Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20953.t1 | XP_013469103.1 | 99 | 1124 | 4 | 1 | 1 | 1117 | 1 | 1124 | 0.00E+00 | 2181.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20953.t1 | P15001 | 94.8 | 1124 | 51 | 1 | 1 | 1117 | 1 | 1124 | 0.0e+00 | 2101.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20953.t1 | A0A072VNC2 | 99.0 | 1124 | 4 | 1 | 1 | 1117 | 1 | 1124 | 0.0e+00 | 2181.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050945 | MS.gene20953 | 0.817482 | 3.22E-52 | -1.69E-46 |
| MS.gene052072 | MS.gene20953 | 0.821821 | 3.29E-53 | -1.69E-46 |
| MS.gene058074 | MS.gene20953 | 0.814828 | 1.26E-51 | -1.69E-46 |
| MS.gene059802 | MS.gene20953 | 0.801391 | 9.20E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20953.t1 | MTR_1g085160 | 99.021 | 1124 | 4 | 1 | 1 | 1117 | 48 | 1171 | 0.0 | 2308 |
| MS.gene20953.t1 | MTR_1g085160 | 99.021 | 1124 | 4 | 1 | 1 | 1117 | 1 | 1124 | 0.0 | 2306 |
| MS.gene20953.t1 | MTR_2g034040 | 51.950 | 1128 | 517 | 10 | 2 | 1114 | 29 | 1146 | 0.0 | 1177 |
| MS.gene20953.t1 | MTR_2g049520 | 47.232 | 1120 | 541 | 15 | 7 | 1109 | 16 | 1102 | 0.0 | 1043 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene20953.t1 | AT1G09570 | 78.431 | 1122 | 234 | 2 | 1 | 1114 | 5 | 1126 | 0.0 | 1845 |
| MS.gene20953.t1 | AT1G09570 | 78.431 | 1122 | 234 | 2 | 1 | 1114 | 1 | 1122 | 0.0 | 1843 |
| MS.gene20953.t1 | AT1G09570 | 78.431 | 1122 | 234 | 2 | 1 | 1114 | 1 | 1122 | 0.0 | 1843 |
| MS.gene20953.t1 | AT1G09570 | 78.431 | 1122 | 234 | 2 | 1 | 1114 | 1 | 1122 | 0.0 | 1843 |
| MS.gene20953.t1 | AT1G09570 | 78.431 | 1122 | 234 | 2 | 1 | 1114 | 1 | 1122 | 0.0 | 1843 |
| MS.gene20953.t1 | AT1G09570 | 78.600 | 1014 | 209 | 2 | 109 | 1114 | 1 | 1014 | 0.0 | 1679 |
| MS.gene20953.t1 | AT2G18790 | 51.109 | 1127 | 518 | 10 | 9 | 1114 | 40 | 1154 | 0.0 | 1169 |
| MS.gene20953.t1 | AT5G35840 | 51.436 | 1114 | 517 | 10 | 9 | 1109 | 6 | 1108 | 0.0 | 1165 |
| MS.gene20953.t1 | AT4G16250 | 50.758 | 1121 | 521 | 9 | 8 | 1109 | 45 | 1153 | 0.0 | 1161 |
| MS.gene20953.t1 | AT2G18790 | 52.075 | 1060 | 475 | 10 | 9 | 1047 | 40 | 1087 | 0.0 | 1120 |
| MS.gene20953.t1 | AT4G18130 | 46.631 | 1113 | 526 | 19 | 24 | 1109 | 23 | 1094 | 0.0 | 993 |
Find 270 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGTCCATCTTGTAAATT+TGG | 0.118129 | 1.3:-60567589 | MS.gene20953:CDS |
| AAGGTATGCTTGTGAATTTC+TGG | 0.149045 | 1.3:-60569842 | MS.gene20953:CDS |
| CTCACCATGGTCAGCATTTC+CGG | 0.182471 | 1.3:+60570678 | None:intergenic |
| CTTGTTCATTGCAAGACTTC+TGG | 0.215857 | 1.3:-60570519 | MS.gene20953:CDS |
| TTCACTAGATCCATTATATT+GGG | 0.226491 | 1.3:+60569682 | None:intergenic |
| TTTCACTAGATCCATTATAT+TGG | 0.244699 | 1.3:+60569681 | None:intergenic |
| ATCAATCATATCCGTATCTT+TGG | 0.245243 | 1.3:+60569231 | None:intergenic |
| AACCAGATGTTTGGAAATAA+TGG | 0.247267 | 1.3:-60567039 | MS.gene20953:CDS |
| CAAGAAGCTTTCGTTAATTT+CGG | 0.247847 | 1.3:-60568435 | MS.gene20953:CDS |
| TTCAATTGCTTCCTTGGTTA+TGG | 0.256368 | 1.3:-60569992 | MS.gene20953:CDS |
| CATGGATTCAATTGCTTCCT+TGG | 0.263394 | 1.3:-60569998 | MS.gene20953:CDS |
| AACAGCAACAGTGCCTATTT+TGG | 0.264602 | 1.3:-60569110 | MS.gene20953:CDS |
| TTGTCTGATGCAGGGTTTCC+AGG | 0.274418 | 1.3:-60569523 | MS.gene20953:CDS |
| ATATTCGGCACAGATGAATT+TGG | 0.275063 | 1.3:-60568582 | MS.gene20953:CDS |
| TAGTTGCCATTTGCAGTATA+TGG | 0.290132 | 1.3:-60570025 | MS.gene20953:CDS |
| AGCCAATCATCCAACAATTC+AGG | 0.290374 | 1.3:-60570969 | MS.gene20953:CDS |
| CTTTGTGTGGTTCAACCTTA+AGG | 0.290930 | 1.3:-60570056 | MS.gene20953:CDS |
| TCGAGTTCGGTGCGTGTCTC+TGG | 0.306663 | 1.3:-60570852 | MS.gene20953:CDS |
| TATAGGAGGGATTAATTGAT+TGG | 0.308265 | 1.3:+60568602 | None:intergenic |
| CCGCAACATCATTCATTATT+CGG | 0.310601 | 1.3:+60567757 | None:intergenic |
| AGAAACAAGTTATGGATATT+AGG | 0.318535 | 1.3:-60569634 | MS.gene20953:CDS |
| CGGTGAATAATCGCATAAAA+TGG | 0.319261 | 1.3:+60570492 | None:intergenic |
| CTTCCGGTTGGCGAAGCTAT+TGG | 0.320481 | 1.3:-60569028 | MS.gene20953:CDS |
| GACAGGTCTAGAGCCATATC+TGG | 0.327846 | 1.3:-60570214 | MS.gene20953:CDS |
| AGATAAGAGAGATAGCTTTA+TGG | 0.328011 | 1.3:-60569591 | MS.gene20953:CDS |
| TCAACATCCACTGCCAAAAT+AGG | 0.328387 | 1.3:+60569097 | None:intergenic |
| CTTATATGAGAAGGCAAATC+AGG | 0.333168 | 1.3:-60568176 | MS.gene20953:CDS |
| GCGATTATTCACCGTGTTAC+CGG | 0.333840 | 1.3:-60570483 | MS.gene20953:CDS |
| TCCCTGAATTGTTGGATGAT+TGG | 0.338191 | 1.3:+60570967 | None:intergenic |
| CTTGTAATCTCCTTCAATTC+GGG | 0.339613 | 1.3:+60568641 | None:intergenic |
| TCTTCTGAGCAGTTATATCT+TGG | 0.340208 | 1.3:+60568682 | None:intergenic |
| TCTTGATCTCCCTGAATTGT+TGG | 0.341463 | 1.3:+60570959 | None:intergenic |
| TTCCGAGTTGACAGGTCTTC+CGG | 0.341506 | 1.3:-60569044 | MS.gene20953:CDS |
| CCTTGTAATCTCCTTCAATT+CGG | 0.346124 | 1.3:+60568640 | None:intergenic |
| GCATTAACTATCAAACTAAT+AGG | 0.348807 | 1.3:+60568756 | None:intergenic |
| AGCATAACACATGGTGGAAA+TGG | 0.350939 | 1.3:-60567081 | MS.gene20953:CDS |
| ATCACAAAGCCCCAATATAA+TGG | 0.357439 | 1.3:-60569692 | MS.gene20953:CDS |
| GAAACAGAAAAGGTTCCTTT+TGG | 0.358869 | 1.3:-60568381 | MS.gene20953:CDS |
| GGCAAGCAGATCCAGCCTTT+TGG | 0.361823 | 1.3:-60570759 | MS.gene20953:CDS |
| CGTGTCTCTGGTTCAGTTGA+TGG | 0.365933 | 1.3:-60570840 | MS.gene20953:CDS |
| GCCCATTATTTCCAAACATC+TGG | 0.367039 | 1.3:+60567037 | None:intergenic |
| TTTGTGTGGTTCAACCTTAA+GGG | 0.367360 | 1.3:-60570055 | MS.gene20953:CDS |
| GATCGAAGGGATGCAGGAAT+TGG | 0.372613 | 1.3:-60569167 | MS.gene20953:CDS |
| GTGATGGATAAAATGCTTCT+AGG | 0.375567 | 1.3:-60568501 | MS.gene20953:CDS |
| TCCATTTGGTGTGGAATTGA+TGG | 0.377120 | 1.3:+60567659 | None:intergenic |
| GCAGCTATGATTAAGATAAC+TGG | 0.378139 | 1.3:-60568540 | MS.gene20953:CDS |
| CAATTAATCCCTCCTATATT+CGG | 0.379281 | 1.3:-60568597 | MS.gene20953:CDS |
| AATTCATCTGTGCCGAATAT+AGG | 0.380738 | 1.3:+60568585 | None:intergenic |
| TTGTTCATTGCAAGACTTCT+GGG | 0.382407 | 1.3:-60570518 | MS.gene20953:CDS |
| TAATAAAGCGATGACTGGTT+TGG | 0.382757 | 1.3:-60568403 | MS.gene20953:CDS |
| CCACACAAAGTCAAATCAAA+TGG | 0.386979 | 1.3:+60570069 | None:intergenic |
| ACTCTAACTAAAGAACAGTT+AGG | 0.392636 | 1.3:-60567615 | MS.gene20953:CDS |
| CACGGGTCTAAGACGGATTC+CGG | 0.396350 | 1.3:-60568780 | MS.gene20953:CDS |
| ATCTTGTAAATTTGGAGCTC+AGG | 0.402723 | 1.3:-60567581 | MS.gene20953:intron |
| CAAATCAGGAATCCTTTGTC+TGG | 0.404340 | 1.3:-60568162 | MS.gene20953:CDS |
| GCAACTATGTGGGGCCCTTA+AGG | 0.408076 | 1.3:+60570041 | None:intergenic |
| GATGCGGAGGGCCTAGTTAC+CGG | 0.412749 | 1.3:-60568300 | MS.gene20953:CDS |
| GTAAGCTGTTGTTACTTTGT+TGG | 0.419763 | 1.3:+60570800 | None:intergenic |
| TCTTAGACTTCAGCAGGTCT+TGG | 0.422081 | 1.3:-60567700 | MS.gene20953:CDS |
| ATAGGAGGGATTAATTGATT+GGG | 0.426264 | 1.3:+60568603 | None:intergenic |
| TGTAACGCTTGTTGCAGCTC+CGG | 0.426311 | 1.3:+60568249 | None:intergenic |
| GACCACCCTGCCCTTGGCAT+TGG | 0.429364 | 1.3:-60570633 | MS.gene20953:CDS |
| TTCCTTTGACTACTCGAGTT+CGG | 0.429419 | 1.3:-60570865 | MS.gene20953:CDS |
| GCAGTGCTGAACCAGATGTT+TGG | 0.433058 | 1.3:-60567048 | MS.gene20953:CDS |
| GGATAGTGCAAACCCAGATA+TGG | 0.433533 | 1.3:+60570201 | None:intergenic |
| GATGCTTAATCTGGCACTGC+AGG | 0.433909 | 1.3:-60568954 | MS.gene20953:CDS |
| GTTCGATATTTAAAAGAAGC+TGG | 0.435439 | 1.3:-60566949 | MS.gene20953:CDS |
| GACAAATTCACCCGAATTGA+AGG | 0.436659 | 1.3:-60568651 | MS.gene20953:CDS |
| CTTCTGAGCAGTTATATCTT+GGG | 0.437606 | 1.3:+60568683 | None:intergenic |
| ACCAGATGTTTGGAAATAAT+GGG | 0.438607 | 1.3:-60567038 | MS.gene20953:CDS |
| AGTCAAGAAGATGCTTAATC+TGG | 0.442145 | 1.3:-60568963 | MS.gene20953:CDS |
| ATAACAACCTGACCTCCATT+TGG | 0.442580 | 1.3:+60567645 | None:intergenic |
| TGTCTGATGCAGGGTTTCCA+GGG | 0.443340 | 1.3:-60569522 | MS.gene20953:CDS |
| GTCGGTGACCACCCTGCCCT+TGG | 0.448616 | 1.3:-60570639 | MS.gene20953:CDS |
| TCCATCAATTCCACACCAAA+TGG | 0.449632 | 1.3:-60567660 | MS.gene20953:CDS |
| TGCCTCTTTGTATTGTATTG+AGG | 0.450361 | 1.3:+60570778 | None:intergenic |
| ATATCTGGGTTTGCACTATC+CGG | 0.451879 | 1.3:-60570199 | MS.gene20953:CDS |
| CTCTTAGTCAAGTCATGAAT+AGG | 0.453661 | 1.3:-60567797 | MS.gene20953:CDS |
| AAAGCATGAACCTGGCGAAC+AGG | 0.454684 | 1.3:-60569386 | MS.gene20953:CDS |
| ACGGATAGCTTGTCTGATGC+AGG | 0.458830 | 1.3:-60569532 | MS.gene20953:CDS |
| CTACCATCATCCTGTTCGCC+AGG | 0.462148 | 1.3:+60569376 | None:intergenic |
| TATTTCTTTGTTCACATGGA+TGG | 0.464909 | 1.3:+60569807 | None:intergenic |
| TAGTTAATGCGTGTGCAAGC+AGG | 0.464965 | 1.3:-60568743 | MS.gene20953:CDS |
| AAATTTCACGAGGATGATCA+TGG | 0.465494 | 1.3:-60570261 | MS.gene20953:CDS |
| ATCAAAATTTCCGAGTTGAC+AGG | 0.466192 | 1.3:-60569052 | MS.gene20953:CDS |
| TAACTGTTCTTTAGTTAGAG+TGG | 0.466312 | 1.3:+60567617 | None:intergenic |
| TGTTAGCCATATACTGCAAA+TGG | 0.471732 | 1.3:+60570019 | None:intergenic |
| GACTGGTTTGGAAACAGAAA+AGG | 0.472692 | 1.3:-60568391 | MS.gene20953:CDS |
| GCAGTCATGGGAACTTCATA+AGG | 0.472727 | 1.3:+60570429 | None:intergenic |
| GTTGTTACTTTGTTGGACCT+TGG | 0.473773 | 1.3:+60570807 | None:intergenic |
| ACCATGGAAAGACTTTGAAA+TGG | 0.480694 | 1.3:-60569293 | MS.gene20953:CDS |
| TTTCCAATAGCTTCGCCAAC+CGG | 0.480820 | 1.3:+60569025 | None:intergenic |
| AAGTTCAACAGATAGAATAA+AGG | 0.481758 | 1.3:+60566918 | None:intergenic |
| TTCCACACCAAATGGAGGTC+AGG | 0.481947 | 1.3:-60567652 | MS.gene20953:CDS |
| GATCTAGACAGCATCATTGA+TGG | 0.482806 | 1.3:-60568024 | MS.gene20953:CDS |
| GCATAACACATGGTGGAAAT+GGG | 0.484009 | 1.3:-60567080 | MS.gene20953:CDS |
| GCAGGGTGGTCACCGACACT+AGG | 0.485484 | 1.3:+60570645 | None:intergenic |
| CAGTGACGAGTGAGATGGTT+CGG | 0.486902 | 1.3:-60569141 | MS.gene20953:CDS |
| CCATTTGATTTGACTTTGTG+TGG | 0.488925 | 1.3:-60570069 | MS.gene20953:CDS |
| TTGAACTAACAGGTTATGAC+AGG | 0.493092 | 1.3:-60570296 | MS.gene20953:CDS |
| ATTCACTCTGCATGAGGTAC+TGG | 0.493254 | 1.3:-60567826 | MS.gene20953:CDS |
| AACAGAAGACCCCGGTAACT+AGG | 0.493774 | 1.3:+60568289 | None:intergenic |
| GTACTTAATAAAGCGATGAC+TGG | 0.494971 | 1.3:-60568408 | MS.gene20953:CDS |
| GAGTGCTTCTGCGCTACAAA+AGG | 0.496096 | 1.3:-60570580 | MS.gene20953:CDS |
| AAAGCCTTGAATGATGATCT+TGG | 0.496392 | 1.3:+60569343 | None:intergenic |
| GCCAATCATCCAACAATTCA+GGG | 0.496752 | 1.3:-60570968 | MS.gene20953:CDS |
| GGCAGTGGATGTTGATGGGA+TGG | 0.498676 | 1.3:-60569089 | MS.gene20953:CDS |
| TCAGTTCCAATGCCAAGGGC+AGG | 0.498965 | 1.3:+60570627 | None:intergenic |
| CACACAAAGTCAAATCAAAT+GGG | 0.498967 | 1.3:+60570070 | None:intergenic |
| AATGTTGGAGAATACTGAGT+TGG | 0.501979 | 1.3:-60568121 | MS.gene20953:CDS |
| GGAACTTCATAAGGCTTCAC+TGG | 0.502178 | 1.3:+60570438 | None:intergenic |
| GCTTTGTGATACAATACCTA+AGG | 0.505507 | 1.3:+60569705 | None:intergenic |
| TCCTAGCCTTCACAACTTCG+AGG | 0.505957 | 1.3:+60569320 | None:intergenic |
| ATGCGGAGGGCCTAGTTACC+GGG | 0.508160 | 1.3:-60568299 | MS.gene20953:CDS |
| TGAGAGCGGTTTGTTCAGAT+AGG | 0.509064 | 1.3:+60568217 | None:intergenic |
| CTGATGCGAGATGCACCCTT+AGG | 0.509221 | 1.3:-60569721 | MS.gene20953:CDS |
| GTCAATGACAGCGATGAAGA+TGG | 0.509661 | 1.3:-60569961 | MS.gene20953:CDS |
| TAATGCGCCTGCTGCAGTCA+TGG | 0.511154 | 1.3:+60570416 | None:intergenic |
| ACAACTTTCTACTGATGTGT+AGG | 0.512153 | 1.3:+60566992 | None:intergenic |
| CTAGCAAGCAACCAAAAGGC+TGG | 0.512234 | 1.3:+60570748 | None:intergenic |
| TTTGAAGATCGAAGGGATGC+AGG | 0.512663 | 1.3:-60569173 | MS.gene20953:CDS |
| TCCATTTCAAAGTCTTTCCA+TGG | 0.514245 | 1.3:+60569292 | None:intergenic |
| GCATCCAAGATCATCATTCA+AGG | 0.514409 | 1.3:-60569347 | MS.gene20953:CDS |
| ATGTTGGAGAATACTGAGTT+GGG | 0.514837 | 1.3:-60568120 | MS.gene20953:CDS |
| GTAACGCTTGTTGCAGCTCC+GGG | 0.517155 | 1.3:+60568250 | None:intergenic |
| ATTCTATTTCTTTGTTCACA+TGG | 0.517827 | 1.3:+60569803 | None:intergenic |
| CTAAATGATTTGAAGATCGA+AGG | 0.518060 | 1.3:-60569181 | MS.gene20953:CDS |
| TGCCTAGTGGCAGCATGGAA+AGG | 0.518888 | 1.3:-60570347 | MS.gene20953:CDS |
| AACTATCAAACTAATAGGAC+CGG | 0.519104 | 1.3:+60568761 | None:intergenic |
| TCAAACCAGTCGAATCTGTA+TGG | 0.519941 | 1.3:+60569557 | None:intergenic |
| TATGATTGATTTAAACTCAA+AGG | 0.520564 | 1.3:-60569218 | MS.gene20953:CDS |
| GAAGTTCCCATGACTGCAGC+AGG | 0.521612 | 1.3:-60570423 | MS.gene20953:CDS |
| TCTTGTATAGAAACAAGTTA+TGG | 0.521619 | 1.3:-60569642 | MS.gene20953:CDS |
| CACTGCTGCAGAAATCCGAT+GGG | 0.522593 | 1.3:-60569416 | MS.gene20953:CDS |
| CATGCTTTGCACCACCCCAT+CGG | 0.527680 | 1.3:+60569401 | None:intergenic |
| ACATTTACTCACACTTGTTG+AGG | 0.528125 | 1.3:-60569002 | MS.gene20953:CDS |
| ACAACAGTGTCTGCGTGCGC+AGG | 0.530607 | 1.3:+60569752 | None:intergenic |
| TCGTTAAGTTTAAGAGCCCC+TGG | 0.531192 | 1.3:+60569505 | None:intergenic |
| GCCTGGGGAATATCTGTGGC+CGG | 0.531960 | 1.3:+60570180 | None:intergenic |
| AAAGCTAGCAAGCAACCAAA+AGG | 0.534264 | 1.3:+60570744 | None:intergenic |
| GATGTTGATGGGATGGTCAA+TGG | 0.534907 | 1.3:-60569082 | MS.gene20953:CDS |
| TAGGAGGGATTAATTGATTG+GGG | 0.535454 | 1.3:+60568604 | None:intergenic |
| TACTGCAAATGGCAACTATG+TGG | 0.535932 | 1.3:+60570030 | None:intergenic |
| TGATAGTCTTAGACTTCAGC+AGG | 0.536352 | 1.3:-60567706 | MS.gene20953:CDS |
| GGCTTTCCTCGAAGTTGTGA+AGG | 0.538027 | 1.3:-60569326 | MS.gene20953:CDS |
| CCGAATTGAAGGAGATTACA+AGG | 0.539935 | 1.3:-60568640 | MS.gene20953:CDS |
| TCCTCGAAGTTGTGAAGGCT+AGG | 0.540137 | 1.3:-60569321 | MS.gene20953:CDS |
| TAGCAAAATTCTTGATGACT+CGG | 0.540197 | 1.3:-60568046 | MS.gene20953:CDS |
| GTCTGATGCAGGGTTTCCAG+GGG | 0.541298 | 1.3:-60569521 | MS.gene20953:CDS |
| ACAAAAGGCACTAGGATTTG+CGG | 0.541535 | 1.3:-60570565 | MS.gene20953:CDS |
| ATTGCTGAGGTAACAAAGAC+AGG | 0.541815 | 1.3:-60570231 | MS.gene20953:CDS |
| AGTTAATGCGTGTGCAAGCA+GGG | 0.542610 | 1.3:-60568742 | MS.gene20953:CDS |
| ACACTGCTGCAGAAATCCGA+TGG | 0.543900 | 1.3:-60569417 | MS.gene20953:CDS |
| AAATCAGGAATCCTTTGTCT+GGG | 0.547598 | 1.3:-60568161 | MS.gene20953:CDS |
| ATGGAAGCGAGAGGAGGTGA+TGG | 0.547827 | 1.3:-60568517 | MS.gene20953:CDS |
| ATCTTTGCCTAGTGGCAGCA+TGG | 0.548173 | 1.3:-60570352 | MS.gene20953:CDS |
| ATCGCGATGGAAACCTTGTA+TGG | 0.549194 | 1.3:-60567729 | MS.gene20953:CDS |
| TTATGTCAGTTCCAATGCCA+AGG | 0.550411 | 1.3:+60570622 | None:intergenic |
| CAGGGTGGTCACCGACACTA+GGG | 0.554292 | 1.3:+60570646 | None:intergenic |
| AAACTTAACGATACTGTATG+TGG | 0.555127 | 1.3:-60569493 | MS.gene20953:CDS |
| AATTTGGCTGGTGTTGTGAG+TGG | 0.555569 | 1.3:-60568566 | MS.gene20953:CDS |
| AACCGGAAGACCTGTCAACT+CGG | 0.559298 | 1.3:+60569042 | None:intergenic |
| TCTCTTATCTGAGGTTCACT+CGG | 0.559883 | 1.3:+60569604 | None:intergenic |
| TTGATGGGATGGTCAATGGT+TGG | 0.560226 | 1.3:-60569078 | MS.gene20953:CDS |
| TCATCTGTGCCGAATATAGG+AGG | 0.560999 | 1.3:+60568588 | None:intergenic |
| TCGGCACAGATGAATTTGGC+TGG | 0.562466 | 1.3:-60568578 | MS.gene20953:CDS |
| CAGAAGTCTTGCAATGAACA+AGG | 0.562779 | 1.3:+60570520 | None:intergenic |
| TTTGCAGTATATGGCTAACA+TGG | 0.565032 | 1.3:-60570016 | MS.gene20953:CDS |
| ACTGCAAATGGCAACTATGT+GGG | 0.566316 | 1.3:+60570031 | None:intergenic |
| TCTTGCAATGAACAAGGATA+GGG | 0.567253 | 1.3:+60570526 | None:intergenic |
| GAGAAACGCATCCAAAGATA+CGG | 0.567684 | 1.3:-60569242 | MS.gene20953:CDS |
| GTCTTGCAATGAACAAGGAT+AGG | 0.570149 | 1.3:+60570525 | None:intergenic |
| TACTTTCAGTCTCTTGAGAG+CGG | 0.571332 | 1.3:+60568203 | None:intergenic |
| CCGAATAATGAATGATGTTG+CGG | 0.572031 | 1.3:-60567757 | MS.gene20953:CDS |
| TAAATGATTTGAAGATCGAA+GGG | 0.574470 | 1.3:-60569180 | MS.gene20953:CDS |
| GATCTTCATGAAAATGTAGT+GGG | 0.575911 | 1.3:-60568720 | MS.gene20953:CDS |
| GGATAAAATGCTTCTAGGAG+AGG | 0.576307 | 1.3:-60568496 | MS.gene20953:CDS |
| AGATTCGACTGGTTTGAGTA+CGG | 0.576797 | 1.3:-60569551 | MS.gene20953:CDS |
| AATGCGCCTGCTGCAGTCAT+GGG | 0.577517 | 1.3:+60570417 | None:intergenic |
| GAACCTGGCGAACAGGATGA+TGG | 0.577808 | 1.3:-60569379 | MS.gene20953:CDS |
| CGCAGCCTGGGGAATATCTG+TGG | 0.577872 | 1.3:+60570176 | None:intergenic |
| AGCCTTTCCATGCTGCCACT+AGG | 0.578839 | 1.3:+60570345 | None:intergenic |
| GGAAAGGCTTTGCGATACAA+TGG | 0.579896 | 1.3:-60570331 | MS.gene20953:CDS |
| TCACTAGATCCATTATATTG+GGG | 0.580469 | 1.3:+60569683 | None:intergenic |
| GAATTGTTGGATGATTGGCT+AGG | 0.581778 | 1.3:+60570972 | None:intergenic |
| TGGATCTAGTGAAATGTGAT+GGG | 0.582037 | 1.3:-60569672 | MS.gene20953:CDS |
| AAAGTCAATGATCAAACTAC+CGG | 0.582203 | 1.3:+60570464 | None:intergenic |
| AATTTCACGAGGATGATCAT+GGG | 0.582420 | 1.3:-60570260 | MS.gene20953:CDS |
| TCTAAGACTATCACCATACA+AGG | 0.582514 | 1.3:+60567716 | None:intergenic |
| TGAGCTCCAAATTTACAAGA+TGG | 0.582870 | 1.3:+60567583 | None:intergenic |
| ATCTAGACAGCATCATTGAT+GGG | 0.584630 | 1.3:-60568023 | MS.gene20953:intron |
| CGGATAGCTTGTCTGATGCA+GGG | 0.586011 | 1.3:-60569531 | MS.gene20953:CDS |
| CAGTTCCAATGCCAAGGGCA+GGG | 0.587285 | 1.3:+60570628 | None:intergenic |
| TTCCGAGAGAGAAAACCAAA+AGG | 0.588084 | 1.3:+60568366 | None:intergenic |
| ATGGATCTAGTGAAATGTGA+TGG | 0.589258 | 1.3:-60569673 | MS.gene20953:CDS |
| ACAGGTCTAGAGCCATATCT+GGG | 0.589991 | 1.3:-60570213 | MS.gene20953:CDS |
| AAGTATTAACTTATATGAGA+AGG | 0.590694 | 1.3:-60568185 | MS.gene20953:CDS |
| CAGGTACTTGGATCTCGAGA+TGG | 0.590762 | 1.3:-60567853 | MS.gene20953:CDS |
| CTCTAACTAAAGAACAGTTA+GGG | 0.590954 | 1.3:-60567614 | MS.gene20953:CDS |
| TACCTCAATACAATACAAAG+AGG | 0.592329 | 1.3:-60570780 | MS.gene20953:CDS |
| CGTGACAATCAACTATCATA+CGG | 0.592496 | 1.3:+60570127 | None:intergenic |
| GGAGATCAAGAAATAGTGCT+AGG | 0.595358 | 1.3:-60570947 | MS.gene20953:CDS |
| CAAAACACACGGGTCTAAGA+CGG | 0.599832 | 1.3:-60568787 | MS.gene20953:CDS |
| CTGCAAATGGCAACTATGTG+GGG | 0.600674 | 1.3:+60570032 | None:intergenic |
| GAGTTGACAGGTCTTCCGGT+TGG | 0.600729 | 1.3:-60569040 | MS.gene20953:CDS |
| TAACGATACTGTATGTGGAA+TGG | 0.601775 | 1.3:-60569488 | MS.gene20953:CDS |
| TTGTCACGCAAAACATGTGA+AGG | 0.602272 | 1.3:-60570112 | MS.gene20953:CDS |
| GGTGGTGCAAAGCATGAACC+TGG | 0.605534 | 1.3:-60569394 | MS.gene20953:CDS |
| TCCGGCCACAGATATTCCCC+AGG | 0.606542 | 1.3:-60570181 | MS.gene20953:CDS |
| AACCTGACCTCCATTTGGTG+TGG | 0.607257 | 1.3:+60567650 | None:intergenic |
| GGATCTTCATGAAAATGTAG+TGG | 0.607404 | 1.3:-60568721 | MS.gene20953:CDS |
| AACTGGATGGAAGCGAGAGG+AGG | 0.609754 | 1.3:-60568523 | MS.gene20953:CDS |
| CACCGAACTCGAGTAGTCAA+AGG | 0.611550 | 1.3:+60570863 | None:intergenic |
| TATGTCAGTTCCAATGCCAA+GGG | 0.612549 | 1.3:+60570623 | None:intergenic |
| GAGTACCATACAGATTCGAC+TGG | 0.614505 | 1.3:-60569562 | MS.gene20953:CDS |
| GAGTAAGAAAATAGATGCGG+AGG | 0.615962 | 1.3:-60568313 | MS.gene20953:CDS |
| ATTCATGACTTGACTAAGAG+AGG | 0.616488 | 1.3:+60567800 | None:intergenic |
| CATAACACATGGTGGAAATG+GGG | 0.617721 | 1.3:-60567079 | MS.gene20953:CDS |
| TGCATACAGTGAGAATGCAC+CGG | 0.619615 | 1.3:-60570697 | MS.gene20953:CDS |
| CAATTCGAGATCAAAACACA+CGG | 0.619684 | 1.3:-60568798 | MS.gene20953:CDS |
| AGTCGAATCTGTATGGTACT+CGG | 0.625552 | 1.3:+60569564 | None:intergenic |
| TGATCAAACTACCGGTAACA+CGG | 0.628461 | 1.3:+60570472 | None:intergenic |
| TAATGGGCTAGAATCAGAAG+AGG | 0.628885 | 1.3:-60567022 | MS.gene20953:CDS |
| AACTGCTCAGAAGACAGTCA+TGG | 0.634261 | 1.3:-60568673 | MS.gene20953:CDS |
| CTGGCGAACAGGATGATGGT+AGG | 0.635088 | 1.3:-60569375 | MS.gene20953:CDS |
| CTTTGTGATACAATACCTAA+GGG | 0.635992 | 1.3:+60569706 | None:intergenic |
| AAGTTGTTAAAGCTTATGAA+CGG | 0.636814 | 1.3:-60566976 | MS.gene20953:CDS |
| AAAGCTATCTCTCTTATCTG+AGG | 0.636818 | 1.3:+60569595 | None:intergenic |
| ATGCTTAATCTGGCACTGCA+GGG | 0.637194 | 1.3:-60568953 | MS.gene20953:intron |
| GGAAGCAGTGACGAGTGAGA+TGG | 0.638270 | 1.3:-60569146 | MS.gene20953:CDS |
| ATCAATTCCACACCAAATGG+AGG | 0.638917 | 1.3:-60567657 | MS.gene20953:CDS |
| AGTCATGCTGTCCCTAGTGT+CGG | 0.639026 | 1.3:-60570657 | MS.gene20953:CDS |
| GGCTGAATTCACTCTGCATG+AGG | 0.639969 | 1.3:-60567832 | MS.gene20953:CDS |
| GCAGCAGCCCAAAAGTTGAG+AGG | 0.640874 | 1.3:-60566895 | MS.gene20953:CDS |
| AACACATGGTGGAAATGGGG+TGG | 0.641790 | 1.3:-60567076 | MS.gene20953:CDS |
| TCTGCGCTACAAAAGGCACT+AGG | 0.643845 | 1.3:-60570573 | MS.gene20953:CDS |
| AACAGGTTATGACAGGGTGA+TGG | 0.647543 | 1.3:-60570289 | MS.gene20953:CDS |
| TTTAGACGAGAAAACGTGCA+AGG | 0.650029 | 1.3:-60570724 | MS.gene20953:CDS |
| TTGTGTAGCATAACACATGG+TGG | 0.650607 | 1.3:-60567087 | MS.gene20953:intron |
| GAAAACACAATCCCAGACAA+AGG | 0.654982 | 1.3:+60568150 | None:intergenic |
| AGTAAGAAAATAGATGCGGA+GGG | 0.655141 | 1.3:-60568312 | MS.gene20953:CDS |
| CATCTGTGCCGAATATAGGA+GGG | 0.657662 | 1.3:+60568589 | None:intergenic |
| AGATTGCAATCTTTGCCTAG+TGG | 0.660880 | 1.3:-60570360 | MS.gene20953:CDS |
| ATTTCACGAGGATGATCATG+GGG | 0.665241 | 1.3:-60570259 | MS.gene20953:CDS |
| GACTACTACAGCCATAACCA+AGG | 0.668280 | 1.3:+60569981 | None:intergenic |
| TGAACTAACAGGTTATGACA+GGG | 0.672771 | 1.3:-60570295 | MS.gene20953:CDS |
| CTATGATTAAGATAACTGGA+TGG | 0.673061 | 1.3:-60568536 | MS.gene20953:CDS |
| AATGGGCTAGAATCAGAAGA+GGG | 0.681452 | 1.3:-60567021 | MS.gene20953:CDS |
| TCACGAGGATGATCATGGGG+AGG | 0.681759 | 1.3:-60570256 | MS.gene20953:CDS |
| AAAGGCACTAGGATTTGCGG+AGG | 0.682229 | 1.3:-60570562 | MS.gene20953:CDS |
| TGTGAGTAAGAAAATAGATG+CGG | 0.682570 | 1.3:-60568316 | MS.gene20953:CDS |
| GTGATAAAATGTCGACCACG+AGG | 0.683227 | 1.3:-60570995 | None:intergenic |
| TGTTGCGGAGCATATCGCGA+TGG | 0.683769 | 1.3:-60567742 | MS.gene20953:CDS |
| TTCCAATGCCAAGGGCAGGG+TGG | 0.684064 | 1.3:+60570631 | None:intergenic |
| GGATGATTGGCTAGGCCTCG+TGG | 0.686099 | 1.3:+60570980 | None:intergenic |
| TGAAGGCTAGGAGCATACCA+TGG | 0.687288 | 1.3:-60569309 | MS.gene20953:CDS |
| GCTGCAGAAATCCGATGGGG+TGG | 0.690305 | 1.3:-60569412 | MS.gene20953:CDS |
| TGCGGAGGGCCTAGTTACCG+GGG | 0.690803 | 1.3:-60568298 | MS.gene20953:CDS |
| GATAACTGGATGGAAGCGAG+AGG | 0.707153 | 1.3:-60568526 | MS.gene20953:CDS |
| TTTGTCATAACACTACACCA+AGG | 0.707681 | 1.3:-60569882 | MS.gene20953:intron |
| TTGATGGAGAGCATCAACCA+AGG | 0.713680 | 1.3:-60570824 | MS.gene20953:CDS |
| AGGGACAGCATGACTCACCA+TGG | 0.719846 | 1.3:+60570665 | None:intergenic |
| TAGCGCAGAAGCACTCGGTG+CGG | 0.723772 | 1.3:+60570587 | None:intergenic |
| AATTCGAGATCAAAACACAC+GGG | 0.726452 | 1.3:-60568797 | MS.gene20953:CDS |
| TGCACCGGAAATGCTGACCA+TGG | 0.728482 | 1.3:-60570682 | MS.gene20953:CDS |
| GGATCTAGTGAAATGTGATG+GGG | 0.730307 | 1.3:-60569671 | MS.gene20953:CDS |
| TCATGAATAGGAGTAACACA+AGG | 0.732967 | 1.3:-60567785 | MS.gene20953:CDS |
| GATGGCTTATAAATTTCACG+AGG | 0.753601 | 1.3:-60570271 | MS.gene20953:CDS |
| TCATGGGGAGGTGATTGCTG+AGG | 0.754373 | 1.3:-60570244 | MS.gene20953:CDS |
| ACTGCTGCAGAAATCCGATG+GGG | 0.765290 | 1.3:-60569415 | MS.gene20953:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTATTAACTTATATGAGA+AGG | - | chr1.3:60569693-60569712 | MS.gene20953:CDS | 20.0% |
| !! | AATCAACAATTAAAATCCTA+AGG | + | chr1.3:60569017-60569036 | None:intergenic | 20.0% |
| !! | TAAGTATGATAAGATAGAAA+AGG | + | chr1.3:60568962-60568981 | None:intergenic | 20.0% |
| !! | TTGAAAAACAAAGAAAAGAA+AGG | + | chr1.3:60568993-60569012 | None:intergenic | 20.0% |
| !!! | CTTTTTATTTATGAAGAACA+AGG | - | chr1.3:60567727-60567746 | MS.gene20953:CDS | 20.0% |
| !!! | GTATTTTACCAGATTAAATA+AGG | + | chr1.3:60570352-60570371 | None:intergenic | 20.0% |
| !!! | TATGATTGATTTAAACTCAA+AGG | - | chr1.3:60568660-60568679 | MS.gene20953:CDS | 20.0% |
| ! | AAGTTCAACAGATAGAATAA+AGG | + | chr1.3:60570963-60570982 | None:intergenic | 25.0% |
| ! | AAGTTGTTAAAGCTTATGAA+CGG | - | chr1.3:60570902-60570921 | MS.gene20953:CDS | 25.0% |
| ! | ACAAAAGAAAAAGAGACTTT+GGG | - | chr1.3:60567964-60567983 | MS.gene20953:intron | 25.0% |
| ! | AGAAACAAGTTATGGATATT+AGG | - | chr1.3:60568244-60568263 | MS.gene20953:CDS | 25.0% |
| ! | ATGTTAGAAACTGTTGTATT+TGG | + | chr1.3:60569966-60569985 | None:intergenic | 25.0% |
| ! | GCATTAACTATCAAACTAAT+AGG | + | chr1.3:60569125-60569144 | None:intergenic | 25.0% |
| ! | TAAATGATTTGAAGATCGAA+GGG | - | chr1.3:60568698-60568717 | MS.gene20953:CDS | 25.0% |
| ! | TCTTGTATAGAAACAAGTTA+TGG | - | chr1.3:60568236-60568255 | MS.gene20953:CDS | 25.0% |
| ! | TGTTCTCTTATAATGTAATC+AGG | - | chr1.3:60569038-60569057 | MS.gene20953:CDS | 25.0% |
| ! | TTCACTAGATCCATTATATT+GGG | + | chr1.3:60568199-60568218 | None:intergenic | 25.0% |
| ! | TTTCACTAGATCCATTATAT+TGG | + | chr1.3:60568200-60568219 | None:intergenic | 25.0% |
| !! | AAAGTCTCTTTTTCTTTTGT+GGG | + | chr1.3:60567964-60567983 | None:intergenic | 25.0% |
| !! | ATTCTATTTCTTTGTTCACA+TGG | + | chr1.3:60568078-60568097 | None:intergenic | 25.0% |
| !! | TTCAAACTCCTTATTTAATC+TGG | - | chr1.3:60570341-60570360 | MS.gene20953:CDS | 25.0% |
| AAACTTAACGATACTGTATG+TGG | - | chr1.3:60568385-60568404 | MS.gene20953:CDS | 30.0% | |
| AAAGTCAATGATCAAACTAC+CGG | + | chr1.3:60567417-60567436 | None:intergenic | 30.0% | |
| AACCAGATGTTTGGAAATAA+TGG | - | chr1.3:60570839-60570858 | MS.gene20953:CDS | 30.0% | |
| AACTATCAAACTAATAGGAC+CGG | + | chr1.3:60569120-60569139 | None:intergenic | 30.0% | |
| ACAAGTTTCTTATGTTCCTA+AGG | + | chr1.3:60570584-60570603 | None:intergenic | 30.0% | |
| ACCAGATGTTTGGAAATAAT+GGG | - | chr1.3:60570840-60570859 | MS.gene20953:CDS | 30.0% | |
| ACTCTAACTAAAGAACAGTT+AGG | - | chr1.3:60570263-60570282 | MS.gene20953:CDS | 30.0% | |
| AGTACCTGTTAAAACATACA+TGG | + | chr1.3:60570013-60570032 | None:intergenic | 30.0% | |
| ATAGGAGGGATTAATTGATT+GGG | + | chr1.3:60569278-60569297 | None:intergenic | 30.0% | |
| ATCAATCATATCCGTATCTT+TGG | + | chr1.3:60568650-60568669 | None:intergenic | 30.0% | |
| ATCTGTCCATCTTGTAAATT+TGG | - | chr1.3:60570289-60570308 | MS.gene20953:CDS | 30.0% | |
| CAAAAGAAAAAGAGACTTTG+GGG | - | chr1.3:60567965-60567984 | MS.gene20953:intron | 30.0% | |
| CAAGAAGCTTTCGTTAATTT+CGG | - | chr1.3:60569443-60569462 | MS.gene20953:CDS | 30.0% | |
| CAATTAATCCCTCCTATATT+CGG | - | chr1.3:60569281-60569300 | MS.gene20953:CDS | 30.0% | |
| CACAAAAGAAAAAGAGACTT+TGG | - | chr1.3:60567963-60567982 | MS.gene20953:intron | 30.0% | |
| CACACAAAGTCAAATCAAAT+GGG | + | chr1.3:60567811-60567830 | None:intergenic | 30.0% | |
| CTAAATGATTTGAAGATCGA+AGG | - | chr1.3:60568697-60568716 | MS.gene20953:CDS | 30.0% | |
| CTATGATTAAGATAACTGGA+TGG | - | chr1.3:60569342-60569361 | MS.gene20953:CDS | 30.0% | |
| CTCTAACTAAAGAACAGTTA+GGG | - | chr1.3:60570264-60570283 | MS.gene20953:CDS | 30.0% | |
| CTTTGTGATACAATACCTAA+GGG | + | chr1.3:60568175-60568194 | None:intergenic | 30.0% | |
| GATCTTCATGAAAATGTAGT+GGG | - | chr1.3:60569158-60569177 | MS.gene20953:CDS | 30.0% | |
| GTTCGATATTTAAAAGAAGC+TGG | - | chr1.3:60570929-60570948 | MS.gene20953:CDS | 30.0% | |
| TAACTGTTCTTTAGTTAGAG+TGG | + | chr1.3:60570264-60570283 | None:intergenic | 30.0% | |
| TACCTCAATACAATACAAAG+AGG | - | chr1.3:60567098-60567117 | MS.gene20953:intron | 30.0% | |
| TATAGGAGGGATTAATTGAT+TGG | + | chr1.3:60569279-60569298 | None:intergenic | 30.0% | |
| TATTTCTTTGTTCACATGGA+TGG | + | chr1.3:60568074-60568093 | None:intergenic | 30.0% | |
| TCACTAGATCCATTATATTG+GGG | + | chr1.3:60568198-60568217 | None:intergenic | 30.0% | |
| TCTGTTAAGCTAGTTACTTA+TGG | + | chr1.3:60570466-60570485 | None:intergenic | 30.0% | |
| TGTGAGTAAGAAAATAGATG+CGG | - | chr1.3:60569562-60569581 | MS.gene20953:CDS | 30.0% | |
| TTGTCTTAGAATAGATGGAA+AGG | - | chr1.3:60570710-60570729 | MS.gene20953:CDS | 30.0% | |
| ! | AAAACTTCATGCAACTTTTG+AGG | - | chr1.3:60566980-60566999 | MS.gene20953:CDS | 30.0% |
| ! | AGATAAGAGAGATAGCTTTA+TGG | - | chr1.3:60568287-60568306 | MS.gene20953:CDS | 30.0% |
| ! | AGTATTCTCCAACATTTTAC+TGG | + | chr1.3:60569753-60569772 | None:intergenic | 30.0% |
| ! | CAAAGTCTCTTTTTCTTTTG+TGG | + | chr1.3:60567965-60567984 | None:intergenic | 30.0% |
| ! | CAAGAAGTTTTTGAACTAAC+AGG | - | chr1.3:60567572-60567591 | MS.gene20953:intron | 30.0% |
| ! | CTTCAAAAGACATAGTTTTC+TGG | - | chr1.3:60568428-60568447 | MS.gene20953:CDS | 30.0% |
| ! | TAGCAAAATTCTTGATGACT+CGG | - | chr1.3:60569832-60569851 | MS.gene20953:CDS | 30.0% |
| ! | TGTGTTTTCCAGTAAAATGT+TGG | - | chr1.3:60569742-60569761 | MS.gene20953:CDS | 30.0% |
| ! | TTTTCTTACTCACAGAAAGT+AGG | + | chr1.3:60569556-60569575 | None:intergenic | 30.0% |
| ! | TTTTTGTGTAGCATAACACA+TGG | - | chr1.3:60570788-60570807 | MS.gene20953:CDS | 30.0% |
| !! | GTTCACAATTCGTTTTTGTT+CGG | + | chr1.3:60569786-60569805 | None:intergenic | 30.0% |
| !!! | AAGACATAGTTTTCTGGTTT+AGG | - | chr1.3:60568434-60568453 | MS.gene20953:CDS | 30.0% |
| !!! | TCTTCCATGTATGTTTTAAC+AGG | - | chr1.3:60570006-60570025 | MS.gene20953:CDS | 30.0% |
| !!! | TGTATGTTTTAACAGGTACT+TGG | - | chr1.3:60570013-60570032 | MS.gene20953:CDS | 30.0% |
| !!! | TTCTTTGTTTTTCAAGCCTT+AGG | - | chr1.3:60568998-60569017 | MS.gene20953:CDS | 30.0% |
| AAAGCCTTGAATGATGATCT+TGG | + | chr1.3:60568538-60568557 | None:intergenic | 35.0% | |
| AAAGCTATCTCTCTTATCTG+AGG | + | chr1.3:60568286-60568305 | None:intergenic | 35.0% | |
| AAATCAGGAATCCTTTGTCT+GGG | - | chr1.3:60569717-60569736 | MS.gene20953:CDS | 35.0% | |
| AAATTTCACGAGGATGATCA+TGG | - | chr1.3:60567617-60567636 | MS.gene20953:CDS | 35.0% | |
| AAGGTATGCTTGTGAATTTC+TGG | - | chr1.3:60568036-60568055 | MS.gene20953:CDS | 35.0% | |
| AATGTTGGAGAATACTGAGT+TGG | - | chr1.3:60569757-60569776 | MS.gene20953:CDS | 35.0% | |
| AATTCACAAGCATACCTTAG+AGG | + | chr1.3:60568034-60568053 | None:intergenic | 35.0% | |
| AATTCATCTGTGCCGAATAT+AGG | + | chr1.3:60569296-60569315 | None:intergenic | 35.0% | |
| AATTCGAGATCAAAACACAC+GGG | - | chr1.3:60569081-60569100 | MS.gene20953:CDS | 35.0% | |
| AATTTCACGAGGATGATCAT+GGG | - | chr1.3:60567618-60567637 | MS.gene20953:CDS | 35.0% | |
| AGTAAGAAAATAGATGCGGA+GGG | - | chr1.3:60569566-60569585 | MS.gene20953:CDS | 35.0% | |
| AGTCAAGAAGATGCTTAATC+TGG | - | chr1.3:60568915-60568934 | MS.gene20953:intron | 35.0% | |
| ATATTCGGCACAGATGAATT+TGG | - | chr1.3:60569296-60569315 | MS.gene20953:CDS | 35.0% | |
| ATCACAAAGCCCCAATATAA+TGG | - | chr1.3:60568186-60568205 | MS.gene20953:CDS | 35.0% | |
| ATCTAGACAGCATCATTGAT+GGG | - | chr1.3:60569855-60569874 | MS.gene20953:intron | 35.0% | |
| ATGGATCTAGTGAAATGTGA+TGG | - | chr1.3:60568205-60568224 | MS.gene20953:CDS | 35.0% | |
| ATGTTGGAGAATACTGAGTT+GGG | - | chr1.3:60569758-60569777 | MS.gene20953:CDS | 35.0% | |
| ATTCATGACTTGACTAAGAG+AGG | + | chr1.3:60570081-60570100 | None:intergenic | 35.0% | |
| CAATTCGAGATCAAAACACA+CGG | - | chr1.3:60569080-60569099 | MS.gene20953:CDS | 35.0% | |
| CCACACAAAGTCAAATCAAA+TGG | + | chr1.3:60567812-60567831 | None:intergenic | 35.0% | |
| CCGAATAATGAATGATGTTG+CGG | - | chr1.3:60570121-60570140 | MS.gene20953:CDS | 35.0% | |
| CCGCAACATCATTCATTATT+CGG | + | chr1.3:60570124-60570143 | None:intergenic | 35.0% | |
| CCTTGTAATCTCCTTCAATT+CGG | + | chr1.3:60569241-60569260 | None:intergenic | 35.0% | |
| CGGTGAATAATCGCATAAAA+TGG | + | chr1.3:60567389-60567408 | None:intergenic | 35.0% | |
| CGTGACAATCAACTATCATA+CGG | + | chr1.3:60567754-60567773 | None:intergenic | 35.0% | |
| CTCTTAGTCAAGTCATGAAT+AGG | - | chr1.3:60570081-60570100 | MS.gene20953:CDS | 35.0% | |
| CTTATATGAGAAGGCAAATC+AGG | - | chr1.3:60569702-60569721 | MS.gene20953:CDS | 35.0% | |
| CTTCTGAGCAGTTATATCTT+GGG | + | chr1.3:60569198-60569217 | None:intergenic | 35.0% | |
| CTTGTAATCTCCTTCAATTC+GGG | + | chr1.3:60569240-60569259 | None:intergenic | 35.0% | |
| GATGGCTTATAAATTTCACG+AGG | - | chr1.3:60567607-60567626 | MS.gene20953:CDS | 35.0% | |
| GCAGCTATGATTAAGATAAC+TGG | - | chr1.3:60569338-60569357 | MS.gene20953:CDS | 35.0% | |
| GCTTTGTGATACAATACCTA+AGG | + | chr1.3:60568176-60568195 | None:intergenic | 35.0% | |
| GGATCTTCATGAAAATGTAG+TGG | - | chr1.3:60569157-60569176 | MS.gene20953:CDS | 35.0% | |
| GTACTTAATAAAGCGATGAC+TGG | - | chr1.3:60569470-60569489 | MS.gene20953:CDS | 35.0% | |
| TAACGATACTGTATGTGGAA+TGG | - | chr1.3:60568390-60568409 | MS.gene20953:CDS | 35.0% | |
| TAGGAGGGATTAATTGATTG+GGG | + | chr1.3:60569277-60569296 | None:intergenic | 35.0% | |
| TCATGAATAGGAGTAACACA+AGG | - | chr1.3:60570093-60570112 | MS.gene20953:CDS | 35.0% | |
| TCCATTTCAAAGTCTTTCCA+TGG | + | chr1.3:60568589-60568608 | None:intergenic | 35.0% | |
| TCTTCTGAGCAGTTATATCT+TGG | + | chr1.3:60569199-60569218 | None:intergenic | 35.0% | |
| TCTTGCAATGAACAAGGATA+GGG | + | chr1.3:60567355-60567374 | None:intergenic | 35.0% | |
| TGAACTAACAGGTTATGACA+GGG | - | chr1.3:60567583-60567602 | MS.gene20953:CDS | 35.0% | |
| TGAGCTCCAAATTTACAAGA+TGG | + | chr1.3:60570298-60570317 | None:intergenic | 35.0% | |
| TGCCTCTTTGTATTGTATTG+AGG | + | chr1.3:60567103-60567122 | None:intergenic | 35.0% | |
| TGGATCTAGTGAAATGTGAT+GGG | - | chr1.3:60568206-60568225 | MS.gene20953:CDS | 35.0% | |
| TGTTAGCCATATACTGCAAA+TGG | + | chr1.3:60567862-60567881 | None:intergenic | 35.0% | |
| TTCAATTGCTTCCTTGGTTA+TGG | - | chr1.3:60567886-60567905 | MS.gene20953:intron | 35.0% | |
| TTGAACTAACAGGTTATGAC+AGG | - | chr1.3:60567582-60567601 | MS.gene20953:CDS | 35.0% | |
| TTGTTCATTGCAAGACTTCT+GGG | - | chr1.3:60567360-60567379 | MS.gene20953:intron | 35.0% | |
| TTTGCAGTATATGGCTAACA+TGG | - | chr1.3:60567862-60567881 | MS.gene20953:intron | 35.0% | |
| TTTGTCATAACACTACACCA+AGG | - | chr1.3:60567996-60568015 | MS.gene20953:intron | 35.0% | |
| TTTGTGTGGTTCAACCTTAA+GGG | - | chr1.3:60567823-60567842 | MS.gene20953:CDS | 35.0% | |
| ! | ACATTTACTCACACTTGTTG+AGG | - | chr1.3:60568876-60568895 | MS.gene20953:intron | 35.0% |
| ! | ACCATGGAAAGACTTTGAAA+TGG | - | chr1.3:60568585-60568604 | MS.gene20953:CDS | 35.0% |
| ! | ATCAAAATTTCCGAGTTGAC+AGG | - | chr1.3:60568826-60568845 | MS.gene20953:intron | 35.0% |
| ! | ATCTTGTAAATTTGGAGCTC+AGG | - | chr1.3:60570297-60570316 | MS.gene20953:CDS | 35.0% |
| ! | CATCAAGAATTTTGCTAAGC+TGG | + | chr1.3:60569829-60569848 | None:intergenic | 35.0% |
| ! | GAAACAGAAAAGGTTCCTTT+TGG | - | chr1.3:60569497-60569516 | MS.gene20953:CDS | 35.0% |
| ! | GAGTTTGAAATGCTTGAGTA+TGG | + | chr1.3:60570330-60570349 | None:intergenic | 35.0% |
| ! | TAATAAAGCGATGACTGGTT+TGG | - | chr1.3:60569475-60569494 | MS.gene20953:CDS | 35.0% |
| ! | TAGTTGCCATTTGCAGTATA+TGG | - | chr1.3:60567853-60567872 | MS.gene20953:CDS | 35.0% |
| ! | TCTAAGACTATCACCATACA+AGG | + | chr1.3:60570165-60570184 | None:intergenic | 35.0% |
| !! | CCATCTATTCTAAGACAAGT+CGG | + | chr1.3:60570708-60570727 | None:intergenic | 35.0% |
| !! | CCATTTGATTTGACTTTGTG+TGG | - | chr1.3:60567809-60567828 | MS.gene20953:CDS | 35.0% |
| !! | GTAAGCTGTTGTTACTTTGT+TGG | + | chr1.3:60567081-60567100 | None:intergenic | 35.0% |
| !! | GTGATGGATAAAATGCTTCT+AGG | - | chr1.3:60569377-60569396 | MS.gene20953:CDS | 35.0% |
| !!! | TTCCTTTTGGTTTTCTCTCT+CGG | - | chr1.3:60569510-60569529 | MS.gene20953:CDS | 35.0% |
| AAAGCTAGCAAGCAACCAAA+AGG | + | chr1.3:60567137-60567156 | None:intergenic | 40.0% | |
| AACTCTTCCTTGCATTCATG+TGG | - | chr1.3:60569920-60569939 | MS.gene20953:CDS | 40.0% | |
| ACAAGCATACCTTAGAGGAA+AGG | + | chr1.3:60568029-60568048 | None:intergenic | 40.0% | |
| ACTGCAAATGGCAACTATGT+GGG | + | chr1.3:60567850-60567869 | None:intergenic | 40.0% | |
| AGATTGCAATCTTTGCCTAG+TGG | - | chr1.3:60567518-60567537 | MS.gene20953:intron | 40.0% | |
| AGCCAATCATCCAACAATTC+AGG | - | chr1.3:60566909-60566928 | MS.gene20953:CDS | 40.0% | |
| AGTCGAATCTGTATGGTACT+CGG | + | chr1.3:60568317-60568336 | None:intergenic | 40.0% | |
| ATAACAACCTGACCTCCATT+TGG | + | chr1.3:60570236-60570255 | None:intergenic | 40.0% | |
| ATATCTGGGTTTGCACTATC+CGG | - | chr1.3:60567679-60567698 | MS.gene20953:CDS | 40.0% | |
| ATCAATTCCACACCAAATGG+AGG | - | chr1.3:60570221-60570240 | MS.gene20953:CDS | 40.0% | |
| ATTGCTGAGGTAACAAAGAC+AGG | - | chr1.3:60567647-60567666 | MS.gene20953:CDS | 40.0% | |
| ATTTCACGAGGATGATCATG+GGG | - | chr1.3:60567619-60567638 | MS.gene20953:CDS | 40.0% | |
| CAAATCAGGAATCCTTTGTC+TGG | - | chr1.3:60569716-60569735 | MS.gene20953:CDS | 40.0% | |
| CAAGCATACCTTAGAGGAAA+GGG | + | chr1.3:60568028-60568047 | None:intergenic | 40.0% | |
| CAGAAGTCTTGCAATGAACA+AGG | + | chr1.3:60567361-60567380 | None:intergenic | 40.0% | |
| CATGGATTCAATTGCTTCCT+TGG | - | chr1.3:60567880-60567899 | MS.gene20953:intron | 40.0% | |
| CCGAATTGAAGGAGATTACA+AGG | - | chr1.3:60569238-60569257 | MS.gene20953:CDS | 40.0% | |
| CTTGTTCATTGCAAGACTTC+TGG | - | chr1.3:60567359-60567378 | MS.gene20953:intron | 40.0% | |
| CTTTGTGTGGTTCAACCTTA+AGG | - | chr1.3:60567822-60567841 | MS.gene20953:CDS | 40.0% | |
| GAAAACACAATCCCAGACAA+AGG | + | chr1.3:60569731-60569750 | None:intergenic | 40.0% | |
| GACAAATTCACCCGAATTGA+AGG | - | chr1.3:60569227-60569246 | MS.gene20953:CDS | 40.0% | |
| GAGAAACGCATCCAAAGATA+CGG | - | chr1.3:60568636-60568655 | MS.gene20953:CDS | 40.0% | |
| GAGTAAGAAAATAGATGCGG+AGG | - | chr1.3:60569565-60569584 | MS.gene20953:CDS | 40.0% | |
| GATCTAGACAGCATCATTGA+TGG | - | chr1.3:60569854-60569873 | MS.gene20953:intron | 40.0% | |
| GCATCCAAGATCATCATTCA+AGG | - | chr1.3:60568531-60568550 | MS.gene20953:CDS | 40.0% | |
| GCCAATCATCCAACAATTCA+GGG | - | chr1.3:60566910-60566929 | MS.gene20953:CDS | 40.0% | |
| GCCCATTATTTCCAAACATC+TGG | + | chr1.3:60570844-60570863 | None:intergenic | 40.0% | |
| GGAGATCAAGAAATAGTGCT+AGG | - | chr1.3:60566931-60566950 | MS.gene20953:CDS | 40.0% | |
| GGATCTAGTGAAATGTGATG+GGG | - | chr1.3:60568207-60568226 | MS.gene20953:CDS | 40.0% | |
| GGTCTGATATTGATATGTGG+TGG | + | chr1.3:60570687-60570706 | None:intergenic | 40.0% | |
| GTCGGTCTGATATTGATATG+TGG | + | chr1.3:60570690-60570709 | None:intergenic | 40.0% | |
| GTCTTGCAATGAACAAGGAT+AGG | + | chr1.3:60567356-60567375 | None:intergenic | 40.0% | |
| GTGGTGTGAAATTTGAACAC+AGG | - | chr1.3:60569939-60569958 | MS.gene20953:CDS | 40.0% | |
| TAAGCTATCTGAGTTCTGCA+TGG | + | chr1.3:60570426-60570445 | None:intergenic | 40.0% | |
| TACTGCAAATGGCAACTATG+TGG | + | chr1.3:60567851-60567870 | None:intergenic | 40.0% | |
| TACTTTCAGTCTCTTGAGAG+CGG | + | chr1.3:60569678-60569697 | None:intergenic | 40.0% | |
| TATGTCAGTTCCAATGCCAA+GGG | + | chr1.3:60567258-60567277 | None:intergenic | 40.0% | |
| TCAAACCAGTCGAATCTGTA+TGG | + | chr1.3:60568324-60568343 | None:intergenic | 40.0% | |
| TCAACATCCACTGCCAAAAT+AGG | + | chr1.3:60568784-60568803 | None:intergenic | 40.0% | |
| TCCATCAATTCCACACCAAA+TGG | - | chr1.3:60570218-60570237 | MS.gene20953:CDS | 40.0% | |
| TCCCTGAATTGTTGGATGAT+TGG | + | chr1.3:60566914-60566933 | None:intergenic | 40.0% | |
| TCTTGATCTCCCTGAATTGT+TGG | + | chr1.3:60566922-60566941 | None:intergenic | 40.0% | |
| TGATCAAACTACCGGTAACA+CGG | + | chr1.3:60567409-60567428 | None:intergenic | 40.0% | |
| TTATGTCAGTTCCAATGCCA+AGG | + | chr1.3:60567259-60567278 | None:intergenic | 40.0% | |
| TTCCGAGAGAGAAAACCAAA+AGG | + | chr1.3:60569515-60569534 | None:intergenic | 40.0% | |
| TTCCTTTGACTACTCGAGTT+CGG | - | chr1.3:60567013-60567032 | MS.gene20953:CDS | 40.0% | |
| TTGTCACGCAAAACATGTGA+AGG | - | chr1.3:60567766-60567785 | MS.gene20953:CDS | 40.0% | |
| TTGTGTAGCATAACACATGG+TGG | - | chr1.3:60570791-60570810 | MS.gene20953:CDS | 40.0% | |
| TTTAGACGAGAAAACGTGCA+AGG | - | chr1.3:60567154-60567173 | MS.gene20953:intron | 40.0% | |
| TTTCACACCACATGAATGCA+AGG | + | chr1.3:60569930-60569949 | None:intergenic | 40.0% | |
| ! | AACAGCAACAGTGCCTATTT+TGG | - | chr1.3:60568768-60568787 | MS.gene20953:CDS | 40.0% |
| ! | AGCATAACACATGGTGGAAA+TGG | - | chr1.3:60570797-60570816 | MS.gene20953:CDS | 40.0% |
| ! | CATAACACATGGTGGAAATG+GGG | - | chr1.3:60570799-60570818 | MS.gene20953:CDS | 40.0% |
| ! | CCGACTTGTCTTAGAATAGA+TGG | - | chr1.3:60570705-60570724 | MS.gene20953:CDS | 40.0% |
| ! | GAATTGTTGGATGATTGGCT+AGG | + | chr1.3:60566909-60566928 | None:intergenic | 40.0% |
| ! | GCATAACACATGGTGGAAAT+GGG | - | chr1.3:60570798-60570817 | MS.gene20953:CDS | 40.0% |
| ! | GGATAAAATGCTTCTAGGAG+AGG | - | chr1.3:60569382-60569401 | MS.gene20953:CDS | 40.0% |
| ! | TCTCTTATCTGAGGTTCACT+CGG | + | chr1.3:60568277-60568296 | None:intergenic | 40.0% |
| ! | TGATAGTCTTAGACTTCAGC+AGG | - | chr1.3:60570172-60570191 | MS.gene20953:CDS | 40.0% |
| ! | TTTTGGCAGTGGATGTTGAT+GGG | - | chr1.3:60568785-60568804 | MS.gene20953:CDS | 40.0% |
| !! | AATGGGCTAGAATCAGAAGA+GGG | - | chr1.3:60570857-60570876 | MS.gene20953:CDS | 40.0% |
| !! | ACAAAAGGCACTAGGATTTG+CGG | - | chr1.3:60567313-60567332 | MS.gene20953:intron | 40.0% |
| !! | AGATTCGACTGGTTTGAGTA+CGG | - | chr1.3:60568327-60568346 | MS.gene20953:CDS | 40.0% |
| !! | ATGCTTCTAGGAGAGGTTTT+CGG | - | chr1.3:60569389-60569408 | MS.gene20953:CDS | 40.0% |
| !! | ATTTTGGCAGTGGATGTTGA+TGG | - | chr1.3:60568784-60568803 | MS.gene20953:CDS | 40.0% |
| !! | GAAAAAGAGACTTTGGGGTT+TGG | - | chr1.3:60567970-60567989 | MS.gene20953:intron | 40.0% |
| !! | GACTGGTTTGGAAACAGAAA+AGG | - | chr1.3:60569487-60569506 | MS.gene20953:CDS | 40.0% |
| !! | GTTGTTACTTTGTTGGACCT+TGG | + | chr1.3:60567074-60567093 | None:intergenic | 40.0% |
| !! | TAATGGGCTAGAATCAGAAG+AGG | - | chr1.3:60570856-60570875 | MS.gene20953:CDS | 40.0% |
| !! | TCCATTTGGTGTGGAATTGA+TGG | + | chr1.3:60570222-60570241 | None:intergenic | 40.0% |
| !!! | TGTAGTGGGAGTTTGTTTTG+TGG | - | chr1.3:60569172-60569191 | MS.gene20953:CDS | 40.0% |
| !!! | TTTGGTTTTCTCTCTCGGAA+GGG | - | chr1.3:60569515-60569534 | MS.gene20953:CDS | 40.0% |
| !!! | TTTTGGTTTTCTCTCTCGGA+AGG | - | chr1.3:60569514-60569533 | MS.gene20953:CDS | 40.0% |
| AACAGGTTATGACAGGGTGA+TGG | - | chr1.3:60567589-60567608 | MS.gene20953:CDS | 45.0% | |
| AACTGCTCAGAAGACAGTCA+TGG | - | chr1.3:60569205-60569224 | MS.gene20953:CDS | 45.0% | |
| AGAGGAAAGGGAACAAACCT+TGG | + | chr1.3:60568016-60568035 | None:intergenic | 45.0% | |
| AGTTAATGCGTGTGCAAGCA+GGG | - | chr1.3:60569136-60569155 | MS.gene20953:CDS | 45.0% | |
| ATCGCGATGGAAACCTTGTA+TGG | - | chr1.3:60570149-60570168 | MS.gene20953:CDS | 45.0% | |
| ATGCTTAATCTGGCACTGCA+GGG | - | chr1.3:60568925-60568944 | MS.gene20953:intron | 45.0% | |
| ATTCACTCTGCATGAGGTAC+TGG | - | chr1.3:60570052-60570071 | MS.gene20953:CDS | 45.0% | |
| CAAAACACACGGGTCTAAGA+CGG | - | chr1.3:60569091-60569110 | MS.gene20953:CDS | 45.0% | |
| CATCTGTGCCGAATATAGGA+GGG | + | chr1.3:60569292-60569311 | None:intergenic | 45.0% | |
| CTGCAAAAAACAGAAGACCC+CGG | + | chr1.3:60569600-60569619 | None:intergenic | 45.0% | |
| CTGCAAATGGCAACTATGTG+GGG | + | chr1.3:60567849-60567868 | None:intergenic | 45.0% | |
| GACTACTACAGCCATAACCA+AGG | + | chr1.3:60567900-60567919 | None:intergenic | 45.0% | |
| GAGTACCATACAGATTCGAC+TGG | - | chr1.3:60568316-60568335 | MS.gene20953:CDS | 45.0% | |
| GCAGTCATGGGAACTTCATA+AGG | + | chr1.3:60567452-60567471 | None:intergenic | 45.0% | |
| GCGATTATTCACCGTGTTAC+CGG | - | chr1.3:60567395-60567414 | MS.gene20953:intron | 45.0% | |
| GGAAAGGCTTTGCGATACAA+TGG | - | chr1.3:60567547-60567566 | MS.gene20953:intron | 45.0% | |
| GGAACTTCATAAGGCTTCAC+TGG | + | chr1.3:60567443-60567462 | None:intergenic | 45.0% | |
| GGATAGTGCAAACCCAGATA+TGG | + | chr1.3:60567680-60567699 | None:intergenic | 45.0% | |
| GTCAATGACAGCGATGAAGA+TGG | - | chr1.3:60567917-60567936 | MS.gene20953:intron | 45.0% | |
| TAGTTAATGCGTGTGCAAGC+AGG | - | chr1.3:60569135-60569154 | MS.gene20953:CDS | 45.0% | |
| TATTGCACGGGATACTTGCT+AGG | + | chr1.3:60570618-60570637 | None:intergenic | 45.0% | |
| TCATCTGTGCCGAATATAGG+AGG | + | chr1.3:60569293-60569312 | None:intergenic | 45.0% | |
| TCGTTAAGTTTAAGAGCCCC+TGG | + | chr1.3:60568376-60568395 | None:intergenic | 45.0% | |
| TCTTAGACTTCAGCAGGTCT+TGG | - | chr1.3:60570178-60570197 | MS.gene20953:CDS | 45.0% | |
| TGCAATATTGCACAGACGCA+GGG | - | chr1.3:60570631-60570650 | MS.gene20953:CDS | 45.0% | |
| TGCATACAGTGAGAATGCAC+CGG | - | chr1.3:60567181-60567200 | MS.gene20953:intron | 45.0% | |
| TGCGTCTGTGCAATATTGCA+CGG | + | chr1.3:60570631-60570650 | None:intergenic | 45.0% | |
| TGTCCTAGCACAAGAGAACT+AGG | + | chr1.3:60570558-60570577 | None:intergenic | 45.0% | |
| TTGATGGGATGGTCAATGGT+TGG | - | chr1.3:60568800-60568819 | MS.gene20953:CDS | 45.0% | |
| TTGTGCTAGGACACTACCTT+AGG | - | chr1.3:60570565-60570584 | MS.gene20953:CDS | 45.0% | |
| TTTCCAATAGCTTCGCCAAC+CGG | + | chr1.3:60568856-60568875 | None:intergenic | 45.0% | |
| TTTGAAGATCGAAGGGATGC+AGG | - | chr1.3:60568705-60568724 | MS.gene20953:CDS | 45.0% | |
| ! | AAATAAAAAGCGCGCAGCCT+GGG | + | chr1.3:60567717-60567736 | None:intergenic | 45.0% |
| ! | ACACCTAGTTCTCTTGTGCT+AGG | - | chr1.3:60570552-60570571 | MS.gene20953:CDS | 45.0% |
| ! | ACAGGTCTAGAGCCATATCT+GGG | - | chr1.3:60567665-60567684 | MS.gene20953:CDS | 45.0% |
| ! | GATGTTGATGGGATGGTCAA+TGG | - | chr1.3:60568796-60568815 | MS.gene20953:CDS | 45.0% |
| ! | GGTTTGTTCCCTTTCCTCTA+AGG | - | chr1.3:60568017-60568036 | MS.gene20953:intron | 45.0% |
| ! | TAAATAAAAAGCGCGCAGCC+TGG | + | chr1.3:60567718-60567737 | None:intergenic | 45.0% |
| ! | TGAGAGCGGTTTGTTCAGAT+AGG | + | chr1.3:60569664-60569683 | None:intergenic | 45.0% |
| !! | AATTTGGCTGGTGTTGTGAG+TGG | - | chr1.3:60569312-60569331 | MS.gene20953:CDS | 45.0% |
| !! | CATGCAACTTTTGAGGAGTC+TGG | - | chr1.3:60566987-60567006 | MS.gene20953:CDS | 45.0% |
| !! | TTGATGGAGAGCATCAACCA+AGG | - | chr1.3:60567054-60567073 | MS.gene20953:CDS | 45.0% |
| !!! | AACAGTGCCTATTTTGGCAG+TGG | - | chr1.3:60568774-60568793 | MS.gene20953:CDS | 45.0% |
| !!! | TTTTGTAGCGCAGAAGCACT+CGG | + | chr1.3:60567299-60567318 | None:intergenic | 45.0% |
| !!! | TTTTTTGCAGCTAGCTAGCC+CGG | - | chr1.3:60569610-60569629 | MS.gene20953:CDS | 45.0% |
| AAAGCATGAACCTGGCGAAC+AGG | - | chr1.3:60568492-60568511 | MS.gene20953:CDS | 50.0% | |
| AACAGAAGACCCCGGTAACT+AGG | + | chr1.3:60569592-60569611 | None:intergenic | 50.0% | |
| AACCGGAAGACCTGTCAACT+CGG | + | chr1.3:60568839-60568858 | None:intergenic | 50.0% | |
| ACACTGCTGCAGAAATCCGA+TGG | - | chr1.3:60568461-60568480 | MS.gene20953:CDS | 50.0% | |
| ACTGCTGCAGAAATCCGATG+GGG | - | chr1.3:60568463-60568482 | MS.gene20953:CDS | 50.0% | |
| AGTCATGCTGTCCCTAGTGT+CGG | - | chr1.3:60567221-60567240 | MS.gene20953:intron | 50.0% | |
| ATCTTTGCCTAGTGGCAGCA+TGG | - | chr1.3:60567526-60567545 | MS.gene20953:intron | 50.0% | |
| CACCGAACTCGAGTAGTCAA+AGG | + | chr1.3:60567018-60567037 | None:intergenic | 50.0% | |
| CACTGCTGCAGAAATCCGAT+GGG | - | chr1.3:60568462-60568481 | MS.gene20953:CDS | 50.0% | |
| CAGGTACTTGGATCTCGAGA+TGG | - | chr1.3:60570025-60570044 | MS.gene20953:CDS | 50.0% | |
| CAGTGACGAGTGAGATGGTT+CGG | - | chr1.3:60568737-60568756 | MS.gene20953:CDS | 50.0% | |
| CTAGCAAGCAACCAAAAGGC+TGG | + | chr1.3:60567133-60567152 | None:intergenic | 50.0% | |
| CTCACCATGGTCAGCATTTC+CGG | + | chr1.3:60567203-60567222 | None:intergenic | 50.0% | |
| GAGTGCTTCTGCGCTACAAA+AGG | - | chr1.3:60567298-60567317 | MS.gene20953:intron | 50.0% | |
| GATAACTGGATGGAAGCGAG+AGG | - | chr1.3:60569352-60569371 | MS.gene20953:CDS | 50.0% | |
| GATCGAAGGGATGCAGGAAT+TGG | - | chr1.3:60568711-60568730 | MS.gene20953:CDS | 50.0% | |
| GATGCTTAATCTGGCACTGC+AGG | - | chr1.3:60568924-60568943 | MS.gene20953:intron | 50.0% | |
| GCGTCTGTGCAATATTGCAC+GGG | + | chr1.3:60570630-60570649 | None:intergenic | 50.0% | |
| GGCTGAATTCACTCTGCATG+AGG | - | chr1.3:60570046-60570065 | MS.gene20953:CDS | 50.0% | |
| GGCTTTCCTCGAAGTTGTGA+AGG | - | chr1.3:60568552-60568571 | MS.gene20953:CDS | 50.0% | |
| GTGCAATATTGCACAGACGC+AGG | - | chr1.3:60570630-60570649 | MS.gene20953:CDS | 50.0% | |
| TCCTCGAAGTTGTGAAGGCT+AGG | - | chr1.3:60568557-60568576 | MS.gene20953:CDS | 50.0% | |
| TCGGCACAGATGAATTTGGC+TGG | - | chr1.3:60569300-60569319 | MS.gene20953:CDS | 50.0% | |
| TGTCTGATGCAGGGTTTCCA+GGG | - | chr1.3:60568356-60568375 | MS.gene20953:CDS | 50.0% | |
| TTCCACACCAAATGGAGGTC+AGG | - | chr1.3:60570226-60570245 | MS.gene20953:CDS | 50.0% | |
| TTGTCTGATGCAGGGTTTCC+AGG | - | chr1.3:60568355-60568374 | MS.gene20953:CDS | 50.0% | |
| ! | AACACATGGTGGAAATGGGG+TGG | - | chr1.3:60570802-60570821 | MS.gene20953:CDS | 50.0% |
| ! | AACCTGACCTCCATTTGGTG+TGG | + | chr1.3:60570231-60570250 | None:intergenic | 50.0% |
| ! | AATAAAAAGCGCGCAGCCTG+GGG | + | chr1.3:60567716-60567735 | None:intergenic | 50.0% |
| ! | ACGGATAGCTTGTCTGATGC+AGG | - | chr1.3:60568346-60568365 | MS.gene20953:CDS | 50.0% |
| ! | CGGATAGCTTGTCTGATGCA+GGG | - | chr1.3:60568347-60568366 | MS.gene20953:CDS | 50.0% |
| ! | CGTGTCTCTGGTTCAGTTGA+TGG | - | chr1.3:60567038-60567057 | MS.gene20953:CDS | 50.0% |
| ! | GAATTTTGCTAAGCTGGCGC+TGG | + | chr1.3:60569823-60569842 | None:intergenic | 50.0% |
| ! | GACAGGTCTAGAGCCATATC+TGG | - | chr1.3:60567664-60567683 | MS.gene20953:CDS | 50.0% |
| ! | GCAGTGCTGAACCAGATGTT+TGG | - | chr1.3:60570830-60570849 | MS.gene20953:CDS | 50.0% |
| ! | TCCTAGCCTTCACAACTTCG+AGG | + | chr1.3:60568561-60568580 | None:intergenic | 50.0% |
| ! | TGAAGGCTAGGAGCATACCA+TGG | - | chr1.3:60568569-60568588 | MS.gene20953:CDS | 50.0% |
| ! | TGTAACGCTTGTTGCAGCTC+CGG | + | chr1.3:60569632-60569651 | None:intergenic | 50.0% |
| ! | TTCCGAGTTGACAGGTCTTC+CGG | - | chr1.3:60568834-60568853 | MS.gene20953:intron | 50.0% |
| !! | AAAGGCACTAGGATTTGCGG+AGG | - | chr1.3:60567316-60567335 | MS.gene20953:intron | 50.0% |
| !! | TCTGCGCTACAAAAGGCACT+AGG | - | chr1.3:60567305-60567324 | MS.gene20953:intron | 50.0% |
| AACTGGATGGAAGCGAGAGG+AGG | - | chr1.3:60569355-60569374 | MS.gene20953:CDS | 55.0% | |
| AATGCGCCTGCTGCAGTCAT+GGG | + | chr1.3:60567464-60567483 | None:intergenic | 55.0% | |
| AGCCTTTCCATGCTGCCACT+AGG | + | chr1.3:60567536-60567555 | None:intergenic | 55.0% | |
| AGGGACAGCATGACTCACCA+TGG | + | chr1.3:60567216-60567235 | None:intergenic | 55.0% | |
| ATGGAAGCGAGAGGAGGTGA+TGG | - | chr1.3:60569361-60569380 | MS.gene20953:CDS | 55.0% | |
| CAGTTCCAATGCCAAGGGCA+GGG | + | chr1.3:60567253-60567272 | None:intergenic | 55.0% | |
| CATGCTTTGCACCACCCCAT+CGG | + | chr1.3:60568480-60568499 | None:intergenic | 55.0% | |
| CTACCATCATCCTGTTCGCC+AGG | + | chr1.3:60568505-60568524 | None:intergenic | 55.0% | |
| CTGATGCGAGATGCACCCTT+AGG | - | chr1.3:60568157-60568176 | MS.gene20953:CDS | 55.0% | |
| CTTCCGGTTGGCGAAGCTAT+TGG | - | chr1.3:60568850-60568869 | MS.gene20953:intron | 55.0% | |
| GAACCTGGCGAACAGGATGA+TGG | - | chr1.3:60568499-60568518 | MS.gene20953:CDS | 55.0% | |
| GAAGTTCCCATGACTGCAGC+AGG | - | chr1.3:60567455-60567474 | MS.gene20953:intron | 55.0% | |
| GAGTTGACAGGTCTTCCGGT+TGG | - | chr1.3:60568838-60568857 | MS.gene20953:intron | 55.0% | |
| GCAACTATGTGGGGCCCTTA+AGG | + | chr1.3:60567840-60567859 | None:intergenic | 55.0% | |
| GCAGCAGCCCAAAAGTTGAG+AGG | - | chr1.3:60570983-60571002 | MS.gene20953:CDS | 55.0% | |
| GGAAGCAGTGACGAGTGAGA+TGG | - | chr1.3:60568732-60568751 | MS.gene20953:CDS | 55.0% | |
| GGTGGTGCAAAGCATGAACC+TGG | - | chr1.3:60568484-60568503 | MS.gene20953:CDS | 55.0% | |
| GTCTGATGCAGGGTTTCCAG+GGG | - | chr1.3:60568357-60568376 | MS.gene20953:CDS | 55.0% | |
| TAATGCGCCTGCTGCAGTCA+TGG | + | chr1.3:60567465-60567484 | None:intergenic | 55.0% | |
| TCACGAGGATGATCATGGGG+AGG | - | chr1.3:60567622-60567641 | MS.gene20953:CDS | 55.0% | |
| TCAGTTCCAATGCCAAGGGC+AGG | + | chr1.3:60567254-60567273 | None:intergenic | 55.0% | |
| TCATGGGGAGGTGATTGCTG+AGG | - | chr1.3:60567634-60567653 | MS.gene20953:CDS | 55.0% | |
| TGCACCGGAAATGCTGACCA+TGG | - | chr1.3:60567196-60567215 | MS.gene20953:intron | 55.0% | |
| TGCCTAGTGGCAGCATGGAA+AGG | - | chr1.3:60567531-60567550 | MS.gene20953:intron | 55.0% | |
| TGTTGCGGAGCATATCGCGA+TGG | - | chr1.3:60570136-60570155 | MS.gene20953:CDS | 55.0% | |
| ! | CACGGGTCTAAGACGGATTC+CGG | - | chr1.3:60569098-60569117 | MS.gene20953:CDS | 55.0% |
| ! | CTGGCGAACAGGATGATGGT+AGG | - | chr1.3:60568503-60568522 | MS.gene20953:CDS | 55.0% |
| ! | GGCAAGCAGATCCAGCCTTT+TGG | - | chr1.3:60567119-60567138 | MS.gene20953:intron | 55.0% |
| ! | GGCAGTGGATGTTGATGGGA+TGG | - | chr1.3:60568789-60568808 | MS.gene20953:CDS | 55.0% |
| ! | GTAACGCTTGTTGCAGCTCC+GGG | + | chr1.3:60569631-60569650 | None:intergenic | 55.0% |
| ACAACAGTGTCTGCGTGCGC+AGG | + | chr1.3:60568129-60568148 | None:intergenic | 60.0% | |
| ATGCGGAGGGCCTAGTTACC+GGG | - | chr1.3:60569579-60569598 | MS.gene20953:CDS | 60.0% | |
| CAGGGTGGTCACCGACACTA+GGG | + | chr1.3:60567235-60567254 | None:intergenic | 60.0% | |
| CGCAGCCTGGGGAATATCTG+TGG | + | chr1.3:60567705-60567724 | None:intergenic | 60.0% | |
| GATGCGGAGGGCCTAGTTAC+CGG | - | chr1.3:60569578-60569597 | MS.gene20953:CDS | 60.0% | |
| GCCTGGGGAATATCTGTGGC+CGG | + | chr1.3:60567701-60567720 | None:intergenic | 60.0% | |
| GCTGCAGAAATCCGATGGGG+TGG | - | chr1.3:60568466-60568485 | MS.gene20953:CDS | 60.0% | |
| TCCGGCCACAGATATTCCCC+AGG | - | chr1.3:60567697-60567716 | MS.gene20953:CDS | 60.0% | |
| TTCCAATGCCAAGGGCAGGG+TGG | + | chr1.3:60567250-60567269 | None:intergenic | 60.0% | |
| ! | GGATGATTGGCTAGGCCTCG+TGG | + | chr1.3:60566901-60566920 | None:intergenic | 60.0% |
| !! | TAGCGCAGAAGCACTCGGTG+CGG | + | chr1.3:60567294-60567313 | None:intergenic | 60.0% |
| !! | TCGAGTTCGGTGCGTGTCTC+TGG | - | chr1.3:60567026-60567045 | MS.gene20953:CDS | 60.0% |
| GACCACCCTGCCCTTGGCAT+TGG | - | chr1.3:60567245-60567264 | MS.gene20953:intron | 65.0% | |
| GCAGGGTGGTCACCGACACT+AGG | + | chr1.3:60567236-60567255 | None:intergenic | 65.0% | |
| TGCGGAGGGCCTAGTTACCG+GGG | - | chr1.3:60569580-60569599 | MS.gene20953:CDS | 65.0% | |
| GTCGGTGACCACCCTGCCCT+TGG | - | chr1.3:60567239-60567258 | MS.gene20953:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 60566891 | 60571009 | 60566891 | ID=MS.gene20953 |
| chr1.3 | mRNA | 60566891 | 60571009 | 60566891 | ID=MS.gene20953.t1;Parent=MS.gene20953 |
| chr1.3 | exon | 60569883 | 60571009 | 60569883 | ID=MS.gene20953.t1.exon1;Parent=MS.gene20953.t1 |
| chr1.3 | CDS | 60569883 | 60571009 | 60569883 | ID=cds.MS.gene20953.t1;Parent=MS.gene20953.t1 |
| chr1.3 | exon | 60568954 | 60569861 | 60568954 | ID=MS.gene20953.t1.exon2;Parent=MS.gene20953.t1 |
| chr1.3 | CDS | 60568954 | 60569861 | 60568954 | ID=cds.MS.gene20953.t1;Parent=MS.gene20953.t1 |
| chr1.3 | exon | 60568024 | 60568840 | 60568024 | ID=MS.gene20953.t1.exon3;Parent=MS.gene20953.t1 |
| chr1.3 | CDS | 60568024 | 60568840 | 60568024 | ID=cds.MS.gene20953.t1;Parent=MS.gene20953.t1 |
| chr1.3 | exon | 60567582 | 60567872 | 60567582 | ID=MS.gene20953.t1.exon4;Parent=MS.gene20953.t1 |
| chr1.3 | CDS | 60567582 | 60567872 | 60567582 | ID=cds.MS.gene20953.t1;Parent=MS.gene20953.t1 |
| chr1.3 | exon | 60566891 | 60567101 | 60566891 | ID=MS.gene20953.t1.exon5;Parent=MS.gene20953.t1 |
| chr1.3 | CDS | 60566891 | 60567101 | 60566891 | ID=cds.MS.gene20953.t1;Parent=MS.gene20953.t1 |
| Gene Sequence |
| Protein sequence |
