Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20730.t1 | XP_003591544.1 | 97.5 | 316 | 8 | 0 | 1 | 316 | 1 | 316 | 1.40E-177 | 632.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20730.t1 | Q9SRX9 | 65.1 | 335 | 98 | 4 | 1 | 316 | 1 | 335 | 2.1e-121 | 436.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20730.t1 | G7IF76 | 97.5 | 316 | 8 | 0 | 1 | 316 | 1 | 316 | 1.0e-177 | 632.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057148 | MS.gene20730 | -0.801744 | 7.79E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene20730 | -0.802882 | 4.54E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20730.t1 | MTR_1g088660 | 97.468 | 316 | 8 | 0 | 1 | 316 | 1 | 316 | 0.0 | 641 |
| MS.gene20730.t1 | MTR_7g108840 | 81.962 | 316 | 57 | 0 | 1 | 316 | 1 | 316 | 0.0 | 529 |
| MS.gene20730.t1 | MTR_8g058603 | 81.962 | 316 | 57 | 0 | 1 | 316 | 1 | 316 | 0.0 | 529 |
| MS.gene20730.t1 | MTR_1g088660 | 97.244 | 254 | 7 | 0 | 63 | 316 | 1 | 254 | 0.0 | 513 |
| MS.gene20730.t1 | MTR_7g107060 | 41.945 | 329 | 176 | 4 | 1 | 316 | 1 | 327 | 9.85e-88 | 266 |
| MS.gene20730.t1 | MTR_8g058547 | 80.303 | 132 | 26 | 0 | 1 | 132 | 1 | 132 | 3.32e-66 | 204 |
| MS.gene20730.t1 | MTR_8g058625 | 81.132 | 53 | 10 | 0 | 264 | 316 | 51 | 103 | 3.68e-26 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20730.t1 | AT1G02860 | 65.075 | 335 | 98 | 4 | 1 | 316 | 1 | 335 | 9.79e-158 | 444 |
| MS.gene20730.t1 | AT1G02860 | 64.478 | 335 | 98 | 5 | 1 | 316 | 1 | 333 | 3.27e-154 | 435 |
| MS.gene20730.t1 | AT1G02860 | 62.553 | 235 | 69 | 4 | 1 | 216 | 1 | 235 | 2.77e-95 | 282 |
| MS.gene20730.t1 | AT2G38920 | 45.896 | 268 | 144 | 1 | 48 | 315 | 68 | 334 | 7.11e-80 | 246 |
| MS.gene20730.t1 | AT2G38920 | 45.896 | 268 | 144 | 1 | 48 | 315 | 68 | 334 | 7.11e-80 | 246 |
| MS.gene20730.t1 | AT2G38920 | 45.896 | 268 | 144 | 1 | 48 | 315 | 68 | 334 | 7.11e-80 | 246 |
| MS.gene20730.t1 | AT2G38920 | 46.269 | 268 | 142 | 2 | 48 | 315 | 68 | 333 | 5.76e-79 | 244 |
| MS.gene20730.t1 | AT2G38920 | 39.053 | 169 | 102 | 1 | 48 | 216 | 68 | 235 | 2.66e-35 | 128 |
| MS.gene20730.t1 | AT2G38920 | 36.875 | 160 | 100 | 1 | 48 | 207 | 68 | 226 | 9.31e-30 | 113 |
Find 64 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGATGCTGTCTCACATTTA+AGG | 0.203509 | 1.2:+66293806 | MS.gene20730:CDS |
| CTGGAACGACATCTTGCTTC+TGG | 0.289645 | 1.2:+66293394 | MS.gene20730:CDS |
| TGGCATTACATATCAATCTA+AGG | 0.297202 | 1.2:+66293742 | MS.gene20730:CDS |
| GAATTTCCTTGTGCATAGTC+TGG | 0.333742 | 1.2:-66293692 | None:intergenic |
| ATTGAGAAGGGAAGGGAAAA+AGG | 0.353205 | 1.2:-66293323 | None:intergenic |
| TACTATTGTTGATGGGCTTA+AGG | 0.357492 | 1.2:+66294369 | MS.gene20730:CDS |
| CAATGAAATGTCAGAAATAG+TGG | 0.363110 | 1.2:+66293342 | MS.gene20730:CDS |
| TGGCCACAAGTCAGAGAAAC+TGG | 0.385626 | 1.2:-66294307 | None:intergenic |
| TTTACAGCTGCAAGGAGTAC+TGG | 0.387587 | 1.2:+66295436 | MS.gene20730:intron |
| TCAACATGAGAATGTACTTT+CGG | 0.395088 | 1.2:-66293420 | None:intergenic |
| GCATCTGTTACTATTGTTGA+TGG | 0.400772 | 1.2:+66294361 | MS.gene20730:CDS |
| TCTGACTTGCTCTATATGTT+TGG | 0.403804 | 1.2:+66293884 | MS.gene20730:CDS |
| TGTTGAAAGGAAAATCAAAA+AGG | 0.412750 | 1.2:+66293437 | MS.gene20730:CDS |
| AACGCAGTGTAGAGCGTTCA+TGG | 0.417759 | 1.2:+66295518 | MS.gene20730:CDS |
| GAAGTTCTGCAAGACCTATC+AGG | 0.420448 | 1.2:+66291305 | MS.gene20730:CDS |
| GACGTACATGGGCATTGATC+AGG | 0.450499 | 1.2:-66291435 | None:intergenic |
| AGCTTCTTGAATCCAACTAC+AGG | 0.454546 | 1.2:-66291360 | None:intergenic |
| TCAAGCAAGCAAAGGAGCAC+TGG | 0.456757 | 1.2:+66295493 | MS.gene20730:CDS |
| CAGAAGAAGCTCCCTGTAGT+TGG | 0.458661 | 1.2:+66291348 | MS.gene20730:CDS |
| CATCTGTTACTATTGTTGAT+GGG | 0.462476 | 1.2:+66294362 | MS.gene20730:CDS |
| AGGAAATTCTTCAGAGTCCC+TGG | 0.466281 | 1.2:+66293706 | MS.gene20730:CDS |
| TGCCATCAGCTCAATAAGCC+AGG | 0.477293 | 1.2:-66293724 | None:intergenic |
| TTATGAAGGTGCTGTACACT+TGG | 0.484901 | 1.2:+66295226 | MS.gene20730:CDS |
| GATCCAGTTTCTCTGACTTG+TGG | 0.486686 | 1.2:+66294304 | MS.gene20730:CDS |
| GACATTTCATTGAGAAGGGA+AGG | 0.489540 | 1.2:-66293331 | None:intergenic |
| TTTCTGACATTTCATTGAGA+AGG | 0.491436 | 1.2:-66293336 | None:intergenic |
| ATTGATCAGGACAAGGTTTG+TGG | 0.494079 | 1.2:-66291422 | None:intergenic |
| AATTTCCTTGTGCATAGTCT+GGG | 0.496401 | 1.2:-66293691 | None:intergenic |
| CATACTACTTTAATTCATGA+AGG | 0.511669 | 1.2:+66293463 | MS.gene20730:CDS |
| CAGATTCATTATTCTAAGCA+AGG | 0.514571 | 1.2:+66293648 | MS.gene20730:intron |
| TGACAGGCAGGAGTTTATGA+AGG | 0.519168 | 1.2:+66295212 | MS.gene20730:intron |
| TCAGGAATACATGCGAGCTC+AGG | 0.526255 | 1.2:+66291323 | MS.gene20730:CDS |
| AATACTAAAGAAATACGATA+AGG | 0.526973 | 1.2:+66293534 | MS.gene20730:CDS |
| TTCTGACATTTCATTGAGAA+GGG | 0.527417 | 1.2:-66293335 | None:intergenic |
| TTACAGCTGCAAGGAGTACT+GGG | 0.534094 | 1.2:+66295437 | MS.gene20730:intron |
| GGCATTACATATCAATCTAA+GGG | 0.535814 | 1.2:+66293743 | MS.gene20730:CDS |
| TCCCTGGCTTATTGAGCTGA+TGG | 0.545974 | 1.2:+66293722 | MS.gene20730:CDS |
| CTGGGAGGAAAGACTTCAGA+TGG | 0.554408 | 1.2:+66295455 | MS.gene20730:CDS |
| TCAGCGTGCACAGAAACTGC+TGG | 0.555825 | 1.2:+66293375 | MS.gene20730:CDS |
| CACAACTGTAGCAGAATATG+TGG | 0.556209 | 1.2:-66294327 | None:intergenic |
| AAGGCAGCCACATTATTCAA+TGG | 0.560158 | 1.2:+66293786 | MS.gene20730:CDS |
| AGCTCGCATGTATTCCTGAT+AGG | 0.561249 | 1.2:-66291319 | None:intergenic |
| CAAGCAAGCAAAGGAGCACT+GGG | 0.568388 | 1.2:+66295494 | MS.gene20730:CDS |
| TCAATATGTTTACAGCTGCA+AGG | 0.570008 | 1.2:+66295428 | MS.gene20730:intron |
| TGCTGTCTCACATTTAAGGA+TGG | 0.573316 | 1.2:+66293810 | MS.gene20730:CDS |
| TCAGATGGAAAGAGTAGAGA+GGG | 0.577968 | 1.2:+66295470 | MS.gene20730:CDS |
| AAGTACATTCTCATGTTGAA+AGG | 0.578077 | 1.2:+66293424 | MS.gene20730:CDS |
| GGGAAACTAAAGACAAGTCA+AGG | 0.583655 | 1.2:+66293763 | MS.gene20730:CDS |
| AATGAAATGTCAGAAATAGT+GGG | 0.585835 | 1.2:+66293343 | MS.gene20730:CDS |
| ACGCAGTGTAGAGCGTTCAT+GGG | 0.593633 | 1.2:+66295519 | MS.gene20730:CDS |
| AGATTCATTATTCTAAGCAA+GGG | 0.597130 | 1.2:+66293649 | MS.gene20730:intron |
| GCCATCAGCTCAATAAGCCA+GGG | 0.598446 | 1.2:-66293723 | None:intergenic |
| CATGGGCATTGATCAGGACA+AGG | 0.604815 | 1.2:-66291429 | None:intergenic |
| AGAGAGGGTCAAGCAAGCAA+AGG | 0.606390 | 1.2:+66295485 | MS.gene20730:CDS |
| TAGCTTACCTCTCGGCACAT+AGG | 0.606824 | 1.2:-66294415 | None:intergenic |
| ACATTTCATTGAGAAGGGAA+GGG | 0.609739 | 1.2:-66293330 | None:intergenic |
| AAGAGCTCACAAGCAAGTGA+TGG | 0.610123 | 1.2:-66293837 | None:intergenic |
| AACTAAAGACAAGTCAAGGA+AGG | 0.614374 | 1.2:+66293767 | MS.gene20730:CDS |
| TTCAGATGGAAAGAGTAGAG+AGG | 0.639549 | 1.2:+66295469 | MS.gene20730:CDS |
| GCTTCTTGAATCCAACTACA+GGG | 0.643810 | 1.2:-66291359 | None:intergenic |
| ACAGCATCCATTGAATAATG+TGG | 0.684537 | 1.2:-66293793 | None:intergenic |
| ACAAGCCCAGACTATGCACA+AGG | 0.690000 | 1.2:+66293686 | MS.gene20730:CDS |
| AAAATGTCCTATGTGCCGAG+AGG | 0.727589 | 1.2:+66294408 | MS.gene20730:CDS |
| CAGCTGCAAGGAGTACTGGG+AGG | 0.743316 | 1.2:+66295440 | MS.gene20730:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATTATTATCAATTTTG+TGG | + | chr1.2:66291829-66291848 | MS.gene20730:intron | 10.0% |
| !!! | TTAATTATTATCAATTTTGT+GGG | + | chr1.2:66291830-66291849 | MS.gene20730:intron | 10.0% |
| !! | AAAATAATTAATCGAAATGA+TGG | - | chr1.2:66291468-66291487 | None:intergenic | 15.0% |
| !! | AAATAATTAATCGAAATGAT+GGG | - | chr1.2:66291467-66291486 | None:intergenic | 15.0% |
| !! | ATTGAATTAAAATAAAGAGA+TGG | + | chr1.2:66295308-66295327 | MS.gene20730:intron | 15.0% |
| !! | GTAAACATATTGAAATTATA+AGG | - | chr1.2:66295421-66295440 | None:intergenic | 15.0% |
| !! | TCAAACATTTGAAAATAATT+TGG | - | chr1.2:66291533-66291552 | None:intergenic | 15.0% |
| !!! | TAATTATTATCAATTTTGTG+GGG | + | chr1.2:66291831-66291850 | MS.gene20730:intron | 15.0% |
| !!! | TTCAATTGATAATTTTAATC+TGG | + | chr1.2:66294255-66294274 | MS.gene20730:intron | 15.0% |
| !! | AAAAGAAAAGAAAAAAGTGA+AGG | - | chr1.2:66294235-66294254 | None:intergenic | 20.0% |
| !! | AAGATAGTAGTATTAATTAG+GGG | + | chr1.2:66295035-66295054 | MS.gene20730:intron | 20.0% |
| !! | AATACTAAAGAAATACGATA+AGG | + | chr1.2:66293534-66293553 | MS.gene20730:CDS | 20.0% |
| !! | ACAAGATAGTAGTATTAATT+AGG | + | chr1.2:66295033-66295052 | MS.gene20730:intron | 20.0% |
| !! | ATATAATTATGGTGTGAAAT+TGG | + | chr1.2:66292456-66292475 | MS.gene20730:intron | 20.0% |
| !! | CAAGATAGTAGTATTAATTA+GGG | + | chr1.2:66295034-66295053 | MS.gene20730:intron | 20.0% |
| !! | GATGAATAAAAATTGAATGA+AGG | - | chr1.2:66291602-66291621 | None:intergenic | 20.0% |
| !! | TAATTAATTATATGTCCTTC+AGG | - | chr1.2:66291817-66291836 | None:intergenic | 20.0% |
| !! | TAGGAGTTTCATTAATATTA+AGG | - | chr1.2:66291721-66291740 | None:intergenic | 20.0% |
| !! | TATAAGAATTAAGAGTTTGT+AGG | + | chr1.2:66293147-66293166 | MS.gene20730:intron | 20.0% |
| !! | TTTCAATGGTAAAAATTAAC+AGG | - | chr1.2:66294651-66294670 | None:intergenic | 20.0% |
| !! | TTTCACTATAAATAAAGACT+GGG | + | chr1.2:66294822-66294841 | MS.gene20730:intron | 20.0% |
| !! | TTTCTTAAGAAATGTGAAAA+AGG | - | chr1.2:66294916-66294935 | None:intergenic | 20.0% |
| !!! | AATTTTATACTGTTTATGAC+AGG | + | chr1.2:66295196-66295215 | MS.gene20730:intron | 20.0% |
| !!! | ATAATGATGTCATTTTCTTT+GGG | + | chr1.2:66293201-66293220 | MS.gene20730:intron | 20.0% |
| !!! | CTCAAATTAGTCATTTTTAT+TGG | + | chr1.2:66291772-66291791 | MS.gene20730:intron | 20.0% |
| !!! | GAAGAATTGAATATTTTGTT+AGG | + | chr1.2:66295248-66295267 | MS.gene20730:CDS | 20.0% |
| !!! | GATATTTCAATTGTATTGAT+TGG | + | chr1.2:66292911-66292930 | MS.gene20730:intron | 20.0% |
| !!! | GTCTTTATTTATAGTGAAAA+AGG | - | chr1.2:66294821-66294840 | None:intergenic | 20.0% |
| !!! | TATAATGATGTCATTTTCTT+TGG | + | chr1.2:66293200-66293219 | MS.gene20730:intron | 20.0% |
| !!! | TGAATATTTTGTTAGGAAAA+AGG | + | chr1.2:66295255-66295274 | MS.gene20730:CDS | 20.0% |
| !!! | TGAGTAAATATAGTTTTTTG+TGG | - | chr1.2:66294060-66294079 | None:intergenic | 20.0% |
| !!! | TTAATTTTGAGAGTTCATTT+AGG | - | chr1.2:66291740-66291759 | None:intergenic | 20.0% |
| !!! | TTTTCACTATAAATAAAGAC+TGG | + | chr1.2:66294821-66294840 | MS.gene20730:intron | 20.0% |
| ! | AAGAAGATCTTAAGTTTCAA+TGG | - | chr1.2:66294665-66294684 | None:intergenic | 25.0% |
| ! | AATATAACACCACAATTAAG+AGG | - | chr1.2:66295365-66295384 | None:intergenic | 25.0% |
| ! | AATGAAATGTCAGAAATAGT+GGG | + | chr1.2:66293343-66293362 | MS.gene20730:CDS | 25.0% |
| ! | AATTATAAGGTTAAGACACT+TGG | - | chr1.2:66295408-66295427 | None:intergenic | 25.0% |
| ! | AGAAGTTATTGATGTAAGAA+TGG | - | chr1.2:66294474-66294493 | None:intergenic | 25.0% |
| ! | AGATTCATTATTCTAAGCAA+GGG | + | chr1.2:66293649-66293668 | MS.gene20730:intron | 25.0% |
| ! | ATAACAAATTGATGAAGTGT+TGG | - | chr1.2:66292145-66292164 | None:intergenic | 25.0% |
| ! | ATAGGTAATGCTTAATGAAA+AGG | + | chr1.2:66292810-66292829 | MS.gene20730:intron | 25.0% |
| ! | ATAGTTTCAAATATGTGACA+TGG | + | chr1.2:66294096-66294115 | MS.gene20730:intron | 25.0% |
| ! | ATGCATCTAGTAATTTGAAA+AGG | + | chr1.2:66295081-66295100 | MS.gene20730:intron | 25.0% |
| ! | CATACTACTTTAATTCATGA+AGG | + | chr1.2:66293463-66293482 | MS.gene20730:CDS | 25.0% |
| ! | CTTGTTTAAGAATATGAGAA+TGG | + | chr1.2:66292032-66292051 | MS.gene20730:intron | 25.0% |
| ! | GGAAAATATTGAACAACATA+AGG | - | chr1.2:66294145-66294164 | None:intergenic | 25.0% |
| ! | GGACAAAAATAAACTCAAAT+GGG | + | chr1.2:66295117-66295136 | MS.gene20730:intron | 25.0% |
| ! | TAGGTAATGCTTAATGAAAA+GGG | + | chr1.2:66292811-66292830 | MS.gene20730:intron | 25.0% |
| ! | TGCATCTAGTAATTTGAAAA+GGG | + | chr1.2:66295082-66295101 | MS.gene20730:intron | 25.0% |
| ! | TGGTGGAAAACATATAATTA+TGG | + | chr1.2:66292445-66292464 | MS.gene20730:intron | 25.0% |
| ! | TGTTGAAAGGAAAATCAAAA+AGG | + | chr1.2:66293437-66293456 | MS.gene20730:CDS | 25.0% |
| ! | TTCACTATAAATAAAGACTG+GGG | + | chr1.2:66294823-66294842 | MS.gene20730:intron | 25.0% |
| ! | TTCTTATAATAGACTACAAG+CGG | - | chr1.2:66293135-66293154 | None:intergenic | 25.0% |
| ! | TTGTATTGAAATTGTAAACC+AGG | + | chr1.2:66294019-66294038 | MS.gene20730:intron | 25.0% |
| ! | TTTAATGCACATACAAACAA+AGG | - | chr1.2:66294992-66295011 | None:intergenic | 25.0% |
| !! | AGAAAAGTATACTGATAATG+TGG | - | chr1.2:66294186-66294205 | None:intergenic | 25.0% |
| !! | CAGATCAATATCAATTTTGA+TGG | - | chr1.2:66293868-66293887 | None:intergenic | 25.0% |
| !! | TAATTTTGTATGCTTGTGTA+TGG | + | chr1.2:66292362-66292381 | MS.gene20730:intron | 25.0% |
| !! | TATTAATTAGGGGTATGTTT+AGG | + | chr1.2:66295045-66295064 | MS.gene20730:intron | 25.0% |
| !! | TCAATATTTTCCTAACCAAT+TGG | + | chr1.2:66294153-66294172 | MS.gene20730:intron | 25.0% |
| !! | TTTCTTTTGCATGCTAATTT+TGG | + | chr1.2:66293575-66293594 | MS.gene20730:intron | 25.0% |
| !!! | AGAATTGTTTTTGAAGGAAT+TGG | + | chr1.2:66292860-66292879 | MS.gene20730:intron | 25.0% |
| !!! | CAGAACTGTTTACTTATTTT+AGG | + | chr1.2:66294759-66294778 | MS.gene20730:intron | 25.0% |
| !!! | CTCTCATTAGTCATTTTTAT+TGG | + | chr1.2:66291621-66291640 | MS.gene20730:intron | 25.0% |
| !!! | GAATTGTTTTTGAAGGAATT+GGG | + | chr1.2:66292861-66292880 | MS.gene20730:intron | 25.0% |
| !!! | TTCAATTGTATTGATTGGAT+TGG | + | chr1.2:66292916-66292935 | MS.gene20730:intron | 25.0% |
| AAATTAACAGGCCTTAACAA+AGG | - | chr1.2:66294639-66294658 | None:intergenic | 30.0% | |
| AAGAAATGTGAAAAAGGCAA+TGG | - | chr1.2:66294910-66294929 | None:intergenic | 30.0% | |
| AAGTACATTCTCATGTTGAA+AGG | + | chr1.2:66293424-66293443 | MS.gene20730:CDS | 30.0% | |
| ACATATTAAACTGCTCACTA+AGG | - | chr1.2:66291867-66291886 | None:intergenic | 30.0% | |
| ACTTCACTAATTAACTCTGA+TGG | - | chr1.2:66293012-66293031 | None:intergenic | 30.0% | |
| ACTTCAGAAGAAAATGGTAT+AGG | + | chr1.2:66292792-66292811 | MS.gene20730:intron | 30.0% | |
| AGAAATGTGAAAAAGGCAAT+GGG | - | chr1.2:66294909-66294928 | None:intergenic | 30.0% | |
| AGAAGCTAAACAATTACAGA+AGG | - | chr1.2:66294704-66294723 | None:intergenic | 30.0% | |
| ATATATTCACGATCCAATTC+AGG | + | chr1.2:66291574-66291593 | MS.gene20730:intron | 30.0% | |
| ATCAGAACTTCAGAAGAAAA+TGG | + | chr1.2:66292786-66292805 | MS.gene20730:intron | 30.0% | |
| ATGGTAAGATTAAGGGATTT+GGG | + | chr1.2:66292483-66292502 | MS.gene20730:intron | 30.0% | |
| CAATGAAATGTCAGAAATAG+TGG | + | chr1.2:66293342-66293361 | MS.gene20730:CDS | 30.0% | |
| CAGATTCATTATTCTAAGCA+AGG | + | chr1.2:66293648-66293667 | MS.gene20730:intron | 30.0% | |
| CATCTGTTACTATTGTTGAT+GGG | + | chr1.2:66294362-66294381 | MS.gene20730:CDS | 30.0% | |
| GAAGCTAAACAATTACAGAA+GGG | - | chr1.2:66294703-66294722 | None:intergenic | 30.0% | |
| GCATCTAGTAATTTGAAAAG+GGG | + | chr1.2:66295083-66295102 | MS.gene20730:intron | 30.0% | |
| GCTGAATAAGTATAATTGAG+CGG | + | chr1.2:66294791-66294810 | MS.gene20730:intron | 30.0% | |
| GGCATTACATATCAATCTAA+GGG | + | chr1.2:66293743-66293762 | MS.gene20730:CDS | 30.0% | |
| GGGACAAAAATAAACTCAAA+TGG | + | chr1.2:66295116-66295135 | MS.gene20730:intron | 30.0% | |
| TATGGAAAATTTGCCAAGTA+AGG | + | chr1.2:66292380-66292399 | MS.gene20730:intron | 30.0% | |
| TATGTTATTCACTAGTACTG+TGG | + | chr1.2:66291882-66291901 | MS.gene20730:intron | 30.0% | |
| TCAACATGAGAATGTACTTT+CGG | - | chr1.2:66293423-66293442 | None:intergenic | 30.0% | |
| TGAAAAGGGGTTTACATTTA+GGG | + | chr1.2:66295096-66295115 | MS.gene20730:intron | 30.0% | |
| TGGCATTACATATCAATCTA+AGG | + | chr1.2:66293742-66293761 | MS.gene20730:CDS | 30.0% | |
| TGGTTAGATGGTAAGATTAA+GGG | + | chr1.2:66292476-66292495 | MS.gene20730:intron | 30.0% | |
| TTCTGACATTTCATTGAGAA+GGG | - | chr1.2:66293338-66293357 | None:intergenic | 30.0% | |
| TTGAAAAGGGGTTTACATTT+AGG | + | chr1.2:66295095-66295114 | MS.gene20730:intron | 30.0% | |
| TTGGTTAGATGGTAAGATTA+AGG | + | chr1.2:66292475-66292494 | MS.gene20730:intron | 30.0% | |
| TTTCTGACATTTCATTGAGA+AGG | - | chr1.2:66293339-66293358 | None:intergenic | 30.0% | |
| ! | ATTACACTATGTTAGCTTAG+AGG | - | chr1.2:66293279-66293298 | None:intergenic | 30.0% |
| ! | ATTTTCTTTGGGTACAGATT+GGG | + | chr1.2:66293212-66293231 | MS.gene20730:intron | 30.0% |
| ! | TAGTCTTAAATTTGTCCTGA+AGG | + | chr1.2:66291799-66291818 | MS.gene20730:intron | 30.0% |
| ! | TATTATCAATTTTGTGGGGA+GGG | + | chr1.2:66291835-66291854 | MS.gene20730:intron | 30.0% |
| ! | TATTTTATTCAGTGTGCGAT+GGG | + | chr1.2:66293299-66293318 | MS.gene20730:intron | 30.0% |
| ! | TTATTATCAATTTTGTGGGG+AGG | + | chr1.2:66291834-66291853 | MS.gene20730:intron | 30.0% |
| ! | TTCTGTAATTGTTTAGCTTC+TGG | + | chr1.2:66294703-66294722 | MS.gene20730:intron | 30.0% |
| ! | TTTGTACATGACTCTCATTT+TGG | + | chr1.2:66293946-66293965 | MS.gene20730:intron | 30.0% |
| ! | TTTTGTGGAACCATAAAACA+AGG | - | chr1.2:66294045-66294064 | None:intergenic | 30.0% |
| !! | ACTGTTAAGTGCTATTTAGA+CGG | + | chr1.2:66292888-66292907 | MS.gene20730:intron | 30.0% |
| !! | ATTAATCGAAATGATGGGTT+CGG | - | chr1.2:66291462-66291481 | None:intergenic | 30.0% |
| !! | ATTGGTTTGATAAACATGCA+TGG | + | chr1.2:66292763-66292782 | MS.gene20730:intron | 30.0% |
| !! | ATTGTAGAATTTGTTGCACA+AGG | + | chr1.2:66292972-66292991 | MS.gene20730:intron | 30.0% |
| !! | CAATTTGTTATTCTTTGCTC+AGG | + | chr1.2:66292154-66292173 | MS.gene20730:intron | 30.0% |
| !! | TTATTTTATTCAGTGTGCGA+TGG | + | chr1.2:66293298-66293317 | MS.gene20730:intron | 30.0% |
| !!! | AGCAGAAGAATTGTTTTTGA+AGG | + | chr1.2:66292854-66292873 | MS.gene20730:intron | 30.0% |
| !!! | ATGGTTGTTTTAAAATGGCT+GGG | + | chr1.2:66292244-66292263 | MS.gene20730:intron | 30.0% |
| !!! | TGTCGATGGTTGTTTTAAAA+TGG | + | chr1.2:66292239-66292258 | MS.gene20730:intron | 30.0% |
| AAAATTTGCCAAGTAAGGCA+TGG | + | chr1.2:66292385-66292404 | MS.gene20730:intron | 35.0% | |
| AAATGATCGCTGCTGTTATT+TGG | - | chr1.2:66292286-66292305 | None:intergenic | 35.0% | |
| AACTAAAGACAAGTCAAGGA+AGG | + | chr1.2:66293767-66293786 | MS.gene20730:CDS | 35.0% | |
| AATTTAGTCACTGAAGCTGA+AGG | - | chr1.2:66293106-66293125 | None:intergenic | 35.0% | |
| AATTTCCTTGTGCATAGTCT+GGG | - | chr1.2:66293694-66293713 | None:intergenic | 35.0% | |
| ACAGCATCCATTGAATAATG+TGG | - | chr1.2:66293796-66293815 | None:intergenic | 35.0% | |
| ACATTTCATTGAGAAGGGAA+GGG | - | chr1.2:66293333-66293352 | None:intergenic | 35.0% | |
| AGAAAATAGTAGCAGGGATT+TGG | + | chr1.2:66292554-66292573 | MS.gene20730:intron | 35.0% | |
| ATGGTGTGAAATTGGTTAGA+TGG | + | chr1.2:66292464-66292483 | MS.gene20730:intron | 35.0% | |
| ATTTAGTCACTGAAGCTGAA+GGG | - | chr1.2:66293105-66293124 | None:intergenic | 35.0% | |
| CAAATGGGTGCTTAGATATA+GGG | + | chr1.2:66295132-66295151 | MS.gene20730:intron | 35.0% | |
| CAGTGAATTTGAAAACCACT+GGG | - | chr1.2:66292519-66292538 | None:intergenic | 35.0% | |
| GATCGAAAACAGACTCTAAA+TGG | - | chr1.2:66295343-66295362 | None:intergenic | 35.0% | |
| GATGGTAAGATTAAGGGATT+TGG | + | chr1.2:66292482-66292501 | MS.gene20730:intron | 35.0% | |
| GCATCTGTTACTATTGTTGA+TGG | + | chr1.2:66294361-66294380 | MS.gene20730:CDS | 35.0% | |
| GTTATGAAGCTATACCGTTA+AGG | + | chr1.2:66292641-66292660 | MS.gene20730:intron | 35.0% | |
| TAATGAGATCCTACTGCATA+TGG | - | chr1.2:66294441-66294460 | None:intergenic | 35.0% | |
| TCAAATGGGTGCTTAGATAT+AGG | + | chr1.2:66295131-66295150 | MS.gene20730:intron | 35.0% | |
| TCAATATGTTTACAGCTGCA+AGG | + | chr1.2:66295428-66295447 | MS.gene20730:intron | 35.0% | |
| TCACTAATTAACTCTGATGG+AGG | - | chr1.2:66293009-66293028 | None:intergenic | 35.0% | |
| TGAGTACTCGAAATTGTCAA+GGG | + | chr1.2:66292216-66292235 | MS.gene20730:intron | 35.0% | |
| TTATACTGTTTATGACAGGC+AGG | + | chr1.2:66295200-66295219 | MS.gene20730:intron | 35.0% | |
| TTGAACAACATAAGGAGATC+TGG | - | chr1.2:66294137-66294156 | None:intergenic | 35.0% | |
| TTGAATGAAGGAACCTGAAT+TGG | - | chr1.2:66291590-66291609 | None:intergenic | 35.0% | |
| TTGAGTACTCGAAATTGTCA+AGG | + | chr1.2:66292215-66292234 | MS.gene20730:intron | 35.0% | |
| TTTCTGCATAACAGTCATAC+TGG | + | chr1.2:66292594-66292613 | MS.gene20730:intron | 35.0% | |
| TTTGACACGTGATTCATGAT+TGG | + | chr1.2:66291650-66291669 | MS.gene20730:intron | 35.0% | |
| ! | AGAATATGAGAATGGACTTG+TGG | + | chr1.2:66292040-66292059 | MS.gene20730:intron | 35.0% |
| ! | ATTATCAATTTTGTGGGGAG+GGG | + | chr1.2:66291836-66291855 | MS.gene20730:intron | 35.0% |
| ! | CATTTTCTTTGGGTACAGAT+TGG | + | chr1.2:66293211-66293230 | MS.gene20730:intron | 35.0% |
| ! | GAGTGTTTTGTAATAAGAGG+AGG | + | chr1.2:66292410-66292429 | MS.gene20730:intron | 35.0% |
| ! | GTTGGTAAATGATAACCTCT+TGG | - | chr1.2:66292127-66292146 | None:intergenic | 35.0% |
| ! | GTTTTCGATCCTCTTAATTG+TGG | + | chr1.2:66295353-66295372 | MS.gene20730:intron | 35.0% |
| ! | TATGTTAGCTTAGAGGTAGT+GGG | - | chr1.2:66293272-66293291 | None:intergenic | 35.0% |
| ! | TGAGTGTTACTCGTCTTAAT+TGG | + | chr1.2:66292745-66292764 | MS.gene20730:intron | 35.0% |
| ! | TTTTCTTTGGGTACAGATTG+GGG | + | chr1.2:66293213-66293232 | MS.gene20730:intron | 35.0% |
| !! | ACTGGTATGCTTGATTTGTA+GGG | + | chr1.2:66292612-66292631 | MS.gene20730:intron | 35.0% |
| !! | CTGTTAAGTGCTATTTAGAC+GGG | + | chr1.2:66292889-66292908 | MS.gene20730:intron | 35.0% |
| !! | GTGAAAGTGTCTCTCTTATA+AGG | + | chr1.2:66294208-66294227 | MS.gene20730:intron | 35.0% |
| !! | GTGGAGTGTTTTGTAATAAG+AGG | + | chr1.2:66292407-66292426 | MS.gene20730:intron | 35.0% |
| !! | TACTATTGTTGATGGGCTTA+AGG | + | chr1.2:66294369-66294388 | MS.gene20730:CDS | 35.0% |
| !! | TACTGGTATGCTTGATTTGT+AGG | + | chr1.2:66292611-66292630 | MS.gene20730:intron | 35.0% |
| !! | TCTGACTTGCTCTATATGTT+TGG | + | chr1.2:66293884-66293903 | MS.gene20730:CDS | 35.0% |
| !! | TTTGTTATTCTTTGCTCAGG+AGG | + | chr1.2:66292157-66292176 | MS.gene20730:intron | 35.0% |
| !!! | GATGGTTGTTTTAAAATGGC+TGG | + | chr1.2:66292243-66292262 | MS.gene20730:intron | 35.0% |
| AAATAGTAGCAGGGATTTGG+TGG | + | chr1.2:66292557-66292576 | MS.gene20730:intron | 40.0% | |
| AAGGCAGCCACATTATTCAA+TGG | + | chr1.2:66293786-66293805 | MS.gene20730:CDS | 40.0% | |
| AATGTGAAAAAGGCAATGGG+TGG | - | chr1.2:66294906-66294925 | None:intergenic | 40.0% | |
| AATTTGCCCGACCTTTGTTA+AGG | + | chr1.2:66294625-66294644 | MS.gene20730:intron | 40.0% | |
| AGACTGGGGATGTTAAGAAT+TGG | + | chr1.2:66294837-66294856 | MS.gene20730:intron | 40.0% | |
| AGCTTCTTGAATCCAACTAC+AGG | - | chr1.2:66291363-66291382 | None:intergenic | 40.0% | |
| AGGCAGTGTATAAGGAGATA+TGG | + | chr1.2:66292100-66292119 | MS.gene20730:intron | 40.0% | |
| ATGTGTACAAGATGCATGGA+GGG | + | chr1.2:66291926-66291945 | MS.gene20730:intron | 40.0% | |
| ATTCACTAGTACTGTGGCAA+AGG | + | chr1.2:66291888-66291907 | MS.gene20730:intron | 40.0% | |
| ATTGAGAAGGGAAGGGAAAA+AGG | - | chr1.2:66293326-66293345 | None:intergenic | 40.0% | |
| ATTGATCAGGACAAGGTTTG+TGG | - | chr1.2:66291425-66291444 | None:intergenic | 40.0% | |
| CACAACTGTAGCAGAATATG+TGG | - | chr1.2:66294330-66294349 | None:intergenic | 40.0% | |
| GAATTTCCTTGTGCATAGTC+TGG | - | chr1.2:66293695-66293714 | None:intergenic | 40.0% | |
| GACATTTCATTGAGAAGGGA+AGG | - | chr1.2:66293334-66293353 | None:intergenic | 40.0% | |
| GATCATTTCACTCTGATTGC+AGG | + | chr1.2:66292298-66292317 | MS.gene20730:intron | 40.0% | |
| GCAGTGAATTTGAAAACCAC+TGG | - | chr1.2:66292520-66292539 | None:intergenic | 40.0% | |
| GCTTCTTGAATCCAACTACA+GGG | - | chr1.2:66291362-66291381 | None:intergenic | 40.0% | |
| GGCAGTGTATAAGGAGATAT+GGG | + | chr1.2:66292101-66292120 | MS.gene20730:intron | 40.0% | |
| GGCTTGAGAAAATAGTAGCA+GGG | + | chr1.2:66292548-66292567 | MS.gene20730:intron | 40.0% | |
| GGGAAACTAAAGACAAGTCA+AGG | + | chr1.2:66293763-66293782 | MS.gene20730:CDS | 40.0% | |
| TAACAGGCCTTAACAAAGGT+CGG | - | chr1.2:66294635-66294654 | None:intergenic | 40.0% | |
| TAATGTGGAACTGCACCAAT+TGG | - | chr1.2:66294171-66294190 | None:intergenic | 40.0% | |
| TACTTGTATGTGCCTGAGAA+TGG | + | chr1.2:66291973-66291992 | MS.gene20730:intron | 40.0% | |
| TCAAATTCACTGCTATGCCT+GGG | + | chr1.2:66292527-66292546 | MS.gene20730:intron | 40.0% | |
| TCAGATGGAAAGAGTAGAGA+GGG | + | chr1.2:66295470-66295489 | MS.gene20730:CDS | 40.0% | |
| TGCTGTCTCACATTTAAGGA+TGG | + | chr1.2:66293810-66293829 | MS.gene20730:CDS | 40.0% | |
| TGGATGCTGTCTCACATTTA+AGG | + | chr1.2:66293806-66293825 | MS.gene20730:CDS | 40.0% | |
| TTCAAATTCACTGCTATGCC+TGG | + | chr1.2:66292526-66292545 | MS.gene20730:intron | 40.0% | |
| TTCAGATGGAAAGAGTAGAG+AGG | + | chr1.2:66295469-66295488 | MS.gene20730:CDS | 40.0% | |
| TTCTCAGGCACATACAAGTA+AGG | - | chr1.2:66291973-66291992 | None:intergenic | 40.0% | |
| TTGAAAGACCAGTTGAGCTT+AGG | - | chr1.2:66294584-66294603 | None:intergenic | 40.0% | |
| TTTCTTTGGGTACAGATTGG+GGG | + | chr1.2:66293214-66293233 | MS.gene20730:intron | 40.0% | |
| ! | AGAGGAGGATGTAATTTTCG+TGG | + | chr1.2:66292425-66292444 | MS.gene20730:intron | 40.0% |
| ! | ATATGAGAATGGACTTGTGG+AGG | + | chr1.2:66292043-66292062 | MS.gene20730:intron | 40.0% |
| ! | CTATGTTAGCTTAGAGGTAG+TGG | - | chr1.2:66293273-66293292 | None:intergenic | 40.0% |
| ! | TTATCAATTTTGTGGGGAGG+GGG | + | chr1.2:66291837-66291856 | MS.gene20730:intron | 40.0% |
| !! | CTGGTATGCTTGATTTGTAG+GGG | + | chr1.2:66292613-66292632 | MS.gene20730:intron | 40.0% |
| !! | TGATTGCAGGACTGTTTTGA+GGG | + | chr1.2:66292311-66292330 | MS.gene20730:intron | 40.0% |
| !! | TTATGAAGGTGCTGTACACT+TGG | + | chr1.2:66295226-66295245 | MS.gene20730:CDS | 40.0% |
| !!! | GTAAACCAGGCCTTGTTTTA+TGG | + | chr1.2:66294032-66294051 | MS.gene20730:intron | 40.0% |
| AAAATGTCCTATGTGCCGAG+AGG | + | chr1.2:66294408-66294427 | MS.gene20730:CDS | 45.0% | |
| AACAGGCCTTAACAAAGGTC+GGG | - | chr1.2:66294634-66294653 | None:intergenic | 45.0% | |
| AAGAGCTCACAAGCAAGTGA+TGG | - | chr1.2:66293840-66293859 | None:intergenic | 45.0% | |
| AGATGGGATCTACTCTGTGA+AGG | + | chr1.2:66292080-66292099 | MS.gene20730:intron | 45.0% | |
| AGCTCGCATGTATTCCTGAT+AGG | - | chr1.2:66291322-66291341 | None:intergenic | 45.0% | |
| AGGAAATTCTTCAGAGTCCC+TGG | + | chr1.2:66293706-66293725 | MS.gene20730:CDS | 45.0% | |
| ATAAGGAGATATGGGCCAAG+AGG | + | chr1.2:66292109-66292128 | MS.gene20730:intron | 45.0% | |
| ATTTGCCAAGTAAGGCATGG+TGG | + | chr1.2:66292388-66292407 | MS.gene20730:intron | 45.0% | |
| CTCTGTGAAGGCAGTGTATA+AGG | + | chr1.2:66292092-66292111 | MS.gene20730:intron | 45.0% | |
| GAAGCTATACCGTTAAGGCT+GGG | + | chr1.2:66292646-66292665 | MS.gene20730:intron | 45.0% | |
| GAAGTTCTGCAAGACCTATC+AGG | + | chr1.2:66291305-66291324 | MS.gene20730:CDS | 45.0% | |
| GAGGAGGGAGTCATTTCATT+TGG | + | chr1.2:66292001-66292020 | MS.gene20730:intron | 45.0% | |
| GATGTGTACAAGATGCATGG+AGG | + | chr1.2:66291925-66291944 | MS.gene20730:intron | 45.0% | |
| GCAATGGGTGGCTACATTAA+GGG | - | chr1.2:66294894-66294913 | None:intergenic | 45.0% | |
| GCAGTAGGATCTCATTAGAG+TGG | + | chr1.2:66294444-66294463 | MS.gene20730:intron | 45.0% | |
| GCATATGGTAGCTTACCTCT+CGG | - | chr1.2:66294426-66294445 | None:intergenic | 45.0% | |
| GGGCTTGAGAAAATAGTAGC+AGG | + | chr1.2:66292547-66292566 | MS.gene20730:intron | 45.0% | |
| GGTAAGCTACCATATGCAGT+AGG | + | chr1.2:66294429-66294448 | MS.gene20730:intron | 45.0% | |
| TCAAACACTGTGTCCTGTCA+TGG | - | chr1.2:66294286-66294305 | None:intergenic | 45.0% | |
| TGAAGCTATACCGTTAAGGC+TGG | + | chr1.2:66292645-66292664 | MS.gene20730:intron | 45.0% | |
| TGACAGGCAGGAGTTTATGA+AGG | + | chr1.2:66295212-66295231 | MS.gene20730:intron | 45.0% | |
| TGCTTAGATATAGGGACGGA+GGG | + | chr1.2:66295140-66295159 | MS.gene20730:intron | 45.0% | |
| TGGAACCATAAAACAAGGCC+TGG | - | chr1.2:66294040-66294059 | None:intergenic | 45.0% | |
| TGGAACTGCACCAATTGGTT+AGG | - | chr1.2:66294166-66294185 | None:intergenic | 45.0% | |
| TGGGTGCTTAGATATAGGGA+CGG | + | chr1.2:66295136-66295155 | MS.gene20730:intron | 45.0% | |
| TTCGACCTGTCTACGAAAAC+TGG | - | chr1.2:66292685-66292704 | None:intergenic | 45.0% | |
| ! | CTGATTGCAGGACTGTTTTG+AGG | + | chr1.2:66292310-66292329 | MS.gene20730:intron | 45.0% |
| ! | GATCCAGTTTCTCTGACTTG+TGG | + | chr1.2:66294304-66294323 | MS.gene20730:CDS | 45.0% |
| ! | GCTACTATTTTCTCAAGCCC+AGG | - | chr1.2:66292547-66292566 | None:intergenic | 45.0% |
| ! | GCTGCTGTTATTTGGTAGCA+CGG | - | chr1.2:66292278-66292297 | None:intergenic | 45.0% |
| ! | GGAGGATGTAATTTTCGTGG+TGG | + | chr1.2:66292428-66292447 | MS.gene20730:intron | 45.0% |
| ! | TTTACAGCTGCAAGGAGTAC+TGG | + | chr1.2:66295436-66295455 | MS.gene20730:intron | 45.0% |
| !! | GAAATTGTCAAGGGTGTCGA+TGG | + | chr1.2:66292225-66292244 | MS.gene20730:intron | 45.0% |
| !! | TAATCTGGCTCTTCCATGAC+AGG | + | chr1.2:66294270-66294289 | MS.gene20730:intron | 45.0% |
| !! | TTACAGCTGCAAGGAGTACT+GGG | + | chr1.2:66295437-66295456 | MS.gene20730:intron | 45.0% |
| !!! | ATTATTTTGTTTTAATTTTA+CGG | + | chr1.2:66291480-66291499 | MS.gene20730:intron | 5.0% |
| AAGGGACGGAGGGAGTAATA+AGG | - | chr1.2:66294876-66294895 | None:intergenic | 50.0% | |
| ACAAGCCCAGACTATGCACA+AGG | + | chr1.2:66293686-66293705 | MS.gene20730:CDS | 50.0% | |
| ACACTCCACCATGCCTTACT+TGG | - | chr1.2:66292396-66292415 | None:intergenic | 50.0% | |
| ACAGGTCGAACCTTGGTTTC+TGG | + | chr1.2:66292695-66292714 | MS.gene20730:intron | 50.0% | |
| AGACCAGTTGAGCTTAGGAC+AGG | - | chr1.2:66294579-66294598 | None:intergenic | 50.0% | |
| AGAGAGGGTCAAGCAAGCAA+AGG | + | chr1.2:66295485-66295504 | MS.gene20730:CDS | 50.0% | |
| AGTCACTGAAGCTGAAGGGT+CGG | - | chr1.2:66293101-66293120 | None:intergenic | 50.0% | |
| CAGAAGAAGCTCCCTGTAGT+TGG | + | chr1.2:66291348-66291367 | MS.gene20730:CDS | 50.0% | |
| CATCAGTGGAAGTGAGATGG+TGG | + | chr1.2:66292718-66292737 | MS.gene20730:intron | 50.0% | |
| CTGGAACGACATCTTGCTTC+TGG | + | chr1.2:66293394-66293413 | MS.gene20730:CDS | 50.0% | |
| CTGGGAGGAAAGACTTCAGA+TGG | + | chr1.2:66295455-66295474 | MS.gene20730:CDS | 50.0% | |
| GATCCTGTCCTAAGCTCAAC+TGG | + | chr1.2:66294573-66294592 | MS.gene20730:intron | 50.0% | |
| GCCATCAGCTCAATAAGCCA+GGG | - | chr1.2:66293726-66293745 | None:intergenic | 50.0% | |
| GCGGATGTGTACAAGATGCA+TGG | + | chr1.2:66291922-66291941 | MS.gene20730:intron | 50.0% | |
| GGCAATGGGTGGCTACATTA+AGG | - | chr1.2:66294895-66294914 | None:intergenic | 50.0% | |
| GTGCTTAGATATAGGGACGG+AGG | + | chr1.2:66295139-66295158 | MS.gene20730:intron | 50.0% | |
| TAGCTTACCTCTCGGCACAT+AGG | - | chr1.2:66294418-66294437 | None:intergenic | 50.0% | |
| TATGTGCCTGAGAATGGAGC+TGG | + | chr1.2:66291979-66291998 | MS.gene20730:intron | 50.0% | |
| TCAGGAATACATGCGAGCTC+AGG | + | chr1.2:66291323-66291342 | MS.gene20730:CDS | 50.0% | |
| TCCACTGATGCCAGAAACCA+AGG | - | chr1.2:66292708-66292727 | None:intergenic | 50.0% | |
| TCCCTGGCTTATTGAGCTGA+TGG | + | chr1.2:66293722-66293741 | MS.gene20730:CDS | 50.0% | |
| TGCCATCAGCTCAATAAGCC+AGG | - | chr1.2:66293727-66293746 | None:intergenic | 50.0% | |
| TGGCATCAGTGGAAGTGAGA+TGG | + | chr1.2:66292715-66292734 | MS.gene20730:intron | 50.0% | |
| TGGCCACAAGTCAGAGAAAC+TGG | - | chr1.2:66294310-66294329 | None:intergenic | 50.0% | |
| TGGCTACATTAAGGGACGGA+GGG | - | chr1.2:66294886-66294905 | None:intergenic | 50.0% | |
| TGGGTGGCTACATTAAGGGA+CGG | - | chr1.2:66294890-66294909 | None:intergenic | 50.0% | |
| TGTGCATCAGACCAAGAACC+AGG | + | chr1.2:66294551-66294570 | MS.gene20730:intron | 50.0% | |
| TTCGTAGACAGGTCGAACCT+TGG | + | chr1.2:66292688-66292707 | MS.gene20730:intron | 50.0% | |
| TTGAGCTTAGGACAGGATCC+TGG | - | chr1.2:66294572-66294591 | None:intergenic | 50.0% | |
| TTGGGTATGACATCTCCCAG+TGG | + | chr1.2:66292501-66292520 | MS.gene20730:intron | 50.0% | |
| ! | AACGCAGTGTAGAGCGTTCA+TGG | + | chr1.2:66295518-66295537 | MS.gene20730:CDS | 50.0% |
| ! | AATGGACTTGTGGAGGTGGT+TGG | + | chr1.2:66292050-66292069 | MS.gene20730:intron | 50.0% |
| ! | ACGCAGTGTAGAGCGTTCAT+GGG | + | chr1.2:66295519-66295538 | MS.gene20730:CDS | 50.0% |
| ! | AGCTGAAGGGTCGGTCATTT+TGG | - | chr1.2:66293092-66293111 | None:intergenic | 50.0% |
| ! | CGTTGCCAGTTTTCGTAGAC+AGG | + | chr1.2:66292677-66292696 | MS.gene20730:intron | 50.0% |
| ! | TAGGACAGGATCCTGGTTCT+TGG | - | chr1.2:66294565-66294584 | None:intergenic | 50.0% |
| ! | TCAAGCAAGCAAAGGAGCAC+TGG | + | chr1.2:66295493-66295512 | MS.gene20730:CDS | 50.0% |
| ! | TGAGAATGGACTTGTGGAGG+TGG | + | chr1.2:66292046-66292065 | MS.gene20730:intron | 50.0% |
| !! | ACCTTGGTTTCTGGCATCAG+TGG | + | chr1.2:66292704-66292723 | MS.gene20730:intron | 50.0% |
| !! | AGTGGAAGTGAGATGGTGGA+GGG | + | chr1.2:66292722-66292741 | MS.gene20730:intron | 50.0% |
| !! | ATGGGTTCGGTGACGTACAT+GGG | - | chr1.2:66291449-66291468 | None:intergenic | 50.0% |
| !! | CAAGCAAGCAAAGGAGCACT+GGG | + | chr1.2:66295494-66295513 | MS.gene20730:CDS | 50.0% |
| !! | CATGGGCATTGATCAGGACA+AGG | - | chr1.2:66291432-66291451 | None:intergenic | 50.0% |
| !! | GACGTACATGGGCATTGATC+AGG | - | chr1.2:66291438-66291457 | None:intergenic | 50.0% |
| !! | TGCTTGATTTGTAGGGGCTG+CGG | + | chr1.2:66292619-66292638 | MS.gene20730:intron | 50.0% |
| AGGTGGTTGGAAGAGGCAGA+TGG | + | chr1.2:66292063-66292082 | MS.gene20730:intron | 55.0% | |
| CTGAGAATGGAGCTGGAGGA+GGG | + | chr1.2:66291986-66292005 | MS.gene20730:intron | 55.0% | |
| CTTGTGGAGGTGGTTGGAAG+AGG | + | chr1.2:66292056-66292075 | MS.gene20730:intron | 55.0% | |
| GGCAAAGGATGCAGCAGTAG+CGG | + | chr1.2:66291903-66291922 | MS.gene20730:intron | 55.0% | |
| GGTGGTTGGAAGAGGCAGAT+GGG | + | chr1.2:66292064-66292083 | MS.gene20730:intron | 55.0% | |
| GTGGCTACATTAAGGGACGG+AGG | - | chr1.2:66294887-66294906 | None:intergenic | 55.0% | |
| TCAGCGTGCACAGAAACTGC+TGG | + | chr1.2:66293375-66293394 | MS.gene20730:CDS | 55.0% | |
| ! | CAGTGGAAGTGAGATGGTGG+AGG | + | chr1.2:66292721-66292740 | MS.gene20730:intron | 55.0% |
| ! | GAGCTTGCTCCCAGCCTTAA+CGG | - | chr1.2:66292658-66292677 | None:intergenic | 55.0% |
| !! | AGTAGCAGGGATTTGGTGGC+AGG | + | chr1.2:66292561-66292580 | MS.gene20730:intron | 55.0% |
| !! | GATGGGTTCGGTGACGTACA+TGG | - | chr1.2:66291450-66291469 | None:intergenic | 55.0% |
| !! | GTAGCAGGGATTTGGTGGCA+GGG | + | chr1.2:66292562-66292581 | MS.gene20730:intron | 55.0% |
| !!! | GGGATTTGGTGGCAGGGTTT+TGG | + | chr1.2:66292568-66292587 | MS.gene20730:intron | 55.0% |
| CCTCCTCCAGCTCCATTCTC+AGG | - | chr1.2:66291988-66292007 | None:intergenic | 60.0% | |
| CCTGAGAATGGAGCTGGAGG+AGG | + | chr1.2:66291985-66292004 | MS.gene20730:intron | 60.0% | |
| GTGCCTGAGAATGGAGCTGG+AGG | + | chr1.2:66291982-66292001 | MS.gene20730:intron | 60.0% | |
| !! | CAGCTGCAAGGAGTACTGGG+AGG | + | chr1.2:66295440-66295459 | MS.gene20730:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 66291303 | 66295548 | 66291303 | ID=MS.gene20730 |
| chr1.2 | mRNA | 66291303 | 66295548 | 66291303 | ID=MS.gene20730.t1;Parent=MS.gene20730 |
| chr1.2 | exon | 66291303 | 66291450 | 66291303 | ID=MS.gene20730.t1.exon1;Parent=MS.gene20730.t1 |
| chr1.2 | CDS | 66291303 | 66291450 | 66291303 | ID=cds.MS.gene20730.t1;Parent=MS.gene20730.t1 |
| chr1.2 | exon | 66293311 | 66293555 | 66293311 | ID=MS.gene20730.t1.exon2;Parent=MS.gene20730.t1 |
| chr1.2 | CDS | 66293311 | 66293555 | 66293311 | ID=cds.MS.gene20730.t1;Parent=MS.gene20730.t1 |
| chr1.2 | exon | 66293651 | 66293905 | 66293651 | ID=MS.gene20730.t1.exon3;Parent=MS.gene20730.t1 |
| chr1.2 | CDS | 66293651 | 66293905 | 66293651 | ID=cds.MS.gene20730.t1;Parent=MS.gene20730.t1 |
| chr1.2 | exon | 66294292 | 66294429 | 66294292 | ID=MS.gene20730.t1.exon4;Parent=MS.gene20730.t1 |
| chr1.2 | CDS | 66294292 | 66294429 | 66294292 | ID=cds.MS.gene20730.t1;Parent=MS.gene20730.t1 |
| chr1.2 | exon | 66295218 | 66295276 | 66295218 | ID=MS.gene20730.t1.exon5;Parent=MS.gene20730.t1 |
| chr1.2 | CDS | 66295218 | 66295276 | 66295218 | ID=cds.MS.gene20730.t1;Parent=MS.gene20730.t1 |
| chr1.2 | exon | 66295443 | 66295548 | 66295443 | ID=MS.gene20730.t1.exon6;Parent=MS.gene20730.t1 |
| chr1.2 | CDS | 66295443 | 66295548 | 66295443 | ID=cds.MS.gene20730.t1;Parent=MS.gene20730.t1 |
| Gene Sequence |
| Protein sequence |
