AlfalfaGEDB | MS.gene20879

M. sativa cultivar XinJiangDaYe / MS.gene20879

KEGG: K04125
GO: GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0016491 GO:0055114
PFAM: PF03171.23 PF14226.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20879.t1	XP_003591361.1	94.6	349	14	2	1	349	1	344	2.10E-187	664.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20879.t1	Q9XHM5	87.9	347	38	2	1	347	1	343	8.0e-175	614.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20879.t1	G7ICU1	94.6	349	14	2	1	349	1	344	1.5e-187	664.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene20879	MS.gene72095	PPI
MS.gene05872	MS.gene20879	PPI
MS.gene20879	MS.gene049076	PPI
MS.gene20879	MS.gene015801	PPI
MS.gene20879	MS.gene059563	PPI
MS.gene20879	MS.gene063300	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20879.t1	MTR_1g086550	95.702	349	10	2	1	349	1	344	0.0	690
MS.gene20879.t1	MTR_4g123020	55.490	337	131	3	1	336	1	319	1.07e-129	374
MS.gene20879.t1	MTR_2g033270	54.303	337	132	4	1	336	1	316	2.22e-122	355
MS.gene20879.t1	MTR_2g019370	51.258	318	142	2	19	336	27	331	5.33e-112	329
MS.gene20879.t1	MTR_2g070870	49.379	322	142	4	15	336	23	323	4.40e-107	317
MS.gene20879.t1	MTR_4g096840	48.598	321	145	4	19	336	28	331	4.01e-104	309
MS.gene20879.t1	MTR_8g461330	48.837	344	155	6	1	336	1	331	7.38e-104	309
MS.gene20879.t1	MTR_4g087100	31.285	358	194	11	16	350	22	350	1.95e-42	151
MS.gene20879.t1	MTR_6g015950	32.581	310	179	8	20	323	39	324	3.14e-40	144
MS.gene20879.t1	MTR_7g068650	32.416	327	189	9	4	319	38	343	3.82e-39	142
MS.gene20879.t1	MTR_1g034120	30.183	328	183	8	16	318	22	328	5.51e-39	142
MS.gene20879.t1	MTR_4g015790	32.588	313	179	8	18	319	60	351	9.79e-39	141
MS.gene20879.t1	MTR_4g087140	28.614	339	199	8	3	318	9	327	7.91e-38	139
MS.gene20879.t1	MTR_8g024120	30.088	339	199	10	10	337	32	343	8.51e-38	138
MS.gene20879.t1	MTR_5g055690	29.446	343	211	10	8	342	35	354	1.03e-37	138
MS.gene20879.t1	MTR_1g034060	29.573	328	185	8	16	318	22	328	1.26e-37	138
MS.gene20879.t1	MTR_3g096500	30.503	318	170	10	21	316	67	355	1.61e-37	139
MS.gene20879.t1	MTR_4g087110	28.771	358	203	9	16	350	22	350	1.67e-37	138
MS.gene20879.t1	MTR_4g087090	28.371	356	210	8	3	337	13	344	2.28e-37	137
MS.gene20879.t1	MTR_1g034140	31.988	347	189	14	20	350	27	342	6.46e-37	136
MS.gene20879.t1	MTR_0328s0030	30.086	349	204	12	4	340	29	349	2.04e-36	135
MS.gene20879.t1	MTR_1g070135	29.085	306	186	6	20	318	38	319	9.60e-36	133
MS.gene20879.t1	MTR_4g087120	28.997	369	188	13	16	350	22	350	2.98e-35	132
MS.gene20879.t1	MTR_2g102570	30.408	319	188	8	8	318	41	333	7.05e-35	131
MS.gene20879.t1	MTR_5g055900	30.581	327	197	9	20	339	47	350	7.91e-35	130
MS.gene20879.t1	MTR_1g102070	29.167	312	184	7	20	316	59	348	2.59e-34	130
MS.gene20879.t1	MTR_0009s0050	30.267	337	203	10	20	348	47	359	2.59e-34	129
MS.gene20879.t1	MTR_3g092890	28.613	346	204	10	6	335	16	334	2.96e-34	129
MS.gene20879.t1	MTR_1g070120	28.302	318	196	8	20	330	38	330	3.93e-34	129
MS.gene20879.t1	MTR_0009s0050	29.565	345	211	10	4	340	31	351	6.89e-34	128
MS.gene20879.t1	MTR_5g048550	30.183	328	195	10	20	338	47	349	7.41e-34	128
MS.gene20879.t1	MTR_5g055680	29.394	330	203	9	20	342	47	353	7.48e-34	128
MS.gene20879.t1	MTR_7g016090	32.432	296	171	9	20	310	39	310	1.06e-33	127
MS.gene20879.t1	MTR_7g016090	32.432	296	171	9	20	310	41	312	1.23e-33	127
MS.gene20879.t1	MTR_8g033380	30.380	316	186	8	36	341	77	368	1.38e-33	128
MS.gene20879.t1	MTR_1g070085	29.936	314	174	10	20	318	37	319	1.42e-33	127
MS.gene20879.t1	MTR_1g070085	29.936	314	174	10	20	318	37	319	1.42e-33	127
MS.gene20879.t1	MTR_7g062580	29.642	307	183	10	20	318	55	336	4.42e-33	126
MS.gene20879.t1	MTR_5g032870	29.114	316	189	8	20	323	38	330	7.98e-33	125
MS.gene20879.t1	MTR_8g093930	28.135	327	199	8	5	318	33	336	9.32e-33	125
MS.gene20879.t1	MTR_2g072890	28.809	361	195	12	2	338	34	356	1.07e-32	125
MS.gene20879.t1	MTR_7g062570	29.607	331	193	12	20	338	55	357	1.41e-32	125
MS.gene20879.t1	MTR_7g062550	29.787	329	199	10	20	340	60	364	1.79e-32	125
MS.gene20879.t1	MTR_6g464620	27.616	344	209	9	18	344	62	382	2.15e-32	125
MS.gene20879.t1	MTR_3g058610	27.726	321	206	8	24	341	49	346	2.29e-32	124
MS.gene20879.t1	MTR_3g015110	40.957	188	88	5	1	169	1	184	2.50e-32	120
MS.gene20879.t1	MTR_3g015110	47.692	65	30	1	221	285	149	209	8.98e-12	64.3
MS.gene20879.t1	MTR_5g048470	28.012	332	202	12	20	340	53	358	6.56e-32	123
MS.gene20879.t1	MTR_0009s0480	27.684	354	206	11	4	340	30	350	7.44e-32	122
MS.gene20879.t1	MTR_7g063730	27.964	329	203	11	20	339	64	367	8.49e-32	123
MS.gene20879.t1	MTR_5g048740	28.324	346	211	11	4	338	29	348	1.10e-31	122
MS.gene20879.t1	MTR_5g055820	28.990	307	194	6	39	342	69	354	1.10e-31	122
MS.gene20879.t1	MTR_8g064200	28.012	332	202	12	20	340	57	362	1.34e-31	122
MS.gene20879.t1	MTR_8g064200	28.012	332	202	12	20	340	52	357	1.49e-31	122
MS.gene20879.t1	MTR_3g063180	27.586	319	193	9	20	323	42	337	1.83e-31	122
MS.gene20879.t1	MTR_5g032880	28.261	322	180	9	19	324	37	323	2.60e-31	125
MS.gene20879.t1	MTR_5g032880	28.000	325	183	9	19	323	375	668	4.87e-30	121
MS.gene20879.t1	MTR_5g048570	29.129	333	202	11	17	340	42	349	4.38e-31	120
MS.gene20879.t1	MTR_3g088565	27.103	321	190	11	18	324	1	291	8.75e-31	119
MS.gene20879.t1	MTR_2g072910	30.030	333	191	14	20	338	51	355	1.65e-30	119
MS.gene20879.t1	MTR_5g022020	28.247	308	188	9	17	317	41	322	2.09e-30	119
MS.gene20879.t1	MTR_8g041620	29.226	349	186	14	18	341	66	378	3.92e-30	119
MS.gene20879.t1	MTR_5g065010	28.399	331	197	9	20	337	39	342	5.01e-30	117
MS.gene20879.t1	MTR_5g059130	29.316	307	185	9	20	318	44	326	5.14e-30	117
MS.gene20879.t1	MTR_3g072810	30.284	317	194	7	12	323	32	326	5.36e-30	117
MS.gene20879.t1	MTR_8g075890	27.640	322	205	8	24	341	49	346	1.03e-29	117
MS.gene20879.t1	MTR_2g069010	27.988	343	198	10	18	341	67	379	1.32e-29	117
MS.gene20879.t1	MTR_2g069210	30.240	334	187	12	20	337	64	367	1.55e-29	117
MS.gene20879.t1	MTR_1g062110	29.508	305	176	9	20	310	66	345	2.37e-29	116
MS.gene20879.t1	MTR_3g070860	27.523	327	204	9	4	319	34	338	2.79e-29	115
MS.gene20879.t1	MTR_5g055800	28.696	345	209	12	4	338	31	348	4.39e-29	115
MS.gene20879.t1	MTR_2g069300	29.524	315	176	12	20	318	54	338	6.18e-29	115
MS.gene20879.t1	MTR_2g437380	28.076	317	193	10	30	338	68	357	9.25e-29	114
MS.gene20879.t1	MTR_7g062600	28.012	332	202	12	20	340	51	356	1.31e-28	114
MS.gene20879.t1	MTR_5g048850	28.267	329	200	12	20	338	47	349	1.44e-28	114
MS.gene20879.t1	MTR_1g081840	28.904	301	176	9	32	320	72	346	1.54e-28	114
MS.gene20879.t1	MTR_8g075830	27.469	324	203	9	24	341	49	346	1.91e-28	114
MS.gene20879.t1	MTR_1g033810	29.938	324	182	11	10	318	37	330	1.98e-28	113
MS.gene20879.t1	MTR_7g016080	28.526	312	180	11	20	323	41	317	2.41e-28	112
MS.gene20879.t1	MTR_2g069190	29.326	341	181	12	20	337	68	371	4.46e-28	112
MS.gene20879.t1	MTR_2g068840	26.140	329	205	7	10	325	45	348	4.77e-28	112
MS.gene20879.t1	MTR_7g102820	27.103	321	189	9	18	318	65	360	6.80e-28	112
MS.gene20879.t1	MTR_7g451860	28.213	319	170	10	20	320	41	318	8.46e-28	111
MS.gene20879.t1	MTR_7g047670	28.213	319	170	10	20	320	41	318	8.46e-28	111
MS.gene20879.t1	MTR_5g005570	27.532	316	173	9	20	320	37	311	1.08e-27	111
MS.gene20879.t1	MTR_3g091360	26.420	352	210	12	6	340	38	357	1.34e-27	111
MS.gene20879.t1	MTR_1g027290	28.529	340	191	11	20	337	29	338	1.36e-27	110
MS.gene20879.t1	MTR_8g093980	26.061	330	211	7	18	335	57	365	2.35e-27	111
MS.gene20879.t1	MTR_1g011580	30.035	283	166	7	20	297	63	318	2.71e-27	110
MS.gene20879.t1	MTR_5g011250	27.950	322	192	10	13	318	40	337	4.32e-27	110
MS.gene20879.t1	MTR_2g069060	28.144	334	195	11	18	337	47	349	4.51e-27	109
MS.gene20879.t1	MTR_4g087130	29.213	356	199	12	16	348	22	347	6.04e-27	109
MS.gene20879.t1	MTR_8g041600	29.310	348	191	16	18	342	66	381	9.10e-27	109
MS.gene20879.t1	MTR_7g062560	26.230	305	186	10	20	318	62	333	1.10e-26	108
MS.gene20879.t1	MTR_3g040410	27.389	314	185	9	20	320	6	289	1.25e-26	107
MS.gene20879.t1	MTR_5g059140	27.760	317	197	9	1	307	21	315	1.26e-26	108
MS.gene20879.t1	MTR_7g077670	28.165	316	176	9	20	318	11	292	1.32e-26	108
MS.gene20879.t1	MTR_1g032220	26.284	331	195	9	20	335	73	369	1.42e-26	108
MS.gene20879.t1	MTR_1g093120	27.143	350	195	13	11	337	58	370	1.89e-26	108
MS.gene20879.t1	MTR_2g083000	28.526	312	175	10	20	320	33	307	2.07e-26	107
MS.gene20879.t1	MTR_3g091350	26.074	349	211	11	9	341	48	365	2.79e-26	107
MS.gene20879.t1	MTR_2g069090	29.167	336	189	12	20	337	68	372	3.60e-26	107
MS.gene20879.t1	MTR_2g025120	26.349	315	199	10	20	327	4	292	4.09e-26	106
MS.gene20879.t1	MTR_0032s0040	27.660	329	204	10	20	338	70	374	8.65e-26	106
MS.gene20879.t1	MTR_1g070085	31.980	197	110	5	123	318	68	241	1.45e-25	103
MS.gene20879.t1	MTR_1g070080	25.077	323	204	8	20	332	38	332	2.21e-25	105
MS.gene20879.t1	MTR_0009s0050	34.286	175	94	4	176	348	24	179	2.41e-25	100
MS.gene20879.t1	MTR_1g093110	27.353	340	190	13	20	337	70	374	3.75e-25	105
MS.gene20879.t1	MTR_7g056347	27.326	344	191	13	18	337	65	373	3.93e-25	104
MS.gene20879.t1	MTR_1g070100	31.373	204	116	5	115	317	56	236	4.20e-25	102
MS.gene20879.t1	MTR_5g082750	28.889	315	183	14	20	319	49	337	4.62e-25	104
MS.gene20879.t1	MTR_1g093140	25.496	353	205	12	8	337	61	378	4.91e-25	104
MS.gene20879.t1	MTR_8g009080	27.463	335	195	11	20	337	94	397	7.57e-25	104
MS.gene20879.t1	MTR_8g028435	28.614	339	187	14	20	337	60	364	8.39e-25	103
MS.gene20879.t1	MTR_1g032250	26.480	321	207	8	20	335	73	369	8.59e-25	103
MS.gene20879.t1	MTR_1g043760	26.888	331	182	11	12	318	42	336	2.53e-24	102
MS.gene20879.t1	MTR_4g074130	26.537	309	187	10	20	320	40	316	3.15e-24	102
MS.gene20879.t1	MTR_0009s0050	34.286	175	94	4	176	348	106	261	4.13e-24	99.8
MS.gene20879.t1	MTR_2g068960	27.353	340	196	10	18	337	61	369	4.29e-24	102
MS.gene20879.t1	MTR_3g083370	26.349	315	197	11	28	336	16	301	4.34e-24	100
MS.gene20879.t1	MTR_3g088745	26.923	312	193	9	35	335	58	345	4.68e-24	101
MS.gene20879.t1	MTR_7g029655	27.193	342	191	12	20	339	67	372	6.02e-24	101
MS.gene20879.t1	MTR_0009s0050	35.329	167	87	4	176	340	106	253	9.31e-24	99.0
MS.gene20879.t1	MTR_5g085330	26.562	320	198	10	18	327	3	295	9.93e-24	100
MS.gene20879.t1	MTR_8g009170	27.195	353	176	13	20	337	60	366	1.30e-23	100
MS.gene20879.t1	MTR_3g072820	26.190	336	204	12	6	324	19	327	2.38e-23	99.4
MS.gene20879.t1	MTR_8g009090	27.353	340	190	13	20	337	60	364	3.39e-23	99.4
MS.gene20879.t1	MTR_8g074050	26.748	329	204	11	20	337	52	354	6.40e-23	98.2
MS.gene20879.t1	MTR_1g043810	26.316	323	181	10	12	311	42	330	7.93e-23	98.2
MS.gene20879.t1	MTR_8g030880	26.019	319	184	9	18	318	8	292	8.26e-23	97.4
MS.gene20879.t1	MTR_0009s0400	36.957	138	84	3	205	340	11	147	9.08e-23	93.2
MS.gene20879.t1	MTR_2g068950	27.114	343	193	11	18	337	61	369	9.14e-23	98.2
MS.gene20879.t1	MTR_4g024660	28.280	343	189	11	18	337	65	373	1.01e-22	98.2
MS.gene20879.t1	MTR_3g117485	26.962	293	181	9	26	311	63	329	1.92e-22	97.1
MS.gene20879.t1	MTR_4g117880	26.531	343	191	13	20	337	60	366	2.92e-22	96.7
MS.gene20879.t1	MTR_4g093840	26.627	338	195	11	20	337	62	366	3.01e-22	96.7
MS.gene20879.t1	MTR_2g083030	25.796	314	182	9	20	320	37	312	3.75e-22	95.9
MS.gene20879.t1	MTR_1g043770	27.303	304	181	9	20	311	53	328	4.28e-22	95.9
MS.gene20879.t1	MTR_0056s0160	27.869	244	148	7	99	340	19	236	4.65e-22	93.6
MS.gene20879.t1	MTR_8g009160	26.866	335	198	12	20	337	60	364	4.66e-22	96.3
MS.gene20879.t1	MTR_8g008930	26.250	320	181	12	36	337	83	365	6.01e-22	95.9
MS.gene20879.t1	MTR_4g021380	26.433	314	195	7	31	335	29	315	7.51e-22	94.7
MS.gene20879.t1	MTR_8g009110	26.712	292	176	9	36	318	83	345	7.53e-22	95.5
MS.gene20879.t1	MTR_1g043775	25.641	312	177	9	20	311	54	330	1.55e-21	94.4
MS.gene20879.t1	MTR_8g074070	26.524	328	206	10	20	337	52	354	1.57e-21	94.4
MS.gene20879.t1	MTR_3g108520	24.332	337	202	7	16	335	14	314	1.67e-21	94.0
MS.gene20879.t1	MTR_4g116010	28.667	300	184	10	18	311	48	323	2.04e-21	94.0
MS.gene20879.t1	MTR_3g117420	25.472	318	198	10	20	322	52	345	2.56e-21	94.0
MS.gene20879.t1	MTR_2g069020	25.000	336	206	9	18	337	65	370	6.19e-21	92.8
MS.gene20879.t1	MTR_5g055690	28.571	259	155	9	8	259	35	270	6.91e-21	91.3
MS.gene20879.t1	MTR_1g070135	29.555	247	143	6	20	259	38	260	7.69e-21	91.3
MS.gene20879.t1	MTR_2g069020	25.000	336	206	9	18	337	65	370	1.05e-20	92.4
MS.gene20879.t1	MTR_3g464530	25.664	339	188	16	20	341	34	325	1.82e-20	90.9
MS.gene20879.t1	MTR_3g117485	26.087	276	172	8	43	311	7	257	2.68e-20	89.7
MS.gene20879.t1	MTR_7g045650	29.758	289	166	12	20	298	60	321	3.35e-20	90.1
MS.gene20879.t1	MTR_1g048940	25.145	346	219	11	14	347	39	356	4.67e-20	90.1
MS.gene20879.t1	MTR_2g068800	26.950	282	139	10	10	273	45	277	5.92e-20	89.0
MS.gene20879.t1	MTR_8g062600	24.646	353	197	12	14	337	61	373	9.00e-20	89.7
MS.gene20879.t1	MTR_1g032140	40.351	114	65	3	207	318	233	345	1.07e-19	89.4
MS.gene20879.t1	MTR_2g437380	25.952	289	180	9	58	338	1	263	1.09e-19	87.8
MS.gene20879.t1	MTR_5g027230	25.879	313	194	9	20	326	6	286	1.37e-19	88.2
MS.gene20879.t1	MTR_7g081710	25.749	334	201	11	20	337	49	351	1.51e-19	89.0
MS.gene20879.t1	MTR_3g026150	25.150	334	207	12	17	337	57	360	1.61e-19	89.0
MS.gene20879.t1	MTR_8g469400	27.331	311	174	9	44	337	85	360	2.63e-19	88.2
MS.gene20879.t1	MTR_4g021360	27.751	209	131	3	128	335	123	312	5.73e-19	86.7
MS.gene20879.t1	MTR_1g027310	24.841	314	153	9	20	317	49	295	7.63e-19	86.3
MS.gene20879.t1	MTR_7g056393	28.035	346	186	15	18	337	65	373	2.18e-18	85.5
MS.gene20879.t1	MTR_2g072910	31.641	256	134	13	20	262	51	278	4.68e-18	83.6
MS.gene20879.t1	MTR_5g025090	26.923	312	180	11	20	320	5	279	4.82e-18	83.6
MS.gene20879.t1	MTR_4g119410	26.667	345	192	13	18	337	65	373	6.11e-18	84.3
MS.gene20879.t1	MTR_4g100590	25.680	331	205	9	15	331	4	307	7.04e-18	83.6
MS.gene20879.t1	MTR_4g100600	25.904	332	208	10	15	331	4	312	1.44e-17	82.8
MS.gene20879.t1	MTR_1g070185	25.243	309	191	7	20	318	69	347	1.69e-17	83.2
MS.gene20879.t1	MTR_1g062110	28.740	254	142	9	20	259	66	294	1.83e-17	82.4
MS.gene20879.t1	MTR_8g063070	25.460	326	199	11	18	328	65	361	3.40e-17	82.0
MS.gene20879.t1	MTR_5g025050	24.051	316	209	7	20	332	5	292	4.63e-17	80.9
MS.gene20879.t1	MTR_4g011720	26.298	289	178	8	36	318	33	292	4.71e-17	81.3
MS.gene20879.t1	MTR_8g006930	26.050	357	179	14	18	337	65	373	7.80e-17	81.3
MS.gene20879.t1	MTR_1g070110	33.333	123	80	2	210	332	107	227	8.58e-17	79.0
MS.gene20879.t1	MTR_8g009180	36.923	130	77	3	207	332	161	289	9.99e-17	79.7
MS.gene20879.t1	MTR_7g105070	34.532	139	81	5	207	338	228	363	1.44e-16	80.1
MS.gene20879.t1	MTR_8g074070	25.305	328	191	13	20	337	52	335	4.43e-16	78.6
MS.gene20879.t1	MTR_6g088665	27.439	328	201	11	15	323	16	325	8.40e-16	77.8
MS.gene20879.t1	MTR_6g088665	27.356	329	201	10	15	323	16	326	8.47e-16	77.8
MS.gene20879.t1	MTR_4g011690	26.238	202	125	5	154	338	116	310	1.07e-15	77.0
MS.gene20879.t1	MTR_3g045230	35.135	111	71	1	209	318	224	334	1.30e-15	77.4
MS.gene20879.t1	MTR_7g078010	25.146	342	174	14	12	318	59	353	1.53e-15	77.4
MS.gene20879.t1	MTR_5g024940	33.803	142	85	5	194	330	130	267	2.23e-15	75.9
MS.gene20879.t1	MTR_5g048850	27.823	248	148	10	20	260	47	270	5.64e-15	74.7
MS.gene20879.t1	MTR_4g132770	34.167	120	75	3	209	325	43	161	1.61e-14	70.9
MS.gene20879.t1	MTR_7g090520	34.783	115	70	3	200	312	176	287	1.64e-14	73.9
MS.gene20879.t1	MTR_3g043900	35.135	111	71	1	209	318	223	333	1.76e-14	73.9
MS.gene20879.t1	MTR_7g056353	27.397	219	130	6	125	336	150	346	2.61e-14	74.3
MS.gene20879.t1	MTR_7g102720	35.135	111	71	1	209	318	205	315	6.39e-14	72.0
MS.gene20879.t1	MTR_2g025120	24.797	246	153	9	20	259	4	223	8.83e-14	70.1
MS.gene20879.t1	MTR_4g115990	24.746	295	185	6	18	311	44	302	1.03e-13	71.6
MS.gene20879.t1	MTR_3g026150	24.514	257	162	8	86	337	28	257	1.64e-13	70.1
MS.gene20879.t1	MTR_6g092620	21.807	321	209	11	18	329	1	288	4.74e-13	69.3
MS.gene20879.t1	MTR_5g025060	31.250	128	85	3	207	332	142	268	1.60e-12	67.4
MS.gene20879.t1	MTR_8g041600	27.132	258	140	12	18	259	66	291	4.03e-12	66.6
MS.gene20879.t1	MTR_8g009120	33.813	139	79	5	207	337	220	353	7.97e-12	66.2
MS.gene20879.t1	MTR_2g069060	26.275	255	144	9	18	259	25	248	1.93e-11	63.9
MS.gene20879.t1	MTR_8g009080	25.301	249	142	10	20	255	94	311	3.15e-11	64.3
MS.gene20879.t1	MTR_1g043840	28.846	156	89	3	131	286	51	184	4.07e-11	63.9
MS.gene20879.t1	MTR_6g035160	31.061	132	90	1	188	318	28	159	6.03e-11	61.2
MS.gene20879.t1	MTR_1g032240	40.698	86	40	4	205	289	71	146	9.40e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene20879.t1	AT1G02400	56.725	342	127	4	1	336	1	327	1.08e-135	389
MS.gene20879.t1	AT1G47990	53.106	322	133	6	20	339	15	320	1.27e-110	325
MS.gene20879.t1	AT1G30040	45.402	348	163	4	1	338	2	332	5.62e-101	301
MS.gene20879.t1	AT1G02400	52.857	280	112	3	1	275	1	265	4.90e-99	294
MS.gene20879.t1	AT2G34555	45.820	323	157	2	14	336	21	325	3.64e-96	289
MS.gene20879.t1	AT1G78440	47.319	317	153	4	20	336	18	320	1.39e-95	287
MS.gene20879.t1	AT1G30040	42.751	269	127	4	1	259	2	253	1.31e-66	211
MS.gene20879.t1	AT3G19000	29.619	341	195	10	20	336	32	351	3.20e-37	137
MS.gene20879.t1	AT5G24530	32.177	317	181	9	20	327	38	329	3.27e-37	137
MS.gene20879.t1	AT2G38240	31.529	314	188	8	12	319	40	332	1.06e-36	135
MS.gene20879.t1	AT3G19010	27.616	344	201	12	20	338	28	348	1.67e-36	135
MS.gene20879.t1	AT3G19010	27.616	344	201	12	20	338	28	348	1.67e-36	135
MS.gene20879.t1	AT5G08640	29.573	328	194	8	6	318	20	325	2.99e-35	131
MS.gene20879.t1	AT5G08640	29.573	328	194	8	6	318	20	325	2.99e-35	131
MS.gene20879.t1	AT5G05600	31.529	314	182	10	17	319	59	350	6.80e-35	131
MS.gene20879.t1	AT3G55970	31.023	303	184	8	22	320	62	343	9.62e-35	130
MS.gene20879.t1	AT1G80330	28.308	325	203	9	20	337	49	350	1.50e-34	130
MS.gene20879.t1	AT4G10490	30.205	341	188	14	14	336	36	344	2.25e-34	129
MS.gene20879.t1	AT4G16330	28.616	318	186	11	17	324	64	350	3.73e-34	129
MS.gene20879.t1	AT4G25420	28.797	316	187	9	18	318	59	351	1.03e-33	128
MS.gene20879.t1	AT5G63600	30.921	304	184	8	17	318	30	309	3.65e-33	125
MS.gene20879.t1	AT1G15550	29.508	305	185	6	20	318	57	337	5.15e-33	126
MS.gene20879.t1	AT3G19010	27.300	337	181	10	20	338	28	318	8.64e-33	124
MS.gene20879.t1	AT5G51810	29.487	312	186	9	18	318	61	349	1.22e-32	125
MS.gene20879.t1	AT1G80340	31.023	303	183	6	20	318	50	330	2.93e-32	124
MS.gene20879.t1	AT4G10500	27.576	330	200	11	19	336	43	345	2.97e-32	124
MS.gene20879.t1	AT5G63600	31.148	305	183	9	17	318	30	310	3.25e-32	123
MS.gene20879.t1	AT5G07200	29.532	342	190	12	20	337	58	372	9.09e-32	123
MS.gene20879.t1	AT1G78550	29.787	329	195	11	20	337	53	356	1.11e-31	122
MS.gene20879.t1	AT1G17020	27.879	330	206	9	18	337	51	358	2.99e-31	121
MS.gene20879.t1	AT2G36690	30.154	325	185	9	2	310	37	335	7.06e-31	120
MS.gene20879.t1	AT2G36690	30.154	325	185	9	2	310	37	335	7.06e-31	120
MS.gene20879.t1	AT5G59530	29.296	355	200	11	3	337	41	364	7.19e-31	120
MS.gene20879.t1	AT3G21420	30.294	340	183	14	20	337	55	362	1.53e-29	117
MS.gene20879.t1	AT1G55290	30.744	309	175	12	20	318	62	341	2.90e-29	116
MS.gene20879.t1	AT3G51240	26.888	331	209	10	24	349	48	350	5.29e-29	115
MS.gene20879.t1	AT3G13610	27.832	309	186	8	19	318	61	341	6.46e-29	115
MS.gene20879.t1	AT1G04380	26.453	344	212	10	6	337	31	345	1.32e-28	114
MS.gene20879.t1	AT3G11180	28.704	324	200	10	4	319	79	379	4.18e-28	113
MS.gene20879.t1	AT3G11180	28.704	324	200	10	4	319	79	379	5.36e-28	113
MS.gene20879.t1	AT4G22880	28.440	327	192	13	9	318	36	337	5.57e-28	112
MS.gene20879.t1	AT4G22880	28.440	327	192	13	9	318	36	337	5.57e-28	112
MS.gene20879.t1	AT4G22880	28.440	327	192	13	9	318	36	337	5.57e-28	112
MS.gene20879.t1	AT1G60980	27.964	329	186	12	12	318	49	348	6.65e-28	112
MS.gene20879.t1	AT1G44090	27.327	333	202	11	20	335	63	372	7.04e-28	112
MS.gene20879.t1	AT3G12900	27.184	309	181	9	23	318	59	336	9.55e-28	112
MS.gene20879.t1	AT5G63590	28.213	319	200	9	8	319	2	298	1.02e-27	110
MS.gene20879.t1	AT1G06620	28.840	319	176	10	20	320	62	347	2.20e-27	110
MS.gene20879.t1	AT4G25300	28.963	328	200	11	20	337	52	356	6.43e-27	109
MS.gene20879.t1	AT3G61400	25.740	338	204	8	20	337	60	370	6.78e-27	109
MS.gene20879.t1	AT4G21200	27.711	332	179	13	6	320	28	315	7.58e-27	108
MS.gene20879.t1	AT1G50960	28.349	321	186	9	12	322	32	318	9.07e-27	108
MS.gene20879.t1	AT5G43450	27.329	322	183	12	20	324	61	348	1.04e-26	108
MS.gene20879.t1	AT1G17010	26.866	335	200	11	20	338	54	359	2.52e-26	108
MS.gene20879.t1	AT5G43935	28.852	305	170	9	20	318	19	282	5.24e-26	105
MS.gene20879.t1	AT5G43440	25.562	356	213	12	3	337	41	365	8.25e-26	106
MS.gene20879.t1	AT2G30840	28.107	338	191	11	20	337	57	362	8.32e-26	106
MS.gene20879.t1	AT2G30830	28.571	336	205	10	13	337	47	358	9.90e-26	106
MS.gene20879.t1	AT1G78550	28.188	298	185	9	45	337	5	278	1.15e-25	104
MS.gene20879.t1	AT4G21690	28.173	323	189	11	14	321	41	335	1.19e-25	105
MS.gene20879.t1	AT1G62380	26.935	323	192	12	16	327	3	292	1.27e-25	105
MS.gene20879.t1	AT2G44800	28.302	318	184	9	15	318	47	334	8.33e-25	103
MS.gene20879.t1	AT4G25310	28.431	306	184	11	39	337	76	353	1.39e-24	103
MS.gene20879.t1	AT3G19000	29.057	265	148	9	20	265	32	275	1.48e-24	101
MS.gene20879.t1	AT1G77330	26.415	318	184	11	18	318	1	285	1.84e-24	102
MS.gene20879.t1	AT5G59540	28.319	339	189	11	20	337	61	366	2.18e-24	102
MS.gene20879.t1	AT1G03400	25.816	337	198	10	16	337	52	351	2.20e-24	102
MS.gene20879.t1	AT1G12010	27.445	317	194	11	18	327	5	292	3.76e-24	101
MS.gene20879.t1	AT2G25450	26.966	356	196	12	4	337	46	359	3.09e-23	99.4
MS.gene20879.t1	AT1G05010	26.214	309	191	10	28	327	16	296	3.14e-23	99.0
MS.gene20879.t1	AT1G03410	25.138	362	202	14	6	337	39	361	3.70e-23	99.4
MS.gene20879.t1	AT1G04350	26.163	344	197	12	15	337	53	360	6.10e-23	98.6
MS.gene20879.t1	AT3G50210	27.113	284	173	7	30	298	32	296	6.48e-23	98.2
MS.gene20879.t1	AT3G50210	27.113	284	173	7	30	298	32	296	6.48e-23	98.2
MS.gene20879.t1	AT3G50210	27.113	284	173	7	30	298	32	296	6.48e-23	98.2
MS.gene20879.t1	AT1G03410	25.138	362	202	14	6	337	76	398	7.23e-23	99.0
MS.gene20879.t1	AT3G60290	26.752	314	194	9	15	318	47	334	1.09e-22	97.8
MS.gene20879.t1	AT1G52820	26.780	295	181	6	36	324	36	301	1.12e-22	97.1
MS.gene20879.t1	AT5G63595	26.421	299	172	7	6	299	11	266	1.15e-22	96.3
MS.gene20879.t1	AT5G51810	29.688	256	146	9	18	262	61	293	2.89e-22	95.5
MS.gene20879.t1	AT4G25420	29.572	257	143	9	18	259	59	292	2.92e-22	95.5
MS.gene20879.t1	AT3G49630	25.974	308	175	9	20	298	9	292	8.55e-22	95.1
MS.gene20879.t1	AT3G49620	25.714	315	181	8	20	305	34	324	1.06e-21	95.1
MS.gene20879.t1	AT2G30840	27.515	338	187	12	20	337	57	356	1.26e-21	94.7
MS.gene20879.t1	AT3G49630	26.298	289	171	8	28	298	24	288	1.38e-21	94.4
MS.gene20879.t1	AT5G20400	27.393	303	185	10	20	311	45	323	3.78e-21	93.2
MS.gene20879.t1	AT1G06650	27.684	354	199	15	4	337	53	369	3.80e-21	93.6
MS.gene20879.t1	AT1G06645	25.806	341	192	12	20	337	77	379	8.27e-21	92.8
MS.gene20879.t1	AT2G19590	25.862	348	199	14	14	344	5	310	1.20e-20	91.3
MS.gene20879.t1	AT4G16330	25.912	274	163	10	61	324	1	244	1.21e-20	90.5
MS.gene20879.t1	AT1G49390	26.885	305	190	9	20	314	45	326	1.28e-20	92.0
MS.gene20879.t1	AT1G14130	27.832	309	177	12	17	314	6	279	1.35e-20	91.3
MS.gene20879.t1	AT1G06640	26.124	356	202	14	4	337	53	369	3.20e-20	90.9
MS.gene20879.t1	AT3G51240	28.821	229	135	8	123	349	64	266	4.08e-20	89.4
MS.gene20879.t1	AT5G20550	28.197	305	183	11	20	312	45	325	4.28e-20	90.5
MS.gene20879.t1	AT3G19010	26.996	263	149	11	20	262	28	267	7.35e-20	89.0
MS.gene20879.t1	AT3G55970	29.339	242	146	8	22	259	62	282	3.13e-19	87.0
MS.gene20879.t1	AT5G51310	27.148	291	156	11	20	286	5	263	3.89e-19	87.4
MS.gene20879.t1	AT4G25300	36.296	135	83	3	205	337	129	262	2.57e-18	84.0
MS.gene20879.t1	AT4G03070	24.695	328	213	7	20	335	14	319	3.56e-18	84.3
MS.gene20879.t1	AT5G63580	31.474	251	138	9	17	259	16	240	3.65e-18	83.2
MS.gene20879.t1	AT1G49390	26.667	270	171	8	49	314	1	247	4.60e-18	83.2
MS.gene20879.t1	AT5G63580	31.325	249	137	9	17	257	16	238	1.14e-17	82.0
MS.gene20879.t1	AT4G25310	25.902	305	165	10	39	337	76	325	1.41e-17	82.8
MS.gene20879.t1	AT5G58660	25.301	332	194	12	16	324	30	330	1.62e-17	82.8
MS.gene20879.t1	AT4G23340	24.194	310	202	10	17	318	7	291	2.52e-17	82.0
MS.gene20879.t1	AT1G14120	26.246	301	186	8	20	314	8	278	2.18e-16	79.3
MS.gene20879.t1	AT1G14120	26.246	301	186	8	20	314	8	278	2.18e-16	79.3
MS.gene20879.t1	AT1G14120	26.246	301	186	8	20	314	8	278	2.18e-16	79.3
MS.gene20879.t1	AT5G05600	29.134	254	147	10	17	259	59	290	2.60e-16	78.6
MS.gene20879.t1	AT5G07480	23.582	335	217	10	20	338	44	355	1.28e-15	77.4
MS.gene20879.t1	AT1G28030	28.070	285	176	9	36	315	37	297	3.95e-15	75.9
MS.gene20879.t1	AT2G19590	34.286	140	81	6	209	344	163	295	1.10e-14	73.9
MS.gene20879.t1	AT5G54000	26.552	290	179	10	29	311	62	324	1.19e-14	74.7
MS.gene20879.t1	AT4G03050	34.211	114	74	1	203	315	269	382	1.30e-14	74.7
MS.gene20879.t1	AT4G03050	34.211	114	74	1	203	315	269	382	1.30e-14	74.7
MS.gene20879.t1	AT5G43450	26.087	253	139	11	20	258	61	279	5.56e-14	72.0
MS.gene20879.t1	AT4G22870	37.634	93	56	2	227	318	2	93	7.43e-14	67.8
MS.gene20879.t1	AT3G47190	23.511	319	195	12	14	319	26	308	1.45e-13	71.2
MS.gene20879.t1	AT4G23340	31.818	110	75	0	209	318	64	173	1.52e-13	69.3
MS.gene20879.t1	AT3G49630	26.554	177	108	3	123	298	64	219	2.51e-13	69.7
MS.gene20879.t1	AT1G52790	26.471	306	186	10	20	313	5	283	3.94e-13	69.7
MS.gene20879.t1	AT4G22870	37.349	83	51	1	237	318	52	134	4.27e-13	66.6
MS.gene20879.t1	AT5G43440	24.542	273	158	10	3	258	41	282	7.20e-13	68.6
MS.gene20879.t1	AT1G80320	31.624	117	77	2	197	313	175	288	8.26e-13	68.9
MS.gene20879.t1	AT3G50210	26.554	177	113	3	123	298	54	214	1.33e-12	67.4
MS.gene20879.t1	AT5G54000	25.556	270	168	9	49	311	1	244	1.69e-12	67.4
MS.gene20879.t1	AT1G52800	23.625	309	198	7	16	313	6	287	3.37e-12	67.0
MS.gene20879.t1	AT5G58660	25.188	266	156	10	16	259	30	274	5.58e-12	65.9
MS.gene20879.t1	AT5G12270	25.949	316	185	12	20	318	56	339	1.18e-11	65.5

Find 92 sgRNAs with CRISPR-Local

Find 253 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATTATTATTATTGGTATTT+TGG	0.091907	1.3:+61294784	None:intergenic
GAAATTAAGCAACGATAATT+TGG	0.177216	1.3:-61294820	MS.gene20879:CDS
AATAATAATACTATTGGTTT+TGG	0.205406	1.3:-61294765	MS.gene20879:CDS
GATCTCTCAGAGATTGAATT+AGG	0.224819	1.3:+61297134	None:intergenic
CATATGCTGCTTGTTTATAT+TGG	0.231164	1.3:+61294277	None:intergenic
TTATGGGCTGTCACCATCTT+TGG	0.253047	1.3:+61294330	None:intergenic
AATCAATACCTGAACTTGAT+AGG	0.279380	1.3:+61297089	None:intergenic
GCTGGTACTTCTACTCCTTT+TGG	0.281710	1.3:-61297227	MS.gene20879:CDS
ATATGCTGCTTGTTTATATT+GGG	0.296422	1.3:+61294278	None:intergenic
AAAGTACATCATTGACATTC+TGG	0.322538	1.3:+61294389	None:intergenic
GTGAAAGCTTGCGAAGAATA+TGG	0.329647	1.3:-61297353	MS.gene20879:CDS
ATTGGACCCAATGGTGATAA+AGG	0.344802	1.3:-61297188	MS.gene20879:CDS
AACCTTGAAATAACCTCCTT+TGG	0.350413	1.3:+61297302	None:intergenic
CATGGTTGGAGATGCCCTTC+AGG	0.361510	1.3:-61294622	MS.gene20879:intron
GCTTATACAGAGATGGGTTA+TGG	0.366168	1.3:+61294313	None:intergenic
TTGCAGCACCACCGTTGAAT+TGG	0.378378	1.3:-61294368	MS.gene20879:CDS
TTAGTTCTTATCATGGAAGT+TGG	0.398200	1.3:+61297446	None:intergenic
AACCATGACATAGAATTCAT+TGG	0.407705	1.3:+61294638	None:intergenic
TCATTGGGGTCAGGAGGGAC+AGG	0.413351	1.3:+61294654	None:intergenic
AAGGTCACCTTTATCACCAT+TGG	0.417878	1.3:+61297181	None:intergenic
CTTATACAGAGATGGGTTAT+GGG	0.418310	1.3:+61294314	None:intergenic
TTTATATTGGGCCCATGTAA+AGG	0.421234	1.3:+61294290	None:intergenic
AAGATCACCCTATCAAGTTC+AGG	0.426140	1.3:-61297097	MS.gene20879:intron
ACCATGACATAGAATTCATT+GGG	0.428603	1.3:+61294639	None:intergenic
GTCAGAGTTGTCGGAATTAG+TGG	0.431588	1.3:-61297375	MS.gene20879:CDS
TTGCTTAGTGAGGACTTGTC+AGG	0.433510	1.3:+61294906	None:intergenic
TTATATTGGGCCCATGTAAA+GGG	0.438267	1.3:+61294291	None:intergenic
TTGCTTAATTTCTTCACCAC+TGG	0.441506	1.3:+61294831	None:intergenic
CAGCACCACCGTTGAATTGG+TGG	0.442817	1.3:-61294365	MS.gene20879:CDS
TTGAATTAGGATTGGTGTGA+AGG	0.443442	1.3:+61297147	None:intergenic
CTGAAGGCCACCTACGTTGT+TGG	0.445461	1.3:+61294704	None:intergenic
AGGTCACCTTTATCACCATT+GGG	0.458981	1.3:+61297182	None:intergenic
ATTTCAAGGTTGGAAAATGA+AGG	0.459537	1.3:-61297290	MS.gene20879:CDS
TGTTGGACCGTAAGATGGTT+AGG	0.459968	1.3:+61294721	None:intergenic
AAAGGAGGTTATTTCAAGGT+TGG	0.461082	1.3:-61297300	MS.gene20879:CDS
CATGGAAAGGTCAGAGTTGT+CGG	0.463043	1.3:-61297384	MS.gene20879:CDS
CTCTGTATAAGCCCTTTACA+TGG	0.465843	1.3:-61294302	MS.gene20879:CDS
AAGTACATCATTGACATTCT+GGG	0.473047	1.3:+61294390	None:intergenic
CTTAATTTCTTCACCACTGG+AGG	0.473489	1.3:+61294834	None:intergenic
GCAGCATATGCTCTTCGATT+GGG	0.481007	1.3:-61294264	MS.gene20879:CDS
CTCAGAGATTGAATTAGGAT+TGG	0.483436	1.3:+61297139	None:intergenic
AGCTTGAAGTTTCTCTGAAG+AGG	0.485344	1.3:+61297247	None:intergenic
AACTAAGAAAACAAAGGCTG+TGG	0.487022	1.3:-61297429	MS.gene20879:CDS
GAGGGTAGTGATTGATCCTA+AGG	0.497490	1.3:+61294853	None:intergenic
CTCAGATCCTAACCATCTTA+CGG	0.499569	1.3:-61294728	MS.gene20879:CDS
GCTGTCACCATCTTTGGTAG+TGG	0.502012	1.3:+61294336	None:intergenic
CGACAACTCTGACCTTTCCA+TGG	0.502830	1.3:+61297385	None:intergenic
AGCTAGCAGCAGAAGGATTG+TGG	0.505422	1.3:-61294932	MS.gene20879:CDS
ACATAGAATTCATTGGGGTC+AGG	0.505645	1.3:+61294645	None:intergenic
TTTCAACTCAACACGGATTG+TGG	0.506381	1.3:-61294680	MS.gene20879:CDS
TACGTTGTTGGACCGTAAGA+TGG	0.520994	1.3:+61294716	None:intergenic
AATGAATTCTATGTCATGGT+TGG	0.521607	1.3:-61294636	MS.gene20879:CDS
ATCAATACCTGAACTTGATA+GGG	0.523789	1.3:+61297090	None:intergenic
TACCAAAGGAGGTTATTTCA+AGG	0.524646	1.3:-61297304	MS.gene20879:CDS
AGCAGCATATGCTCTTCGAT+TGG	0.527953	1.3:-61294265	MS.gene20879:CDS
TTCATAGTGACTCAGTCCTT+AGG	0.533667	1.3:-61294869	MS.gene20879:CDS
TAAAGGGCTTATACAGAGAT+GGG	0.538122	1.3:+61294307	None:intergenic
TTTGATAACTTTGCTTAGTG+AGG	0.543907	1.3:+61294896	None:intergenic
TCCGACGATTGACCTTTCCA+TGG	0.544793	1.3:-61297402	MS.gene20879:CDS
GTAAAGGGCTTATACAGAGA+TGG	0.547882	1.3:+61294306	None:intergenic
TTCAAATGTCATGGTGATGA+TGG	0.550871	1.3:+61294193	None:intergenic
GCTAGCAGCAGAAGGATTGT+GGG	0.554208	1.3:-61294931	MS.gene20879:CDS
CGATTGACCTTTCCATGGAA+AGG	0.558324	1.3:-61297397	MS.gene20879:CDS
GATCAGTCCACTACCAAAGA+TGG	0.562254	1.3:-61294343	MS.gene20879:CDS
TGTGAAGGAGAAGATATTCA+AGG	0.564167	1.3:+61297162	None:intergenic
CGTAAGATGGTTAGGATCTG+AGG	0.566286	1.3:+61294729	None:intergenic
CGTGTTGAGTTGAAATCTGA+AGG	0.568746	1.3:+61294688	None:intergenic
ATTCTTGAGCTAGCAGCAGA+AGG	0.570873	1.3:-61294939	MS.gene20879:CDS
CTTCAGATTTCAACTCAACA+CGG	0.572393	1.3:-61294687	MS.gene20879:CDS
CTTATCATGGAAGTTGGAGA+AGG	0.576753	1.3:+61297452	None:intergenic
TAGAATTCATTGGGGTCAGG+AGG	0.581879	1.3:+61294648	None:intergenic
TGCTTAGTGAGGACTTGTCA+GGG	0.582733	1.3:+61294907	None:intergenic
CATTGGGGTCAGGAGGGACA+GGG	0.599597	1.3:+61294655	None:intergenic
ACTCTGACCTTTCCATGGAA+AGG	0.602052	1.3:+61297390	None:intergenic
AGAATTCATTGGGGTCAGGA+GGG	0.609175	1.3:+61294649	None:intergenic
ACTAAGAAAACAAAGGCTGT+GGG	0.611470	1.3:-61297428	MS.gene20879:CDS
GGACTGATCCACCAATTCAA+CGG	0.614461	1.3:+61294357	None:intergenic
GGTGAATCATGGTGTACCAA+AGG	0.617583	1.3:-61297318	MS.gene20879:CDS
GAATCATGGTGTACCAAAGG+AGG	0.626765	1.3:-61297315	MS.gene20879:CDS
TGATAGTGATTCAAATGTCA+TGG	0.627752	1.3:+61294184	None:intergenic
TTAATTTCTTCACCACTGGA+GGG	0.630951	1.3:+61294835	None:intergenic
TCCATGGAAAGGTCAATCGT+CGG	0.635405	1.3:+61297401	None:intergenic
TCTGTATAAGCCCTTTACAT+GGG	0.636711	1.3:-61294301	MS.gene20879:CDS
TAGAAAGCAAGTAACCTGAA+GGG	0.637091	1.3:+61294608	None:intergenic
TCTTCAGAGAAACTTCAAGC+TGG	0.641136	1.3:-61297245	MS.gene20879:CDS
CCCCAATGAATTCTATGTCA+TGG	0.644997	1.3:-61294640	MS.gene20879:CDS
GATAAGAACTAAGAAAACAA+AGG	0.645933	1.3:-61297435	MS.gene20879:CDS
TTACGGTCCAACAACGTAGG+TGG	0.658172	1.3:-61294711	MS.gene20879:CDS
GATCAATCACTACCCTCCAG+TGG	0.695871	1.3:-61294847	MS.gene20879:CDS
CTGATCCACCAATTCAACGG+TGG	0.709914	1.3:+61294360	None:intergenic
ATCTTACGGTCCAACAACGT+AGG	0.710077	1.3:-61294714	MS.gene20879:CDS
CCATGACATAGAATTCATTG+GGG	0.740303	1.3:+61294640	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAGAAAAATGTATAAATAAA+GGG	+	chr1.3:61296365-61296384	None:intergenic	10.0%
!!	TAAGAAAAATGTATAAATAA+AGG	+	chr1.3:61296366-61296385	None:intergenic	10.0%
!!	TAATATATGAAGTAATATAT+AGG	-	chr1.3:61294754-61294773	MS.gene20879:CDS	10.0%
!!!	GTAATTAAAATAAATTTTTC+TGG	+	chr1.3:61295076-61295095	None:intergenic	10.0%
!!!	TATTATTATTATTGGTATTT+TGG	+	chr1.3:61296874-61296893	None:intergenic	10.0%
!!	AAACATTGATATTCTATATT+TGG	-	chr1.3:61294868-61294887	MS.gene20879:CDS	15.0%
!!	AAAGTGAAATATATTGTATT+GGG	+	chr1.3:61296341-61296360	None:intergenic	15.0%
!!	AACATAATGATAAAAAAAGT+GGG	-	chr1.3:61294672-61294691	MS.gene20879:CDS	15.0%
!!	AACATTGATATTCTATATTT+GGG	-	chr1.3:61294869-61294888	MS.gene20879:CDS	15.0%
!!	AATTAGAGTTATATTGTATT+GGG	+	chr1.3:61296300-61296319	None:intergenic	15.0%
!!	AGAAAAATGTATAAATAAAG+GGG	+	chr1.3:61296364-61296383	None:intergenic	15.0%
!!	ATAATAAATTCAATTCAATC+AGG	-	chr1.3:61295602-61295621	MS.gene20879:intron	15.0%
!!	ATCTTAAACTTAATTGAATA+TGG	-	chr1.3:61295650-61295669	MS.gene20879:intron	15.0%
!!	ATTGAAATGAAGAAAATAAA+AGG	+	chr1.3:61296481-61296500	None:intergenic	15.0%
!!	GATGATATTTAATGATTTAA+TGG	-	chr1.3:61295899-61295918	MS.gene20879:intron	15.0%
!!	TAAAGCAATATCAAATTAAT+TGG	+	chr1.3:61294651-61294670	None:intergenic	15.0%
!!	TAACATAATGATAAAAAAAG+TGG	-	chr1.3:61294671-61294690	MS.gene20879:CDS	15.0%
!!	TAATTAGAGTTATATTGTAT+TGG	+	chr1.3:61296301-61296320	None:intergenic	15.0%
!!!	AATAATAATACTATTGGTTT+TGG	-	chr1.3:61296890-61296909	MS.gene20879:intron	15.0%
!!!	TTAGTTTTCTTTGTTAATTA+AGG	-	chr1.3:61295564-61295583	MS.gene20879:intron	15.0%
!!!	TTTTATTTCCATATATATTG+CGG	-	chr1.3:61294908-61294927	MS.gene20879:CDS	15.0%
!!	ACATAATGATAAAAAAAGTG+GGG	-	chr1.3:61294673-61294692	MS.gene20879:CDS	20.0%
!!	ATGAAGTAATATATAGGTTA+GGG	-	chr1.3:61294760-61294779	MS.gene20879:CDS	20.0%
!!	GAAAGTGAAATATATTGTAT+TGG	+	chr1.3:61296342-61296361	None:intergenic	20.0%
!!	GAATTATATCTAATTGTGTA+TGG	+	chr1.3:61295856-61295875	None:intergenic	20.0%
!!	GATATTTAATGATTTAATGG+TGG	-	chr1.3:61295902-61295921	MS.gene20879:intron	20.0%
!!	TATGAAGTAATATATAGGTT+AGG	-	chr1.3:61294759-61294778	MS.gene20879:CDS	20.0%
!!!	ATTGATTGGTTTAATTTCTT+TGG	+	chr1.3:61296130-61296149	None:intergenic	20.0%
!!!	GACACTTTTTTTTAGAAAAT+GGG	+	chr1.3:61296231-61296250	None:intergenic	20.0%
!!!	TAAATTTTTCTGGTATGATT+TGG	+	chr1.3:61295066-61295085	None:intergenic	20.0%
!!!	TATTTGAATCTTTTTAGAAG+AGG	+	chr1.3:61295521-61295540	None:intergenic	20.0%
!!!	TTAACATAATGGATTCATTT+GGG	-	chr1.3:61295220-61295239	MS.gene20879:intron	20.0%
!!!	TTGATTGGTTTAATTTCTTT+GGG	+	chr1.3:61296129-61296148	None:intergenic	20.0%
!	AAATGTTACCGCAATATATA+TGG	+	chr1.3:61294919-61294938	None:intergenic	25.0%
!	AATAAGATAGTGTTGTATCA+TGG	+	chr1.3:61295935-61295954	None:intergenic	25.0%
!	ACAATGAATCGAATTATGAA+TGG	+	chr1.3:61297080-61297099	None:intergenic	25.0%
!	ATAAATTCAATTCAATCAGG+AGG	-	chr1.3:61295605-61295624	MS.gene20879:intron	25.0%
!	ATAAGATAGTGTTGTATCAT+GGG	+	chr1.3:61295934-61295953	None:intergenic	25.0%
!	ATGATACAACACTATCTTAT+TGG	-	chr1.3:61295934-61295953	MS.gene20879:intron	25.0%
!	ATTGATATTCTATATTTGGG+TGG	-	chr1.3:61294872-61294891	MS.gene20879:CDS	25.0%
!	CACAATCAAATCAAGAATAT+AGG	-	chr1.3:61296450-61296469	MS.gene20879:intron	25.0%
!	CACTATTGAATTGAATTGAT+TGG	+	chr1.3:61296179-61296198	None:intergenic	25.0%
!	CATAATGATAAAAAAAGTGG+GGG	-	chr1.3:61294674-61294693	MS.gene20879:CDS	25.0%
!	CATCTCATTTGATCTAATAA+TGG	+	chr1.3:61295878-61295897	None:intergenic	25.0%
!	CTATACATATTACATCAAGA+AGG	+	chr1.3:61295125-61295144	None:intergenic	25.0%
!	GAAATTAAGCAACGATAATT+TGG	-	chr1.3:61296835-61296854	MS.gene20879:intron	25.0%
!	GATAAGAACTAAGAAAACAA+AGG	-	chr1.3:61294220-61294239	MS.gene20879:CDS	25.0%
!	GGAAAAAAAATGTTAGTAAC+AGG	+	chr1.3:61295385-61295404	None:intergenic	25.0%
!	TTATATCTAATTGTGTATGG+TGG	+	chr1.3:61295853-61295872	None:intergenic	25.0%
!!	ATATGCTGCTTGTTTATATT+GGG	+	chr1.3:61297380-61297399	None:intergenic	25.0%
!!	GCATAATTAAGCATTACTTT+TGG	-	chr1.3:61295772-61295791	MS.gene20879:intron	25.0%
!!	TGGTATGATTTGGAATATAA+AGG	+	chr1.3:61295056-61295075	None:intergenic	25.0%
!!	TTGAAATGACTCAGTTATTT+TGG	+	chr1.3:61296254-61296273	None:intergenic	25.0%
!!!	AGAATATGGTTTTTTTAAGG+TGG	-	chr1.3:61294316-61294335	MS.gene20879:CDS	25.0%
!!!	CGAAGAATATGGTTTTTTTA+AGG	-	chr1.3:61294313-61294332	MS.gene20879:CDS	25.0%
!!!	GGACACTTTTTTTTAGAAAA+TGG	+	chr1.3:61296232-61296251	None:intergenic	25.0%
!!!	GTTAACATAATGGATTCATT+TGG	-	chr1.3:61295219-61295238	MS.gene20879:intron	25.0%
!!!	TGAAATGACTCAGTTATTTT+GGG	+	chr1.3:61296253-61296272	None:intergenic	25.0%
!!!	TGATTGGTTTAATTTCTTTG+GGG	+	chr1.3:61296128-61296147	None:intergenic	25.0%
!!!	TGGTATTTTGGAATTTTGAT+GGG	+	chr1.3:61296862-61296881	None:intergenic	25.0%
!!!	TGTGTTTTTTTCTTTTGTGT+AGG	-	chr1.3:61297183-61297202	MS.gene20879:CDS	25.0%
!!!	TGTTTTCTTAGTTCTTATCA+TGG	+	chr1.3:61294219-61294238	None:intergenic	25.0%
!!!	TTAGAAGAGGTATCTATATT+CGG	+	chr1.3:61295508-61295527	None:intergenic	25.0%
!!!	TTGGTATTTTGGAATTTTGA+TGG	+	chr1.3:61296863-61296882	None:intergenic	25.0%
	AAAAATAACCTAGCTCGATA+TGG	+	chr1.3:61295988-61296007	None:intergenic	30.0%
	AAAGTACATCATTGACATTC+TGG	+	chr1.3:61297269-61297288	None:intergenic	30.0%
	AACCATGACATAGAATTCAT+TGG	+	chr1.3:61297020-61297039	None:intergenic	30.0%
	AAGTACATCATTGACATTCT+GGG	+	chr1.3:61297268-61297287	None:intergenic	30.0%
	AATATATAGGTTAGGGAACA+AGG	-	chr1.3:61294767-61294786	MS.gene20879:CDS	30.0%
	AATCAATACCTGAACTTGAT+AGG	+	chr1.3:61294569-61294588	None:intergenic	30.0%
	AATGAATTCTATGTCATGGT+TGG	-	chr1.3:61297019-61297038	MS.gene20879:intron	30.0%
	ACCATGACATAGAATTCATT+GGG	+	chr1.3:61297019-61297038	None:intergenic	30.0%
	ACTATAATAACGCAGATTGA+GGG	-	chr1.3:61294718-61294737	MS.gene20879:CDS	30.0%
	ATCAATACCTGAACTTGATA+GGG	+	chr1.3:61294568-61294587	None:intergenic	30.0%
	ATTTCAAGGTTGGAAAATGA+AGG	-	chr1.3:61294365-61294384	MS.gene20879:CDS	30.0%
	CAAAAGGTTGGAATGAAAAA+AGG	-	chr1.3:61294939-61294958	MS.gene20879:CDS	30.0%
	CCATTATGTTAACATCAGAA+TGG	+	chr1.3:61295212-61295231	None:intergenic	30.0%
	CCATTCTGATGTTAACATAA+TGG	-	chr1.3:61295209-61295228	MS.gene20879:intron	30.0%
	GATAACAAAAAGAACTGTGA+AGG	-	chr1.3:61294964-61294983	MS.gene20879:CDS	30.0%
	TAAAGATCTTCCATTCACTT+TGG	-	chr1.3:61296101-61296120	MS.gene20879:intron	30.0%
	TACTATAATAACGCAGATTG+AGG	-	chr1.3:61294717-61294736	MS.gene20879:CDS	30.0%
	TATTGCGGTAACATTTCAAA+AGG	-	chr1.3:61294923-61294942	MS.gene20879:CDS	30.0%
	TTATGCTTGTATCCTAGATA+GGG	-	chr1.3:61295022-61295041	MS.gene20879:intron	30.0%
	TTCTACACCTTTCAATTAGT+TGG	-	chr1.3:61295183-61295202	MS.gene20879:intron	30.0%
	TTGGCATAATATCTTGCATA+TGG	-	chr1.3:61296006-61296025	MS.gene20879:intron	30.0%
	TTTATGCTTGTATCCTAGAT+AGG	-	chr1.3:61295021-61295040	MS.gene20879:intron	30.0%
!	AACACAAACCAATGTGATTT+TGG	+	chr1.3:61295320-61295339	None:intergenic	30.0%
!	CATATGCTGCTTGTTTATAT+TGG	+	chr1.3:61297381-61297400	None:intergenic	30.0%
!	TGCCTAATGTCATAAGTTTT+GGG	+	chr1.3:61295695-61295714	None:intergenic	30.0%
!	TTAGTTCTTATCATGGAAGT+TGG	+	chr1.3:61294212-61294231	None:intergenic	30.0%
!	TTTGATAACTTTGCTTAGTG+AGG	+	chr1.3:61296762-61296781	None:intergenic	30.0%
!!	ATATCGAGCTAGGTTATTTT+TGG	-	chr1.3:61295987-61296006	MS.gene20879:intron	30.0%
!!	TATGTATAGTTGTTTTCTCG+TGG	-	chr1.3:61295136-61295155	MS.gene20879:intron	30.0%
!!	TTGTGTAGGTTTTGACAAAT+GGG	-	chr1.3:61297197-61297216	MS.gene20879:CDS	30.0%
!!	TTTGTGTAGGTTTTGACAAA+TGG	-	chr1.3:61297196-61297215	MS.gene20879:CDS	30.0%
!!!	TTTTTTAAGGTGGTGAATCA+TGG	-	chr1.3:61294326-61294345	MS.gene20879:CDS	30.0%
	AAAGTAATCCATATCGAGCT+AGG	-	chr1.3:61295977-61295996	MS.gene20879:intron	35.0%
	AACCTTGAAATAACCTCCTT+TGG	+	chr1.3:61294356-61294375	None:intergenic	35.0%
	AACTAAGAAAACAAAGGCTG+TGG	-	chr1.3:61294226-61294245	MS.gene20879:CDS	35.0%
	AAGGAAAAATGTCCCTATCT+AGG	+	chr1.3:61295037-61295056	None:intergenic	35.0%
	AATTCAATTCAATCAGGAGG+AGG	-	chr1.3:61295608-61295627	MS.gene20879:intron	35.0%
	ACAAAAAGAACTGTGAAGGA+AGG	-	chr1.3:61294968-61294987	MS.gene20879:CDS	35.0%
	ACACGCAATGAGTTATTGAT+TGG	+	chr1.3:61296144-61296163	None:intergenic	35.0%
	ACTAAGAAAACAAAGGCTGT+GGG	-	chr1.3:61294227-61294246	MS.gene20879:CDS	35.0%
	ATGGTCTCCAACTAATTGAA+AGG	+	chr1.3:61295193-61295212	None:intergenic	35.0%
	CAACGTTGCTAAATATTAGC+CGG	+	chr1.3:61296544-61296563	None:intergenic	35.0%
	CACTTGTACCAAAATCACAT+TGG	-	chr1.3:61295309-61295328	MS.gene20879:intron	35.0%
	CATATTACATCAAGAAGGTG+AGG	+	chr1.3:61295120-61295139	None:intergenic	35.0%
	CCATGACATAGAATTCATTG+GGG	+	chr1.3:61297018-61297037	None:intergenic	35.0%
	CTATAATAACGCAGATTGAG+GGG	-	chr1.3:61294719-61294738	MS.gene20879:CDS	35.0%
	CTCAGAGATTGAATTAGGAT+TGG	+	chr1.3:61294519-61294538	None:intergenic	35.0%
	CTTCAGATTTCAACTCAACA+CGG	-	chr1.3:61296968-61296987	MS.gene20879:intron	35.0%
	GATCTCTCAGAGATTGAATT+AGG	+	chr1.3:61294524-61294543	None:intergenic	35.0%
	GGTTATGGCTGCAAAAATAT+TGG	-	chr1.3:61294449-61294468	MS.gene20879:CDS	35.0%
	TAAAGGGCTTATACAGAGAT+GGG	+	chr1.3:61297351-61297370	None:intergenic	35.0%
	TACAAACAAAGTCAGAGACA+GGG	+	chr1.3:61295266-61295285	None:intergenic	35.0%
	TAGAAAGCAAGTAACCTGAA+GGG	+	chr1.3:61297050-61297069	None:intergenic	35.0%
	TCTGTATAAGCCCTTTACAT+GGG	-	chr1.3:61297354-61297373	MS.gene20879:CDS	35.0%
	TGCAAAAATATTGGACCCAA+TGG	-	chr1.3:61294458-61294477	MS.gene20879:intron	35.0%
	TGGTGGTATATGTATCAACT+TGG	-	chr1.3:61295479-61295498	MS.gene20879:intron	35.0%
	TGTGAAGGAGAAGATATTCA+AGG	+	chr1.3:61294496-61294515	None:intergenic	35.0%
	TTAATTTCTTCACCACTGGA+GGG	+	chr1.3:61296823-61296842	None:intergenic	35.0%
	TTAGAAAGCAAGTAACCTGA+AGG	+	chr1.3:61297051-61297070	None:intergenic	35.0%
	TTATATTGGGCCCATGTAAA+GGG	+	chr1.3:61297367-61297386	None:intergenic	35.0%
	TTGCTTAATTTCTTCACCAC+TGG	+	chr1.3:61296827-61296846	None:intergenic	35.0%
	TTTATATTGGGCCCATGTAA+AGG	+	chr1.3:61297368-61297387	None:intergenic	35.0%
	TTTGGTACAAGTGAGGATAA+TGG	+	chr1.3:61295302-61295321	None:intergenic	35.0%
!	AAAGGAGGTTATTTCAAGGT+TGG	-	chr1.3:61294355-61294374	MS.gene20879:CDS	35.0%
!	CAAACTGACTCAGATAAAAC+GGG	-	chr1.3:61296401-61296420	MS.gene20879:intron	35.0%
!	CCAAACTGACTCAGATAAAA+CGG	-	chr1.3:61296400-61296419	MS.gene20879:intron	35.0%
!	CTGCCTAATGTCATAAGTTT+TGG	+	chr1.3:61295696-61295715	None:intergenic	35.0%
!	CTTATAAGTCCTGTTACTTC+TGG	+	chr1.3:61295804-61295823	None:intergenic	35.0%
!	GCCTAATGTCATAAGTTTTG+GGG	+	chr1.3:61295694-61295713	None:intergenic	35.0%
!	TACCAAAGGAGGTTATTTCA+AGG	-	chr1.3:61294351-61294370	MS.gene20879:CDS	35.0%
!	TTGAATTAGGATTGGTGTGA+AGG	+	chr1.3:61294511-61294530	None:intergenic	35.0%
!	TTGTTTTCTCGTGGTTGATT+TGG	-	chr1.3:61295145-61295164	MS.gene20879:intron	35.0%
!	TTTTTGCAGCCATAACCAAA+AGG	+	chr1.3:61294446-61294465	None:intergenic	35.0%
!!	ACTTCTACTCCTTTTGGTTA+TGG	-	chr1.3:61294434-61294453	MS.gene20879:CDS	35.0%
!!	ATGTGATTTTGGTACAAGTG+AGG	+	chr1.3:61295309-61295328	None:intergenic	35.0%
!!	CCTAATGTCATAAGTTTTGG+GGG	+	chr1.3:61295693-61295712	None:intergenic	35.0%
!!	CTTATACAGAGATGGGTTAT+GGG	+	chr1.3:61297344-61297363	None:intergenic	35.0%
!!	GTGATCTTTTGCTATGGTTT+TGG	+	chr1.3:61294546-61294565	None:intergenic	35.0%
!!!	GGCTATTGTCTTCTTGTTTT+TGG	+	chr1.3:61297444-61297463	None:intergenic	35.0%
	AAAGAACTGTGAAGGAAGGA+AGG	-	chr1.3:61294972-61294991	MS.gene20879:CDS	40.0%
	AAAGTGGTGTATACCACGAA+TGG	-	chr1.3:61295459-61295478	MS.gene20879:intron	40.0%
	AAGATCACCCTATCAAGTTC+AGG	-	chr1.3:61294558-61294577	MS.gene20879:intron	40.0%
	AAGGTCACCTTTATCACCAT+TGG	+	chr1.3:61294477-61294496	None:intergenic	40.0%
	ACACATGTCACATTTGTGTG+TGG	-	chr1.3:61295431-61295450	MS.gene20879:intron	40.0%
	ACATAGAATTCATTGGGGTC+AGG	+	chr1.3:61297013-61297032	None:intergenic	40.0%
	AGGTCACCTTTATCACCATT+GGG	+	chr1.3:61294476-61294495	None:intergenic	40.0%
	ATTCAATCAGGAGGAGGTAA+CGG	-	chr1.3:61295614-61295633	MS.gene20879:intron	40.0%
	ATTGGACCCAATGGTGATAA+AGG	-	chr1.3:61294467-61294486	MS.gene20879:intron	40.0%
	CCCCAATGAATTCTATGTCA+TGG	-	chr1.3:61297015-61297034	MS.gene20879:intron	40.0%
	CCCCCAAAACTTATGACATT+AGG	-	chr1.3:61295690-61295709	MS.gene20879:intron	40.0%
	CGATGCAACTGCAAGAAAAT+TGG	+	chr1.3:61296655-61296674	None:intergenic	40.0%
	CTCAGATCCTAACCATCTTA+CGG	-	chr1.3:61296927-61296946	MS.gene20879:intron	40.0%
	CTCTGTATAAGCCCTTTACA+TGG	-	chr1.3:61297353-61297372	MS.gene20879:CDS	40.0%
	CTTAATTTCTTCACCACTGG+AGG	+	chr1.3:61296824-61296843	None:intergenic	40.0%
	CTTATCATGGAAGTTGGAGA+AGG	+	chr1.3:61294206-61294225	None:intergenic	40.0%
	GAAAATGGGTCAGATATTCC+AGG	+	chr1.3:61296217-61296236	None:intergenic	40.0%
	GAGTACCAAGTAAGAGGTTA+CGG	-	chr1.3:61295352-61295371	MS.gene20879:intron	40.0%
	GATACATATACCACCATTCG+TGG	+	chr1.3:61295475-61295494	None:intergenic	40.0%
	GCAACTGCAAGAAAATTGGA+AGG	+	chr1.3:61296651-61296670	None:intergenic	40.0%
	GCGGTAACATTTCAAAAGGT+TGG	-	chr1.3:61294927-61294946	MS.gene20879:CDS	40.0%
	GTAAAGGGCTTATACAGAGA+TGG	+	chr1.3:61297352-61297371	None:intergenic	40.0%
	GTACAAACAAAGTCAGAGAC+AGG	+	chr1.3:61295267-61295286	None:intergenic	40.0%
	GTGAAAGCTTGCGAAGAATA+TGG	-	chr1.3:61294302-61294321	MS.gene20879:CDS	40.0%
	GTGTTTCTTAAGTGTCAAGC+AGG	-	chr1.3:61294802-61294821	MS.gene20879:CDS	40.0%
	TCTTCAGAGAAACTTCAAGC+TGG	-	chr1.3:61294410-61294429	MS.gene20879:CDS	40.0%
	TTCATAGTGACTCAGTCCTT+AGG	-	chr1.3:61296786-61296805	MS.gene20879:intron	40.0%
	TTTGTGTGTGGAGGTTAAAG+TGG	-	chr1.3:61295443-61295462	MS.gene20879:intron	40.0%
!	AGCTTGAAGTTTCTCTGAAG+AGG	+	chr1.3:61294411-61294430	None:intergenic	40.0%
!	AGTCCTGTTACTTCTGGATA+AGG	+	chr1.3:61295798-61295817	None:intergenic	40.0%
!	CCGTTTTATCTGAGTCAGTT+TGG	+	chr1.3:61296403-61296422	None:intergenic	40.0%
!	GATAGGGTGATCTTTTGCTA+TGG	+	chr1.3:61294552-61294571	None:intergenic	40.0%
!	TTTCAACTCAACACGGATTG+TGG	-	chr1.3:61296975-61296994	MS.gene20879:intron	40.0%
!!	ACACATGGCTCTCTAAAGTT+CGG	+	chr1.3:61295409-61295428	None:intergenic	40.0%
!!	CGTGTTGAGTTGAAATCTGA+AGG	+	chr1.3:61296970-61296989	None:intergenic	40.0%
!!	GCTTATACAGAGATGGGTTA+TGG	+	chr1.3:61297345-61297364	None:intergenic	40.0%
!!	TCACAAGAGTACCAAGTAAG+AGG	-	chr1.3:61295346-61295365	MS.gene20879:intron	40.0%
!!	TGTAGGTTTTGACAAATGGG+AGG	-	chr1.3:61297200-61297219	MS.gene20879:CDS	40.0%
	ACTCTGACCTTTCCATGGAA+AGG	+	chr1.3:61294268-61294287	None:intergenic	45.0%
	AGAATTCATTGGGGTCAGGA+GGG	+	chr1.3:61297009-61297028	None:intergenic	45.0%
	AGCAGCATATGCTCTTCGAT+TGG	-	chr1.3:61297390-61297409	MS.gene20879:CDS	45.0%
	ATCTTACGGTCCAACAACGT+AGG	-	chr1.3:61296941-61296960	MS.gene20879:intron	45.0%
	ATGGGTCAGATATTCCAGGA+CGG	+	chr1.3:61296213-61296232	None:intergenic	45.0%
	ATGTGACATGTGTCCACACA+TGG	+	chr1.3:61295424-61295443	None:intergenic	45.0%
	ATTCTTGAGCTAGCAGCAGA+AGG	-	chr1.3:61296716-61296735	MS.gene20879:intron	45.0%
	CATGGAAAGGTCAGAGTTGT+CGG	-	chr1.3:61294271-61294290	MS.gene20879:CDS	45.0%
	CATGTCACATTTGTGTGTGG+AGG	-	chr1.3:61295434-61295453	MS.gene20879:intron	45.0%
	CGAATCCGTAACCTCTTACT+TGG	+	chr1.3:61295360-61295379	None:intergenic	45.0%
	CGATTGACCTTTCCATGGAA+AGG	-	chr1.3:61294258-61294277	MS.gene20879:CDS	45.0%
	CGTAAGATGGTTAGGATCTG+AGG	+	chr1.3:61296929-61296948	None:intergenic	45.0%
	CTGACTCAGATAAAACGGGA+CGG	-	chr1.3:61296405-61296424	MS.gene20879:intron	45.0%
	GAATCATGGTGTACCAAAGG+AGG	-	chr1.3:61294340-61294359	MS.gene20879:CDS	45.0%
	GAGGGTAGTGATTGATCCTA+AGG	+	chr1.3:61296805-61296824	None:intergenic	45.0%
	GATCAGTCCACTACCAAAGA+TGG	-	chr1.3:61297312-61297331	MS.gene20879:CDS	45.0%
	GCAGCATATGCTCTTCGATT+GGG	-	chr1.3:61297391-61297410	MS.gene20879:CDS	45.0%
	GGACTGATCCACCAATTCAA+CGG	+	chr1.3:61297301-61297320	None:intergenic	45.0%
	GGTGAATCATGGTGTACCAA+AGG	-	chr1.3:61294337-61294356	MS.gene20879:CDS	45.0%
	GTCAGAGTTGTCGGAATTAG+TGG	-	chr1.3:61294280-61294299	MS.gene20879:CDS	45.0%
	TACGTTGTTGGACCGTAAGA+TGG	+	chr1.3:61296942-61296961	None:intergenic	45.0%
	TAGAATTCATTGGGGTCAGG+AGG	+	chr1.3:61297010-61297029	None:intergenic	45.0%
	TCCATGGAAAGGTCAATCGT+CGG	+	chr1.3:61294257-61294276	None:intergenic	45.0%
	TGCTTAGTGAGGACTTGTCA+GGG	+	chr1.3:61296751-61296770	None:intergenic	45.0%
	TGTTGGACCGTAAGATGGTT+AGG	+	chr1.3:61296937-61296956	None:intergenic	45.0%
	TTCAATCAGGAGGAGGTAAC+GGG	-	chr1.3:61295615-61295634	MS.gene20879:intron	45.0%
	TTCTTAAGTGTCAAGCAGGC+TGG	-	chr1.3:61294806-61294825	MS.gene20879:CDS	45.0%
	TTGCTTAGTGAGGACTTGTC+AGG	+	chr1.3:61296752-61296771	None:intergenic	45.0%
!	GAACTTTAGAGAGCCATGTG+TGG	-	chr1.3:61295408-61295427	MS.gene20879:intron	45.0%
!	GCTGGTACTTCTACTCCTTT+TGG	-	chr1.3:61294428-61294447	MS.gene20879:CDS	45.0%
!	TTATGGGCTGTCACCATCTT+TGG	+	chr1.3:61297328-61297347	None:intergenic	45.0%
!!	TCTTTGGGGTCCAAAGTGAA+TGG	+	chr1.3:61296114-61296133	None:intergenic	45.0%
!!	TGGCCTTATCCAGAAGTAAC+AGG	-	chr1.3:61295792-61295811	MS.gene20879:intron	45.0%
!!!	TCATAAGTTTTGGGGGCTGA+TGG	+	chr1.3:61295686-61295705	None:intergenic	45.0%
!!	AATAATAATAATAATACTAT+TGG	-	chr1.3:61296884-61296903	MS.gene20879:intron	5.0%
!!	AGTATTATTATTATTATTAT+TGG	+	chr1.3:61296882-61296901	None:intergenic	5.0%
	ACGCAGATTGAGGGGACTTT+AGG	-	chr1.3:61294727-61294746	MS.gene20879:CDS	50.0%
	ACTCAGATAAAACGGGACGG+AGG	-	chr1.3:61296408-61296427	MS.gene20879:intron	50.0%
	ACTCGTCAGAGTCTGTACTC+TGG	+	chr1.3:61294842-61294861	None:intergenic	50.0%
	AGCTAGCAGCAGAAGGATTG+TGG	-	chr1.3:61296723-61296742	MS.gene20879:intron	50.0%
	CGACAACTCTGACCTTTCCA+TGG	+	chr1.3:61294273-61294292	None:intergenic	50.0%
	CTCAGATAAAACGGGACGGA+GGG	-	chr1.3:61296409-61296428	MS.gene20879:intron	50.0%
	CTGATCCACCAATTCAACGG+TGG	+	chr1.3:61297298-61297317	None:intergenic	50.0%
	GATCAATCACTACCCTCCAG+TGG	-	chr1.3:61296808-61296827	MS.gene20879:intron	50.0%
	GCTAGCAGCAGAAGGATTGT+GGG	-	chr1.3:61296724-61296743	MS.gene20879:intron	50.0%
	GCTGTCACCATCTTTGGTAG+TGG	+	chr1.3:61297322-61297341	None:intergenic	50.0%
	GTCAGATATTCCAGGACGGA+GGG	+	chr1.3:61296209-61296228	None:intergenic	50.0%
	GTGGTGTATACCACGAATGG+TGG	-	chr1.3:61295462-61295481	MS.gene20879:intron	50.0%
	TAAGTGTCAAGCAGGCTGGT+GGG	-	chr1.3:61294810-61294829	MS.gene20879:CDS	50.0%
	TATTAGCCGGCAAAGACACG+TGG	+	chr1.3:61296531-61296550	None:intergenic	50.0%
	TCAATCAGGAGGAGGTAACG+GGG	-	chr1.3:61295616-61295635	MS.gene20879:intron	50.0%
	TCCGACGATTGACCTTTCCA+TGG	-	chr1.3:61294253-61294272	MS.gene20879:CDS	50.0%
	TTAAGTGTCAAGCAGGCTGG+TGG	-	chr1.3:61294809-61294828	MS.gene20879:CDS	50.0%
	TTACGGTCCAACAACGTAGG+TGG	-	chr1.3:61296944-61296963	MS.gene20879:intron	50.0%
	TTGCAGCACCACCGTTGAAT+TGG	-	chr1.3:61297287-61297306	MS.gene20879:CDS	50.0%
!!	CATGGCTCTCTAAAGTTCGG+AGG	+	chr1.3:61295406-61295425	None:intergenic	50.0%
!!!	AAGTTTTGGGGGCTGATGGT+TGG	+	chr1.3:61295682-61295701	None:intergenic	50.0%
	AAGTGTCAAGCAGGCTGGTG+GGG	-	chr1.3:61294811-61294830	MS.gene20879:CDS	55.0%
	CAGCACCACCGTTGAATTGG+TGG	-	chr1.3:61297290-61297309	MS.gene20879:CDS	55.0%
	CATGGTTGGAGATGCCCTTC+AGG	-	chr1.3:61297033-61297052	MS.gene20879:intron	55.0%
	CTGAAGGCCACCTACGTTGT+TGG	+	chr1.3:61296954-61296973	None:intergenic	55.0%
	GGTCAGATATTCCAGGACGG+AGG	+	chr1.3:61296210-61296229	None:intergenic	55.0%
	TTTGGGGGCTGATGGTTGGT+GGG	+	chr1.3:61295678-61295697	None:intergenic	55.0%
!!	TTTTGGGGGCTGATGGTTGG+TGG	+	chr1.3:61295679-61295698	None:intergenic	55.0%
	AGTGTCAAGCAGGCTGGTGG+GGG	-	chr1.3:61294812-61294831	MS.gene20879:CDS	60.0%
	CATTGGGGTCAGGAGGGACA+GGG	+	chr1.3:61297003-61297022	None:intergenic	60.0%
	GTGTACTACTCCCTCCGTCC+TGG	-	chr1.3:61296196-61296215	MS.gene20879:intron	60.0%
	TAGCCGGCAAAGACACGTGG+CGG	+	chr1.3:61296528-61296547	None:intergenic	60.0%
	TCATTGGGGTCAGGAGGGAC+AGG	+	chr1.3:61297004-61297023	None:intergenic	60.0%
	AGCCGGCAAAGACACGTGGC+GGG	+	chr1.3:61296527-61296546	None:intergenic	65.0%
	GACCCGCCACGTGTCTTTGC+CGG	-	chr1.3:61296522-61296541	MS.gene20879:intron	65.0%
!!	CAGGAGGAGGTAACGGGGAG+TGG	-	chr1.3:61295621-61295640	MS.gene20879:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	61294194	61297483	61294194	ID=MS.gene20879
chr1.3	mRNA	61294194	61297483	61294194	ID=MS.gene20879.t1;Parent=MS.gene20879
chr1.3	exon	61297098	61297483	61297098	ID=MS.gene20879.t1.exon1;Parent=MS.gene20879.t1
chr1.3	CDS	61297098	61297483	61297098	ID=cds.MS.gene20879.t1;Parent=MS.gene20879.t1
chr1.3	exon	61294623	61295010	61294623	ID=MS.gene20879.t1.exon2;Parent=MS.gene20879.t1
chr1.3	CDS	61294623	61295010	61294623	ID=cds.MS.gene20879.t1;Parent=MS.gene20879.t1
chr1.3	exon	61294194	61294472	61294194	ID=MS.gene20879.t1.exon3;Parent=MS.gene20879.t1
chr1.3	CDS	61294194	61294472	61294194	ID=cds.MS.gene20879.t1;Parent=MS.gene20879.t1

Gene Sequence

>MS.gene20879

ATGGTAGTACCTTCTCCAACTTCCATGATAAGAACTAAGAAAACAAAGGCTGTGGGAATTCCGACGATTGACCTTTCCATGGAAAGGTCAGAGTTGTCGGAATTAGTGGTGAAAGCTTGCGAAGAATATGGTTTTTTTAAGGTGGTGAATCATGGTGTACCAAAGGAGGTTATTTCAAGGTTGGAAAATGAAGGAACAGAGTTTTTCTCAAAAACCTCTTCAGAGAAACTTCAAGCTGGTACTTCTACTCCTTTTGGTTATGGCTGCAAAAATATTGGACCCAATGGTGATAAAGGTGACCTTGAATATCTTCTCCTTCACACCAATCCTAATTCAATCTCTGAGAGATCCAAAACCATAGCAAAAGATCACCCTATCAAGTTCAGGTATTGATTCAGTCACTCATTAATTGTTTAATTAGATAAAATATTTGTCAATAATATATTAAACATGACCAATTAATTTGATATTGCTTTATAACATAATGATAAAAAAAGTGGGGGAAAAGTATAATATATTGTAATACTATAATAACGCAGATTGAGGGGACTTTAGGATTATAATATATGAAGTAATATATAGGTTAGGGAACAAGGTGTTATCAGTTAGTGTTTCTTAAGTGTCAAGCAGGCTGGTGGGGGATAGCCAGAGTACAGACTCTGACGAGTTTGACAAAACATTGATATTCTATATTTGGGTGGTTGATGTGTCATTTTTTATTTCCATATATATTGCGGTAACATTTCAAAAGGTTGGAATGAAAAAAGGTTGATAACAAAAAGAACTGTGAAGGAAGGAAGGACATAAGTATTTAATATTATCAATGCTTTATGCTTGTATCCTAGATAGGGACATTTTTCCTTTATATTCCAAATCATACCAGAAAAATTTATTTTAATTACTAGTTTAACAAATGCATTTTGCCTCACCTTCTTGATGTAATATGTATAGTTGTTTTCTCGTGGTTGATTTGGCTACGTGACTATGACTTCTACACCTTTCAATTAGTTGGAGACCATTCTGATGTTAACATAATGGATTCATTTGGGCTTCTATTCATGTTGATGAGCCCTGTCTCTGACTTTGTTTGTACAAAACTACATAACCATTATCCTCACTTGTACCAAAATCACATTGGTTTGTGTTGTAACATCACAAGAGTACCAAGTAAGAGGTTACGGATTCGATCCTGTTACTAACATTTTTTTTCCTCCGAACTTTAGAGAGCCATGTGTGGACACATGTCACATTTGTGTGTGGAGGTTAAAGTGGTGTATACCACGAATGGTGGTATATGTATCAACTTGGATACCGAATATAGATACCTCTTCTAAAAAGATTCAAATATTGATTCGTCTTGTTGTGTCAACTTAGTTTTCTTTGTTAATTAAGGATTAAGATAAAAATAATAATAAATTCAATTCAATCAGGAGGAGGTAACGGGGAGTGGCAATCAATCTTAAACTTAATTGAATATGGAACCCACCAACCATCAGCCCCCAAAACTTATGACATTAGGCAGTAATGTGTATGATGCAAGTGCTAGAGAAACTTATCTTCATCAAGAAAAATTATCATGCATAATTAAGCATTACTTTTGGCCTTATCCAGAAGTAACAGGACTTATAAGTCGTATAGAACACGATGATAGATGATCCACCATACACAATTAGATATAATTCCATTATTAGATCAAATGAGATGTGATGATATTTAATGATTTAATGGTGGCACATTCCCATGATACAACACTATCTTATTGGTTATGAGAAACGTATATAGCAAAGTAATCCATATCGAGCTAGGTTATTTTTGGCATAATATCTTGCATATGGATATTTGTTGTGACAGCATGATCTTCATTTTGCTAATTATTATTATTATTATTATTATTATTTTTATTTTTATAAAGATCTTCCATTCACTTTGGACCCCAAAGAAATTAAACCAATCAATAACTCATTGCGTGTCTCACTCGTGTTCCAATCAATTCAATTCAATAGTGTACTACTCCCTCCGTCCTGGAATATCTGACCCATTTTCTAAAAAAAAGTGTCCCAAAATAACTGAGTCATTTCAATTTTCAATACAACTTTCATCATTCCCAATACAATATAACTCTAATTAATACTACTTTCATCATTCCCAATACAATATATTTCACTTTCCCCTTTATTTATACATTTTTCTTAATCTGTGTGAAAAACCAAACTGACTCAGATAAAACGGGACGGAGGGAGCAGTAGTATTCATTAGCACAATCAAATCAAGAATATAGGAAAAACCTTTTATTTTCTTCATTTCAATAATTATTAGTTTAAATGATTTGACCCGCCACGTGTCTTTGCCGGCTAATATTTAGCAACGTTGATAATAGAAAAGACGCATTGTTTTCACGAAGATACAAAAATAGTAGTGTTAGTTAATAGTTGTGACTATGTGTAACGTTTTTAGCCTTCCAATTTTCTTGCAGTTGCATCGTCACTGATTATATAGAAGCAGTTAAAGAATTAACGTGTGAGATTCTTGAGCTAGCAGCAGAAGGATTGTGGGTCCCTGACAAGTCCTCACTAAGCAAAGTTATCAAAGACGTTCATAGTGACTCAGTCCTTAGGATCAATCACTACCCTCCAGTGGTGAAGAAATTAAGCAACGATAATTTGGACCCATCAAAATTCCAAAATACCAATAATAATAATAATAATACTATTGGTTTTGGAGAGCATTCTGATCCTCAGATCCTAACCATCTTACGGTCCAACAACGTAGGTGGCCTTCAGATTTCAACTCAACACGGATTGTGGATCCCTGTCCCTCCTGACCCCAATGAATTCTATGTCATGGTTGGAGATGCCCTTCAGGTTACTTGCTTTCTAATCAACTCCATTCATAATTCGATTCATTGTACTACTACGATATTTTGTTACACATCAAAGTTTCGACAAAATCACAATGTCACAATCATTTTTGCATAGTACTTATGTTGTTATGTGTTTTTTTCTTTTGTGTAGGTTTTGACAAATGGGAGGTTTGTGAGTGTGAGACATAGAGTATTGACAAACACAACAAAGCCCAGAATGTCAATGATGTACTTTGCAGCACCACCGTTGAATTGGTGGATCAGTCCACTACCAAAGATGGTGACAGCCCATAACCCATCTCTGTATAAGCCCTTTACATGGGCCCAATATAAACAAGCAGCATATGCTCTTCGATTGGGAGATTCACGTCTTGATCAATTCAAGCTCCAAAAACAAGAAGACAATAGCCATCATCACCATGACATTTGA

Protein sequence

>MS.gene20879.t1

MVVPSPTSMIRTKKTKAVGIPTIDLSMERSELSELVVKACEEYGFFKVVNHGVPKEVISRLENEGTEFFSKTSSEKLQAGTSTPFGYGCKNIGPNGDKGDLEYLLLHTNPNSISERSKTIAKDHPIKFSCIVTDYIEAVKELTCEILELAAEGLWVPDKSSLSKVIKDVHSDSVLRINHYPPVVKKLSNDNLDPSKFQNTNNNNNNTIGFGEHSDPQILTILRSNNVGGLQISTQHGLWIPVPPDPNEFYVMVGDALQVLTNGRFVSVRHRVLTNTTKPRMSMMYFAAPPLNWWISPLPKMVTAHNPSLYKPFTWAQYKQAAYALRLGDSRLDQFKLQKQEDNSHHHHDI