 MS.gene060473:intron 45.0%
AGCTTCAACCCAAAGAGAGA+TGG + chr8.2:15440524-15440543 None:intergenic 45.0%
AGGACAATCGGAAGGTTTCA+CGG - chr8.2:15439035-15439054 MS.gene060473:intron 45.0%
AGGAGTTTAAGGATTAGGCC+TGG + chr8.2:15438332-15438351 None:intergenic 45.0%
ATGGTGAAATGACGAGTGGT+AGG + chr8.2:15438686-15438705 None:intergenic 45.0%
CAAACTCGGAACCACACATT+TGG + chr8.2:15439002-15439021 None:intergenic 45.0%
CAAATGTGTGGTTCCGAGTT+TGG - chr8.2:15439000-15439019 MS.gene060473:intron 45.0%
CCTCGACGGAACAATAATTG+CGG + chr8.2:15439065-15439084 None:intergenic 45.0%
CGAAGAAGAAGATGGTAGCT+GGG - chr8.2:15439212-15439231 MS.gene060473:CDS 45.0%
CTGTGTCTGGCAAACTTTCA+AGG - chr8.2:15439753-15439772 MS.gene060473:intron 45.0%
CTTTCCTTTCCATTGCATCC+TGG + chr8.2:15440058-15440077 None:intergenic 45.0%
GAACTGAATCCAGGATGCAA+TGG - chr8.2:15440046-15440065 MS.gene060473:CDS 45.0%
GAAGCGAGTAAATGCATGGT+TGG - chr8.2:15440846-15440865 MS.gene060473:CDS 45.0%
GAATCCAGGATGCAATGGAA+AGG - chr8.2:15440051-15440070 MS.gene060473:CDS 45.0%
GATCTGAATGGGAGATTGTG+CGG + chr8.2:15438768-15438787 None:intergenic 45.0%
GATGAAAATCTCTTCGGCGT+TGG + chr8.2:15438869-15438888 None:intergenic 45.0%
GCCGGAGATGAAAATCTCTT+CGG + chr8.2:15438875-15438894 None:intergenic 45.0%
GCTAAACGATCACAATCTGC+AGG - chr8.2:15438899-15438918 MS.gene060473:CDS 45.0%
GGAGAAATGGAAGCTCTTCT+AGG + chr8.2:15439136-15439155 None:intergenic 45.0%
GTCTGAAAACATGCTGAAGC+AGG + chr8.2:15440356-15440375 None:intergenic 45.0%
GTTGAAGAATCCCTTGAAGC+AGG - chr8.2:15440736-15440755 MS.gene060473:CDS 45.0%
GTTGAGAAAGAAGCCTTCGT+TGG + chr8.2:15438456-15438475 None:intergenic 45.0%
TCACAATCTGCAGGGAAGTT+TGG - chr8.2:15438908-15438927 MS.gene060473:CDS 45.0%
TCTCCTCTTCTCCAACTCAT+CGG - chr8.2:15438395-15438414 MS.gene060473:CDS 45.0%
TCTCGAGCAGAAACCAAACT+CGG + chr8.2:15439016-15439035 None:intergenic 45.0%
TCTGGCAAACTTTCAAGGCT+TGG - chr8.2:15439758-15439777 MS.gene060473:intron 45.0%
TGGAGTTGAGAGAATCAGAG+AGG + chr8.2:15438478-15438497 None:intergenic 45.0%
TGTCCTAAGATCAATCGCAC+TGG - chr8.2:15440444-15440463 MS.gene060473:CDS 45.0%
TTCATCCCAATTCTTCCTCG+CGG + chr8.2:15439278-15439297 None:intergenic 45.0%
TTTCTGCTCGAGAGGACAAT+CGG - chr8.2:15439023-15439042 MS.gene060473:intron 45.0%
TTTGTAGATGATAGGCTGGC+TGG - chr8.2:15439936-15439955 MS.gene060473:CDS 45.0%
! ATTCCGATGAGTTGGAGAAG+AGG + chr8.2:15438401-15438420 None:intergenic 45.0%
! GATTCCCTTTAGAAACCACG+CGG + chr8.2:15440873-15440892 None:intergenic 45.0%
! GCCGAAGAGATTTTCATCTC+CGG - chr8.2:15438871-15438890 MS.gene060473:CDS 45.0%
! TGAGTTGGAGAAGAGGAGAA+CGG + chr8.2:15438394-15438413 None:intergenic 45.0%
! TGGCTTTACACACAGAGCAA+AGG + chr8.2:15440378-15440397 None:intergenic 45.0%
! TGTCGGTGTTCATTGCTTGT+AGG + chr8.2:15438352-15438371 None:intergenic 45.0%
! TTGAGAATGAGATCGGTGTC+AGG + chr8.2:15438521-15438540 None:intergenic 45.0%
!! AAGAAAGCATTGCCTCTGGA+TGG - chr8.2:15440793-15440812 MS.gene060473:CDS 45.0%
!! ATGTTGGTGACAGAAGGAAG+AGG + chr8.2:15438599-15438618 None:intergenic 45.0%
!! GGCGTTGGTAAATTATCTCG+TGG + chr8.2:15438854-15438873 None:intergenic 45.0%
!! TCTTTGGGTTGAAGCTGCTT+TGG - chr8.2:15440528-15440547 MS.gene060473:CDS 45.0%
!! TGAGAATGAGATCGGTGTCA+GGG + chr8.2:15438520-15438539 None:intergenic 45.0%
!! TGTTGGTGACAGAAGGAAGA+GGG + chr8.2:15438598-15438617 None:intergenic 45.0%
ACCACACATTTGGACGGTAC+TGG + chr8.2:15438992-15439011 None:intergenic 50.0%
ACCAGTACCGTCCAAATGTG+TGG - chr8.2:15438988-15439007 MS.gene060473:intron 50.0%
AGATCGGAGCTGGATAAAGC+GGG + chr8.2:15438428-15438447 None:intergenic 50.0%
AGATTGTGCGGTGGTTGTGT+TGG + chr8.2:15438756-15438775 None:intergenic 50.0%
AGCGATCAACGTAGAGGAAC+TGG + chr8.2:15438562-15438581 None:intergenic 50.0%
AGGGTGAGAGAGAAGAACGT+AGG + chr8.2:15438501-15438520 None:intergenic 50.0%
ATACGAGCTACGAGTGGTTC+CGG + chr8.2:15438659-15438678 None:intergenic 50.0%
CAATCTTCTCCCCGGAGAAA+TGG + chr8.2:15439149-15439168 None:intergenic 50.0%
CAGCCAGTGCGATTGATCTT+AGG + chr8.2:15440450-15440469 None:intergenic 50.0%
CCGCAATTATTGTTCCGTCG+AGG - chr8.2:15439062-15439081 MS.gene060473:intron 50.0%
CGGCGAAAACTTGATTCCAC+CGG + chr8.2:15439173-15439192 None:intergenic 50.0%
CGGGTACAATTCCGATGAGT+TGG + chr8.2:15438409-15438428 None:intergenic 50.0%
CTCGGAACCACACATTTGGA+CGG + chr8.2:15438998-15439017 None:intergenic 50.0%
GAAGACCGCGAGGAAGAATT+GGG - chr8.2:15439270-15439289 MS.gene060473:intron 50.0%
GAAGAGCTTCCATTTCTCCG+GGG - chr8.2:15439137-15439156 MS.gene060473:intron 50.0%
GAGATCGGAGCTGGATAAAG+CGG + chr8.2:15438429-15438448 None:intergenic 50.0%
GCAGTAGAATCTCCAACAGC+CGG + chr8.2:15439193-15439212 None:intergenic 50.0%
GCCTTCGTTGGAGAAGAGAT+CGG + chr8.2:15438444-15438463 None:intergenic 50.0%
GCGAAGAAGAAGATGGTAGC+TGG - chr8.2:15439211-15439230 MS.gene060473:CDS 50.0%
GGACAATCGGAAGGTTTCAC+GGG - chr8.2:15439036-15439055 MS.gene060473:intron 50.0%
GGTGAAATACGAGCTACGAG+TGG + chr8.2:15438665-15438684 None:intergenic 50.0%
GTGAGAGAGAAGAACGTAGG+TGG + chr8.2:15438498-15438517 None:intergenic 50.0%
GTTCCTCTTGATGCTGTGTC+TGG - chr8.2:15439740-15439759 MS.gene060473:intron 50.0%
TCCAAGTTTGCAGGTCTTGG+TGG - chr8.2:15439680-15439699 MS.gene060473:CDS 50.0%
TCCGATCTCTTCTCCAACGA+AGG - chr8.2:15438440-15438459 MS.gene060473:CDS 50.0%
TGCTGAGAGAGATCCATCTC+CGG - chr8.2:15438940-15438959 MS.gene060473:intron 50.0%
TGCTGCTGCAGCATTAGAAG+AGG - chr8.2:15440094-15440113 MS.gene060473:CDS 50.0%
TGGACCGCGTGGTTTCTAAA+GGG - chr8.2:15440866-15440885 MS.gene060473:CDS 50.0%
TGTGATCGTTTAGCAGTCGC+CGG + chr8.2:15438893-15438912 None:intergenic 50.0%
TTGCCAGACACAGCATCAAG+AGG + chr8.2:15439746-15439765 None:intergenic 50.0%
TTGGACCGCGTGGTTTCTAA+AGG - chr8.2:15440865-15440884 MS.gene060473:CDS 50.0%
! CGGTGGAATCAAGTTTTCGC+CGG - chr8.2:15439171-15439190 MS.gene060473:CDS 50.0%
! GAGTTTGGTTTCTGCTCGAG+AGG - chr8.2:15439015-15439034 MS.gene060473:intron 50.0%
!! AAAGCATTGCCTCTGGATGG+TGG - chr8.2:15440796-15440815 MS.gene060473:CDS 50.0%
!! ATCAAGTTTTCGCCGGCTGT+TGG - chr8.2:15439178-15439197 MS.gene060473:CDS 50.0%
!! GGACGAATGTTGGTGACAGA+AGG + chr8.2:15438605-15438624 None:intergenic 50.0%
!! GTGTTTGGAGAGAGTGCTAG+TGG - chr8.2:15440766-15440785 MS.gene060473:CDS 50.0%
!! GTTGGTGACAGAAGGAAGAG+GGG + chr8.2:15438597-15438616 None:intergenic 50.0%
!! TGGGAAGAAAGCATTGCCTC+TGG - chr8.2:15440789-15440808 MS.gene060473:CDS 50.0%
!! TTGGAGAGAGTGCTAGTGGT+GGG - chr8.2:15440770-15440789 MS.gene060473:CDS 50.0%
!! TTTGGAGAGAGTGCTAGTGG+TGG - chr8.2:15440769-15440788 MS.gene060473:CDS 50.0%
AAATGCATGGTTGGACCGCG+TGG - chr8.2:15440855-15440874 MS.gene060473:CDS 55.0%
AACACCGACACACGTGTCAC+CGG - chr8.2:15438362-15438381 MS.gene060473:CDS 55.0%
CGAAGACCGCGAGGAAGAAT+TGG - chr8.2:15439269-15439288 MS.gene060473:intron 55.0%
CTGAATGGGAGATTGTGCGG+TGG + chr8.2:15438765-15438784 None:intergenic 55.0%
GACGGCTGTCTATACCTCGA+CGG + chr8.2:15439079-15439098 None:intergenic 55.0%
GATCTCTTCATCTTCCCCGC+CGG + chr8.2:15438962-15438981 None:intergenic 55.0%
GCCACCAAGACCTGCAAACT+TGG + chr8.2:15439684-15439703 None:intergenic 55.0%
GTTGGAGAAGAGATCGGAGC+TGG + chr8.2:15438438-15438457 None:intergenic 55.0%
GTTGGAGAAGAGGAGAACGG+TGG + chr8.2:15438391-15438410 None:intergenic 55.0%
TCTCCGGGGAGAAGATTGTC+CGG - chr8.2:15439151-15439170 MS.gene060473:intron 55.0%
TGACAGAAGGAAGAGGGGTG+TGG + chr8.2:15438592-15438611 None:intergenic 55.0%
TGAGAGAGATCCATCTCCGG+CGG - chr8.2:15438943-15438962 MS.gene060473:intron 55.0%
TGCTCGAGAGGACAATCGGA+AGG - chr8.2:15439027-15439046 MS.gene060473:intron 55.0%
TTGTGCGGTGGTTGTGTTGG+TGG + chr8.2:15438753-15438772 None:intergenic 55.0%
!! GCTCTTCTAGGATTCGGCGA+AGG + chr8.2:15439124-15439143 None:intergenic 55.0%
AAGAGGAGAACGGTGGTCGC+CGG + chr8.2:15438384-15438403 None:intergenic 60.0%
AGAGAGATCCATCTCCGGCG+GGG - chr8.2:15438945-15438964 MS.gene060473:intron 60.0%
CCACCGGACAATCTTCTCCC+CGG + chr8.2:15439157-15439176 None:intergenic 60.0%
CGTGGGGAGAGGACGAATGT+TGG + chr8.2:15438615-15438634 None:intergenic 60.0%
GAGAGAGATCCATCTCCGGC+GGG - chr8.2:15438944-15438963 MS.gene060473:intron 60.0%
GCAATGGAGCCACCATCCAG+AGG + chr8.2:15440808-15440827 None:intergenic 60.0%
TAGACAGCCGTCTCCGACGA+CGG - chr8.2:15439087-15439106 MS.gene060473:intron 60.0%
TTCATCTTCCCCGCCGGAGA+TGG + chr8.2:15438956-15438975 None:intergenic 60.0%
TTCCTTGCCGTCGTCGGAGA+CGG + chr8.2:15439097-15439116 None:intergenic 60.0%
CCGGGGAGAAGATTGTCCGG+TGG - chr8.2:15439154-15439173 MS.gene060473:intron 65.0%
GGCTGCTTCCTTGCCGTCGT+CGG + chr8.2:15439103-15439122 None:intergenic 65.0%
GGTTCCGGCGTTCCGACGAA+GGG + chr8.2:15438644-15438663 None:intergenic 65.0%
GTCGCCGGTGACACGTGTGT+CGG + chr8.2:15438369-15438388 None:intergenic 65.0%
GTTCCGGCGTTCCGACGAAG+GGG + chr8.2:15438643-15438662 None:intergenic 65.0%
TGGTTCCGGCGTTCCGACGA+AGG + chr8.2:15438645-15438664 None:intergenic 65.0%
AGCCGTCTCCGACGACGGCA+AGG - chr8.2:15439092-15439111 MS.gene060473:intron 70.0%
CCACCCCTTCGTCGGAACGC+CGG - chr8.2:15438637-15438656 MS.gene060473:CDS 70.0%
CTGGATCGGCGAAGACCGCG+AGG - chr8.2:15439260-15439279 MS.gene060473:intron 70.0%
AAGGGGTGGCGCGTGGGGAG+AGG + chr8.2:15438626-15438645 None:intergenic 75.0%
CCCACGCGCCACCCCTTCGT+CGG - chr8.2:15438629-15438648 MS.gene060473:CDS 75.0%
CCGACGAAGGGGTGGCGCGT+GGG + chr8.2:15438632-15438651 None:intergenic 75.0%
CCGGCGTTCCGACGAAGGGG+TGG + chr8.2:15438640-15438659 None:intergenic 75.0%
CGACGAAGGGGTGGCGCGTG+GGG + chr8.2:15438631-15438650 None:intergenic 75.0%
TCCGACGAAGGGGTGGCGCG+TGG + chr8.2:15438633-15438652 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 15438314 15440999 15438314 ID=MS.gene060473
chr8.2 mRNA 15438314 15440999 15438314 ID=MS.gene060473.t1;Parent=MS.gene060473
chr8.2 exon 15439935 15440999 15439935 ID=MS.gene060473.t1.exon1;Parent=MS.gene060473.t1
chr8.2 CDS 15439935 15440999 15439935 ID=cds.MS.gene060473.t1;Parent=MS.gene060473.t1
chr8.2 exon 15439529 15439753 15439529 ID=MS.gene060473.t1.exon2;Parent=MS.gene060473.t1
chr8.2 CDS 15439529 15439753 15439529 ID=cds.MS.gene060473.t1;Parent=MS.gene060473.t1
chr8.2 exon 15439163 15439254 15439163 ID=MS.gene060473.t1.exon3;Parent=MS.gene060473.t1
chr8.2 CDS 15439163 15439254 15439163 ID=cds.MS.gene060473.t1;Parent=MS.gene060473.t1
chr8.2 exon 15438314 15438950 15438314 ID=MS.gene060473.t1.exon4;Parent=MS.gene060473.t1
chr8.2 CDS 15438314 15438950 15438314 ID=cds.MS.gene060473.t1;Parent=MS.gene060473.t1
Gene Sequence

>MS.gene060473

ATGGCTTCACTAACACCAGGCCTAATCCTTAAACTCCTACAAGCAATGAACACCGACACACGTGTCACCGGCGACCACCGTTCTCCTCTTCTCCAACTCATCGGAATTGTACCCGCTTTATCCAGCTCCGATCTCTTCTCCAACGAAGGCTTCTTTCTCAACCTCTCTGATTCTCTCAACTCCACCTACGTTCTTCTCTCTCACCCTGACACCGATCTCATTCTCAATAATCGTCTTCAATTAGGCCAGTTCCTCTACGTTGATCGCTTTCATTTCCACACCCCTCTTCCTTCTGTCACCAACATTCGTCCTCTCCCCACGCGCCACCCCTTCGTCGGAACGCCGGAACCACTCGTAGCTCGTATTTCACCTACCACTCGTCATTTCACCATTCAACCATTATCAGATTCCGATGATCCTCTTTCTTTGTATCTCTCCACCAACACAACCACCGCACAATCTCCCATTCAGATCAATCAACAACAACAACAGCAGCAGAAGAAGATGAACAATGTTCATTCACGGCAACCACTTGCTCCACGAGATAATTTACCAACGCCGAAGAGATTTTCATCTCCGGCGACTGCTAAACGATCACAATCTGCAGGGAAGTTTGGTAAAGTTTCTGCTGAGAGAGATCCATCTCCGGCGGGGAAGATGAAGAGATCTTCTTCACCAGTACCGTCCAAATGTGTGGTTCCGAGTTTGGTTTCTGCTCGAGAGGACAATCGGAAGGTTTCACGGGAAGCCGCAATTATTGTTCCGTCGAGGTATAGACAGCCGTCTCCGACGACGGCAAGGAAGCAGCCTTCGCCGAATCCTAGAAGAGCTTCCATTTCTCCGGGGAGAAGATTGTCCGGTGGAATCAAGTTTTCGCCGGCTGTTGGAGATTCTACTGCGAAGAAGAAGATGGTAGCTGGGATTTCTAAGATTTCTGATATGTTGGCTGGATCGGCGAAGACCGCGAGGAAGAATTGGGATGAACAAAATGTTGAAGGTGAACCTAAAGAAAAGAGTGTTGGGTCTAAAACTAGGGTTGATTCTCAATCAATTTTGAGAACTCAGGTAAATAAACATCAAATTTAAATGCTATTTTTTTTTTTTTTTTATATAGGGCATGAATTAATTAATGAATGCTTAATTGGAAATTCAAATCAGAAATTATGAATTTAGATTGAGCTAAGAATGGAAAGTTTCAGCATATTTAGTGTGATTTGTATTGAAATGATGCTGATTTTTTTGGCAGGTTTCAATGACAAGGAGATTGAGTGATGTGAAAAGCCGAAAATCAGATGACAATGATTCTTCTTCTATAGATGAGAATACTATAGACTCTTCTCCTCAAAGTTGTTTGGAGGTAGAGAAATCCAAGTTTGCAGGTCTTGGTGGCATTACAATTCATGAAAAGAAATGGACTGATGGAAGTGTTCCTCTTGATGCTGTGTCTGGCAAACTTTCAAGGCTTGGAAAGGTATTAATTTTGGAAATTTAACATTCATTTCTAGTGGTCTTATAATATGGAAATCATGCATAAGTATATAAACAGATTGTGCCACCACTAAAAAATGCAGTGAATACAAAAATGCAGTATGATTGAGTGTTTATGCATTAGAAATGATAGGTTTGTAGATGATAGGCTGGCTGGTTTCTTATAACCTTGAATTGACCATTATTTTGGTGATTTGGCTCTATTTGATTAGAAGGCAAATTTGATTAAATTGGTTTTTATTGTGAACTGAATCCAGGATGCAATGGAAAGGAAAGCTCTTGCTTCTGCAGCTGCTGCTGCAGCATTAGAAGAGGCCAATGCTACTGAATGTATAATAAGAAATTTAAGGTAACGATTTCATTTGACCTGGTTTTTAACATTGGAACTGAGTCTTTTATATACCAAAGTTAAGTCCATTGGCATTGTTTTCATTTTATTTAAACTTCAACTGAATGATCCATTTACTATTCAAGGGTTTAAAATTCATAACTTGTTTACTTCCTCTTTAATGGCTGACATGTATTTTACTTATTTTTTAATGTTCTTTCTGCCTGCTTCAGCATGTTTTCAGACCTTTGCTCTGTGTGTAAAGCCAAAAATCCTTTGCCAACCATAGACAAGTTTTTTACCATCTATGATGATGTCCTAAGATCAATCGCACTGGCTGAATCTGTTGCTAATAGTCACGATAACAGTATTCCAACATGTCAATCAAAGTCCATCTCTCTTTGGGTTGAAGCTGCTTTGGCCACTGATCTTCAGATAGTATCCCTTCTTACTGAAAATGACATAGATACTCCATCAGAACTTCAGAAAAGGCTGTCAAGACCACACTCTCTTAGCACATCTAAGAGTCAAGGAAATGGAATGAAAGAAACACTGGAGCTTGGAACAAGTTTACTGTCAGAAATGCAAATGTGGTTTCTACGCTTTGTTGAAGAATCCCTTGAAGCAGGATTTAAAGTGTTTGGAGAGAGTGCTAGTGGTGGGAAGAAAGCATTGCCTCTGGATGGTGGCTCCATTGCTATTGTTTTGTCACATTTGAAGCGAGTAAATGCATGGTTGGACCGCGTGGTTTCTAAAGGGAATCACTCATTGACAGATAAGATTGAGAAATTAAAGAGAAAAATCTATGGTTTTGTTATCCAGCATGTAGGATCAACTTTTGATAACAAAGCTTCCCCTGCTTCATCCTGA

Protein sequence

>MS.gene060473.t1

MASLTPGLILKLLQAMNTDTRVTGDHRSPLLQLIGIVPALSSSDLFSNEGFFLNLSDSLNSTYVLLSHPDTDLILNNRLQLGQFLYVDRFHFHTPLPSVTNIRPLPTRHPFVGTPEPLVARISPTTRHFTIQPLSDSDDPLSLYLSTNTTTAQSPIQINQQQQQQQKKMNNVHSRQPLAPRDNLPTPKRFSSPATAKRSQSAGKFGKVSAERDPSPAGKMKRSSSPVPSKCVVPSLVSAREDNRKVSREAAIIVPSRYRQPSPTTARKQPSPNPRRASISPGRRLSGGIKFSPAVGDSTAKKKMVAGISKISDMLAGSAKTARKNWDEQNVEGEPKEKSVGSKTRVDSQSILRTQVSMTRRLSDVKSRKSDDNDSSSIDENTIDSSPQSCLEVEKSKFAGLGGITIHEKKWTDGSVPLDAVSGKLSRLGKDAMERKALASAAAAAALEEANATECIIRNLSMFSDLCSVCKAKNPLPTIDKFFTIYDDVLRSIALAESVANSHDNSIPTCQSKSISLWVEAALATDLQIVSLLTENDIDTPSELQKRLSRPHSLSTSKSQGNGMKETLELGTSLLSEMQMWFLRFVEESLEAGFKVFGESASGGKKALPLDGGSIAIVLSHLKRVNAWLDRVVSKGNHSLTDKIEKLKRKIYGFVIQHVGSTFDNKASPASS