Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21049.t1 | XP_003591234.1 | 99.7 | 333 | 1 | 0 | 1 | 333 | 1 | 333 | 4.80E-189 | 670.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21049.t1 | Q9LZ98 | 82.9 | 333 | 51 | 2 | 1 | 332 | 1 | 328 | 4.6e-156 | 552.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21049.t1 | G7IAA4 | 99.7 | 333 | 1 | 0 | 1 | 333 | 1 | 333 | 3.5e-189 | 670.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052641 | MS.gene21049 | 0.818807 | 1.62E-52 | -1.69E-46 |
| MS.gene055505 | MS.gene21049 | 0.845296 | 4.44E-59 | -1.69E-46 |
| MS.gene056849 | MS.gene21049 | 0.823176 | 1.59E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21049.t1 | MTR_1g084720 | 99.700 | 333 | 1 | 0 | 1 | 333 | 1 | 333 | 0.0 | 678 |
| MS.gene21049.t1 | MTR_1g069750 | 55.431 | 267 | 111 | 5 | 6 | 270 | 10 | 270 | 6.37e-101 | 299 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21049.t1 | AT5G02270 | 83.483 | 333 | 49 | 3 | 1 | 332 | 1 | 328 | 0.0 | 527 |
| MS.gene21049.t1 | AT5G02270 | 77.437 | 359 | 49 | 4 | 1 | 332 | 1 | 354 | 0.0 | 512 |
| MS.gene21049.t1 | AT5G44110 | 56.589 | 258 | 101 | 4 | 6 | 261 | 5 | 253 | 1.46e-99 | 295 |
| MS.gene21049.t1 | AT1G03905 | 63.793 | 232 | 77 | 4 | 36 | 263 | 28 | 256 | 1.88e-99 | 295 |
| MS.gene21049.t1 | AT1G03905 | 62.500 | 200 | 64 | 4 | 67 | 263 | 1 | 192 | 8.92e-82 | 248 |
| MS.gene21049.t1 | AT1G03905 | 62.500 | 200 | 64 | 4 | 67 | 263 | 1 | 192 | 8.92e-82 | 248 |
| MS.gene21049.t1 | AT1G03905 | 62.500 | 200 | 64 | 4 | 67 | 263 | 1 | 192 | 8.92e-82 | 248 |
| MS.gene21049.t1 | AT5G44110 | 57.075 | 212 | 81 | 3 | 6 | 216 | 5 | 207 | 9.14e-79 | 239 |
| MS.gene21049.t1 | AT5G44110 | 62.667 | 150 | 50 | 2 | 67 | 216 | 1 | 144 | 1.46e-60 | 191 |
| MS.gene21049.t1 | AT5G44110 | 56.725 | 171 | 64 | 3 | 6 | 175 | 5 | 166 | 3.46e-59 | 190 |
Find 92 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAGAACACGAACCATTTC+AGG | 0.175968 | 1.4:+68687627 | None:intergenic |
| AATATATGTCATGCCTTAAA+TGG | 0.196234 | 1.4:+68683239 | None:intergenic |
| CCTGAAATGGTTCGTGTTCT+TGG | 0.211482 | 1.4:-68687627 | MS.gene21049:CDS |
| AGTTTCTTTGACTTTCTCTA+TGG | 0.218624 | 1.4:+68682817 | None:intergenic |
| GGGTCTCCTCAAACCATTTA+AGG | 0.220345 | 1.4:-68683252 | MS.gene21049:intron |
| TCTTTGATCTCAACCGTAAT+TGG | 0.227019 | 1.4:+68687916 | None:intergenic |
| CCTTTCCTAGGTTCTTCTTC+TGG | 0.235704 | 1.4:-68683120 | MS.gene21049:intron |
| TCTGGTGATCTTTGTTATCT+TGG | 0.240796 | 1.4:-68687570 | MS.gene21049:CDS |
| TCTGCCGAGAAAATGATATT+TGG | 0.245834 | 1.4:-68684132 | MS.gene21049:CDS |
| ATTAGCTCTGCTCTTCTTGC+AGG | 0.255307 | 1.4:+68684093 | None:intergenic |
| TCAACTTGCTTATCAAATTC+AGG | 0.268450 | 1.4:+68682480 | None:intergenic |
| GATACTACTTTAACTTCTTC+TGG | 0.277616 | 1.4:-68687588 | MS.gene21049:CDS |
| ACTACAATTCTGAAGATATT+AGG | 0.310572 | 1.4:-68687669 | MS.gene21049:CDS |
| AATATACATACAATATTTGT+TGG | 0.342577 | 1.4:+68682969 | None:intergenic |
| AAGAAGAGTGCAAATTTGTA+TGG | 0.373325 | 1.4:-68683273 | MS.gene21049:CDS |
| GAATTTGATAAGCAAGTTGA+TGG | 0.381823 | 1.4:-68682477 | MS.gene21049:CDS |
| TTCAGATTCAAAGCCAATTA+CGG | 0.384221 | 1.4:-68687929 | MS.gene21049:CDS |
| AAGAAGAGCAGAGCTAATTA+AGG | 0.392285 | 1.4:-68684088 | MS.gene21049:intron |
| TGCAGAGAACAGTAGAAGTT+TGG | 0.392482 | 1.4:-68682563 | MS.gene21049:intron |
| ACATATGGTGGAACCTGAAA+TGG | 0.405372 | 1.4:-68687640 | MS.gene21049:CDS |
| TATTAGACATCAATCTTTCA+TGG | 0.406448 | 1.4:-68683325 | MS.gene21049:CDS |
| ATAGAAGACAAAGGAAAGAA+AGG | 0.411481 | 1.4:-68682518 | MS.gene21049:CDS |
| TCAAAACTCGGTTTGAGCTT+AGG | 0.411975 | 1.4:+68682346 | None:intergenic |
| GGAGGATGACCGTCGATTCC+AGG | 0.422123 | 1.4:+68687877 | None:intergenic |
| GAGCTGAAATTCACTTATCC+TGG | 0.427324 | 1.4:-68687895 | MS.gene21049:CDS |
| CACTCTTCTTCTTTGACCAT+CGG | 0.430083 | 1.4:+68683286 | None:intergenic |
| CCTTCTGAAGTTTCTAAGAA+AGG | 0.430504 | 1.4:-68683057 | MS.gene21049:CDS |
| CGGTTACATTCCACCATTGC+CGG | 0.435159 | 1.4:-68682384 | MS.gene21049:CDS |
| CCGGTTCGAGTTACTAATAA+TGG | 0.435246 | 1.4:-68682420 | MS.gene21049:CDS |
| GGTGATCTTTGTTATCTTGG+TGG | 0.436365 | 1.4:-68687567 | MS.gene21049:CDS |
| GCAGAAATGTCCATCTGTAT+TGG | 0.437756 | 1.4:+68684150 | None:intergenic |
| TGCCTTCTCGTTGGATCCAA+TGG | 0.439598 | 1.4:-68687796 | MS.gene21049:CDS |
| TTCTCTCTCAATCTCTTCTC+CGG | 0.439832 | 1.4:-68687826 | MS.gene21049:CDS |
| GAAATGCTCAATTAGCGGTT+TGG | 0.442612 | 1.4:+68687846 | None:intergenic |
| TATGCAACACATATATTTGA+CGG | 0.455846 | 1.4:-68683005 | MS.gene21049:CDS |
| AACTAGCAAACTGTCACTAA+TGG | 0.457560 | 1.4:-68682798 | MS.gene21049:intron |
| ACTAATAATGGCTGGGCCGC+AGG | 0.461635 | 1.4:-68682408 | MS.gene21049:CDS |
| GTTTCTTTGACTTTCTCTAT+GGG | 0.462744 | 1.4:+68682818 | None:intergenic |
| TTCGAGTTACTAATAATGGC+TGG | 0.463711 | 1.4:-68682416 | MS.gene21049:CDS |
| AAAATGATATTTGGTGTGGC+TGG | 0.465667 | 1.4:-68684123 | MS.gene21049:CDS |
| AGGGGATCCTGCACGAGCTC+CGG | 0.470810 | 1.4:-68682439 | MS.gene21049:CDS |
| TATTTGACGGTCTTGAGGAT+TGG | 0.475920 | 1.4:-68682992 | MS.gene21049:CDS |
| AGAGAAATTACCAGCGCCAT+TGG | 0.480559 | 1.4:+68687780 | None:intergenic |
| GTTGATGGAAGCCGTGTAGT+TGG | 0.483883 | 1.4:-68682462 | MS.gene21049:CDS |
| AACGAGAAGGCACCGATCAC+CGG | 0.485960 | 1.4:+68687807 | None:intergenic |
| TCAATCTCTTCTCCGGTGAT+CGG | 0.491607 | 1.4:-68687819 | MS.gene21049:CDS |
| AGAGAGAAATGCTCAATTAG+CGG | 0.499738 | 1.4:+68687841 | None:intergenic |
| GTCATGCCTTAAATGGTTTG+AGG | 0.502728 | 1.4:+68683246 | None:intergenic |
| TCAATTAGCGGTTTGGAACC+CGG | 0.503241 | 1.4:+68687853 | None:intergenic |
| CCATTATTAGTAACTCGAAC+CGG | 0.503384 | 1.4:+68682420 | None:intergenic |
| TATCAGGTTTATGTTGCTCA+TGG | 0.505115 | 1.4:-68682860 | MS.gene21049:intron |
| AGGTTTATGTTGCTCATGGA+AGG | 0.510815 | 1.4:-68682856 | MS.gene21049:CDS |
| TTATGTTGCTCATGGAAGGC+TGG | 0.512155 | 1.4:-68682852 | MS.gene21049:CDS |
| CTCGTTGGATCCAATGGCGC+TGG | 0.512963 | 1.4:-68687790 | MS.gene21049:intron |
| AGCGGTTTGGAACCCGGCGG+AGG | 0.521968 | 1.4:+68687859 | None:intergenic |
| AATCGACGGTCATCCTCCGC+CGG | 0.525327 | 1.4:-68687872 | MS.gene21049:CDS |
| ACTCGAACCGGAGCTCGTGC+AGG | 0.533231 | 1.4:+68682432 | None:intergenic |
| AAGAAAGGAATGTGATGAGA+GGG | 0.539356 | 1.4:-68683042 | MS.gene21049:CDS |
| GATATTAGGAGGGAAACATA+TGG | 0.550354 | 1.4:-68687655 | MS.gene21049:CDS |
| AGGAAAGAAAGGAAGGCTGC+TGG | 0.552158 | 1.4:-68682507 | MS.gene21049:CDS |
| AAATGATATTTGGTGTGGCT+GGG | 0.553247 | 1.4:-68684122 | MS.gene21049:CDS |
| GGTGATCGGTGCCTTCTCGT+TGG | 0.553650 | 1.4:-68687805 | MS.gene21049:CDS |
| ACATATATTTGACGGTCTTG+AGG | 0.557218 | 1.4:-68682997 | MS.gene21049:CDS |
| GATGGAAGCCGTGTAGTTGG+AGG | 0.557443 | 1.4:-68682459 | MS.gene21049:CDS |
| CTTTGAAGTTCCAATACAGA+TGG | 0.561595 | 1.4:-68684160 | MS.gene21049:CDS |
| AAGACAAAGGAAAGAAAGGA+AGG | 0.565520 | 1.4:-68682514 | MS.gene21049:CDS |
| GAACAGTAGAAGTTTGGCTA+CGG | 0.570397 | 1.4:-68682557 | MS.gene21049:CDS |
| ACAATTCTGAAGATATTAGG+AGG | 0.572545 | 1.4:-68687666 | MS.gene21049:CDS |
| ATGGAAGCCGTGTAGTTGGA+GGG | 0.572562 | 1.4:-68682458 | MS.gene21049:CDS |
| ATCGACGGTCATCCTCCGCC+GGG | 0.574996 | 1.4:-68687871 | MS.gene21049:CDS |
| TTCACTTATCCTGGAATCGA+CGG | 0.578787 | 1.4:-68687886 | MS.gene21049:CDS |
| AAACTCGGTTTGAGCTTAGG+AGG | 0.579078 | 1.4:+68682349 | None:intergenic |
| AGAAGAGTGCAAATTTGTAT+GGG | 0.581883 | 1.4:-68683272 | MS.gene21049:CDS |
| TCGAGTTACTAATAATGGCT+GGG | 0.593054 | 1.4:-68682415 | MS.gene21049:CDS |
| TCTTTGTTATCTTGGTGGTG+AGG | 0.593435 | 1.4:-68687562 | MS.gene21049:intron |
| CAGCTCTTGCTAGAACATCA+AGG | 0.597648 | 1.4:+68683081 | None:intergenic |
| CGCCATTGGATCCAACGAGA+AGG | 0.598957 | 1.4:+68687794 | None:intergenic |
| CCTTTCTTAGAAACTTCAGA+AGG | 0.599066 | 1.4:+68683057 | None:intergenic |
| TAAGAAAGGAATGTGATGAG+AGG | 0.615451 | 1.4:-68683043 | MS.gene21049:CDS |
| AGTAGAAGTTTGGCTACGGA+AGG | 0.617342 | 1.4:-68682553 | MS.gene21049:CDS |
| ATAATGGCTGGGCCGCAGGT+CGG | 0.623795 | 1.4:-68682404 | MS.gene21049:CDS |
| CTTGCTTATCAAATTCAGGA+AGG | 0.634035 | 1.4:+68682484 | None:intergenic |
| ATTAGGAGGGAAACATATGG+TGG | 0.662252 | 1.4:-68687652 | MS.gene21049:CDS |
| CAGGATCCCCTCCAACTACA+CGG | 0.662648 | 1.4:+68682451 | None:intergenic |
| CAATTCTGAAGATATTAGGA+GGG | 0.663049 | 1.4:-68687665 | MS.gene21049:CDS |
| TGGAAGCCGTGTAGTTGGAG+GGG | 0.669936 | 1.4:-68682457 | MS.gene21049:CDS |
| GGTGGAATGTAACCGACCTG+CGG | 0.673773 | 1.4:+68682392 | None:intergenic |
| AGATTGCATAAAGTATCCGA+TGG | 0.675760 | 1.4:-68683302 | MS.gene21049:CDS |
| CGAGAAAATGATATTTGGTG+TGG | 0.678669 | 1.4:-68684127 | MS.gene21049:CDS |
| AGAAAGGAATGTGATGAGAG+GGG | 0.702733 | 1.4:-68683041 | MS.gene21049:CDS |
| GAGATGAAGATAGAAGACAA+AGG | 0.719714 | 1.4:-68682527 | MS.gene21049:CDS |
| ATTAGCGGTTTGGAACCCGG+CGG | 0.782107 | 1.4:+68687856 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATAAAGAAAATCTTT+GGG | - | chr1.4:68686682-68686701 | MS.gene21049:intron | 10.0% |
| !! | TAAAATATAAAGAAAATCTT+TGG | - | chr1.4:68686681-68686700 | MS.gene21049:intron | 10.0% |
| !! | TTTATAATAATAAAGGATAA+AGG | - | chr1.4:68685384-68685403 | MS.gene21049:intron | 10.0% |
| !! | AAATATAAAGAAAATCTTTG+GGG | - | chr1.4:68686683-68686702 | MS.gene21049:intron | 15.0% |
| !! | AAGTTATATTATATAACCTA+TGG | - | chr1.4:68687600-68687619 | MS.gene21049:CDS | 15.0% |
| !! | AATATACATACAATATTTGT+TGG | + | chr1.4:68687318-68687337 | None:intergenic | 15.0% |
| !! | AATGTAATTAATAAACTTGA+TGG | + | chr1.4:68683084-68683103 | None:intergenic | 15.0% |
| !! | CAAAAATAAATTAATCCAAA+CGG | + | chr1.4:68685602-68685621 | None:intergenic | 15.0% |
| !! | TTAGCAATAAATATATGTTT+AGG | - | chr1.4:68684668-68684687 | MS.gene21049:intron | 15.0% |
| !!! | GCTATCATTATTTTAAATTA+GGG | + | chr1.4:68682854-68682873 | None:intergenic | 15.0% |
| !!! | TATAATATAACTTGTATTCA+AGG | + | chr1.4:68687593-68687612 | None:intergenic | 15.0% |
| !!! | TCTAGCTTTTATAATAATAA+AGG | - | chr1.4:68685377-68685396 | MS.gene21049:intron | 15.0% |
| !!! | TGCTATCATTATTTTAAATT+AGG | + | chr1.4:68682855-68682874 | None:intergenic | 15.0% |
| !!! | TGGTTTGTTTTTTTTTTTTT+GGG | - | chr1.4:68686064-68686083 | MS.gene21049:intron | 15.0% |
| !!! | TTGGTTTGTTTTTTTTTTTT+TGG | - | chr1.4:68686063-68686082 | MS.gene21049:intron | 15.0% |
| !! | ATCTGTATCGTATAATTATA+AGG | + | chr1.4:68683471-68683490 | None:intergenic | 20.0% |
| !! | ATGATAGAAGTAATTATTCA+TGG | + | chr1.4:68686357-68686376 | None:intergenic | 20.0% |
| !! | ATTATTATAAAAGCTAGACT+TGG | + | chr1.4:68685375-68685394 | None:intergenic | 20.0% |
| !! | ATTGCATAAATGTATATCAA+AGG | - | chr1.4:68684237-68684256 | MS.gene21049:intron | 20.0% |
| !! | CAATAAATATATGTTTAGGA+GGG | - | chr1.4:68684672-68684691 | MS.gene21049:intron | 20.0% |
| !! | GATTGATAAAATACTTAGTT+TGG | - | chr1.4:68683703-68683722 | MS.gene21049:intron | 20.0% |
| !! | GTAATAAATGCTAATCAAAT+CGG | + | chr1.4:68684861-68684880 | None:intergenic | 20.0% |
| !! | TACCAAACTAACTTATAATA+CGG | - | chr1.4:68683591-68683610 | MS.gene21049:intron | 20.0% |
| !! | TATATGCTTGAATTTGATAT+TGG | - | chr1.4:68686750-68686769 | MS.gene21049:intron | 20.0% |
| !! | TCTGTATCGTATAATTATAA+GGG | + | chr1.4:68683470-68683489 | None:intergenic | 20.0% |
| !! | TGTAATATCTAAACATGAAA+AGG | + | chr1.4:68687096-68687115 | None:intergenic | 20.0% |
| !!! | AAATTGAAATTTGTAGGTTT+TGG | + | chr1.4:68685947-68685966 | None:intergenic | 20.0% |
| !!! | AACTTGATACAATACTTTTA+AGG | + | chr1.4:68683443-68683462 | None:intergenic | 20.0% |
| !!! | ATTATAAGTTAGTTTGGTAA+GGG | + | chr1.4:68683590-68683609 | None:intergenic | 20.0% |
| !!! | TATAATCGATTTACAATTGT+TGG | + | chr1.4:68683664-68683683 | None:intergenic | 20.0% |
| !!! | TATTATAAGTTAGTTTGGTA+AGG | + | chr1.4:68683591-68683610 | None:intergenic | 20.0% |
| !!! | TGTTTTTTTTTTTTTGGGAT+GGG | - | chr1.4:68686069-68686088 | MS.gene21049:intron | 20.0% |
| !!! | TTGTTTTTTTTTTTTTGGGA+TGG | - | chr1.4:68686068-68686087 | MS.gene21049:intron | 20.0% |
| !!! | TTTGATTTTTTGTTGTTACT+AGG | - | chr1.4:68682588-68682607 | MS.gene21049:intron | 20.0% |
| ! | AAAATAGAGTTTCAATCAAC+GGG | - | chr1.4:68684635-68684654 | MS.gene21049:intron | 25.0% |
| ! | AAAATAGAGTTTGAATCAAC+GGG | - | chr1.4:68684598-68684617 | MS.gene21049:intron | 25.0% |
| ! | AATAGATTGCTAACATTTCA+AGG | - | chr1.4:68684021-68684040 | MS.gene21049:intron | 25.0% |
| ! | AATATATGTCATGCCTTAAA+TGG | + | chr1.4:68687048-68687067 | None:intergenic | 25.0% |
| ! | AATTAATTATTAGCAAGTGC+AGG | + | chr1.4:68685428-68685447 | None:intergenic | 25.0% |
| ! | ACACATATAATTGATTGAGA+AGG | + | chr1.4:68687524-68687543 | None:intergenic | 25.0% |
| ! | AGATTAGATTAGCAATTAGT+AGG | - | chr1.4:68684823-68684842 | MS.gene21049:intron | 25.0% |
| ! | ATAATGATAGCAAATCGATA+AGG | - | chr1.4:68682863-68682882 | MS.gene21049:intron | 25.0% |
| ! | ATACGTTACGAAATATTTCA+TGG | - | chr1.4:68682925-68682944 | MS.gene21049:intron | 25.0% |
| ! | ATAGTTATATGTGTACATAG+AGG | - | chr1.4:68684183-68684202 | MS.gene21049:CDS | 25.0% |
| ! | ATTAATTATTAGCAAGTGCA+GGG | + | chr1.4:68685427-68685446 | None:intergenic | 25.0% |
| ! | CTCTGTTTAGTAAAAAATAG+CGG | + | chr1.4:68685987-68686006 | None:intergenic | 25.0% |
| ! | GAAAATAGAGTTTCAATCAA+CGG | - | chr1.4:68684634-68684653 | MS.gene21049:intron | 25.0% |
| ! | GAAAATAGAGTTTGAATCAA+CGG | - | chr1.4:68684597-68684616 | MS.gene21049:intron | 25.0% |
| ! | GATAGCAAATTGAAATTTGT+AGG | + | chr1.4:68685953-68685972 | None:intergenic | 25.0% |
| ! | GATTAGATTAGCAATTAGTA+GGG | - | chr1.4:68685293-68685312 | MS.gene21049:intron | 25.0% |
| ! | GCAATAAATATATGTTTAGG+AGG | - | chr1.4:68684671-68684690 | MS.gene21049:intron | 25.0% |
| ! | GGATAAAGGATTATACTAAT+TGG | - | chr1.4:68685398-68685417 | MS.gene21049:intron | 25.0% |
| ! | GTGTATTTGATGAAATCTAA+AGG | - | chr1.4:68683540-68683559 | MS.gene21049:intron | 25.0% |
| ! | GTTAGAAATTATCATGCAAA+TGG | - | chr1.4:68683265-68683284 | MS.gene21049:CDS | 25.0% |
| ! | TACCGTATTATAAGTTAGTT+TGG | + | chr1.4:68683596-68683615 | None:intergenic | 25.0% |
| ! | TATATGCTTCTCATATTAGT+TGG | - | chr1.4:68683339-68683358 | MS.gene21049:intron | 25.0% |
| ! | TATCGTATAATTATAAGGGT+TGG | + | chr1.4:68683466-68683485 | None:intergenic | 25.0% |
| ! | TATGCAACACATATATTTGA+CGG | - | chr1.4:68687279-68687298 | MS.gene21049:intron | 25.0% |
| ! | TATTAGACATCAATCTTTCA+TGG | - | chr1.4:68686959-68686978 | MS.gene21049:intron | 25.0% |
| ! | TATTATATAACCTATGGTTG+TGG | - | chr1.4:68687606-68687625 | MS.gene21049:CDS | 25.0% |
| ! | TCGCTTATATATGATATCTA+CGG | - | chr1.4:68684744-68684763 | MS.gene21049:intron | 25.0% |
| ! | TGCATATATATAGTTGTCTT+TGG | - | chr1.4:68686894-68686913 | MS.gene21049:intron | 25.0% |
| ! | TGTGATTAAGTGTGAAAATA+CGG | - | chr1.4:68684941-68684960 | MS.gene21049:intron | 25.0% |
| ! | TTACAAAACCATCAACATAA+AGG | - | chr1.4:68683727-68683746 | MS.gene21049:intron | 25.0% |
| ! | TTAGTCAAATACTCTTATTG+TGG | + | chr1.4:68686547-68686566 | None:intergenic | 25.0% |
| ! | TTCTATCAAATTGCTAATGT+GGG | - | chr1.4:68686037-68686056 | MS.gene21049:intron | 25.0% |
| ! | TTGAATTAATTGTGCCTAAT+TGG | - | chr1.4:68687689-68687708 | MS.gene21049:intron | 25.0% |
| ! | TTTCTATCAAATTGCTAATG+TGG | - | chr1.4:68686036-68686055 | MS.gene21049:intron | 25.0% |
| ! | TTTGTTTATATTTCATCGCA+CGG | + | chr1.4:68682798-68682817 | None:intergenic | 25.0% |
| !! | ACTACAATTCTGAAGATATT+AGG | - | chr1.4:68682615-68682634 | MS.gene21049:intron | 25.0% |
| !! | AGTACGTAATGATAAAGTTT+TGG | + | chr1.4:68686816-68686835 | None:intergenic | 25.0% |
| !! | ATTTTCAGAGTTTGAATCAA+CGG | - | chr1.4:68684917-68684936 | MS.gene21049:intron | 25.0% |
| !! | GAATTTTATCAAACCTCTAA+TGG | + | chr1.4:68684083-68684102 | None:intergenic | 25.0% |
| !! | TTGAATTTGATATTGGTTGA+TGG | - | chr1.4:68686757-68686776 | MS.gene21049:intron | 25.0% |
| !! | TTTTATCCATTGATAAGTGT+TGG | - | chr1.4:68683290-68683309 | MS.gene21049:CDS | 25.0% |
| !!! | AGAGCAATTTTTTACTTGTA+AGG | - | chr1.4:68687132-68687151 | MS.gene21049:intron | 25.0% |
| !!! | GTTTTTTTTTTTTTGGGATG+GGG | - | chr1.4:68686070-68686089 | MS.gene21049:intron | 25.0% |
| !!! | TTGCTGGATTGTTTTTATTT+TGG | + | chr1.4:68683782-68683801 | None:intergenic | 25.0% |
| AAAGGTCATGATAAATGCTT+GGG | - | chr1.4:68684255-68684274 | MS.gene21049:intron | 30.0% | |
| AACAACTTAAATTGTAGACC+AGG | - | chr1.4:68687633-68687652 | MS.gene21049:CDS | 30.0% | |
| AAGTTATACGAGAGAAAATG+AGG | - | chr1.4:68684569-68684588 | MS.gene21049:intron | 30.0% | |
| AATTAGTAGGGAAAAATGCT+AGG | - | chr1.4:68685305-68685324 | MS.gene21049:intron | 30.0% | |
| ACAATTACAGATGCATAATG+TGG | + | chr1.4:68683407-68683426 | None:intergenic | 30.0% | |
| ATAAATGCTTGGGTGTTTAA+TGG | - | chr1.4:68684265-68684284 | MS.gene21049:intron | 30.0% | |
| ATAACACAAACGAAATCATG+AGG | - | chr1.4:68683681-68683700 | MS.gene21049:intron | 30.0% | |
| ATACAGATGAAAAGTGAGAT+TGG | - | chr1.4:68683483-68683502 | MS.gene21049:intron | 30.0% | |
| ATAGAAGACAAAGGAAAGAA+AGG | - | chr1.4:68687766-68687785 | MS.gene21049:intron | 30.0% | |
| ATCGCATTAAATGATAGCAA+GGG | - | chr1.4:68684382-68684401 | MS.gene21049:intron | 30.0% | |
| ATCTAATGCCTTTATGTTGA+TGG | + | chr1.4:68683738-68683757 | None:intergenic | 30.0% | |
| ATGGTAAACGACATTTGATA+GGG | - | chr1.4:68682944-68682963 | MS.gene21049:intron | 30.0% | |
| ATTAGTAGGGAAAAATGCTA+GGG | - | chr1.4:68685306-68685325 | MS.gene21049:intron | 30.0% | |
| CAAAATGTTAGACTTCTAAG+TGG | + | chr1.4:68683008-68683027 | None:intergenic | 30.0% | |
| CAGCTTATAACAATGAAAAC+TGG | - | chr1.4:68683631-68683650 | MS.gene21049:intron | 30.0% | |
| CTGCATATTCAAAACCAATT+AGG | + | chr1.4:68687706-68687725 | None:intergenic | 30.0% | |
| GGGATGATGTTAAAAAGAAA+AGG | + | chr1.4:68683570-68683589 | None:intergenic | 30.0% | |
| GTATATTCATAAGCTTGTCA+AGG | - | chr1.4:68685663-68685682 | MS.gene21049:intron | 30.0% | |
| GTGGAGCATATATAAACAAA+TGG | + | chr1.4:68683388-68683407 | None:intergenic | 30.0% | |
| GTGTGAAAATAGAGTTTGAA+CGG | - | chr1.4:68684797-68684816 | MS.gene21049:intron | 30.0% | |
| TAACCATACCAAAATAGCAA+TGG | + | chr1.4:68686599-68686618 | None:intergenic | 30.0% | |
| TAATGTTCACTTACAATGCA+TGG | - | chr1.4:68686843-68686862 | MS.gene21049:intron | 30.0% | |
| TAGATTAGCAATTAGTGCAA+GGG | - | chr1.4:68684827-68684846 | MS.gene21049:intron | 30.0% | |
| TGTATGTAAACTGCAAACAA+AGG | - | chr1.4:68684111-68684130 | MS.gene21049:CDS | 30.0% | |
| TGTGAAAATAGAGTTTGAAC+GGG | - | chr1.4:68684798-68684817 | MS.gene21049:intron | 30.0% | |
| TTAGATTAGCAATTAGTGCA+AGG | - | chr1.4:68684826-68684845 | MS.gene21049:intron | 30.0% | |
| TTCAGAACTGAAATTACAGA+AGG | + | chr1.4:68687349-68687368 | None:intergenic | 30.0% | |
| TTCAGATTCAAAGCCAATTA+CGG | - | chr1.4:68682355-68682374 | MS.gene21049:CDS | 30.0% | |
| TTGATTAGGGTAATGAAATC+AGG | + | chr1.4:68682754-68682773 | None:intergenic | 30.0% | |
| TTGTTTATATTTCATCGCAC+GGG | + | chr1.4:68682797-68682816 | None:intergenic | 30.0% | |
| TTTAGGAGGGAAAAATACTA+GGG | - | chr1.4:68684685-68684704 | MS.gene21049:intron | 30.0% | |
| ! | AAGAAGAGTGCAAATTTGTA+TGG | - | chr1.4:68687011-68687030 | MS.gene21049:intron | 30.0% |
| ! | AAGGAGGTCTAAAATTGTAT+CGG | + | chr1.4:68685482-68685501 | None:intergenic | 30.0% |
| ! | ACAATTCTGAAGATATTAGG+AGG | - | chr1.4:68682618-68682637 | MS.gene21049:intron | 30.0% |
| ! | AGAAGAGTGCAAATTTGTAT+GGG | - | chr1.4:68687012-68687031 | MS.gene21049:intron | 30.0% |
| ! | AGTTTCTTTGACTTTCTCTA+TGG | + | chr1.4:68687470-68687489 | None:intergenic | 30.0% |
| ! | CAATTCTGAAGATATTAGGA+GGG | - | chr1.4:68682619-68682638 | MS.gene21049:intron | 30.0% |
| ! | CACACCAAATATCATTTTCT+CGG | + | chr1.4:68686159-68686178 | None:intergenic | 30.0% |
| ! | CATTTCAATGCTCTTTTATC+AGG | - | chr1.4:68687408-68687427 | MS.gene21049:intron | 30.0% |
| ! | GAATTTGATAAGCAAGTTGA+TGG | - | chr1.4:68687807-68687826 | MS.gene21049:CDS | 30.0% |
| ! | GATACTACTTTAACTTCTTC+TGG | - | chr1.4:68682696-68682715 | MS.gene21049:intron | 30.0% |
| ! | GTTTCTTTGACTTTCTCTAT+GGG | + | chr1.4:68687469-68687488 | None:intergenic | 30.0% |
| ! | TATAAAGAAAATCTTTGGGG+TGG | - | chr1.4:68686686-68686705 | MS.gene21049:intron | 30.0% |
| ! | TCAACTTGCTTATCAAATTC+AGG | + | chr1.4:68687807-68687826 | None:intergenic | 30.0% |
| ! | TTATAAAAGCTAGACTTGGT+TGG | + | chr1.4:68685371-68685390 | None:intergenic | 30.0% |
| ! | TTTTCAGAGTTTGAATCAAC+GGG | - | chr1.4:68684918-68684937 | MS.gene21049:intron | 30.0% |
| ! | TTTTGTTCTGATGTTCAACT+TGG | - | chr1.4:68686932-68686951 | MS.gene21049:intron | 30.0% |
| !! | AGAATGAGAGTCATTGATTT+AGG | - | chr1.4:68685512-68685531 | MS.gene21049:intron | 30.0% |
| !! | CCAATCTCAATTTTGTTTGA+CGG | - | chr1.4:68683879-68683898 | MS.gene21049:intron | 30.0% |
| !! | GTAGGTTTTGGTAAAATTAG+CGG | + | chr1.4:68685935-68685954 | None:intergenic | 30.0% |
| !! | GTGTGTTATTCGTTTTCAAT+TGG | - | chr1.4:68684538-68684557 | MS.gene21049:intron | 30.0% |
| !! | TCATTGATTTAGGCTATGTT+TGG | - | chr1.4:68685522-68685541 | MS.gene21049:intron | 30.0% |
| !! | TTGTGCAATTTTAGTCCTAT+TGG | + | chr1.4:68683842-68683861 | None:intergenic | 30.0% |
| !!! | TTTCCATTGCTATTTTGGTA+TGG | - | chr1.4:68686593-68686612 | MS.gene21049:intron | 30.0% |
| AAATTGCTAATGTGGGTGAT+TGG | - | chr1.4:68686044-68686063 | MS.gene21049:intron | 35.0% | |
| AAATTGTAAATTGCACAGCC+TGG | + | chr1.4:68687654-68687673 | None:intergenic | 35.0% | |
| AAATTTCTTCATGTCAGACG+AGG | - | chr1.4:68686278-68686297 | MS.gene21049:intron | 35.0% | |
| AACAGATGCAAAATGCCAAT+AGG | - | chr1.4:68683824-68683843 | MS.gene21049:intron | 35.0% | |
| AACTAGCAAACTGTCACTAA+TGG | - | chr1.4:68687486-68687505 | MS.gene21049:intron | 35.0% | |
| AAGAAAGGAATGTGATGAGA+GGG | - | chr1.4:68687242-68687261 | MS.gene21049:intron | 35.0% | |
| AAGAAGAGCAGAGCTAATTA+AGG | - | chr1.4:68686196-68686215 | MS.gene21049:intron | 35.0% | |
| AAGACAAAGGAAAGAAAGGA+AGG | - | chr1.4:68687770-68687789 | MS.gene21049:intron | 35.0% | |
| AATTAACAGTTTACTCGTCG+TGG | - | chr1.4:68686491-68686510 | MS.gene21049:intron | 35.0% | |
| ACATATATTTGACGGTCTTG+AGG | - | chr1.4:68687287-68687306 | MS.gene21049:intron | 35.0% | |
| ACATGATGTTGAAACCATGT+TGG | + | chr1.4:68684056-68684075 | None:intergenic | 35.0% | |
| ACCAAAATAGCAATGGAAAG+AGG | + | chr1.4:68686592-68686611 | None:intergenic | 35.0% | |
| ACCAACTATAAGCACGAAAA+TGG | + | chr1.4:68685553-68685572 | None:intergenic | 35.0% | |
| ACTAGGGATTAGGGTAAATT+AGG | - | chr1.4:68684701-68684720 | MS.gene21049:intron | 35.0% | |
| AGAGAGAAATGCTCAATTAG+CGG | + | chr1.4:68682446-68682465 | None:intergenic | 35.0% | |
| AGATGAAAAGTGAGATTGGT+TGG | - | chr1.4:68683487-68683506 | MS.gene21049:intron | 35.0% | |
| AGATTAGCAATTAGTGCAAG+GGG | - | chr1.4:68684828-68684847 | MS.gene21049:intron | 35.0% | |
| AGGGAAAAATACTAGGGATT+AGG | - | chr1.4:68684691-68684710 | MS.gene21049:intron | 35.0% | |
| AGGGTAAATTAGGGTGAATT+AGG | - | chr1.4:68684711-68684730 | MS.gene21049:intron | 35.0% | |
| ATGTAAACTGCAAACAAAGG+AGG | - | chr1.4:68684114-68684133 | MS.gene21049:CDS | 35.0% | |
| CAAAGGTCATGATAAATGCT+TGG | - | chr1.4:68684254-68684273 | MS.gene21049:intron | 35.0% | |
| CACCTTAGGCAATAAGAATT+TGG | - | chr1.4:68683141-68683160 | MS.gene21049:intron | 35.0% | |
| CAGACAATGTTGATCGTAAT+TGG | - | chr1.4:68683916-68683935 | MS.gene21049:intron | 35.0% | |
| CATGGTAAACGACATTTGAT+AGG | - | chr1.4:68682943-68682962 | MS.gene21049:intron | 35.0% | |
| CATTAAATGATAGCAAGGGA+GGG | - | chr1.4:68684386-68684405 | MS.gene21049:intron | 35.0% | |
| CCATTATTAGTAACTCGAAC+CGG | + | chr1.4:68687867-68687886 | None:intergenic | 35.0% | |
| CCGTCAAACAAAATTGAGAT+TGG | + | chr1.4:68683882-68683901 | None:intergenic | 35.0% | |
| CCTTTCTTAGAAACTTCAGA+AGG | + | chr1.4:68687230-68687249 | None:intergenic | 35.0% | |
| CTAGGGATTAGGGTAAATTA+GGG | - | chr1.4:68684702-68684721 | MS.gene21049:intron | 35.0% | |
| CTGATGTGTTGTCTTCTTTA+TGG | - | chr1.4:68687070-68687089 | MS.gene21049:intron | 35.0% | |
| CTTGCTTATCAAATTCAGGA+AGG | + | chr1.4:68687803-68687822 | None:intergenic | 35.0% | |
| GACCAAATTCTTATTGCCTA+AGG | + | chr1.4:68683146-68683165 | None:intergenic | 35.0% | |
| GAGATGAAGATAGAAGACAA+AGG | - | chr1.4:68687757-68687776 | MS.gene21049:intron | 35.0% | |
| GATATTAGGAGGGAAACATA+TGG | - | chr1.4:68682629-68682648 | MS.gene21049:intron | 35.0% | |
| GATCGCATTAAATGATAGCA+AGG | - | chr1.4:68684381-68684400 | MS.gene21049:intron | 35.0% | |
| GCAACTTTATTCAATGTTGC+TGG | + | chr1.4:68683798-68683817 | None:intergenic | 35.0% | |
| GCTTATTCTGCATGTTCATT+CGG | + | chr1.4:68683991-68684010 | None:intergenic | 35.0% | |
| GGGAAAAATACTAGGGATTA+GGG | - | chr1.4:68684692-68684711 | MS.gene21049:intron | 35.0% | |
| GGGTAAATTAGGGTGAATTA+GGG | - | chr1.4:68684712-68684731 | MS.gene21049:intron | 35.0% | |
| GTACATAGAGGATGATGATT+GGG | - | chr1.4:68684195-68684214 | MS.gene21049:intron | 35.0% | |
| GTGTGAAAATACGGTTTGAA+CGG | - | chr1.4:68684950-68684969 | MS.gene21049:intron | 35.0% | |
| GTTCTTCCAACACTTATCAA+TGG | + | chr1.4:68683299-68683318 | None:intergenic | 35.0% | |
| GTTTAGGAGGGAAAAATACT+AGG | - | chr1.4:68684684-68684703 | MS.gene21049:intron | 35.0% | |
| TAAGAAAGGAATGTGATGAG+AGG | - | chr1.4:68687241-68687260 | MS.gene21049:intron | 35.0% | |
| TATCAGGTTTATGTTGCTCA+TGG | - | chr1.4:68687424-68687443 | MS.gene21049:intron | 35.0% | |
| TCGAGTTACTAATAATGGCT+GGG | - | chr1.4:68687869-68687888 | MS.gene21049:CDS | 35.0% | |
| TCTCATTCTATGTCAGAGAA+AGG | + | chr1.4:68685501-68685520 | None:intergenic | 35.0% | |
| TCTGCCGAGAAAATGATATT+TGG | - | chr1.4:68686152-68686171 | MS.gene21049:intron | 35.0% | |
| TCTTTGATCTCAACCGTAAT+TGG | + | chr1.4:68682371-68682390 | None:intergenic | 35.0% | |
| TGTAAACTGCAAACAAAGGA+GGG | - | chr1.4:68684115-68684134 | MS.gene21049:CDS | 35.0% | |
| TGTACATAGAGGATGATGAT+TGG | - | chr1.4:68684194-68684213 | MS.gene21049:intron | 35.0% | |
| TGTGAAAATACGGTTTGAAC+GGG | - | chr1.4:68684951-68684970 | MS.gene21049:intron | 35.0% | |
| TTGACAGCGTCACAATTAAT+AGG | + | chr1.4:68683059-68683078 | None:intergenic | 35.0% | |
| TTGATCGTAATTGGATCCAA+TGG | - | chr1.4:68683925-68683944 | MS.gene21049:intron | 35.0% | |
| TTGGGTGTTTAATGGTTAGT+TGG | - | chr1.4:68684273-68684292 | MS.gene21049:intron | 35.0% | |
| ! | AGATTGCATAAAGTATCCGA+TGG | - | chr1.4:68686982-68687001 | MS.gene21049:intron | 35.0% |
| ! | CGAGAAAATGATATTTGGTG+TGG | - | chr1.4:68686157-68686176 | MS.gene21049:intron | 35.0% |
| ! | TCTGGTGATCTTTGTTATCT+TGG | - | chr1.4:68682714-68682733 | MS.gene21049:intron | 35.0% |
| ! | TGGGTGTTTAATGGTTAGTT+GGG | - | chr1.4:68684274-68684293 | MS.gene21049:intron | 35.0% |
| ! | TTCGAGTTACTAATAATGGC+TGG | - | chr1.4:68687868-68687887 | MS.gene21049:CDS | 35.0% |
| !! | AAAATGATATTTGGTGTGGC+TGG | - | chr1.4:68686161-68686180 | MS.gene21049:intron | 35.0% |
| !! | AAATGATATTTGGTGTGGCT+GGG | - | chr1.4:68686162-68686181 | MS.gene21049:intron | 35.0% |
| !! | AAGAGCATTGAAATGACAGA+AGG | + | chr1.4:68687403-68687422 | None:intergenic | 35.0% |
| !! | CCTTCTGAAGTTTCTAAGAA+AGG | - | chr1.4:68687227-68687246 | MS.gene21049:intron | 35.0% |
| !! | CTTTGAAGTTCCAATACAGA+TGG | - | chr1.4:68686124-68686143 | MS.gene21049:intron | 35.0% |
| !! | TCATGTTTTTACAGCTCCAT+TGG | + | chr1.4:68683944-68683963 | None:intergenic | 35.0% |
| !!! | TCCTCTTTCCATTGCTATTT+TGG | - | chr1.4:68686588-68686607 | MS.gene21049:intron | 35.0% |
| AAAATTGCTTCAAGCTCGTG+AGG | + | chr1.4:68685828-68685847 | None:intergenic | 40.0% | |
| ACATCATGTTCAGCCATTAG+AGG | - | chr1.4:68684067-68684086 | MS.gene21049:intron | 40.0% | |
| ACGCACGTGTATATATAGAG+TGG | - | chr1.4:68684143-68684162 | MS.gene21049:CDS | 40.0% | |
| AGAAAGGAATGTGATGAGAG+GGG | - | chr1.4:68687243-68687262 | MS.gene21049:intron | 40.0% | |
| AGGGAAAAATGCTAGGGATT+AGG | - | chr1.4:68685312-68685331 | MS.gene21049:intron | 40.0% | |
| AGGTTTATGTTGCTCATGGA+AGG | - | chr1.4:68687428-68687447 | MS.gene21049:intron | 40.0% | |
| ATATGAGCTGTACATGCATG+TGG | - | chr1.4:68686639-68686658 | MS.gene21049:intron | 40.0% | |
| ATTAGGAGGGAAACATATGG+TGG | - | chr1.4:68682632-68682651 | MS.gene21049:intron | 40.0% | |
| CACTCTTCTTCTTTGACCAT+CGG | + | chr1.4:68687001-68687020 | None:intergenic | 40.0% | |
| CATTCTATGTCAGAGAAAGG+AGG | + | chr1.4:68685498-68685517 | None:intergenic | 40.0% | |
| GAAATGCTCAATTAGCGGTT+TGG | + | chr1.4:68682441-68682460 | None:intergenic | 40.0% | |
| GAACAGTAGAAGTTTGGCTA+CGG | - | chr1.4:68687727-68687746 | MS.gene21049:intron | 40.0% | |
| GAGCTGAAATTCACTTATCC+TGG | - | chr1.4:68682389-68682408 | MS.gene21049:CDS | 40.0% | |
| GATCAACATTGTCTGTGTGA+AGG | + | chr1.4:68683911-68683930 | None:intergenic | 40.0% | |
| GCAGAAATGTCCATCTGTAT+TGG | + | chr1.4:68686137-68686156 | None:intergenic | 40.0% | |
| GCATTAAATGATAGCAAGGG+AGG | - | chr1.4:68684385-68684404 | MS.gene21049:intron | 40.0% | |
| GGGAAAAATGCTAGGGATTA+GGG | - | chr1.4:68685313-68685332 | MS.gene21049:intron | 40.0% | |
| GTAAACGTAAGAGTCACCTT+AGG | - | chr1.4:68683127-68683146 | MS.gene21049:intron | 40.0% | |
| GTCATGCCTTAAATGGTTTG+AGG | + | chr1.4:68687041-68687060 | None:intergenic | 40.0% | |
| GTTGTTTACTCCACAACCAT+AGG | + | chr1.4:68687619-68687638 | None:intergenic | 40.0% | |
| TATTTGACGGTCTTGAGGAT+TGG | - | chr1.4:68687292-68687311 | MS.gene21049:intron | 40.0% | |
| TCTAAGTGGTGCATCTGATA+TGG | + | chr1.4:68682994-68683013 | None:intergenic | 40.0% | |
| TGCAGAGAACAGTAGAAGTT+TGG | - | chr1.4:68687721-68687740 | MS.gene21049:intron | 40.0% | |
| TGGAAAGAGGAAGATAGCTT+AGG | + | chr1.4:68686579-68686598 | None:intergenic | 40.0% | |
| TTAAGGTTAGAAGCTGTGCA+CGG | - | chr1.4:68686213-68686232 | MS.gene21049:intron | 40.0% | |
| TTCACTTACAATGCATGGCT+AGG | - | chr1.4:68686848-68686867 | MS.gene21049:intron | 40.0% | |
| TTCACTTATCCTGGAATCGA+CGG | - | chr1.4:68682398-68682417 | MS.gene21049:CDS | 40.0% | |
| TTCTCTCTCAATCTCTTCTC+CGG | - | chr1.4:68682458-68682477 | MS.gene21049:CDS | 40.0% | |
| ! | ACATATGGTGGAACCTGAAA+TGG | - | chr1.4:68682644-68682663 | MS.gene21049:intron | 40.0% |
| ! | AGGGAAAACTTGGAGTGTTT+AGG | - | chr1.4:68684405-68684424 | MS.gene21049:intron | 40.0% |
| ! | CCGGTTCGAGTTACTAATAA+TGG | - | chr1.4:68687864-68687883 | MS.gene21049:CDS | 40.0% |
| ! | GGGAAAACTTGGAGTGTTTA+GGG | - | chr1.4:68684406-68684425 | MS.gene21049:intron | 40.0% |
| ! | GGTGATCTTTGTTATCTTGG+TGG | - | chr1.4:68682717-68682736 | MS.gene21049:intron | 40.0% |
| ! | TAAGCTCAAACCGAGTTTTG+AGG | - | chr1.4:68687940-68687959 | MS.gene21049:CDS | 40.0% |
| ! | TAGGAGGAAGTTTTCTTCAC+CGG | + | chr1.4:68687922-68687941 | None:intergenic | 40.0% |
| ! | TCAAAACTCGGTTTGAGCTT+AGG | + | chr1.4:68687941-68687960 | None:intergenic | 40.0% |
| ! | TTCATCGCACGGGTTAAATA+GGG | + | chr1.4:68682787-68682806 | None:intergenic | 40.0% |
| ! | TTTCATCGCACGGGTTAAAT+AGG | + | chr1.4:68682788-68682807 | None:intergenic | 40.0% |
| !! | AAGCTCAAACCGAGTTTTGA+GGG | - | chr1.4:68687941-68687960 | MS.gene21049:CDS | 40.0% |
| !! | AGGGCATAAGTGCATTGATT+AGG | + | chr1.4:68682768-68682787 | None:intergenic | 40.0% |
| !! | GCCATTTTCGTGCTTATAGT+TGG | - | chr1.4:68685549-68685568 | MS.gene21049:intron | 40.0% |
| !! | GGGCATAAGTGCATTGATTA+GGG | + | chr1.4:68682767-68682786 | None:intergenic | 40.0% |
| !! | TCTTTGTTATCTTGGTGGTG+AGG | - | chr1.4:68682722-68682741 | MS.gene21049:intron | 40.0% |
| !!! | AGAAGAGATGTTGCTTTTGC+TGG | - | chr1.4:68686101-68686120 | MS.gene21049:intron | 40.0% |
| ACGAGGTTACTGGTGATTGT+AGG | - | chr1.4:68686295-68686314 | MS.gene21049:intron | 45.0% | |
| AGAGAAATTACCAGCGCCAT+TGG | + | chr1.4:68682507-68682526 | None:intergenic | 45.0% | |
| AGGGCAAAGTAGGGTGAATT+AGG | - | chr1.4:68685332-68685351 | MS.gene21049:intron | 45.0% | |
| AGGGTGAATTAGGGCAAACA+TGG | - | chr1.4:68684721-68684740 | MS.gene21049:intron | 45.0% | |
| AGGTTGCTCATTCCTTTCCT+AGG | - | chr1.4:68687152-68687171 | MS.gene21049:intron | 45.0% | |
| AGTAGAAGTTTGGCTACGGA+AGG | - | chr1.4:68687731-68687750 | MS.gene21049:intron | 45.0% | |
| ATAGCAAGGGAGGGAAAACT+TGG | - | chr1.4:68684395-68684414 | MS.gene21049:intron | 45.0% | |
| CAAGGAATGCAACACCAACA+TGG | - | chr1.4:68684039-68684058 | MS.gene21049:intron | 45.0% | |
| CAGCTCTTGCTAGAACATCA+AGG | + | chr1.4:68687206-68687225 | None:intergenic | 45.0% | |
| CCAAGAACACGAACCATTTC+AGG | + | chr1.4:68682660-68682679 | None:intergenic | 45.0% | |
| CCAGAAGAAGAACCTAGGAA+AGG | + | chr1.4:68687167-68687186 | None:intergenic | 45.0% | |
| CCTGAAATGGTTCGTGTTCT+TGG | - | chr1.4:68682657-68682676 | MS.gene21049:intron | 45.0% | |
| CCTTTCCTAGGTTCTTCTTC+TGG | - | chr1.4:68687164-68687183 | MS.gene21049:intron | 45.0% | |
| CTAGGGATTAGGGCAAAGTA+GGG | - | chr1.4:68685323-68685342 | MS.gene21049:intron | 45.0% | |
| CTCATCCAGAAGAAGAACCT+AGG | + | chr1.4:68687172-68687191 | None:intergenic | 45.0% | |
| GGGCAAAGTAGGGTGAATTA+GGG | - | chr1.4:68685333-68685352 | MS.gene21049:intron | 45.0% | |
| GGGTCTCCTCAAACCATTTA+AGG | - | chr1.4:68687032-68687051 | MS.gene21049:intron | 45.0% | |
| GTTCTGATGTTCAACTTGGC+AGG | - | chr1.4:68686936-68686955 | MS.gene21049:intron | 45.0% | |
| TCAATCTCTTCTCCGGTGAT+CGG | - | chr1.4:68682465-68682484 | MS.gene21049:CDS | 45.0% | |
| TGATATGATCGTCAGCCGTT+TGG | - | chr1.4:68685584-68685603 | MS.gene21049:intron | 45.0% | |
| TTATGTTGCTCATGGAAGGC+TGG | - | chr1.4:68687432-68687451 | MS.gene21049:intron | 45.0% | |
| TTCATGTCAGACGAGGTTAC+TGG | - | chr1.4:68686285-68686304 | MS.gene21049:intron | 45.0% | |
| ! | AAACTCGGTTTGAGCTTAGG+AGG | + | chr1.4:68687938-68687957 | None:intergenic | 45.0% |
| ! | AAATGCTAGCTTGACCCGTA+GGG | - | chr1.4:68684431-68684450 | MS.gene21049:intron | 45.0% |
| ! | AGATCTGGGCTTGTTTGGAT+TGG | + | chr1.4:68685801-68685820 | None:intergenic | 45.0% |
| ! | GAAACAGATCTGGGCTTGTT+TGG | + | chr1.4:68685806-68685825 | None:intergenic | 45.0% |
| ! | GAAGTTTTCTTCACCGGCAA+TGG | + | chr1.4:68687916-68687935 | None:intergenic | 45.0% |
| ! | TAAATGCTAGCTTGACCCGT+AGG | - | chr1.4:68684430-68684449 | MS.gene21049:intron | 45.0% |
| ! | TCAATTAGCGGTTTGGAACC+CGG | + | chr1.4:68682434-68682453 | None:intergenic | 45.0% |
| !! | AGGTTCTGAAAAGGGTACAC+AGG | - | chr1.4:68686868-68686887 | MS.gene21049:intron | 45.0% |
| !! | ATTAGCTCTGCTCTTCTTGC+AGG | + | chr1.4:68686194-68686213 | None:intergenic | 45.0% |
| !! | GCATGGCTAGGTTCTGAAAA+GGG | - | chr1.4:68686860-68686879 | MS.gene21049:intron | 45.0% |
| !! | TGCATGGCTAGGTTCTGAAA+AGG | - | chr1.4:68686859-68686878 | MS.gene21049:intron | 45.0% |
| !! | TGTTATCTTGGTGGTGAGGT+TGG | - | chr1.4:68682726-68682745 | MS.gene21049:intron | 45.0% |
| !!! | AGCTCAAACCGAGTTTTGAG+GGG | - | chr1.4:68687942-68687961 | MS.gene21049:CDS | 45.0% |
| !!! | TTTTTTAATTAAGATAATAA+GGG | + | chr1.4:68685887-68685906 | None:intergenic | 5.0% |
| !!! | TTTTTTTAATTAAGATAATA+AGG | + | chr1.4:68685888-68685907 | None:intergenic | 5.0% |
| AGCTCGTGAGGAAACAGATC+TGG | + | chr1.4:68685816-68685835 | None:intergenic | 50.0% | |
| AGGAAAGAAAGGAAGGCTGC+TGG | - | chr1.4:68687777-68687796 | MS.gene21049:intron | 50.0% | |
| ATCCCATAACAACCCCCTAC+GGG | + | chr1.4:68684448-68684467 | None:intergenic | 50.0% | |
| ATGGAAGCCGTGTAGTTGGA+GGG | - | chr1.4:68687826-68687845 | MS.gene21049:CDS | 50.0% | |
| CGGTTACATTCCACCATTGC+CGG | - | chr1.4:68687900-68687919 | MS.gene21049:CDS | 50.0% | |
| GATCCCATAACAACCCCCTA+CGG | + | chr1.4:68684449-68684468 | None:intergenic | 50.0% | |
| GCTAGGGATTAGGGCAAAGT+AGG | - | chr1.4:68685322-68685341 | MS.gene21049:intron | 50.0% | |
| GCTCGTGAGGAAACAGATCT+GGG | + | chr1.4:68685815-68685834 | None:intergenic | 50.0% | |
| GGGGGTTGTTATGGGATCTA+CGG | - | chr1.4:68684451-68684470 | MS.gene21049:intron | 50.0% | |
| GTATTCAAGGTTACCCGTCG+AGG | + | chr1.4:68687580-68687599 | None:intergenic | 50.0% | |
| TAATTATGCGCGCTCCTCGA+CGG | - | chr1.4:68687563-68687582 | MS.gene21049:CDS | 50.0% | |
| TGCCTTCTCGTTGGATCCAA+TGG | - | chr1.4:68682488-68682507 | MS.gene21049:CDS | 50.0% | |
| ! | AATGCTAGCTTGACCCGTAG+GGG | - | chr1.4:68684432-68684451 | MS.gene21049:intron | 50.0% |
| ! | GTTGATGGAAGCCGTGTAGT+TGG | - | chr1.4:68687822-68687841 | MS.gene21049:CDS | 50.0% |
| ! | GTTTTCTTCACCGGCAATGG+TGG | + | chr1.4:68687913-68687932 | None:intergenic | 50.0% |
| !!! | GCTCAAACCGAGTTTTGAGG+GGG | - | chr1.4:68687943-68687962 | MS.gene21049:CDS | 50.0% |
| !!! | TTTTTTGGGATGGGGCACAG+TGG | - | chr1.4:68686078-68686097 | MS.gene21049:intron | 50.0% |
| AATTATGCGCGCTCCTCGAC+GGG | - | chr1.4:68687564-68687583 | MS.gene21049:CDS | 55.0% | |
| ACTAATAATGGCTGGGCCGC+AGG | - | chr1.4:68687876-68687895 | MS.gene21049:CDS | 55.0% | |
| ATCTACGGCTGAGACGTAGG+GGG | - | chr1.4:68684466-68684485 | MS.gene21049:intron | 55.0% | |
| CAGGATCCCCTCCAACTACA+CGG | + | chr1.4:68687836-68687855 | None:intergenic | 55.0% | |
| CGCCATTGGATCCAACGAGA+AGG | + | chr1.4:68682493-68682512 | None:intergenic | 55.0% | |
| GACCCGTAGGGGGTTGTTAT+GGG | - | chr1.4:68684443-68684462 | MS.gene21049:intron | 55.0% | |
| GATCTACGGCTGAGACGTAG+GGG | - | chr1.4:68684465-68684484 | MS.gene21049:intron | 55.0% | |
| GATGGAAGCCGTGTAGTTGG+AGG | - | chr1.4:68687825-68687844 | MS.gene21049:CDS | 55.0% | |
| GGATCTACGGCTGAGACGTA+GGG | - | chr1.4:68684464-68684483 | MS.gene21049:intron | 55.0% | |
| GGTGGAATGTAACCGACCTG+CGG | + | chr1.4:68687895-68687914 | None:intergenic | 55.0% | |
| TGACCCGTAGGGGGTTGTTA+TGG | - | chr1.4:68684442-68684461 | MS.gene21049:intron | 55.0% | |
| TGGAAGCCGTGTAGTTGGAG+GGG | - | chr1.4:68687827-68687846 | MS.gene21049:CDS | 55.0% | |
| ! | ATGCTAGCTTGACCCGTAGG+GGG | - | chr1.4:68684433-68684452 | MS.gene21049:intron | 55.0% |
| ! | ATTAGCGGTTTGGAACCCGG+CGG | + | chr1.4:68682431-68682450 | None:intergenic | 55.0% |
| !! | AACGAGAAGGCACCGATCAC+CGG | + | chr1.4:68682480-68682499 | None:intergenic | 55.0% |
| AATCGACGGTCATCCTCCGC+CGG | - | chr1.4:68682412-68682431 | MS.gene21049:CDS | 60.0% | |
| ATAATGGCTGGGCCGCAGGT+CGG | - | chr1.4:68687880-68687899 | MS.gene21049:CDS | 60.0% | |
| CTCGTTGGATCCAATGGCGC+TGG | - | chr1.4:68682494-68682513 | MS.gene21049:CDS | 60.0% | |
| GGGATCTACGGCTGAGACGT+AGG | - | chr1.4:68684463-68684482 | MS.gene21049:intron | 60.0% | |
| ! | GGTGATCGGTGCCTTCTCGT+TGG | - | chr1.4:68682479-68682498 | MS.gene21049:CDS | 60.0% |
| !! | GGAGGATGACCGTCGATTCC+AGG | + | chr1.4:68682410-68682429 | None:intergenic | 60.0% |
| ACTCGAACCGGAGCTCGTGC+AGG | + | chr1.4:68687855-68687874 | None:intergenic | 65.0% | |
| AGGGGATCCTGCACGAGCTC+CGG | - | chr1.4:68687845-68687864 | MS.gene21049:CDS | 65.0% | |
| ATCGACGGTCATCCTCCGCC+GGG | - | chr1.4:68682413-68682432 | MS.gene21049:CDS | 65.0% | |
| ! | AGCGGTTTGGAACCCGGCGG+AGG | + | chr1.4:68682428-68682447 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 68682338 | 68687968 | 68682338 | ID=MS.gene21049 |
| chr1.4 | mRNA | 68682338 | 68687968 | 68682338 | ID=MS.gene21049.t1;Parent=MS.gene21049 |
| chr1.4 | exon | 68687791 | 68687968 | 68687791 | ID=MS.gene21049.t1.exon1;Parent=MS.gene21049.t1 |
| chr1.4 | CDS | 68687791 | 68687968 | 68687791 | ID=cds.MS.gene21049.t1;Parent=MS.gene21049.t1 |
| chr1.4 | exon | 68687563 | 68687696 | 68687563 | ID=MS.gene21049.t1.exon2;Parent=MS.gene21049.t1 |
| chr1.4 | CDS | 68687563 | 68687696 | 68687563 | ID=cds.MS.gene21049.t1;Parent=MS.gene21049.t1 |
| chr1.4 | exon | 68684089 | 68684208 | 68684089 | ID=MS.gene21049.t1.exon3;Parent=MS.gene21049.t1 |
| chr1.4 | CDS | 68684089 | 68684208 | 68684089 | ID=cds.MS.gene21049.t1;Parent=MS.gene21049.t1 |
| chr1.4 | exon | 68683253 | 68683348 | 68683253 | ID=MS.gene21049.t1.exon4;Parent=MS.gene21049.t1 |
| chr1.4 | CDS | 68683253 | 68683348 | 68683253 | ID=cds.MS.gene21049.t1;Parent=MS.gene21049.t1 |
| chr1.4 | exon | 68682980 | 68683132 | 68682980 | ID=MS.gene21049.t1.exon5;Parent=MS.gene21049.t1 |
| chr1.4 | CDS | 68682980 | 68683132 | 68682980 | ID=cds.MS.gene21049.t1;Parent=MS.gene21049.t1 |
| chr1.4 | exon | 68682799 | 68682876 | 68682799 | ID=MS.gene21049.t1.exon6;Parent=MS.gene21049.t1 |
| chr1.4 | CDS | 68682799 | 68682876 | 68682799 | ID=cds.MS.gene21049.t1;Parent=MS.gene21049.t1 |
| chr1.4 | exon | 68682338 | 68682580 | 68682338 | ID=MS.gene21049.t1.exon7;Parent=MS.gene21049.t1 |
| chr1.4 | CDS | 68682338 | 68682580 | 68682338 | ID=cds.MS.gene21049.t1;Parent=MS.gene21049.t1 |
| Gene Sequence |
| Protein sequence |
