Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21112.t1 | XP_013469117.1 | 95.4 | 219 | 10 | 0 | 1 | 219 | 1 | 219 | 4.10E-112 | 414.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21112.t1 | Q9M263 | 71.1 | 211 | 60 | 1 | 9 | 218 | 9 | 219 | 7.2e-81 | 301.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21112.t1 | A0A072VYK0 | 95.4 | 219 | 10 | 0 | 1 | 219 | 1 | 219 | 3.0e-112 | 414.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049302 | MS.gene21112 | 0.801833 | 7.47E-49 | -1.69E-46 |
| MS.gene050649 | MS.gene21112 | 0.815861 | 7.44E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21112.t1 | MTR_1g085500 | 95.434 | 219 | 10 | 0 | 1 | 219 | 1 | 219 | 8.34e-153 | 423 |
| MS.gene21112.t1 | MTR_1g085140 | 71.000 | 200 | 58 | 0 | 19 | 218 | 20 | 219 | 3.74e-100 | 290 |
| MS.gene21112.t1 | MTR_7g111240 | 69.388 | 196 | 60 | 0 | 22 | 217 | 19 | 214 | 1.49e-94 | 275 |
| MS.gene21112.t1 | MTR_7g111240 | 69.388 | 196 | 57 | 1 | 22 | 217 | 19 | 211 | 1.82e-92 | 270 |
| MS.gene21112.t1 | MTR_1g079490 | 46.479 | 213 | 108 | 3 | 6 | 213 | 5 | 216 | 4.79e-60 | 188 |
| MS.gene21112.t1 | MTR_2g019250 | 47.596 | 208 | 102 | 3 | 11 | 213 | 10 | 215 | 6.65e-60 | 187 |
| MS.gene21112.t1 | MTR_4g017040 | 47.115 | 208 | 103 | 3 | 11 | 213 | 10 | 215 | 9.11e-60 | 187 |
| MS.gene21112.t1 | MTR_4g017050 | 47.115 | 208 | 103 | 3 | 11 | 213 | 10 | 215 | 1.02e-59 | 187 |
| MS.gene21112.t1 | MTR_5g046410 | 47.115 | 208 | 103 | 3 | 11 | 213 | 10 | 215 | 1.15e-59 | 187 |
| MS.gene21112.t1 | MTR_5g046430 | 47.115 | 208 | 103 | 3 | 11 | 213 | 10 | 215 | 1.15e-59 | 187 |
| MS.gene21112.t1 | MTR_4g017030 | 47.115 | 208 | 103 | 3 | 11 | 213 | 10 | 215 | 1.15e-59 | 187 |
| MS.gene21112.t1 | MTR_6g005330 | 47.393 | 211 | 104 | 4 | 8 | 213 | 6 | 214 | 6.42e-58 | 182 |
| MS.gene21112.t1 | MTR_6g005340 | 48.259 | 201 | 98 | 3 | 17 | 213 | 16 | 214 | 1.71e-57 | 181 |
| MS.gene21112.t1 | MTR_6g005360 | 48.259 | 201 | 98 | 3 | 17 | 213 | 16 | 214 | 2.72e-57 | 181 |
| MS.gene21112.t1 | MTR_6g005310 | 48.259 | 201 | 98 | 3 | 17 | 213 | 16 | 214 | 4.59e-57 | 180 |
| MS.gene21112.t1 | MTR_6g005380 | 49.010 | 202 | 95 | 4 | 8 | 203 | 6 | 205 | 4.31e-56 | 177 |
| MS.gene21112.t1 | MTR_1g023770 | 43.415 | 205 | 108 | 2 | 11 | 213 | 10 | 208 | 5.25e-56 | 177 |
| MS.gene21112.t1 | MTR_2g030855 | 45.408 | 196 | 102 | 2 | 20 | 213 | 19 | 211 | 1.69e-55 | 176 |
| MS.gene21112.t1 | MTR_1g112200 | 42.381 | 210 | 114 | 3 | 7 | 216 | 7 | 209 | 2.33e-54 | 173 |
| MS.gene21112.t1 | MTR_2g031270 | 43.719 | 199 | 106 | 3 | 18 | 213 | 17 | 212 | 6.13e-52 | 167 |
| MS.gene21112.t1 | MTR_6g005350 | 43.128 | 211 | 112 | 5 | 8 | 213 | 6 | 213 | 4.12e-51 | 165 |
| MS.gene21112.t1 | MTR_5g036570 | 43.590 | 195 | 109 | 1 | 22 | 215 | 26 | 220 | 1.31e-49 | 161 |
| MS.gene21112.t1 | MTR_1g060120 | 38.009 | 221 | 126 | 5 | 6 | 218 | 8 | 225 | 1.77e-48 | 159 |
| MS.gene21112.t1 | MTR_2g030895 | 44.444 | 171 | 92 | 2 | 46 | 213 | 7 | 177 | 7.40e-46 | 150 |
| MS.gene21112.t1 | MTR_2g030865 | 44.444 | 171 | 92 | 2 | 46 | 213 | 7 | 177 | 3.89e-45 | 148 |
| MS.gene21112.t1 | MTR_8g007300 | 43.243 | 185 | 101 | 3 | 6 | 188 | 10 | 192 | 1.03e-40 | 138 |
| MS.gene21112.t1 | MTR_8g020590 | 38.378 | 185 | 110 | 1 | 8 | 192 | 4 | 184 | 2.76e-38 | 132 |
| MS.gene21112.t1 | MTR_2g086640 | 39.899 | 198 | 95 | 6 | 19 | 211 | 22 | 200 | 4.35e-38 | 131 |
| MS.gene21112.t1 | MTR_2g086620 | 39.899 | 198 | 95 | 6 | 19 | 211 | 23 | 201 | 4.83e-38 | 131 |
| MS.gene21112.t1 | MTR_2g086630 | 39.899 | 198 | 95 | 6 | 19 | 211 | 23 | 201 | 6.74e-38 | 130 |
| MS.gene21112.t1 | MTR_8g020650 | 35.417 | 192 | 120 | 3 | 26 | 217 | 21 | 208 | 2.72e-36 | 127 |
| MS.gene21112.t1 | MTR_8g020630 | 34.673 | 199 | 126 | 3 | 19 | 217 | 14 | 208 | 3.20e-36 | 127 |
| MS.gene21112.t1 | MTR_2g031300 | 41.250 | 160 | 72 | 2 | 46 | 203 | 7 | 146 | 1.68e-35 | 123 |
| MS.gene21112.t1 | MTR_3g096330 | 38.350 | 206 | 121 | 4 | 9 | 210 | 561 | 764 | 2.39e-35 | 132 |
| MS.gene21112.t1 | MTR_2g036120 | 37.306 | 193 | 117 | 3 | 26 | 218 | 21 | 209 | 4.08e-35 | 124 |
| MS.gene21112.t1 | MTR_3g019650 | 36.842 | 190 | 116 | 3 | 26 | 215 | 20 | 205 | 8.53e-35 | 123 |
| MS.gene21112.t1 | MTR_4g052770 | 43.284 | 134 | 73 | 2 | 79 | 211 | 71 | 202 | 1.32e-34 | 122 |
| MS.gene21112.t1 | MTR_2g045100 | 37.019 | 208 | 127 | 3 | 8 | 215 | 3 | 206 | 1.48e-34 | 122 |
| MS.gene21112.t1 | MTR_4g010340 | 39.423 | 208 | 108 | 8 | 9 | 213 | 8 | 200 | 1.60e-34 | 122 |
| MS.gene21112.t1 | MTR_4g052780 | 43.284 | 134 | 73 | 2 | 79 | 211 | 71 | 202 | 1.92e-34 | 122 |
| MS.gene21112.t1 | MTR_8g020670 | 32.381 | 210 | 134 | 4 | 8 | 217 | 7 | 208 | 5.61e-34 | 120 |
| MS.gene21112.t1 | MTR_3g019680 | 36.842 | 190 | 116 | 3 | 26 | 215 | 20 | 205 | 8.67e-34 | 120 |
| MS.gene21112.t1 | MTR_5g031460 | 33.175 | 211 | 131 | 4 | 8 | 215 | 3 | 206 | 1.06e-33 | 120 |
| MS.gene21112.t1 | MTR_3g019710 | 36.000 | 200 | 118 | 4 | 19 | 215 | 14 | 206 | 1.31e-33 | 120 |
| MS.gene21112.t1 | MTR_2g041550 | 37.097 | 186 | 109 | 3 | 29 | 211 | 23 | 203 | 2.70e-33 | 119 |
| MS.gene21112.t1 | MTR_2g041570 | 34.783 | 207 | 128 | 3 | 6 | 212 | 5 | 204 | 8.13e-33 | 118 |
| MS.gene21112.t1 | MTR_2g041580 | 34.951 | 206 | 127 | 3 | 6 | 211 | 5 | 203 | 1.24e-32 | 117 |
| MS.gene21112.t1 | MTR_2g044040 | 34.615 | 208 | 128 | 4 | 8 | 215 | 7 | 206 | 2.66e-32 | 116 |
| MS.gene21112.t1 | MTR_0284s0010 | 35.025 | 197 | 124 | 3 | 19 | 215 | 14 | 206 | 4.89e-31 | 113 |
| MS.gene21112.t1 | MTR_8g020770 | 41.420 | 169 | 90 | 4 | 8 | 173 | 7 | 169 | 1.92e-30 | 112 |
| MS.gene21112.t1 | MTR_7g011340 | 35.979 | 189 | 117 | 4 | 27 | 215 | 22 | 206 | 7.37e-30 | 110 |
| MS.gene21112.t1 | MTR_8g020750 | 36.275 | 204 | 121 | 4 | 9 | 211 | 10 | 205 | 1.41e-29 | 109 |
| MS.gene21112.t1 | MTR_8g020763 | 36.047 | 172 | 107 | 3 | 42 | 213 | 17 | 185 | 6.74e-29 | 107 |
| MS.gene21112.t1 | MTR_8g020610 | 32.039 | 206 | 132 | 3 | 6 | 211 | 3 | 200 | 7.02e-28 | 105 |
| MS.gene21112.t1 | MTR_2g019780 | 32.227 | 211 | 134 | 6 | 5 | 213 | 4 | 207 | 2.20e-27 | 103 |
| MS.gene21112.t1 | MTR_8g020760 | 34.343 | 198 | 120 | 6 | 19 | 213 | 16 | 206 | 3.05e-26 | 100 |
| MS.gene21112.t1 | MTR_3g073170 | 33.155 | 187 | 117 | 5 | 28 | 213 | 26 | 205 | 8.48e-25 | 97.4 |
| MS.gene21112.t1 | MTR_3g019810 | 33.171 | 205 | 125 | 6 | 8 | 211 | 109 | 302 | 1.50e-24 | 99.0 |
| MS.gene21112.t1 | MTR_4g027415 | 41.463 | 123 | 70 | 2 | 27 | 149 | 22 | 142 | 6.25e-21 | 85.5 |
| MS.gene21112.t1 | MTR_3g019610 | 40.187 | 107 | 57 | 3 | 8 | 111 | 3 | 105 | 3.35e-15 | 69.3 |
| MS.gene21112.t1 | MTR_2g072560 | 37.719 | 114 | 66 | 2 | 8 | 121 | 7 | 115 | 1.67e-14 | 68.6 |
| MS.gene21112.t1 | MTR_2g030915 | 44.776 | 67 | 25 | 2 | 94 | 160 | 1 | 55 | 9.60e-13 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21112.t1 | AT3G62020 | 69.545 | 220 | 64 | 2 | 1 | 218 | 1 | 219 | 4.08e-108 | 310 |
| MS.gene21112.t1 | AT1G02335 | 64.929 | 211 | 74 | 0 | 8 | 218 | 9 | 219 | 1.93e-101 | 293 |
| MS.gene21112.t1 | AT1G09560 | 70.707 | 198 | 58 | 0 | 21 | 218 | 22 | 219 | 9.73e-100 | 288 |
| MS.gene21112.t1 | AT3G62020 | 74.317 | 183 | 44 | 2 | 38 | 218 | 9 | 190 | 4.98e-98 | 283 |
| MS.gene21112.t1 | AT5G26700 | 60.309 | 194 | 74 | 1 | 25 | 218 | 23 | 213 | 1.50e-86 | 255 |
| MS.gene21112.t1 | AT3G05930 | 53.881 | 219 | 100 | 1 | 1 | 218 | 1 | 219 | 9.42e-79 | 235 |
| MS.gene21112.t1 | AT1G18980 | 46.411 | 209 | 110 | 1 | 7 | 215 | 13 | 219 | 2.11e-64 | 199 |
| MS.gene21112.t1 | AT1G18970 | 46.890 | 209 | 109 | 1 | 7 | 215 | 13 | 219 | 1.06e-63 | 197 |
| MS.gene21112.t1 | AT5G38910 | 49.038 | 208 | 102 | 2 | 11 | 214 | 12 | 219 | 2.35e-62 | 194 |
| MS.gene21112.t1 | AT4G14630 | 50.505 | 198 | 93 | 2 | 21 | 213 | 24 | 221 | 8.11e-62 | 192 |
| MS.gene21112.t1 | AT5G39160 | 45.972 | 211 | 110 | 2 | 9 | 215 | 10 | 220 | 1.17e-61 | 192 |
| MS.gene21112.t1 | AT5G39190 | 45.972 | 211 | 110 | 2 | 9 | 215 | 10 | 220 | 1.94e-61 | 191 |
| MS.gene21112.t1 | AT5G39130 | 45.972 | 211 | 110 | 2 | 9 | 215 | 10 | 220 | 1.98e-61 | 191 |
| MS.gene21112.t1 | AT5G39150 | 46.445 | 211 | 108 | 2 | 8 | 213 | 8 | 218 | 3.03e-61 | 191 |
| MS.gene21112.t1 | AT5G38930 | 49.749 | 199 | 96 | 2 | 19 | 213 | 22 | 220 | 6.84e-61 | 190 |
| MS.gene21112.t1 | AT5G39180 | 46.445 | 211 | 108 | 2 | 8 | 213 | 8 | 218 | 9.40e-61 | 190 |
| MS.gene21112.t1 | AT5G39120 | 48.485 | 198 | 97 | 2 | 21 | 213 | 21 | 218 | 1.05e-60 | 189 |
| MS.gene21112.t1 | AT5G38940 | 49.490 | 196 | 95 | 2 | 22 | 213 | 25 | 220 | 1.33e-60 | 189 |
| MS.gene21112.t1 | AT3G05950 | 48.571 | 210 | 102 | 3 | 12 | 215 | 13 | 222 | 1.46e-60 | 189 |
| MS.gene21112.t1 | AT5G38940 | 49.490 | 196 | 95 | 2 | 22 | 213 | 49 | 244 | 1.97e-60 | 190 |
| MS.gene21112.t1 | AT5G39110 | 47.087 | 206 | 104 | 2 | 13 | 213 | 14 | 219 | 2.17e-60 | 189 |
| MS.gene21112.t1 | AT5G38960 | 48.500 | 200 | 98 | 3 | 21 | 215 | 24 | 223 | 7.17e-60 | 187 |
| MS.gene21112.t1 | AT3G04200 | 45.755 | 212 | 109 | 3 | 11 | 216 | 13 | 224 | 1.85e-59 | 187 |
| MS.gene21112.t1 | AT5G39160 | 44.286 | 210 | 111 | 2 | 9 | 215 | 10 | 216 | 3.48e-58 | 183 |
| MS.gene21112.t1 | AT3G04170 | 44.131 | 213 | 110 | 4 | 11 | 217 | 12 | 221 | 5.48e-52 | 167 |
| MS.gene21112.t1 | AT3G04180 | 43.564 | 202 | 104 | 4 | 17 | 211 | 20 | 218 | 1.20e-50 | 164 |
| MS.gene21112.t1 | AT5G39160 | 40.476 | 210 | 101 | 2 | 9 | 215 | 10 | 198 | 1.55e-50 | 163 |
| MS.gene21112.t1 | AT5G39190 | 40.476 | 210 | 101 | 2 | 9 | 215 | 10 | 198 | 2.52e-50 | 162 |
| MS.gene21112.t1 | AT3G04150 | 41.546 | 207 | 115 | 3 | 11 | 211 | 12 | 218 | 2.61e-50 | 163 |
| MS.gene21112.t1 | AT3G04190 | 42.714 | 199 | 110 | 2 | 17 | 211 | 20 | 218 | 1.37e-49 | 161 |
| MS.gene21112.t1 | AT3G04150 | 39.545 | 220 | 114 | 3 | 11 | 211 | 12 | 231 | 6.54e-49 | 160 |
| MS.gene21112.t1 | AT3G10080 | 41.379 | 203 | 111 | 4 | 19 | 216 | 22 | 221 | 1.37e-47 | 156 |
| MS.gene21112.t1 | AT3G10080 | 41.379 | 203 | 111 | 4 | 19 | 216 | 93 | 292 | 7.54e-47 | 157 |
| MS.gene21112.t1 | AT5G38910 | 41.463 | 205 | 83 | 2 | 11 | 213 | 12 | 181 | 8.91e-43 | 142 |
| MS.gene21112.t1 | AT1G74820 | 36.967 | 211 | 126 | 2 | 8 | 213 | 16 | 224 | 2.04e-42 | 143 |
| MS.gene21112.t1 | AT1G72610 | 37.097 | 186 | 115 | 1 | 26 | 211 | 18 | 201 | 1.97e-39 | 135 |
| MS.gene21112.t1 | AT1G10460 | 38.725 | 204 | 108 | 5 | 22 | 214 | 18 | 215 | 9.01e-39 | 133 |
| MS.gene21112.t1 | AT5G61750 | 40.116 | 172 | 101 | 1 | 11 | 180 | 7 | 178 | 5.46e-38 | 131 |
| MS.gene21112.t1 | AT5G20630 | 36.275 | 204 | 124 | 2 | 8 | 211 | 7 | 204 | 8.83e-37 | 128 |
| MS.gene21112.t1 | AT5G38950 | 39.744 | 78 | 45 | 1 | 143 | 218 | 2 | 79 | 1.18e-12 | 62.4 |
Find 0 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATAAAAATAGTTGAAC+TGG | - | 10913:10088-10107 | MS.gene21112:intron | 15.0% |
| !!! | TACTACTATTATCATTTTTT+TGG | - | 10913:9682-9701 | MS.gene21112:CDS | 15.0% |
| !! | AAAAAAATTGTCCAATTTGT+TGG | + | 10913:9520-9539 | None:intergenic | 20.0% |
| !! | ATTTCTAAGTCCATAAAAAA+AGG | - | 10913:10505-10524 | MS.gene21112:intron | 20.0% |
| !! | CAAAGTTATGTCTAATATTA+TGG | - | 10913:10175-10194 | MS.gene21112:intron | 20.0% |
| !!! | AAAGATTTCACCTTTTTTTA+TGG | + | 10913:10518-10537 | None:intergenic | 20.0% |
| ! | ATTTGAAGGAGTTAAAGAAT+CGG | + | 10913:9980-9999 | None:intergenic | 25.0% |
| ! | GATTAAATTGTTTATGCAAC+TGG | - | 10913:10131-10150 | MS.gene21112:intron | 25.0% |
| ! | TATTATGGTATGTCTTATGT+AGG | - | 10913:10190-10209 | MS.gene21112:intron | 25.0% |
| ! | TGCATTATCAGAAGAATAAT+GGG | - | 10913:10557-10576 | MS.gene21112:intron | 25.0% |
| ! | TGTATAATGCTTCATGTATA+TGG | - | 10913:9627-9646 | MS.gene21112:CDS | 25.0% |
| !!! | AAGTTGTTTTCATAATCACA+CGG | + | 10913:10070-10089 | None:intergenic | 25.0% |
| AAATCTTTGTGTTCCCAAAA+GGG | - | 10913:10530-10549 | MS.gene21112:intron | 30.0% | |
| AGAATAGACTACAAACCTAA+TGG | - | 10913:10385-10404 | MS.gene21112:intron | 30.0% | |
| CATTATACATTACCTGATGA+TGG | + | 10913:9616-9635 | None:intergenic | 30.0% | |
| CTCTAACTTAGTGTTATGTT+TGG | - | 10913:9708-9727 | MS.gene21112:CDS | 30.0% | |
| CTGTTTAGTATCAATCTGAA+AGG | + | 10913:10698-10717 | None:intergenic | 30.0% | |
| CTTTCAGATTGATACTAAAC+AGG | - | 10913:10696-10715 | MS.gene21112:CDS | 30.0% | |
| GCATTATCAGAAGAATAATG+GGG | - | 10913:10558-10577 | MS.gene21112:intron | 30.0% | |
| GTGCATTATCAGAAGAATAA+TGG | - | 10913:10556-10575 | MS.gene21112:intron | 30.0% | |
| TATGTCTTATGTAGGTGTTA+AGG | - | 10913:10198-10217 | MS.gene21112:intron | 30.0% | |
| TGTAGCTATTGCTAAAATTG+TGG | - | 10913:9789-9808 | MS.gene21112:CDS | 30.0% | |
| ! | CAATGAGTTTTGCAAAATCA+AGG | - | 10913:9736-9755 | MS.gene21112:CDS | 30.0% |
| !! | AGTTGTTTTCATAATCACAC+GGG | + | 10913:10069-10088 | None:intergenic | 30.0% |
| !!! | TCCAGGAATTTTTTCAACAT+TGG | + | 10913:10338-10357 | None:intergenic | 30.0% |
| AGCTATTGCTAAAATTGTGG+AGG | - | 10913:9792-9811 | MS.gene21112:CDS | 35.0% | |
| ATTCCCTTATGTACTCTTGA+GGG | - | 10913:9869-9888 | MS.gene21112:CDS | 35.0% | |
| GAAATCTTTGTGTTCCCAAA+AGG | - | 10913:10529-10548 | MS.gene21112:intron | 35.0% | |
| GCCAATGTTGAAAAAATTCC+TGG | - | 10913:10334-10353 | MS.gene21112:intron | 35.0% | |
| TATAGAGTGCATAGTTCACT+CGG | + | 10913:10016-10035 | None:intergenic | 35.0% | |
| TATGTAGGTGTTAAGGTGAA+TGG | - | 10913:10205-10224 | MS.gene21112:intron | 35.0% | |
| TTGGAAGGTGAATTAGATGT+AGG | - | 10913:10457-10476 | MS.gene21112:intron | 35.0% | |
| ! | GAAACAATTGACAAAGTACC+AGG | + | 10913:10625-10644 | None:intergenic | 35.0% |
| !!! | GCAGCTGATTTTTTCTTTGA+TGG | - | 10913:10259-10278 | MS.gene21112:intron | 35.0% |
| AAGGTTGTCAACAACACTGT+AGG | - | 10913:10295-10314 | MS.gene21112:intron | 40.0% | |
| AATTCCTGGACTCAACACAT+TGG | - | 10913:10348-10367 | MS.gene21112:intron | 40.0% | |
| ATTCCTGGACTCAACACATT+GGG | - | 10913:10349-10368 | MS.gene21112:intron | 40.0% | |
| CAAAGGTCTTGAAGTGTATC+AGG | + | 10913:9583-9602 | None:intergenic | 40.0% | |
| CAACAACACTGTAGGATCTT+TGG | - | 10913:10303-10322 | MS.gene21112:intron | 40.0% | |
| CAACACAAAAACAACCTCAG+TGG | + | 10913:10440-10459 | None:intergenic | 40.0% | |
| GATTCCCTTATGTACTCTTG+AGG | - | 10913:9868-9887 | MS.gene21112:CDS | 40.0% | |
| GTTGAGCTAAGGGAATTTGA+AGG | + | 10913:9994-10013 | None:intergenic | 40.0% | |
| TCTGTTTGACTCTACACCAA+CGG | - | 10913:10648-10667 | MS.gene21112:CDS | 40.0% | |
| TGATGGTTTAGCAAACCCTA+AGG | - | 10913:10276-10295 | MS.gene21112:intron | 40.0% | |
| ! | ACAGTGTTGTTGACAACCTT+AGG | + | 10913:10295-10314 | None:intergenic | 40.0% |
| ! | AGACCCTCAAGAGTACATAA+GGG | + | 10913:9875-9894 | None:intergenic | 40.0% |
| ! | ATGATGGAAGAGCTACACAA+AGG | + | 10913:9600-9619 | None:intergenic | 40.0% |
| ! | CAGTGTTGTTGACAACCTTA+GGG | + | 10913:10294-10313 | None:intergenic | 40.0% |
| ! | GATAATGCACCAACCCTTTT+GGG | + | 10913:10546-10565 | None:intergenic | 40.0% |
| ! | GCTTTTAACAGTCAACTTCC+TGG | - | 10913:10604-10623 | MS.gene21112:intron | 40.0% |
| !! | TGATAATGCACCAACCCTTT+TGG | + | 10913:10547-10566 | None:intergenic | 40.0% |
| !!! | CACTGAGGTTGTTTTTGTGT+TGG | - | 10913:10438-10457 | MS.gene21112:intron | 40.0% |
| !!! | GAGGTTGTTTTTGTGTTGGA+AGG | - | 10913:10442-10461 | MS.gene21112:intron | 40.0% |
| AGAACATCATCAGGAACCGT+TGG | + | 10913:10667-10686 | None:intergenic | 45.0% | |
| AGAAGCGAAGGTAGATGAGA+TGG | + | 10913:9557-9576 | None:intergenic | 45.0% | |
| AGTTCACTCGGTTGAGCTAA+GGG | + | 10913:10004-10023 | None:intergenic | 45.0% | |
| CTTTGTGTTCCCAAAAGGGT+TGG | - | 10913:10534-10553 | MS.gene21112:intron | 45.0% | |
| TAGTTCACTCGGTTGAGCTA+AGG | + | 10913:10005-10024 | None:intergenic | 45.0% | |
| TCTTGAGGGTCTGTTTGGAT+TGG | - | 10913:9883-9902 | MS.gene21112:CDS | 45.0% | |
| TGTACTCTTGAGGGTCTGTT+TGG | - | 10913:9878-9897 | MS.gene21112:CDS | 45.0% | |
| TGTATCAGGATCAGAAGCGA+AGG | + | 10913:9569-9588 | None:intergenic | 45.0% | |
| TGTGTAGCTCTTCCATCATC+AGG | - | 10913:9601-9620 | MS.gene21112:CDS | 45.0% | |
| ! | CAGACCCTCAAGAGTACATA+AGG | + | 10913:9876-9895 | None:intergenic | 45.0% |
| ! | GGTGAATGGATTTGCATGCA+AGG | - | 10913:10219-10238 | MS.gene21112:intron | 45.0% |
| ! | TCCTGATGATGTTCTTGCTC+AGG | - | 10913:10672-10691 | MS.gene21112:CDS | 45.0% |
| AAAACAACCTCAGTGGCACG+AGG | + | 10913:10433-10452 | None:intergenic | 50.0% | |
| AAACAACCTCAGTGGCACGA+GGG | + | 10913:10432-10451 | None:intergenic | 50.0% | |
| ACTCCCAATGTGTTGAGTCC+AGG | + | 10913:10355-10374 | None:intergenic | 50.0% | |
| GCCTGAGCAAGAACATCATC+AGG | + | 10913:10676-10695 | None:intergenic | 50.0% | |
| !! | TGTGGCGGGTTAAGACCATT+AGG | + | 10913:10403-10422 | None:intergenic | 50.0% |
| ! | CACACACCCTCGTGCCACTG+AGG | - | 10913:10423-10442 | MS.gene21112:intron | 65.0% |
| ! | CACGAGGGTGTGTGTGTGGC+GGG | + | 10913:10417-10436 | None:intergenic | 65.0% |
| ! | GCACGAGGGTGTGTGTGTGG+CGG | + | 10913:10418-10437 | None:intergenic | 65.0% |
| ! | GTGGCACGAGGGTGTGTGTG+TGG | + | 10913:10421-10440 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 10913 | gene | 9511 | 10759 | 9511 | ID=MS.gene21112 |
| 10913 | mRNA | 9511 | 10759 | 9511 | ID=MS.gene21112.t1;Parent=MS.gene21112 |
| 10913 | exon | 10648 | 10759 | 10648 | ID=MS.gene21112.t1.exon1;Parent=MS.gene21112.t1 |
| 10913 | CDS | 10648 | 10759 | 10648 | ID=cds.MS.gene21112.t1;Parent=MS.gene21112.t1 |
| 10913 | exon | 9511 | 10058 | 9511 | ID=MS.gene21112.t1.exon2;Parent=MS.gene21112.t1 |
| 10913 | CDS | 9511 | 10058 | 9511 | ID=cds.MS.gene21112.t1;Parent=MS.gene21112.t1 |
| Gene Sequence |
| Protein sequence |
