AlfalfaGEDB | MS.gene21180

M. sativa cultivar XinJiangDaYe / MS.gene21180

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF01535.23 PF13041.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21180.t1	RHN81020.1	80.1	397	74	2	1	394	145	539	3.30E-176	627.9

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21180.t1	Q9FZ24	44.9	361	189	6	2	354	127	485	3.1e-82	307.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21180.t1	G7ICW4	80.1	397	74	2	1	394	86	480	2.3e-176	627.9

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene21180	MS.gene52807	PPI
MS.gene21180	MS.gene064795	PPI
MS.gene21180	MS.gene008871	PPI
MS.gene21180	MS.gene69362	PPI
MS.gene21180	MS.gene067932	PPI
MS.gene21180	MS.gene068115	PPI
MS.gene21180	MS.gene008872	PPI
MS.gene014383	MS.gene21180	PPI
MS.gene21180	MS.gene008863	PPI
MS.gene068116	MS.gene21180	PPI
MS.gene21180	MS.gene056432	PPI
MS.gene21180	MS.gene067938	PPI
MS.gene21180	MS.gene068108	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21180.t1	MTR_1g086820	80.101	397	74	2	1	394	86	480	0.0	650
MS.gene21180.t1	MTR_8g069570	39.186	393	224	7	14	394	94	483	8.67e-84	264
MS.gene21180.t1	MTR_8g007375	32.361	377	248	5	14	386	16	389	9.70e-54	183
MS.gene21180.t1	MTR_2g013450	28.070	399	266	8	2	385	84	476	1.53e-43	158
MS.gene21180.t1	MTR_1g072300	29.315	365	242	7	2	356	93	451	1.16e-41	153
MS.gene21180.t1	MTR_8g059115	27.457	346	247	3	13	356	14	357	6.49e-41	149
MS.gene21180.t1	MTR_2g047855	32.082	293	190	5	2	288	87	376	1.38e-40	150
MS.gene21180.t1	MTR_3g099753	28.614	332	231	4	13	340	108	437	1.45e-39	147
MS.gene21180.t1	MTR_3g099753	28.614	332	231	4	13	340	132	461	2.68e-39	147
MS.gene21180.t1	MTR_8g465890	28.977	352	237	6	2	344	83	430	2.19e-37	141
MS.gene21180.t1	MTR_2g090290	31.502	273	173	5	19	281	109	377	2.89e-33	130
MS.gene21180.t1	MTR_1g022400	29.242	277	186	7	13	281	125	399	1.46e-28	115
MS.gene21180.t1	MTR_8g031520	38.710	124	75	1	14	136	177	300	3.70e-17	81.6
MS.gene21180.t1	MTR_7g089770	23.184	358	252	12	2	350	212	555	1.51e-15	79.0
MS.gene21180.t1	MTR_2g096880	24.895	237	172	4	13	247	114	346	1.30e-13	72.8
MS.gene21180.t1	MTR_1g050750	25.911	247	176	5	13	256	161	403	9.16e-13	70.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21180.t1	AT1G02370	44.875	361	189	6	2	354	127	485	2.11e-103	316
MS.gene21180.t1	AT4G01990	44.413	358	191	5	2	354	96	450	5.10e-99	303
MS.gene21180.t1	AT1G60770	37.592	407	237	9	1	394	81	483	1.81e-80	255
MS.gene21180.t1	AT1G02150	33.430	344	225	3	14	355	140	481	2.92e-57	196
MS.gene21180.t1	AT5G27460	31.921	354	229	6	1	344	93	444	1.14e-48	172
MS.gene21180.t1	AT4G21705	30.959	365	237	8	2	356	81	440	6.94e-48	170
MS.gene21180.t1	AT2G20710	30.523	344	231	5	14	355	15	352	1.68e-46	164
MS.gene21180.t1	AT2G20710	30.523	344	231	5	14	355	110	447	1.52e-45	164
MS.gene21180.t1	AT4G02820	27.960	397	265	8	2	385	117	505	4.99e-40	149
MS.gene21180.t1	AT5G09450	32.932	249	154	7	13	253	126	369	9.46e-32	124
MS.gene21180.t1	AT1G28020	30.357	280	185	6	2	273	92	369	3.39e-29	119
MS.gene21180.t1	AT1G80270	23.762	404	270	14	2	385	184	569	1.28e-17	85.1
MS.gene21180.t1	AT1G80270	23.762	404	270	14	2	385	184	569	1.28e-17	85.1
MS.gene21180.t1	AT1G80270	23.762	404	270	14	2	385	184	569	1.28e-17	85.1
MS.gene21180.t1	AT1G80270	23.762	404	270	14	2	385	184	569	1.28e-17	85.1
MS.gene21180.t1	AT1G80270	23.762	404	270	14	2	385	184	569	1.28e-17	85.1
MS.gene21180.t1	AT3G15590	30.653	199	129	5	12	207	211	403	2.58e-15	78.2
MS.gene21180.t1	AT3G15590	30.653	199	129	5	12	207	211	403	2.58e-15	78.2
MS.gene21180.t1	AT3G11380	26.389	288	171	6	2	281	99	353	2.75e-15	77.8
MS.gene21180.t1	AT1G15480	26.201	229	161	5	13	238	197	420	1.36e-14	75.9
MS.gene21180.t1	AT1G07590	23.345	287	206	6	1	279	120	400	7.69e-13	70.5

Find 73 sgRNAs with CRISPR-Local

Find 82 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGGCATAATAACATTGTTTA+AGG	0.231511	1.2:-65266755	MS.gene21180:CDS
AGGACCTTTCTTTAGGATTC+AGG	0.243843	1.2:-65266608	MS.gene21180:CDS
CCGTATCATTAAGCCTTCTA+AGG	0.261570	1.2:+65266779	None:intergenic
AAGCTGAGTTGATGCTTAAA+AGG	0.266289	1.2:-65266960	MS.gene21180:CDS
ATTGTTCATGCTGTATTTAT+TGG	0.275275	1.2:-65266584	MS.gene21180:CDS
TTTGATAAGATGGATGAATT+AGG	0.276635	1.2:-65267267	MS.gene21180:CDS
CATCACTTGTTGAGCCTCTA+TGG	0.288847	1.2:-65266898	MS.gene21180:CDS
TTTGTCTTTCACCAATTTGA+TGG	0.304398	1.2:-65267232	MS.gene21180:CDS
TTATGCTTTCTACCCTTAGA+AGG	0.334013	1.2:-65266792	MS.gene21180:CDS
CATATACAAAACCATCAAAT+TGG	0.348712	1.2:+65267221	None:intergenic
GGTGTAGAGGACCTTTCTTT+AGG	0.358064	1.2:-65266615	MS.gene21180:CDS
CTGAATTTACATACACTGTT+TGG	0.374347	1.2:-65267131	MS.gene21180:CDS
TTAAACAGGTTTATAGAGTC+TGG	0.387267	1.2:-65266861	MS.gene21180:CDS
TGGTACTGGTAATGTTAAAC+AGG	0.422414	1.2:-65266875	MS.gene21180:CDS
CAGCTTTGAATGACATTGGT+GGG	0.429431	1.2:-65267095	MS.gene21180:CDS
AAGACAAAGACAAAATTGAT+TGG	0.437683	1.2:-65267035	MS.gene21180:CDS
AGTAATGCAAGTTTCAATAC+AGG	0.442716	1.2:+65266378	None:intergenic
GGCTCATAGCACCATTCAAT+TGG	0.443758	1.2:+65266554	None:intergenic
TCAGTTGGTTAATGTTATGA+AGG	0.445036	1.2:-65267172	MS.gene21180:CDS
TGGGGTTGAAAGGGTTTATG+AGG	0.447556	1.2:-65267076	MS.gene21180:CDS
ATGAGTTAAGCAAGATTCTC+AGG	0.451952	1.2:-65266420	MS.gene21180:CDS
CATAATAAAATAGCTATGAT+TGG	0.458064	1.2:+65266810	None:intergenic
ATGACATTGGTGGGGTTGAA+AGG	0.462059	1.2:-65267086	MS.gene21180:CDS
TTGAGCCTCTATGGTGGTAC+TGG	0.464901	1.2:-65266889	MS.gene21180:CDS
TGGTATTCATCAAGTATTGA+AGG	0.467131	1.2:-65266338	MS.gene21180:CDS
TGACATTGGTGGGGTTGAAA+GGG	0.469956	1.2:-65267085	MS.gene21180:CDS
AATAACATTGTTTAAGGAGT+GGG	0.471012	1.2:-65266749	MS.gene21180:CDS
TGGTAACTTTCGCGTTGCAC+TGG	0.472277	1.2:+65266919	None:intergenic
TTCAATCACTCCTTTCACTT+TGG	0.474139	1.2:+65267401	None:intergenic
AGCTTGTTAATTATGATACA+AGG	0.497708	1.2:-65266720	MS.gene21180:CDS
GCTGCTATCTATATAAAAGC+TGG	0.505469	1.2:-65266994	MS.gene21180:CDS
ACTGCATCTGAATCATCTCT+TGG	0.510797	1.2:-65266358	MS.gene21180:CDS
CCTTAGAAGGCTTAATGATA+CGG	0.522341	1.2:-65266779	MS.gene21180:CDS
AATTATGATACAAGGTTGGC+TGG	0.523312	1.2:-65266712	MS.gene21180:CDS
TTGGAGATATGCCAATTGAA+TGG	0.531282	1.2:-65266565	MS.gene21180:CDS
AATTCCTGAATCCTAAAGAA+AGG	0.537404	1.2:+65266604	None:intergenic
TGTTAATTATGATACAAGGT+TGG	0.541417	1.2:-65266716	MS.gene21180:CDS
GTTACAAGTTCTCGTGTGCA+TGG	0.545024	1.2:+65266299	None:intergenic
CAGTTGGTTAATGTTATGAA+GGG	0.560663	1.2:-65267171	MS.gene21180:CDS
AGAAAAGCACTCACAACTTG+TGG	0.563214	1.2:+65266481	None:intergenic
GCAGCTTTGAATGACATTGG+TGG	0.569276	1.2:-65267096	MS.gene21180:CDS
AGCTTTGAATGACATTGGTG+GGG	0.572390	1.2:-65267094	MS.gene21180:CDS
CTTCTAAACTGTTACTGCAA+GGG	0.573008	1.2:-65267318	MS.gene21180:CDS
GCACTCACAACTTGTGGTGA+AGG	0.577944	1.2:+65266487	None:intergenic
TAATAACATTGTTTAAGGAG+TGG	0.580243	1.2:-65266750	MS.gene21180:CDS
TATCTTGTGTCCAAAGTGAA+AGG	0.580372	1.2:-65267411	MS.gene21180:CDS
TACGCTCAAGAAGGTCTCAC+CGG	0.582181	1.2:-65266836	MS.gene21180:CDS
GAAGCCGCACTTTCAGAAGT+CGG	0.583270	1.2:-65266526	MS.gene21180:CDS
TCTTCTAAACTGTTACTGCA+AGG	0.585829	1.2:-65267319	MS.gene21180:CDS
AATGGTTGCAGATAATGGAA+TGG	0.590967	1.2:-65267476	None:intergenic
AAGGCTCTTAAGCGGTGTAG+AGG	0.591462	1.2:-65266628	MS.gene21180:CDS
CTGAAAGTGCGGCTTCTAAG+TGG	0.596496	1.2:+65266533	None:intergenic
CATAGAGGCTCAACAAGTGA+TGG	0.603610	1.2:+65266899	None:intergenic
CGTATCATTAAGCCTTCTAA+GGG	0.604610	1.2:+65266780	None:intergenic
CATTACCAGTACCACCATAG+AGG	0.605854	1.2:+65266884	None:intergenic
TTCATAACATTAACCAACTG+AGG	0.615039	1.2:+65267174	None:intergenic
AAGGTTGGCTGGTGTTGCAG+TGG	0.615366	1.2:-65266701	MS.gene21180:CDS
TGTGCAGCTTTGAATGACAT+TGG	0.616404	1.2:-65267099	MS.gene21180:CDS
GCTCAGAACATGTACACATA+CGG	0.618377	1.2:-65267345	MS.gene21180:CDS
AGAAGGCTTAATGATACGGA+GGG	0.620270	1.2:-65266775	MS.gene21180:CDS
AAATAGCTATGATTGGTCAC+CGG	0.622313	1.2:+65266817	None:intergenic
AGTCTGGAGTACGCTCAAGA+AGG	0.623685	1.2:-65266845	MS.gene21180:CDS
TGCTTACTTGAGTCAAAACA+TGG	0.625673	1.2:-65266677	MS.gene21180:CDS
AGCTATGTCGATCTTTGAGA+AGG	0.634352	1.2:-65266647	MS.gene21180:CDS
AGTTGGTTAATGTTATGAAG+GGG	0.635275	1.2:-65267170	MS.gene21180:CDS
CACTTGTTGAGCCTCTATGG+TGG	0.635576	1.2:-65266895	MS.gene21180:CDS
TCACAACTTGTGGTGAAGGA+CGG	0.645990	1.2:+65266491	None:intergenic
GTGTACATGTTCTGAGCACG+AGG	0.648813	1.2:+65267351	None:intergenic
CAAGGGACTAATGCTAGACA+AGG	0.652550	1.2:-65267301	MS.gene21180:CDS
TAGAAGGCTTAATGATACGG+AGG	0.655243	1.2:-65266776	MS.gene21180:CDS
TCTTTGAGAAGGCTCTTAAG+CGG	0.664916	1.2:-65266636	MS.gene21180:CDS
ATCGCCGACTTCTGAAAGTG+CGG	0.674194	1.2:+65266522	None:intergenic
TACATGTTCTGAGCACGAGG+AGG	0.707918	1.2:+65267354	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	CATAATAAAATAGCTATGAT+TGG	+	chr1.2:65266955-65266974	None:intergenic	20.0%
!!!	AATTTGATGGTTTTGTATAT+GGG	-	chr1.2:65266543-65266562	MS.gene21180:CDS	20.0%
!	AAGACAAAGACAAAATTGAT+TGG	-	chr1.2:65266727-65266746	MS.gene21180:CDS	25.0%
!	AATAACATTGTTTAAGGAGT+GGG	-	chr1.2:65267013-65267032	MS.gene21180:CDS	25.0%
!	ATTGTTCATGCTGTATTTAT+TGG	-	chr1.2:65267178-65267197	MS.gene21180:CDS	25.0%
!	CATATACAAAACCATCAAAT+TGG	+	chr1.2:65266544-65266563	None:intergenic	25.0%
!	TAATAACATTGTTTAAGGAG+TGG	-	chr1.2:65267012-65267031	MS.gene21180:CDS	25.0%
!	TGTTAATTATGATACAAGGT+TGG	-	chr1.2:65267046-65267065	MS.gene21180:CDS	25.0%
!	TTTGATAAGATGGATGAATT+AGG	-	chr1.2:65266495-65266514	MS.gene21180:CDS	25.0%
!!	ATTGTCTCTTTTTGATAAGA+TGG	-	chr1.2:65266485-65266504	MS.gene21180:CDS	25.0%
!!!	AGCTTGTTAATTATGATACA+AGG	-	chr1.2:65267042-65267061	MS.gene21180:CDS	25.0%
!!!	ATTTGATGGTTTTGTATATG+GGG	-	chr1.2:65266544-65266563	MS.gene21180:CDS	25.0%
!!!	CAATTTGATGGTTTTGTATA+TGG	-	chr1.2:65266542-65266561	MS.gene21180:CDS	25.0%
	AATTCCTGAATCCTAAAGAA+AGG	+	chr1.2:65267161-65267180	None:intergenic	30.0%
	AGTAATGCAAGTTTCAATAC+AGG	+	chr1.2:65267387-65267406	None:intergenic	30.0%
	AGTTGGTTAATGTTATGAAG+GGG	-	chr1.2:65266592-65266611	MS.gene21180:CDS	30.0%
	CAGTTGGTTAATGTTATGAA+GGG	-	chr1.2:65266591-65266610	MS.gene21180:CDS	30.0%
	CTGAATTTACATACACTGTT+TGG	-	chr1.2:65266631-65266650	MS.gene21180:CDS	30.0%
	GAAAAAGAGACAGATCTTAA+TGG	-	chr1.2:65267314-65267333	MS.gene21180:CDS	30.0%
	GGGCATAATAACATTGTTTA+AGG	-	chr1.2:65267007-65267026	MS.gene21180:CDS	30.0%
	TCAGTTGGTTAATGTTATGA+AGG	-	chr1.2:65266590-65266609	MS.gene21180:CDS	30.0%
	TTAAACAGGTTTATAGAGTC+TGG	-	chr1.2:65266901-65266920	MS.gene21180:CDS	30.0%
	TTCATAACATTAACCAACTG+AGG	+	chr1.2:65266591-65266610	None:intergenic	30.0%
	TTTGTCTTTCACCAATTTGA+TGG	-	chr1.2:65266530-65266549	MS.gene21180:CDS	30.0%
!	CTTTTATATAGATAGCAGCA+AGG	+	chr1.2:65266767-65266786	None:intergenic	30.0%
!!	TGGTATTCATCAAGTATTGA+AGG	-	chr1.2:65267424-65267443	MS.gene21180:CDS	30.0%
	AATTATGATACAAGGTTGGC+TGG	-	chr1.2:65267050-65267069	MS.gene21180:CDS	35.0%
	ATGAGTTAAGCAAGATTCTC+AGG	-	chr1.2:65267342-65267361	MS.gene21180:CDS	35.0%
	CCTTAGAAGGCTTAATGATA+CGG	-	chr1.2:65266983-65267002	MS.gene21180:CDS	35.0%
	CGTATCATTAAGCCTTCTAA+GGG	+	chr1.2:65266985-65267004	None:intergenic	35.0%
	CTTCTAAACTGTTACTGCAA+GGG	-	chr1.2:65266444-65266463	MS.gene21180:CDS	35.0%
	GCTGCTATCTATATAAAAGC+TGG	-	chr1.2:65266768-65266787	MS.gene21180:CDS	35.0%
	TATCTTGTGTCCAAAGTGAA+AGG	-	chr1.2:65266351-65266370	MS.gene21180:CDS	35.0%
	TCTTCTAAACTGTTACTGCA+AGG	-	chr1.2:65266443-65266462	MS.gene21180:CDS	35.0%
	TGCTTACTTGAGTCAAAACA+TGG	-	chr1.2:65267085-65267104	MS.gene21180:CDS	35.0%
	TTATGCTTTCTACCCTTAGA+AGG	-	chr1.2:65266970-65266989	MS.gene21180:CDS	35.0%
	TTCAATCACTCCTTTCACTT+TGG	+	chr1.2:65266364-65266383	None:intergenic	35.0%
	TTGGAGATATGCCAATTGAA+TGG	-	chr1.2:65267197-65267216	MS.gene21180:CDS	35.0%
!	AAATAGCTATGATTGGTCAC+CGG	+	chr1.2:65266948-65266967	None:intergenic	35.0%
!	AACCAACTGAGGAACTTTTT+GGG	+	chr1.2:65266580-65266599	None:intergenic	35.0%
!	TAACCAACTGAGGAACTTTT+TGG	+	chr1.2:65266581-65266600	None:intergenic	35.0%
!!	AAGCTGAGTTGATGCTTAAA+AGG	-	chr1.2:65266802-65266821	MS.gene21180:CDS	35.0%
!!	TGGTACTGGTAATGTTAAAC+AGG	-	chr1.2:65266887-65266906	MS.gene21180:CDS	35.0%
	ACTGCATCTGAATCATCTCT+TGG	-	chr1.2:65267404-65267423	MS.gene21180:CDS	40.0%
	AGAAGGCTTAATGATACGGA+GGG	-	chr1.2:65266987-65267006	MS.gene21180:CDS	40.0%
	CCGTATCATTAAGCCTTCTA+AGG	+	chr1.2:65266986-65267005	None:intergenic	40.0%
	GCTCAGAACATGTACACATA+CGG	-	chr1.2:65266417-65266436	MS.gene21180:CDS	40.0%
	TAGAAGGCTTAATGATACGG+AGG	-	chr1.2:65266986-65267005	MS.gene21180:CDS	40.0%
!	ACCAACTGAGGAACTTTTTG+GGG	+	chr1.2:65266579-65266598	None:intergenic	40.0%
!	AGCTATGTCGATCTTTGAGA+AGG	-	chr1.2:65267115-65267134	MS.gene21180:CDS	40.0%
!	TCTTTGAGAAGGCTCTTAAG+CGG	-	chr1.2:65267126-65267145	MS.gene21180:CDS	40.0%
!!	AGAAAAGCACTCACAACTTG+TGG	+	chr1.2:65267284-65267303	None:intergenic	40.0%
!!	AGCTTTGAATGACATTGGTG+GGG	-	chr1.2:65266668-65266687	MS.gene21180:CDS	40.0%
!!	AGGACCTTTCTTTAGGATTC+AGG	-	chr1.2:65267154-65267173	MS.gene21180:CDS	40.0%
!!	CAGCTTTGAATGACATTGGT+GGG	-	chr1.2:65266667-65266686	MS.gene21180:CDS	40.0%
!!	TGTGCAGCTTTGAATGACAT+TGG	-	chr1.2:65266663-65266682	MS.gene21180:CDS	40.0%
!!!	ATGGTTTTGTATATGGGGCT+AGG	-	chr1.2:65266549-65266568	MS.gene21180:CDS	40.0%
	ACCCCAAAAAGTTCCTCAGT+TGG	-	chr1.2:65266575-65266594	MS.gene21180:CDS	45.0%
	ATGACATTGGTGGGGTTGAA+AGG	-	chr1.2:65266676-65266695	MS.gene21180:CDS	45.0%
	CAAGGGACTAATGCTAGACA+AGG	-	chr1.2:65266461-65266480	MS.gene21180:CDS	45.0%
	CATAGAGGCTCAACAAGTGA+TGG	+	chr1.2:65266866-65266885	None:intergenic	45.0%
	CATTACCAGTACCACCATAG+AGG	+	chr1.2:65266881-65266900	None:intergenic	45.0%
	GGCTCATAGCACCATTCAAT+TGG	+	chr1.2:65267211-65267230	None:intergenic	45.0%
	GGTGTAGAGGACCTTTCTTT+AGG	-	chr1.2:65267147-65267166	MS.gene21180:CDS	45.0%
	TCACAACTTGTGGTGAAGGA+CGG	+	chr1.2:65267274-65267293	None:intergenic	45.0%
	TGACATTGGTGGGGTTGAAA+GGG	-	chr1.2:65266677-65266696	MS.gene21180:CDS	45.0%
	TGGGGTTGAAAGGGTTTATG+AGG	-	chr1.2:65266686-65266705	MS.gene21180:CDS	45.0%
!	CATCACTTGTTGAGCCTCTA+TGG	-	chr1.2:65266864-65266883	MS.gene21180:CDS	45.0%
!!	GCAGCTTTGAATGACATTGG+TGG	-	chr1.2:65266666-65266685	MS.gene21180:CDS	45.0%
	AAGGCTCTTAAGCGGTGTAG+AGG	-	chr1.2:65267134-65267153	MS.gene21180:CDS	50.0%
	GAAGCCGCACTTTCAGAAGT+CGG	-	chr1.2:65267236-65267255	MS.gene21180:CDS	50.0%
	GCACTCACAACTTGTGGTGA+AGG	+	chr1.2:65267278-65267297	None:intergenic	50.0%
	TACGCTCAAGAAGGTCTCAC+CGG	-	chr1.2:65266926-65266945	MS.gene21180:CDS	50.0%
	TGGTAACTTTCGCGTTGCAC+TGG	+	chr1.2:65266846-65266865	None:intergenic	50.0%
	TTGAGCCTCTATGGTGGTAC+TGG	-	chr1.2:65266873-65266892	MS.gene21180:CDS	50.0%
!	AGTCTGGAGTACGCTCAAGA+AGG	-	chr1.2:65266917-65266936	MS.gene21180:CDS	50.0%
!	CACTTGTTGAGCCTCTATGG+TGG	-	chr1.2:65266867-65266886	MS.gene21180:CDS	50.0%
!	CTGAAAGTGCGGCTTCTAAG+TGG	+	chr1.2:65267232-65267251	None:intergenic	50.0%
!	GTGTACATGTTCTGAGCACG+AGG	+	chr1.2:65266414-65266433	None:intergenic	50.0%
!	TACATGTTCTGAGCACGAGG+AGG	+	chr1.2:65266411-65266430	None:intergenic	50.0%
!!	ATCGCCGACTTCTGAAAGTG+CGG	+	chr1.2:65267243-65267262	None:intergenic	50.0%
!!	AAGGTTGGCTGGTGTTGCAG+TGG	-	chr1.2:65267061-65267080	MS.gene21180:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	65266300	65267484	65266300	ID=MS.gene21180
chr1.2	mRNA	65266300	65267484	65266300	ID=MS.gene21180.t1;Parent=MS.gene21180
chr1.2	exon	65266300	65267484	65266300	ID=MS.gene21180.t1.exon1;Parent=MS.gene21180.t1
chr1.2	CDS	65266300	65267484	65266300	ID=cds.MS.gene21180.t1;Parent=MS.gene21180.t1

Gene Sequence

>MS.gene21180

ATGGAATGGATGAAGATGAAAAACATTTGTTTTTCATATGCTGTGTATGTATATCTTGTGTCCAAAGTGAAAGGAGTGATTGAAGCTGAGAATCGCTTCAACACTTTTCCTCCTCGTGCTCAGAACATGTACACATACGGTTCTCTTCTAAACTGTTACTGCAAGGGACTAATGCTAGACAAGGCATTGTCTCTTTTTGATAAGATGGATGAATTAGGCTATCTGACTAGTTTGTCTTTCACCAATTTGATGGTTTTGTATATGGGGCTAGGTCAACCCCAAAAAGTTCCTCAGTTGGTTAATGTTATGAAGGGGAAGAAAATTCGTATGACTGAATTTACATACACTGTTTGGATGAATAGTTGTGCAGCTTTGAATGACATTGGTGGGGTTGAAAGGGTTTATGAGGAGATGAAAAGAGAAGACGAAGACAAAGACAAAATTGATTGGAAGACTTATAGCAACCTTGCTGCTATCTATATAAAAGCTGGATTTTTTGAGAAAGCTGAGTTGATGCTTAAAAGGTTAGAAGAAATAGTGAAGCCAGTGCAACGCGAAAGTTACCATCACTTGTTGAGCCTCTATGGTGGTACTGGTAATGTTAAACAGGTTTATAGAGTCTGGAGTACGCTCAAGAAGGTCTCACCGGTGACCAATCATAGCTATTTTATTATGCTTTCTACCCTTAGAAGGCTTAATGATACGGAGGGCATAATAACATTGTTTAAGGAGTGGGAATCTAAGCTTGTTAATTATGATACAAGGTTGGCTGGTGTTGCAGTGGATGCTTACTTGAGTCAAAACATGGACGATGAAGCTATGTCGATCTTTGAGAAGGCTCTTAAGCGGTGTAGAGGACCTTTCTTTAGGATTCAGGAATTGTTCATGCTGTATTTATTGGAGATATGCCAATTGAATGGTGCTATGAGCCACTTAGAAGCCGCACTTTCAGAAGTCGGCGATTATAAATACCGTCCTTCACCACAAGTTGTGAGTGCTTTTCTAAAGTATTATGAAAAAGAGACAGATCTTAATGGTGTTGATGAGTTAAGCAAGATTCTCAGGAGTCACAATTTTGATGAATCCTGTATTGAAACTTGCATTACTGCATCTGAATCATCTCTTGGTATTCATCAAGTATTGAAGGAAGATTCTGATGTTAACCATGCACACGAGAACTTGTAA

Protein sequence

>MS.gene21180.t1

MEWMKMKNICFSYAVYVYLVSKVKGVIEAENRFNTFPPRAQNMYTYGSLLNCYCKGLMLDKALSLFDKMDELGYLTSLSFTNLMVLYMGLGQPQKVPQLVNVMKGKKIRMTEFTYTVWMNSCAALNDIGGVERVYEEMKREDEDKDKIDWKTYSNLAAIYIKAGFFEKAELMLKRLEEIVKPVQRESYHHLLSLYGGTGNVKQVYRVWSTLKKVSPVTNHSYFIMLSTLRRLNDTEGIITLFKEWESKLVNYDTRLAGVAVDAYLSQNMDDEAMSIFEKALKRCRGPFFRIQELFMLYLLEICQLNGAMSHLEAALSEVGDYKYRPSPQVVSAFLKYYEKETDLNGVDELSKILRSHNFDESCIETCITASESSLGIHQVLKEDSDVNHAHENL