Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21177.t1 | RHN81020.1 | 80.1 | 397 | 74 | 2 | 1 | 394 | 145 | 539 | 3.30E-176 | 627.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21177.t1 | Q9FZ24 | 44.9 | 361 | 189 | 6 | 2 | 354 | 127 | 485 | 3.1e-82 | 307.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21177.t1 | G7ICW4 | 80.1 | 397 | 74 | 2 | 1 | 394 | 86 | 480 | 2.3e-176 | 627.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene008863 | MS.gene21177 | PPI |
MS.gene068116 | MS.gene21177 | PPI |
MS.gene21177 | MS.gene008871 | PPI |
MS.gene21177 | MS.gene067932 | PPI |
MS.gene69362 | MS.gene21177 | PPI |
MS.gene067938 | MS.gene21177 | PPI |
MS.gene21177 | MS.gene056432 | PPI |
MS.gene21177 | MS.gene068108 | PPI |
MS.gene014383 | MS.gene21177 | PPI |
MS.gene21177 | MS.gene52807 | PPI |
MS.gene068115 | MS.gene21177 | PPI |
MS.gene008872 | MS.gene21177 | PPI |
MS.gene064795 | MS.gene21177 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21177.t1 | MTR_1g086820 | 80.101 | 397 | 74 | 2 | 1 | 394 | 86 | 480 | 0.0 | 650 |
MS.gene21177.t1 | MTR_8g069570 | 39.186 | 393 | 224 | 7 | 14 | 394 | 94 | 483 | 8.67e-84 | 264 |
MS.gene21177.t1 | MTR_8g007375 | 32.361 | 377 | 248 | 5 | 14 | 386 | 16 | 389 | 9.70e-54 | 183 |
MS.gene21177.t1 | MTR_2g013450 | 28.070 | 399 | 266 | 8 | 2 | 385 | 84 | 476 | 1.53e-43 | 158 |
MS.gene21177.t1 | MTR_1g072300 | 29.315 | 365 | 242 | 7 | 2 | 356 | 93 | 451 | 1.16e-41 | 153 |
MS.gene21177.t1 | MTR_8g059115 | 27.457 | 346 | 247 | 3 | 13 | 356 | 14 | 357 | 6.49e-41 | 149 |
MS.gene21177.t1 | MTR_2g047855 | 32.082 | 293 | 190 | 5 | 2 | 288 | 87 | 376 | 1.38e-40 | 150 |
MS.gene21177.t1 | MTR_3g099753 | 28.614 | 332 | 231 | 4 | 13 | 340 | 108 | 437 | 1.45e-39 | 147 |
MS.gene21177.t1 | MTR_3g099753 | 28.614 | 332 | 231 | 4 | 13 | 340 | 132 | 461 | 2.68e-39 | 147 |
MS.gene21177.t1 | MTR_8g465890 | 28.977 | 352 | 237 | 6 | 2 | 344 | 83 | 430 | 2.19e-37 | 141 |
MS.gene21177.t1 | MTR_2g090290 | 31.502 | 273 | 173 | 5 | 19 | 281 | 109 | 377 | 2.89e-33 | 130 |
MS.gene21177.t1 | MTR_1g022400 | 29.242 | 277 | 186 | 7 | 13 | 281 | 125 | 399 | 1.46e-28 | 115 |
MS.gene21177.t1 | MTR_8g031520 | 38.710 | 124 | 75 | 1 | 14 | 136 | 177 | 300 | 3.70e-17 | 81.6 |
MS.gene21177.t1 | MTR_7g089770 | 23.184 | 358 | 252 | 12 | 2 | 350 | 212 | 555 | 1.51e-15 | 79.0 |
MS.gene21177.t1 | MTR_2g096880 | 24.895 | 237 | 172 | 4 | 13 | 247 | 114 | 346 | 1.30e-13 | 72.8 |
MS.gene21177.t1 | MTR_1g050750 | 25.911 | 247 | 176 | 5 | 13 | 256 | 161 | 403 | 9.16e-13 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene21177.t1 | AT1G02370 | 44.875 | 361 | 189 | 6 | 2 | 354 | 127 | 485 | 2.11e-103 | 316 |
MS.gene21177.t1 | AT4G01990 | 44.413 | 358 | 191 | 5 | 2 | 354 | 96 | 450 | 5.10e-99 | 303 |
MS.gene21177.t1 | AT1G60770 | 37.592 | 407 | 237 | 9 | 1 | 394 | 81 | 483 | 1.81e-80 | 255 |
MS.gene21177.t1 | AT1G02150 | 33.430 | 344 | 225 | 3 | 14 | 355 | 140 | 481 | 2.92e-57 | 196 |
MS.gene21177.t1 | AT5G27460 | 31.921 | 354 | 229 | 6 | 1 | 344 | 93 | 444 | 1.14e-48 | 172 |
MS.gene21177.t1 | AT4G21705 | 30.959 | 365 | 237 | 8 | 2 | 356 | 81 | 440 | 6.94e-48 | 170 |
MS.gene21177.t1 | AT2G20710 | 30.523 | 344 | 231 | 5 | 14 | 355 | 15 | 352 | 1.68e-46 | 164 |
MS.gene21177.t1 | AT2G20710 | 30.523 | 344 | 231 | 5 | 14 | 355 | 110 | 447 | 1.52e-45 | 164 |
MS.gene21177.t1 | AT4G02820 | 27.960 | 397 | 265 | 8 | 2 | 385 | 117 | 505 | 4.99e-40 | 149 |
MS.gene21177.t1 | AT5G09450 | 32.932 | 249 | 154 | 7 | 13 | 253 | 126 | 369 | 9.46e-32 | 124 |
MS.gene21177.t1 | AT1G28020 | 30.357 | 280 | 185 | 6 | 2 | 273 | 92 | 369 | 3.39e-29 | 119 |
MS.gene21177.t1 | AT1G80270 | 23.762 | 404 | 270 | 14 | 2 | 385 | 184 | 569 | 1.28e-17 | 85.1 |
MS.gene21177.t1 | AT1G80270 | 23.762 | 404 | 270 | 14 | 2 | 385 | 184 | 569 | 1.28e-17 | 85.1 |
MS.gene21177.t1 | AT1G80270 | 23.762 | 404 | 270 | 14 | 2 | 385 | 184 | 569 | 1.28e-17 | 85.1 |
MS.gene21177.t1 | AT1G80270 | 23.762 | 404 | 270 | 14 | 2 | 385 | 184 | 569 | 1.28e-17 | 85.1 |
MS.gene21177.t1 | AT1G80270 | 23.762 | 404 | 270 | 14 | 2 | 385 | 184 | 569 | 1.28e-17 | 85.1 |
MS.gene21177.t1 | AT3G15590 | 30.653 | 199 | 129 | 5 | 12 | 207 | 211 | 403 | 2.58e-15 | 78.2 |
MS.gene21177.t1 | AT3G15590 | 30.653 | 199 | 129 | 5 | 12 | 207 | 211 | 403 | 2.58e-15 | 78.2 |
MS.gene21177.t1 | AT3G11380 | 26.389 | 288 | 171 | 6 | 2 | 281 | 99 | 353 | 2.75e-15 | 77.8 |
MS.gene21177.t1 | AT1G15480 | 26.201 | 229 | 161 | 5 | 13 | 238 | 197 | 420 | 1.36e-14 | 75.9 |
MS.gene21177.t1 | AT1G07590 | 23.345 | 287 | 206 | 6 | 1 | 279 | 120 | 400 | 7.69e-13 | 70.5 |
Find 73 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGGCATAATAACATTGTTTA+AGG | 0.231511 | 1.2:-65293253 | MS.gene21177:CDS |
AGGACCTTTCTTTAGGATTC+AGG | 0.243843 | 1.2:-65293106 | MS.gene21177:CDS |
CCGTATCATTAAGCCTTCTA+AGG | 0.261570 | 1.2:+65293277 | None:intergenic |
AAGCTGAGTTGATGCTTAAA+AGG | 0.266289 | 1.2:-65293458 | MS.gene21177:CDS |
ATTGTTCATGCTGTATTTAT+TGG | 0.275275 | 1.2:-65293082 | MS.gene21177:CDS |
TTTGATAAGATGGATGAATT+AGG | 0.276635 | 1.2:-65293765 | MS.gene21177:CDS |
CATCACTTGTTGAGCCTCTA+TGG | 0.288847 | 1.2:-65293396 | MS.gene21177:CDS |
TTTGTCTTTCACCAATTTGA+TGG | 0.304398 | 1.2:-65293730 | MS.gene21177:CDS |
TTATGCTTTCTACCCTTAGA+AGG | 0.334013 | 1.2:-65293290 | MS.gene21177:CDS |
CATATACAAAACCATCAAAT+TGG | 0.348712 | 1.2:+65293719 | None:intergenic |
GGTGTAGAGGACCTTTCTTT+AGG | 0.358064 | 1.2:-65293113 | MS.gene21177:CDS |
CTGAATTTACATACACTGTT+TGG | 0.374347 | 1.2:-65293629 | MS.gene21177:CDS |
TTAAACAGGTTTATAGAGTC+TGG | 0.387267 | 1.2:-65293359 | MS.gene21177:CDS |
TGGTACTGGTAATGTTAAAC+AGG | 0.422414 | 1.2:-65293373 | MS.gene21177:CDS |
CAGCTTTGAATGACATTGGT+GGG | 0.429431 | 1.2:-65293593 | MS.gene21177:CDS |
AAGACAAAGACAAAATTGAT+TGG | 0.437683 | 1.2:-65293533 | MS.gene21177:CDS |
AGTAATGCAAGTTTCAATAC+AGG | 0.442716 | 1.2:+65292876 | None:intergenic |
GGCTCATAGCACCATTCAAT+TGG | 0.443758 | 1.2:+65293052 | None:intergenic |
TCAGTTGGTTAATGTTATGA+AGG | 0.445036 | 1.2:-65293670 | MS.gene21177:CDS |
TGGGGTTGAAAGGGTTTATG+AGG | 0.447556 | 1.2:-65293574 | MS.gene21177:CDS |
ATGAGTTAAGCAAGATTCTC+AGG | 0.451952 | 1.2:-65292918 | MS.gene21177:CDS |
CATAATAAAATAGCTATGAT+TGG | 0.458064 | 1.2:+65293308 | None:intergenic |
ATGACATTGGTGGGGTTGAA+AGG | 0.462059 | 1.2:-65293584 | MS.gene21177:CDS |
TTGAGCCTCTATGGTGGTAC+TGG | 0.464901 | 1.2:-65293387 | MS.gene21177:CDS |
TGGTATTCATCAAGTATTGA+AGG | 0.467131 | 1.2:-65292836 | MS.gene21177:CDS |
TGACATTGGTGGGGTTGAAA+GGG | 0.469956 | 1.2:-65293583 | MS.gene21177:CDS |
AATAACATTGTTTAAGGAGT+GGG | 0.471012 | 1.2:-65293247 | MS.gene21177:CDS |
TGGTAACTTTCGCGTTGCAC+TGG | 0.472277 | 1.2:+65293417 | None:intergenic |
TTCAATCACTCCTTTCACTT+TGG | 0.474139 | 1.2:+65293899 | None:intergenic |
AGCTTGTTAATTATGATACA+AGG | 0.497708 | 1.2:-65293218 | MS.gene21177:CDS |
GCTGCTATCTATATAAAAGC+TGG | 0.505469 | 1.2:-65293492 | MS.gene21177:CDS |
ACTGCATCTGAATCATCTCT+TGG | 0.510797 | 1.2:-65292856 | MS.gene21177:CDS |
CCTTAGAAGGCTTAATGATA+CGG | 0.522341 | 1.2:-65293277 | MS.gene21177:CDS |
AATTATGATACAAGGTTGGC+TGG | 0.523312 | 1.2:-65293210 | MS.gene21177:CDS |
TTGGAGATATGCCAATTGAA+TGG | 0.531282 | 1.2:-65293063 | MS.gene21177:CDS |
AATTCCTGAATCCTAAAGAA+AGG | 0.537404 | 1.2:+65293102 | None:intergenic |
TGTTAATTATGATACAAGGT+TGG | 0.541417 | 1.2:-65293214 | MS.gene21177:CDS |
GTTACAAGTTCTCGTGTGCA+TGG | 0.545024 | 1.2:+65292797 | None:intergenic |
CAGTTGGTTAATGTTATGAA+GGG | 0.560663 | 1.2:-65293669 | MS.gene21177:CDS |
AGAAAAGCACTCACAACTTG+TGG | 0.563214 | 1.2:+65292979 | None:intergenic |
GCAGCTTTGAATGACATTGG+TGG | 0.569276 | 1.2:-65293594 | MS.gene21177:CDS |
AGCTTTGAATGACATTGGTG+GGG | 0.572390 | 1.2:-65293592 | MS.gene21177:CDS |
CTTCTAAACTGTTACTGCAA+GGG | 0.573008 | 1.2:-65293816 | MS.gene21177:CDS |
GCACTCACAACTTGTGGTGA+AGG | 0.577944 | 1.2:+65292985 | None:intergenic |
TAATAACATTGTTTAAGGAG+TGG | 0.580243 | 1.2:-65293248 | MS.gene21177:CDS |
TATCTTGTGTCCAAAGTGAA+AGG | 0.580372 | 1.2:-65293909 | MS.gene21177:CDS |
TACGCTCAAGAAGGTCTCAC+CGG | 0.582181 | 1.2:-65293334 | MS.gene21177:CDS |
GAAGCCGCACTTTCAGAAGT+CGG | 0.583270 | 1.2:-65293024 | MS.gene21177:CDS |
TCTTCTAAACTGTTACTGCA+AGG | 0.585829 | 1.2:-65293817 | MS.gene21177:CDS |
AATGGTTGCAGATAATGGAA+TGG | 0.590967 | 1.2:-65293974 | None:intergenic |
AAGGCTCTTAAGCGGTGTAG+AGG | 0.591462 | 1.2:-65293126 | MS.gene21177:CDS |
CTGAAAGTGCGGCTTCTAAG+TGG | 0.596496 | 1.2:+65293031 | None:intergenic |
CATAGAGGCTCAACAAGTGA+TGG | 0.603610 | 1.2:+65293397 | None:intergenic |
CGTATCATTAAGCCTTCTAA+GGG | 0.604610 | 1.2:+65293278 | None:intergenic |
CATTACCAGTACCACCATAG+AGG | 0.605854 | 1.2:+65293382 | None:intergenic |
TTCATAACATTAACCAACTG+AGG | 0.615039 | 1.2:+65293672 | None:intergenic |
AAGGTTGGCTGGTGTTGCAG+TGG | 0.615366 | 1.2:-65293199 | MS.gene21177:CDS |
TGTGCAGCTTTGAATGACAT+TGG | 0.616404 | 1.2:-65293597 | MS.gene21177:CDS |
GCTCAGAACATGTACACATA+CGG | 0.618377 | 1.2:-65293843 | MS.gene21177:CDS |
AGAAGGCTTAATGATACGGA+GGG | 0.620270 | 1.2:-65293273 | MS.gene21177:CDS |
AAATAGCTATGATTGGTCAC+CGG | 0.622313 | 1.2:+65293315 | None:intergenic |
AGTCTGGAGTACGCTCAAGA+AGG | 0.623685 | 1.2:-65293343 | MS.gene21177:CDS |
TGCTTACTTGAGTCAAAACA+TGG | 0.625673 | 1.2:-65293175 | MS.gene21177:CDS |
AGCTATGTCGATCTTTGAGA+AGG | 0.634352 | 1.2:-65293145 | MS.gene21177:CDS |
AGTTGGTTAATGTTATGAAG+GGG | 0.635275 | 1.2:-65293668 | MS.gene21177:CDS |
CACTTGTTGAGCCTCTATGG+TGG | 0.635576 | 1.2:-65293393 | MS.gene21177:CDS |
TCACAACTTGTGGTGAAGGA+CGG | 0.645990 | 1.2:+65292989 | None:intergenic |
GTGTACATGTTCTGAGCACG+AGG | 0.648813 | 1.2:+65293849 | None:intergenic |
CAAGGGACTAATGCTAGACA+AGG | 0.652550 | 1.2:-65293799 | MS.gene21177:CDS |
TAGAAGGCTTAATGATACGG+AGG | 0.655243 | 1.2:-65293274 | MS.gene21177:CDS |
TCTTTGAGAAGGCTCTTAAG+CGG | 0.664916 | 1.2:-65293134 | MS.gene21177:CDS |
ATCGCCGACTTCTGAAAGTG+CGG | 0.674194 | 1.2:+65293020 | None:intergenic |
TACATGTTCTGAGCACGAGG+AGG | 0.707918 | 1.2:+65293852 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATAATAAAATAGCTATGAT+TGG | + | chr1.2:65293453-65293472 | None:intergenic | 20.0% |
!!! | AATTTGATGGTTTTGTATAT+GGG | - | chr1.2:65293041-65293060 | MS.gene21177:CDS | 20.0% |
! | AAGACAAAGACAAAATTGAT+TGG | - | chr1.2:65293225-65293244 | MS.gene21177:CDS | 25.0% |
! | AATAACATTGTTTAAGGAGT+GGG | - | chr1.2:65293511-65293530 | MS.gene21177:CDS | 25.0% |
! | ATTGTTCATGCTGTATTTAT+TGG | - | chr1.2:65293676-65293695 | MS.gene21177:CDS | 25.0% |
! | CATATACAAAACCATCAAAT+TGG | + | chr1.2:65293042-65293061 | None:intergenic | 25.0% |
! | TAATAACATTGTTTAAGGAG+TGG | - | chr1.2:65293510-65293529 | MS.gene21177:CDS | 25.0% |
! | TGTTAATTATGATACAAGGT+TGG | - | chr1.2:65293544-65293563 | MS.gene21177:CDS | 25.0% |
! | TTTGATAAGATGGATGAATT+AGG | - | chr1.2:65292993-65293012 | MS.gene21177:CDS | 25.0% |
!! | ATTGTCTCTTTTTGATAAGA+TGG | - | chr1.2:65292983-65293002 | MS.gene21177:CDS | 25.0% |
!!! | AGCTTGTTAATTATGATACA+AGG | - | chr1.2:65293540-65293559 | MS.gene21177:CDS | 25.0% |
!!! | ATTTGATGGTTTTGTATATG+GGG | - | chr1.2:65293042-65293061 | MS.gene21177:CDS | 25.0% |
!!! | CAATTTGATGGTTTTGTATA+TGG | - | chr1.2:65293040-65293059 | MS.gene21177:CDS | 25.0% |
AATTCCTGAATCCTAAAGAA+AGG | + | chr1.2:65293659-65293678 | None:intergenic | 30.0% | |
AGTAATGCAAGTTTCAATAC+AGG | + | chr1.2:65293885-65293904 | None:intergenic | 30.0% | |
AGTTGGTTAATGTTATGAAG+GGG | - | chr1.2:65293090-65293109 | MS.gene21177:CDS | 30.0% | |
CAGTTGGTTAATGTTATGAA+GGG | - | chr1.2:65293089-65293108 | MS.gene21177:CDS | 30.0% | |
CTGAATTTACATACACTGTT+TGG | - | chr1.2:65293129-65293148 | MS.gene21177:CDS | 30.0% | |
GAAAAAGAGACAGATCTTAA+TGG | - | chr1.2:65293812-65293831 | MS.gene21177:CDS | 30.0% | |
GGGCATAATAACATTGTTTA+AGG | - | chr1.2:65293505-65293524 | MS.gene21177:CDS | 30.0% | |
TCAGTTGGTTAATGTTATGA+AGG | - | chr1.2:65293088-65293107 | MS.gene21177:CDS | 30.0% | |
TTAAACAGGTTTATAGAGTC+TGG | - | chr1.2:65293399-65293418 | MS.gene21177:CDS | 30.0% | |
TTCATAACATTAACCAACTG+AGG | + | chr1.2:65293089-65293108 | None:intergenic | 30.0% | |
TTTGTCTTTCACCAATTTGA+TGG | - | chr1.2:65293028-65293047 | MS.gene21177:CDS | 30.0% | |
! | CTTTTATATAGATAGCAGCA+AGG | + | chr1.2:65293265-65293284 | None:intergenic | 30.0% |
!! | TGGTATTCATCAAGTATTGA+AGG | - | chr1.2:65293922-65293941 | MS.gene21177:CDS | 30.0% |
AATTATGATACAAGGTTGGC+TGG | - | chr1.2:65293548-65293567 | MS.gene21177:CDS | 35.0% | |
ATGAGTTAAGCAAGATTCTC+AGG | - | chr1.2:65293840-65293859 | MS.gene21177:CDS | 35.0% | |
CCTTAGAAGGCTTAATGATA+CGG | - | chr1.2:65293481-65293500 | MS.gene21177:CDS | 35.0% | |
CGTATCATTAAGCCTTCTAA+GGG | + | chr1.2:65293483-65293502 | None:intergenic | 35.0% | |
CTTCTAAACTGTTACTGCAA+GGG | - | chr1.2:65292942-65292961 | MS.gene21177:CDS | 35.0% | |
GCTGCTATCTATATAAAAGC+TGG | - | chr1.2:65293266-65293285 | MS.gene21177:CDS | 35.0% | |
TATCTTGTGTCCAAAGTGAA+AGG | - | chr1.2:65292849-65292868 | MS.gene21177:CDS | 35.0% | |
TCTTCTAAACTGTTACTGCA+AGG | - | chr1.2:65292941-65292960 | MS.gene21177:CDS | 35.0% | |
TGCTTACTTGAGTCAAAACA+TGG | - | chr1.2:65293583-65293602 | MS.gene21177:CDS | 35.0% | |
TTATGCTTTCTACCCTTAGA+AGG | - | chr1.2:65293468-65293487 | MS.gene21177:CDS | 35.0% | |
TTCAATCACTCCTTTCACTT+TGG | + | chr1.2:65292862-65292881 | None:intergenic | 35.0% | |
TTGGAGATATGCCAATTGAA+TGG | - | chr1.2:65293695-65293714 | MS.gene21177:CDS | 35.0% | |
! | AAATAGCTATGATTGGTCAC+CGG | + | chr1.2:65293446-65293465 | None:intergenic | 35.0% |
! | AACCAACTGAGGAACTTTTT+GGG | + | chr1.2:65293078-65293097 | None:intergenic | 35.0% |
! | TAACCAACTGAGGAACTTTT+TGG | + | chr1.2:65293079-65293098 | None:intergenic | 35.0% |
!! | AAGCTGAGTTGATGCTTAAA+AGG | - | chr1.2:65293300-65293319 | MS.gene21177:CDS | 35.0% |
!! | TGGTACTGGTAATGTTAAAC+AGG | - | chr1.2:65293385-65293404 | MS.gene21177:CDS | 35.0% |
ACTGCATCTGAATCATCTCT+TGG | - | chr1.2:65293902-65293921 | MS.gene21177:CDS | 40.0% | |
AGAAGGCTTAATGATACGGA+GGG | - | chr1.2:65293485-65293504 | MS.gene21177:CDS | 40.0% | |
CCGTATCATTAAGCCTTCTA+AGG | + | chr1.2:65293484-65293503 | None:intergenic | 40.0% | |
GCTCAGAACATGTACACATA+CGG | - | chr1.2:65292915-65292934 | MS.gene21177:CDS | 40.0% | |
TAGAAGGCTTAATGATACGG+AGG | - | chr1.2:65293484-65293503 | MS.gene21177:CDS | 40.0% | |
! | ACCAACTGAGGAACTTTTTG+GGG | + | chr1.2:65293077-65293096 | None:intergenic | 40.0% |
! | AGCTATGTCGATCTTTGAGA+AGG | - | chr1.2:65293613-65293632 | MS.gene21177:CDS | 40.0% |
! | TCTTTGAGAAGGCTCTTAAG+CGG | - | chr1.2:65293624-65293643 | MS.gene21177:CDS | 40.0% |
!! | AGAAAAGCACTCACAACTTG+TGG | + | chr1.2:65293782-65293801 | None:intergenic | 40.0% |
!! | AGCTTTGAATGACATTGGTG+GGG | - | chr1.2:65293166-65293185 | MS.gene21177:CDS | 40.0% |
!! | AGGACCTTTCTTTAGGATTC+AGG | - | chr1.2:65293652-65293671 | MS.gene21177:CDS | 40.0% |
!! | CAGCTTTGAATGACATTGGT+GGG | - | chr1.2:65293165-65293184 | MS.gene21177:CDS | 40.0% |
!! | TGTGCAGCTTTGAATGACAT+TGG | - | chr1.2:65293161-65293180 | MS.gene21177:CDS | 40.0% |
!!! | ATGGTTTTGTATATGGGGCT+AGG | - | chr1.2:65293047-65293066 | MS.gene21177:CDS | 40.0% |
ACCCCAAAAAGTTCCTCAGT+TGG | - | chr1.2:65293073-65293092 | MS.gene21177:CDS | 45.0% | |
ATGACATTGGTGGGGTTGAA+AGG | - | chr1.2:65293174-65293193 | MS.gene21177:CDS | 45.0% | |
CAAGGGACTAATGCTAGACA+AGG | - | chr1.2:65292959-65292978 | MS.gene21177:CDS | 45.0% | |
CATAGAGGCTCAACAAGTGA+TGG | + | chr1.2:65293364-65293383 | None:intergenic | 45.0% | |
CATTACCAGTACCACCATAG+AGG | + | chr1.2:65293379-65293398 | None:intergenic | 45.0% | |
GGCTCATAGCACCATTCAAT+TGG | + | chr1.2:65293709-65293728 | None:intergenic | 45.0% | |
GGTGTAGAGGACCTTTCTTT+AGG | - | chr1.2:65293645-65293664 | MS.gene21177:CDS | 45.0% | |
TCACAACTTGTGGTGAAGGA+CGG | + | chr1.2:65293772-65293791 | None:intergenic | 45.0% | |
TGACATTGGTGGGGTTGAAA+GGG | - | chr1.2:65293175-65293194 | MS.gene21177:CDS | 45.0% | |
TGGGGTTGAAAGGGTTTATG+AGG | - | chr1.2:65293184-65293203 | MS.gene21177:CDS | 45.0% | |
! | CATCACTTGTTGAGCCTCTA+TGG | - | chr1.2:65293362-65293381 | MS.gene21177:CDS | 45.0% |
!! | GCAGCTTTGAATGACATTGG+TGG | - | chr1.2:65293164-65293183 | MS.gene21177:CDS | 45.0% |
AAGGCTCTTAAGCGGTGTAG+AGG | - | chr1.2:65293632-65293651 | MS.gene21177:CDS | 50.0% | |
GAAGCCGCACTTTCAGAAGT+CGG | - | chr1.2:65293734-65293753 | MS.gene21177:CDS | 50.0% | |
GCACTCACAACTTGTGGTGA+AGG | + | chr1.2:65293776-65293795 | None:intergenic | 50.0% | |
TACGCTCAAGAAGGTCTCAC+CGG | - | chr1.2:65293424-65293443 | MS.gene21177:CDS | 50.0% | |
TGGTAACTTTCGCGTTGCAC+TGG | + | chr1.2:65293344-65293363 | None:intergenic | 50.0% | |
TTGAGCCTCTATGGTGGTAC+TGG | - | chr1.2:65293371-65293390 | MS.gene21177:CDS | 50.0% | |
! | AGTCTGGAGTACGCTCAAGA+AGG | - | chr1.2:65293415-65293434 | MS.gene21177:CDS | 50.0% |
! | CACTTGTTGAGCCTCTATGG+TGG | - | chr1.2:65293365-65293384 | MS.gene21177:CDS | 50.0% |
! | CTGAAAGTGCGGCTTCTAAG+TGG | + | chr1.2:65293730-65293749 | None:intergenic | 50.0% |
! | GTGTACATGTTCTGAGCACG+AGG | + | chr1.2:65292912-65292931 | None:intergenic | 50.0% |
! | TACATGTTCTGAGCACGAGG+AGG | + | chr1.2:65292909-65292928 | None:intergenic | 50.0% |
!! | ATCGCCGACTTCTGAAAGTG+CGG | + | chr1.2:65293741-65293760 | None:intergenic | 50.0% |
!! | AAGGTTGGCTGGTGTTGCAG+TGG | - | chr1.2:65293559-65293578 | MS.gene21177:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 65292798 | 65293982 | 65292798 | ID=MS.gene21177 |
chr1.2 | mRNA | 65292798 | 65293982 | 65292798 | ID=MS.gene21177.t1;Parent=MS.gene21177 |
chr1.2 | exon | 65292798 | 65293982 | 65292798 | ID=MS.gene21177.t1.exon1;Parent=MS.gene21177.t1 |
chr1.2 | CDS | 65292798 | 65293982 | 65292798 | ID=cds.MS.gene21177.t1;Parent=MS.gene21177.t1 |
Gene Sequence |
Protein sequence |