AlfalfaGEDB | MS.gene21604

M. sativa cultivar XinJiangDaYe / MS.gene21604

KEGG: -
GO: -
PFAM: PF13639.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21604.t1	XP_003591673.1	94.1	153	8	1	3	154	4	156	7.90E-78	299.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21604.t1	Q9FG21	53.8	80	32	1	79	153	98	177	1.9e-19	97.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21604.t1	G7ZYD4	94.1	153	8	1	3	154	4	156	5.7e-78	299.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049549	MS.gene21604	0.80241	5.69E-49	-1.69E-46
MS.gene052211	MS.gene21604	0.806091	9.73E-50	-1.69E-46
MS.gene05244	MS.gene21604	0.804952	1.69E-49	-1.69E-46
MS.gene054421	MS.gene21604	0.821328	4.28E-53	-1.69E-46
MS.gene054742	MS.gene21604	0.808025	3.79E-50	-1.69E-46
MS.gene056590	MS.gene21604	0.806192	9.27E-50	-1.69E-46
MS.gene056591	MS.gene21604	0.808267	3.37E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21604.t1	MTR_1g090450	94.118	153	8	1	3	154	4	156	8.63e-99	281
MS.gene21604.t1	MTR_1g056350	51.163	86	38	2	69	153	69	151	2.67e-26	97.8
MS.gene21604.t1	MTR_1g090480	36.025	161	86	6	1	154	1	151	6.51e-25	94.4
MS.gene21604.t1	MTR_3g012550	29.299	157	98	4	7	153	3	156	2.70e-19	80.1
MS.gene21604.t1	MTR_1g090460	50.000	70	33	1	80	147	68	137	3.16e-19	79.3
MS.gene21604.t1	MTR_5g064990	33.333	150	88	6	10	154	50	192	9.72e-19	81.6
MS.gene21604.t1	MTR_1g090440	73.171	41	11	0	109	149	120	160	1.20e-18	78.2
MS.gene21604.t1	MTR_7g076250	38.017	121	60	5	32	147	22	132	1.39e-18	78.6
MS.gene21604.t1	MTR_3g094000	32.886	149	85	6	5	149	26	163	2.27e-18	77.4
MS.gene21604.t1	MTR_6g087150	36.000	125	68	4	25	147	47	161	3.45e-18	80.1
MS.gene21604.t1	MTR_7g079280	40.541	74	44	0	80	153	83	156	9.63e-18	75.9
MS.gene21604.t1	MTR_1g492830	31.746	126	84	2	25	149	8	132	1.46e-17	76.6
MS.gene21604.t1	MTR_3g110190	34.646	127	69	4	25	147	18	134	2.56e-17	77.4
MS.gene21604.t1	MTR_2g090905	46.154	65	31	1	87	147	49	113	2.88e-17	73.6
MS.gene21604.t1	MTR_3g099650	35.156	128	67	6	25	147	62	178	6.36e-17	76.6
MS.gene21604.t1	MTR_5g024730	30.714	140	83	4	10	148	22	148	9.21e-17	74.3
MS.gene21604.t1	MTR_6g055030	47.619	63	32	1	86	147	106	168	1.36e-16	75.1
MS.gene21604.t1	MTR_8g028465	29.252	147	86	3	21	153	20	162	2.11e-16	73.2
MS.gene21604.t1	MTR_8g063660	31.655	139	84	5	20	149	2	138	2.51e-16	74.7
MS.gene21604.t1	MTR_2g090950	43.662	71	36	1	81	147	95	165	2.72e-16	73.6
MS.gene21604.t1	MTR_7g113800	30.667	150	86	7	2	147	27	162	2.91e-16	74.7
MS.gene21604.t1	MTR_7g073200	32.026	153	91	5	2	153	15	155	4.09e-16	71.6
MS.gene21604.t1	MTR_5g026730	29.452	146	91	5	12	153	5	142	4.29e-16	71.6
MS.gene21604.t1	MTR_1g082550	32.800	125	75	4	25	147	52	169	4.94e-16	73.9
MS.gene21604.t1	MTR_1g100737	42.647	68	36	1	83	147	98	165	5.26e-16	71.6
MS.gene21604.t1	MTR_8g032690	45.161	62	32	1	86	147	2	61	6.91e-16	69.3
MS.gene21604.t1	MTR_8g092985	29.221	154	99	3	1	153	42	186	7.51e-16	71.6
MS.gene21604.t1	MTR_5g009200	30.952	126	82	2	24	147	270	392	1.12e-15	73.2
MS.gene21604.t1	MTR_8g073120	28.472	144	89	4	5	147	10	140	1.16e-15	71.2
MS.gene21604.t1	MTR_5g064980	41.791	67	36	2	83	147	114	179	1.87e-15	72.4
MS.gene21604.t1	MTR_2g096350	37.647	85	44	2	66	147	99	177	2.03e-15	70.9
MS.gene21604.t1	MTR_2g044570	44.928	69	35	2	87	153	64	131	2.33e-15	71.6
MS.gene21604.t1	MTR_8g099515	31.452	124	78	2	26	149	265	381	2.51e-15	72.0
MS.gene21604.t1	MTR_3g100400	52.000	50	24	0	98	147	149	198	4.33e-15	71.6
MS.gene21604.t1	MTR_5g009210	28.667	150	96	4	3	147	214	357	6.68e-15	70.9
MS.gene21604.t1	MTR_3g095560	32.237	152	81	6	5	148	42	179	7.06e-15	69.7
MS.gene21604.t1	MTR_5g034790	28.986	138	83	5	25	149	51	186	1.08e-14	70.1
MS.gene21604.t1	MTR_6g007680	33.333	123	61	3	25	147	7	108	1.40e-14	67.0
MS.gene21604.t1	MTR_8g071815	32.374	139	81	5	17	153	11	138	2.01e-14	67.4
MS.gene21604.t1	MTR_3g086700	29.839	124	73	4	26	147	6	117	2.07e-14	67.4
MS.gene21604.t1	MTR_7g079290	52.000	50	24	0	105	154	155	204	2.59e-14	67.8
MS.gene21604.t1	MTR_5g009190	29.134	127	85	2	23	147	213	336	2.80e-14	68.9
MS.gene21604.t1	MTR_8g066780	28.777	139	89	4	22	153	55	190	2.81e-14	68.9
MS.gene21604.t1	MTR_5g066250	34.524	84	46	2	64	147	128	202	3.31e-14	68.9
MS.gene21604.t1	MTR_5g076990	28.676	136	77	3	21	147	24	148	3.37e-14	68.6
MS.gene21604.t1	MTR_4g030070	42.254	71	38	1	84	154	92	159	3.72e-14	67.4
MS.gene21604.t1	MTR_4g063070	24.812	133	88	2	24	147	249	378	4.06e-14	68.6
MS.gene21604.t1	MTR_3g086730	42.857	63	33	2	87	147	56	117	4.54e-14	67.4
MS.gene21604.t1	MTR_6g055030	51.852	54	25	1	95	147	84	137	4.96e-14	67.8
MS.gene21604.t1	MTR_8g066740	40.000	70	40	1	80	147	79	148	6.04e-14	67.8
MS.gene21604.t1	MTR_5g064890	28.571	168	92	6	2	147	35	196	6.92e-14	67.8
MS.gene21604.t1	MTR_3g071300	27.465	142	90	4	13	149	17	150	7.15e-14	65.9
MS.gene21604.t1	MTR_8g089880	39.655	58	35	0	90	147	138	195	7.24e-14	67.4
MS.gene21604.t1	MTR_5g022920	38.710	62	38	0	87	148	171	232	7.81e-14	66.6
MS.gene21604.t1	MTR_5g026720	48.000	50	26	0	104	153	92	141	1.30e-13	64.7
MS.gene21604.t1	MTR_6g007737	40.580	69	38	2	80	147	135	201	1.38e-13	67.0
MS.gene21604.t1	MTR_8g009190	40.278	72	42	1	83	153	82	153	1.78e-13	66.6
MS.gene21604.t1	MTR_4g129420	48.980	49	25	0	103	151	142	190	2.86e-13	66.2
MS.gene21604.t1	MTR_8g099495	39.394	66	40	0	82	147	324	389	3.64e-13	65.9
MS.gene21604.t1	MTR_7g117350	31.579	133	79	4	25	153	246	370	3.70e-13	65.9
MS.gene21604.t1	MTR_5g092790	48.837	43	22	0	105	147	185	227	3.80e-13	64.7
MS.gene21604.t1	MTR_7g117350	31.579	133	79	4	25	153	238	362	3.93e-13	65.9
MS.gene21604.t1	MTR_7g096690	25.191	131	86	3	25	149	20	144	5.18e-13	65.5
MS.gene21604.t1	MTR_5g092750	48.837	43	22	0	105	147	185	227	5.37e-13	64.3
MS.gene21604.t1	MTR_3g464780	37.209	86	51	2	67	149	91	176	5.57e-13	64.7
MS.gene21604.t1	MTR_8g092970	41.176	68	39	1	86	153	113	179	5.78e-13	63.9
MS.gene21604.t1	MTR_2g035800	51.111	45	22	0	104	148	101	145	5.82e-13	63.2
MS.gene21604.t1	MTR_2g055790	47.917	48	25	0	100	147	95	142	5.90e-13	63.5
MS.gene21604.t1	MTR_8g092990	41.176	68	39	1	86	153	123	189	6.03e-13	64.3
MS.gene21604.t1	MTR_8g074900	44.000	50	28	0	99	148	174	223	6.28e-13	64.3
MS.gene21604.t1	MTR_1g043410	36.508	63	38	1	89	149	105	167	7.89e-13	64.7
MS.gene21604.t1	MTR_5g030010	39.655	58	35	0	95	152	138	195	8.36e-13	65.1
MS.gene21604.t1	MTR_8g092930	38.889	72	43	1	82	153	117	187	8.63e-13	63.9
MS.gene21604.t1	MTR_5g082940	35.294	68	44	0	82	149	80	147	1.31e-12	62.4
MS.gene21604.t1	MTR_3g078120	36.923	65	41	0	83	147	63	127	1.40e-12	62.0
MS.gene21604.t1	MTR_6g007670	39.744	78	44	2	70	147	1	75	1.65e-12	63.2
MS.gene21604.t1	MTR_6g007670	41.667	72	41	1	76	147	144	214	1.29e-11	60.8
MS.gene21604.t1	MTR_2g009310	47.826	46	24	0	102	147	158	203	1.77e-12	63.9
MS.gene21604.t1	MTR_7g117540	43.137	51	29	0	103	153	99	149	1.82e-12	63.5
MS.gene21604.t1	MTR_1g074190	38.462	52	32	0	98	149	124	175	1.87e-12	63.9
MS.gene21604.t1	MTR_3g078450	34.921	63	41	0	85	147	84	146	1.93e-12	62.8
MS.gene21604.t1	MTR_8g027745	32.432	74	50	0	80	153	289	362	2.25e-12	63.5
MS.gene21604.t1	MTR_8g093010	26.797	153	97	4	2	153	44	182	2.50e-12	62.4
MS.gene21604.t1	MTR_4g120270	39.216	51	31	0	97	147	96	146	2.65e-12	63.2
MS.gene21604.t1	MTR_3g116000	52.273	44	21	0	105	148	104	147	3.35e-12	61.6
MS.gene21604.t1	MTR_7g116200	39.344	61	34	1	87	147	78	135	3.67e-12	61.2
MS.gene21604.t1	MTR_8g092960	26.316	152	93	3	12	153	36	178	4.16e-12	61.6
MS.gene21604.t1	MTR_3g091200	35.294	68	44	0	82	149	308	375	5.27e-12	62.8
MS.gene21604.t1	MTR_4g093830	51.163	43	21	0	105	147	152	194	5.69e-12	62.4
MS.gene21604.t1	MTR_1g070140	44.444	45	25	0	105	149	130	174	6.14e-12	62.4
MS.gene21604.t1	MTR_2g041200	31.298	131	74	5	24	147	30	151	7.09e-12	60.5
MS.gene21604.t1	MTR_4g094725	51.163	43	21	0	105	147	106	148	8.00e-12	59.7
MS.gene21604.t1	MTR_8g092840	29.710	138	90	5	17	153	57	188	8.98e-12	60.8
MS.gene21604.t1	MTR_1g066430	42.188	64	34	1	88	151	637	697	1.41e-11	61.6
MS.gene21604.t1	MTR_4g106680	42.105	57	33	0	98	154	125	181	1.43e-11	61.2
MS.gene21604.t1	MTR_7g116210	38.983	59	33	1	89	147	22	77	1.71e-11	58.2
MS.gene21604.t1	MTR_8g023400	47.826	46	24	0	102	147	114	159	2.02e-11	60.8
MS.gene21604.t1	MTR_3g078470	36.066	61	39	0	87	147	86	146	2.90e-11	59.7
MS.gene21604.t1	MTR_5g071930	32.558	86	53	1	62	147	51	131	4.56e-11	58.5
MS.gene21604.t1	MTR_4g108830	37.143	70	44	0	79	148	120	189	5.24e-11	58.5
MS.gene21604.t1	MTR_2g436100	37.931	58	36	0	90	147	104	161	5.34e-11	59.3
MS.gene21604.t1	MTR_7g108855	30.120	83	56	1	67	147	54	136	6.34e-11	58.2
MS.gene21604.t1	MTR_4g108830	37.143	70	44	0	79	148	148	217	6.48e-11	58.5
MS.gene21604.t1	MTR_8g072020	41.538	65	35	3	84	147	425	487	9.82e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene21604.t1	AT5G06490	34.463	177	87	6	5	153	2	177	6.57e-25	95.1
MS.gene21604.t1	AT2G35910	51.351	74	34	1	80	153	124	195	1.08e-22	89.7
MS.gene21604.t1	AT4G10160	33.094	139	85	3	11	149	11	141	2.60e-19	81.3
MS.gene21604.t1	AT5G53110	34.146	123	75	2	27	149	258	374	2.27e-18	80.9
MS.gene21604.t1	AT2G46493	27.200	125	89	1	25	149	60	182	3.13e-18	77.4
MS.gene21604.t1	AT1G23980	31.343	134	79	4	25	147	55	186	1.58e-17	78.2
MS.gene21604.t1	AT2G46160	43.243	74	36	1	86	153	113	186	5.79e-17	74.7
MS.gene21604.t1	AT2G46160	43.243	74	36	1	86	153	113	186	5.79e-17	74.7
MS.gene21604.t1	AT1G76410	29.730	148	89	4	2	148	14	147	7.58e-17	73.9
MS.gene21604.t1	AT4G28890	32.215	149	85	5	10	147	22	165	1.06e-16	76.3
MS.gene21604.t1	AT1G28040	29.457	129	83	2	26	149	172	297	1.66e-16	74.7
MS.gene21604.t1	AT2G35000	30.709	127	79	2	22	147	59	177	4.00e-16	74.3
MS.gene21604.t1	AT4G10150	33.835	133	72	6	24	149	32	155	4.82e-16	72.8
MS.gene21604.t1	AT1G20823	31.333	150	92	6	4	148	11	154	5.07e-16	72.0
MS.gene21604.t1	AT2G25410	30.070	143	87	4	14	147	231	369	9.40e-16	73.2
MS.gene21604.t1	AT3G61550	47.368	57	30	0	97	153	128	184	9.45e-16	71.6
MS.gene21604.t1	AT4G40070	31.081	148	90	4	10	154	35	173	1.09e-15	72.8
MS.gene21604.t1	AT2G34990	26.923	130	93	2	19	147	10	138	1.23e-15	72.4
MS.gene21604.t1	AT5G27420	38.372	86	47	3	64	147	85	166	1.52e-15	72.8
MS.gene21604.t1	AT2G34990	26.923	130	93	2	19	147	32	160	1.53e-15	72.4
MS.gene21604.t1	AT3G05200	45.455	66	33	2	84	147	106	170	2.03e-15	72.4
MS.gene21604.t1	AT1G35330	43.939	66	34	2	86	149	109	173	2.24e-15	72.0
MS.gene21604.t1	AT2G20030	31.343	134	71	6	23	147	45	166	3.62e-15	71.6
MS.gene21604.t1	AT5G05280	54.000	50	23	0	102	151	110	159	4.53e-15	68.9
MS.gene21604.t1	AT5G07040	29.197	137	87	4	21	153	12	142	8.10e-15	67.8
MS.gene21604.t1	AT1G72200	40.000	65	38	1	84	147	122	186	1.55e-14	70.1
MS.gene21604.t1	AT1G04360	30.597	134	78	3	25	149	51	178	1.72e-14	69.7
MS.gene21604.t1	AT4G17905	46.032	63	31	1	88	147	161	223	1.82e-14	69.7
MS.gene21604.t1	AT4G17905	46.032	63	31	1	88	147	135	197	1.97e-14	69.3
MS.gene21604.t1	AT4G09120	34.940	83	51	2	67	147	84	165	1.98e-14	69.3
MS.gene21604.t1	AT3G48030	32.283	127	79	4	26	149	51	173	2.24e-14	68.6
MS.gene21604.t1	AT3G03550	43.077	65	37	0	90	154	144	208	2.62e-14	69.3
MS.gene21604.t1	AT1G72310	39.773	88	43	3	67	152	95	174	2.92e-14	68.9
MS.gene21604.t1	AT3G48030	39.130	69	41	1	81	149	184	251	3.39e-14	68.9
MS.gene21604.t1	AT5G05810	49.020	51	26	0	97	147	138	188	3.90e-14	68.9
MS.gene21604.t1	AT2G46494	29.688	128	75	3	33	149	237	360	4.78e-14	68.6
MS.gene21604.t1	AT3G62690	43.284	67	36	1	81	147	91	155	6.51e-14	67.4
MS.gene21604.t1	AT2G47560	44.262	61	34	0	87	147	90	150	6.68e-14	67.0
MS.gene21604.t1	AT3G10910	50.000	50	25	0	102	151	111	160	7.01e-14	65.9
MS.gene21604.t1	AT4G09130	39.706	68	34	2	84	147	98	162	7.02e-14	68.2
MS.gene21604.t1	AT4G33565	45.283	53	29	0	95	147	207	259	7.76e-14	67.8
MS.gene21604.t1	AT4G09110	32.394	142	83	6	8	147	35	165	8.37e-14	67.4
MS.gene21604.t1	AT2G18650	48.077	52	27	0	101	152	122	173	8.67e-14	67.8
MS.gene21604.t1	AT5G17600	43.103	58	33	0	90	147	127	184	1.49e-13	67.0
MS.gene21604.t1	AT3G18773	31.333	150	90	6	1	147	33	172	1.67e-13	65.5
MS.gene21604.t1	AT5G01880	46.939	49	26	0	101	149	101	149	1.73e-13	64.3
MS.gene21604.t1	AT1G22500	32.283	127	79	5	23	147	39	160	1.94e-13	66.6
MS.gene21604.t1	AT5G66070	35.802	81	45	2	68	148	146	219	2.26e-13	65.5
MS.gene21604.t1	AT5G66070	35.802	81	45	2	68	148	146	219	2.26e-13	65.5
MS.gene21604.t1	AT5G66070	35.802	81	45	2	68	148	170	243	2.46e-13	65.5
MS.gene21604.t1	AT2G46495	28.378	148	87	6	11	149	227	364	2.47e-13	66.6
MS.gene21604.t1	AT5G57750	30.000	130	77	3	27	147	40	164	2.51e-13	65.1
MS.gene21604.t1	AT4G35480	30.000	150	96	4	6	148	9	156	2.53e-13	64.7
MS.gene21604.t1	AT4G30400	51.111	45	22	0	103	147	132	176	2.57e-13	66.6
MS.gene21604.t1	AT2G42360	51.020	49	24	0	99	147	102	150	2.99e-13	65.1
MS.gene21604.t1	AT3G16720	51.111	45	22	0	103	147	117	161	3.56e-13	65.9
MS.gene21604.t1	AT3G20395	53.191	47	22	0	101	147	167	213	3.68e-13	64.7
MS.gene21604.t1	AT2G42350	48.980	49	25	0	105	153	100	148	3.73e-13	64.7
MS.gene21604.t1	AT2G17450	30.070	143	85	4	10	148	14	145	4.04e-13	63.9
MS.gene21604.t1	AT5G10380	46.000	50	27	0	102	151	132	181	4.06e-13	65.5
MS.gene21604.t1	AT2G27940	40.299	67	37	1	87	153	125	188	4.11e-13	64.7
MS.gene21604.t1	AT4G09100	35.211	71	45	1	82	151	61	131	4.69e-13	62.8
MS.gene21604.t1	AT4G35840	29.457	129	81	3	30	148	106	234	4.98e-13	64.7
MS.gene21604.t1	AT1G33480	53.488	43	20	0	105	147	100	142	5.48e-13	64.7
MS.gene21604.t1	AT5G36001	38.462	65	36	1	89	149	244	308	8.39e-13	64.7
MS.gene21604.t1	AT1G74410	51.111	45	22	0	105	149	176	220	9.09e-13	63.5
MS.gene21604.t1	AT1G71980	43.056	72	38	3	84	154	212	281	1.18e-12	64.7
MS.gene21604.t1	AT1G72220	48.837	43	22	0	105	147	177	219	1.22e-12	64.7
MS.gene21604.t1	AT1G49210	32.117	137	83	5	12	147	50	177	1.29e-12	63.2
MS.gene21604.t1	AT2G17730	35.526	76	48	1	74	148	164	239	1.46e-12	63.5
MS.gene21604.t1	AT4G15975	45.652	46	25	0	102	147	73	118	1.66e-12	63.2
MS.gene21604.t1	AT1G49220	32.117	137	83	5	12	147	50	177	1.78e-12	63.2
MS.gene21604.t1	AT2G44578	53.488	43	20	0	105	147	70	112	2.19e-12	61.2
MS.gene21604.t1	AT1G35630	32.800	125	67	6	29	148	164	276	2.34e-12	63.5
MS.gene21604.t1	AT3G14320	48.936	47	24	0	102	148	85	131	2.36e-12	62.4
MS.gene21604.t1	AT1G53820	45.833	48	26	0	102	149	117	164	2.42e-12	63.5
MS.gene21604.t1	AT5G40250	51.111	45	22	0	103	147	141	185	3.03e-12	63.5
MS.gene21604.t1	AT1G49200	31.655	139	81	6	12	147	51	178	3.75e-12	62.0
MS.gene21604.t1	AT3G18930	33.735	83	47	1	80	154	123	205	3.90e-12	63.2
MS.gene21604.t1	AT3G18930	33.735	83	47	1	80	154	123	205	3.90e-12	63.2
MS.gene21604.t1	AT3G18930	33.735	83	47	1	80	154	123	205	3.90e-12	63.2
MS.gene21604.t1	AT1G49230	31.159	138	78	6	14	147	49	173	3.94e-12	62.0
MS.gene21604.t1	AT5G58580	53.061	49	23	0	105	153	138	186	5.49e-12	62.4
MS.gene21604.t1	AT3G60220	37.500	72	44	1	83	153	94	165	6.20e-12	62.4
MS.gene21604.t1	AT1G35625	36.364	77	46	3	73	148	202	276	7.70e-12	62.0
MS.gene21604.t1	AT5G43420	43.182	44	25	0	104	147	137	180	7.90e-12	62.4
MS.gene21604.t1	AT2G46495	37.313	67	41	1	84	149	270	336	9.43e-12	62.0
MS.gene21604.t1	AT1G32361	37.313	67	38	2	83	149	136	198	9.75e-12	62.0
MS.gene21604.t1	AT2G35420	40.323	62	35	1	86	147	86	145	9.89e-12	61.2
MS.gene21604.t1	AT1G80400	31.469	143	72	6	30	154	273	407	1.14e-11	61.6
MS.gene21604.t1	AT5G37270	40.278	72	38	2	82	148	127	198	1.86e-11	60.1
MS.gene21604.t1	AT5G37250	40.278	72	38	2	82	148	111	182	1.92e-11	59.7
MS.gene21604.t1	AT5G37250	40.278	72	38	2	82	148	127	198	1.98e-11	59.7
MS.gene21604.t1	AT4G38140	45.283	53	28	1	103	154	60	112	2.31e-11	58.5
MS.gene21604.t1	AT1G22670	50.000	56	26	2	96	150	223	277	2.41e-11	60.8
MS.gene21604.t1	AT3G55530	31.522	92	60	2	58	147	162	252	2.72e-11	60.1
MS.gene21604.t1	AT1G53010	37.037	81	45	2	72	148	95	173	3.92e-11	58.5
MS.gene21604.t1	AT5G37230	38.889	72	39	2	82	148	127	198	4.06e-11	58.9
MS.gene21604.t1	AT3G11110	51.163	43	21	0	107	149	109	151	8.77e-11	57.4
MS.gene21604.t1	AT4G26400	45.833	48	25	1	100	147	236	282	9.20e-11	58.9
MS.gene21604.t1	AT4G26400	45.833	48	25	1	100	147	236	282	9.20e-11	58.9
MS.gene21604.t1	AT4G17920	28.889	135	80	4	22	148	27	153	9.95e-11	58.9

Find 23 sgRNAs with CRISPR-Local

Find 29 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATATCTTAATACTTGTATT+TGG	0.241998	1.3:-63219057	MS.gene21604:CDS
TGTATTTGGTCTCGTATTCT+TGG	0.251746	1.3:-63219043	MS.gene21604:CDS
TCTGAGAGTATAAAAGTTTC+GGG	0.311980	1.3:+63218869	None:intergenic
ATCTGAGAGTATAAAAGTTT+CGG	0.329103	1.3:+63218868	None:intergenic
ATTAGTTGCTCTATTTGCTT+AGG	0.404219	1.3:-63218820	MS.gene21604:CDS
TACTCTCAGATTCAGAAGAA+TGG	0.427690	1.3:-63218856	MS.gene21604:CDS
ATGACGATGTGGTGGAAAAC+CGG	0.430831	1.3:+63218951	None:intergenic
TGATAAAGATGACCACAATC+TGG	0.456707	1.3:+63218763	None:intergenic
ATGTTGCTTGTGTTGATCCA+TGG	0.521110	1.3:-63218741	MS.gene21604:CDS
TTGAGGTTACTTCCAGATTG+TGG	0.535101	1.3:-63218775	MS.gene21604:CDS
TCGTCATGAAGACTCAATCA+TGG	0.545902	1.3:-63218935	MS.gene21604:CDS
ATAAAGAAAGTGACATGTTG+AGG	0.576166	1.3:-63218792	MS.gene21604:CDS
TCAAAACCGTTGTTGTTGTG+TGG	0.584708	1.3:+63219096	None:intergenic
GTGGAATGTAACATGAGCCA+TGG	0.599564	1.3:+63218724	None:intergenic
AAACCGTTGTTGTTGTGTGG+AGG	0.603017	1.3:+63219099	None:intergenic
GTTGTTGTGTGGAGGTTCCG+AGG	0.639516	1.3:+63219107	None:intergenic
GTATCCTTCAAAACTTGTGT+CGG	0.641573	1.3:+63218891	None:intergenic
GAGTCTTCATGACGATGTGG+TGG	0.660756	1.3:+63218943	None:intergenic
GAGCAACAACAACGGCACCT+CGG	0.664145	1.3:-63219124	MS.gene21604:CDS
GAAGACTCAATCATGGAACA+AGG	0.664922	1.3:-63218928	MS.gene21604:CDS
GAACCTCCACACAACAACAA+CGG	0.709301	1.3:-63219102	MS.gene21604:CDS
ATTGAGTCTTCATGACGATG+TGG	0.716521	1.3:+63218940	None:intergenic
AAGAAGATGAGCAACAACAA+CGG	0.717539	1.3:-63219132	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATATCTTAATACTTGTATT+TGG	-	chr1.3:63218753-63218772	MS.gene21604:CDS	15.0%
!!	AACATTCTCAATATTTTGTC+CGG	-	chr1.3:63218840-63218859	MS.gene21604:CDS	25.0%
!!	AGTGATGATTTTCTACATAT+GGG	+	chr1.3:63219116-63219135	None:intergenic	25.0%
!!	ATCTGAGAGTATAAAAGTTT+CGG	+	chr1.3:63218945-63218964	None:intergenic	25.0%
!!	TAGTGATGATTTTCTACATA+TGG	+	chr1.3:63219117-63219136	None:intergenic	25.0%
	ATAAAGAAAGTGACATGTTG+AGG	-	chr1.3:63219018-63219037	MS.gene21604:CDS	30.0%
	ATTAGTTGCTCTATTTGCTT+AGG	-	chr1.3:63218990-63219009	MS.gene21604:CDS	30.0%
!	TCTGAGAGTATAAAAGTTTC+GGG	+	chr1.3:63218944-63218963	None:intergenic	30.0%
	GTATCCTTCAAAACTTGTGT+CGG	+	chr1.3:63218922-63218941	None:intergenic	35.0%
	TACTCTCAGATTCAGAAGAA+TGG	-	chr1.3:63218954-63218973	MS.gene21604:CDS	35.0%
	TGATAAAGATGACCACAATC+TGG	+	chr1.3:63219050-63219069	None:intergenic	35.0%
	TGTATTTGGTCTCGTATTCT+TGG	-	chr1.3:63218767-63218786	MS.gene21604:CDS	35.0%
!	TTTTCTACATATGGGACAAG+TGG	+	chr1.3:63219108-63219127	None:intergenic	35.0%
	ATTGAGTCTTCATGACGATG+TGG	+	chr1.3:63218873-63218892	None:intergenic	40.0%
	GAAGACTCAATCATGGAACA+AGG	-	chr1.3:63218882-63218901	MS.gene21604:CDS	40.0%
	TCGTCATGAAGACTCAATCA+TGG	-	chr1.3:63218875-63218894	MS.gene21604:CDS	40.0%
	TTGAGGTTACTTCCAGATTG+TGG	-	chr1.3:63219035-63219054	MS.gene21604:CDS	40.0%
!	ATGTTGCTTGTGTTGATCCA+TGG	-	chr1.3:63219069-63219088	MS.gene21604:CDS	40.0%
!	TCAAAACCGTTGTTGTTGTG+TGG	+	chr1.3:63218717-63218736	None:intergenic	40.0%
!!	AACAACGGTTTTGACGCAAA+TGG	-	chr1.3:63218723-63218742	MS.gene21604:CDS	40.0%
!!	ACAACGGTTTTGACGCAAAT+GGG	-	chr1.3:63218724-63218743	MS.gene21604:CDS	40.0%
!!	CATACCGACACAAGTTTTGA+AGG	-	chr1.3:63218915-63218934	MS.gene21604:CDS	40.0%
	GAACCTCCACACAACAACAA+CGG	-	chr1.3:63218708-63218727	MS.gene21604:CDS	45.0%
	GTGGAATGTAACATGAGCCA+TGG	+	chr1.3:63219089-63219108	None:intergenic	45.0%
!	AAACCGTTGTTGTTGTGTGG+AGG	+	chr1.3:63218714-63218733	None:intergenic	45.0%
!	ATGACGATGTGGTGGAAAAC+CGG	+	chr1.3:63218862-63218881	None:intergenic	45.0%
	GAGTCTTCATGACGATGTGG+TGG	+	chr1.3:63218870-63218889	None:intergenic	50.0%
	GAGCAACAACAACGGCACCT+CGG	-	chr1.3:63218686-63218705	MS.gene21604:CDS	55.0%
	GTTGTTGTGTGGAGGTTCCG+AGG	+	chr1.3:63218706-63218725	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	63218684	63219148	63218684	ID=MS.gene21604
chr1.3	mRNA	63218684	63219148	63218684	ID=MS.gene21604.t1;Parent=MS.gene21604
chr1.3	exon	63218684	63219148	63218684	ID=MS.gene21604.t1.exon1;Parent=MS.gene21604.t1
chr1.3	CDS	63218684	63219148	63218684	ID=cds.MS.gene21604.t1;Parent=MS.gene21604.t1

Gene Sequence

>MS.gene21604

ATGAGCAACAACAACGGCACCTCGGAACCTCCACACAACAACAACGGTTTTGACGCAAATGGGTTCACATATATCTTAATACTTGTATTTGGTCTCGTATTCTTGGTTCTATCAATAATTGTTGCTTGTATTCGACTTCGTAGTTCACAAAGTCGAAACATTCTCAATATTTTGTCCGGTTTTCCACCACATCGTCATGAAGACTCAATCATGGAACAAGGACTTCGTCATCATACCGACACAAGTTTTGAAGGATACCCGAAACTTTTATACTCTCAGATTCAGAAGAATGGTTCTTCAACTGCAATTAGTTGCTCTATTTGCTTAGGAGACTATAAAGAAAGTGACATGTTGAGGTTACTTCCAGATTGTGGTCATCTTTATCATGTTGCTTGTGTTGATCCATGGCTCATGTTACATTCCACTTGTCCCATATGTAGAAAATCATCACTAGCTTCATCCTAG

Protein sequence

>MS.gene21604.t1

MSNNNGTSEPPHNNNGFDANGFTYILILVFGLVFLVLSIIVACIRLRSSQSRNILNILSGFPPHRHEDSIMEQGLRHHTDTSFEGYPKLLYSQIQKNGSSTAISCSICLGDYKESDMLRLLPDCGHLYHVACVDPWLMLHSTCPICRKSSLASS