Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21617.t1 | XP_003611082.1 | 98.3 | 533 | 9 | 0 | 64 | 596 | 64 | 596 | 4.60E-299 | 1036.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21617.t1 | Q3LHL9 | 29.1 | 110 | 73 | 2 | 74 | 182 | 1485 | 1590 | 9.2e-06 | 53.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21617.t1 | G7KC24 | 98.3 | 533 | 9 | 0 | 64 | 596 | 64 | 596 | 3.3e-299 | 1036.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050085 | MS.gene21617 | 0.806665 | 7.37E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene21617 | 0.842441 | 2.58E-58 | -1.69E-46 |
| MS.gene051975 | MS.gene21617 | 0.813357 | 2.67E-51 | -1.69E-46 |
| MS.gene056986 | MS.gene21617 | 0.816917 | 4.32E-52 | -1.69E-46 |
| MS.gene057890 | MS.gene21617 | -0.80958 | 1.76E-50 | -1.69E-46 |
| MS.gene06010 | MS.gene21617 | 0.81383 | 2.10E-51 | -1.69E-46 |
| MS.gene06011 | MS.gene21617 | 0.803007 | 4.28E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21617.t1 | MTR_5g010190 | 98.322 | 596 | 10 | 0 | 1 | 596 | 1 | 596 | 0.0 | 1219 |
| MS.gene21617.t1 | MTR_5g010190 | 97.386 | 459 | 12 | 0 | 1 | 459 | 1 | 459 | 0.0 | 931 |
| MS.gene21617.t1 | MTR_8g098290 | 62.500 | 600 | 198 | 9 | 1 | 594 | 1 | 579 | 0.0 | 711 |
| MS.gene21617.t1 | MTR_8g098260 | 61.538 | 520 | 188 | 5 | 29 | 546 | 16 | 525 | 0.0 | 606 |
| MS.gene21617.t1 | MTR_8g098290 | 61.731 | 439 | 158 | 6 | 1 | 433 | 1 | 435 | 3.96e-179 | 514 |
| MS.gene21617.t1 | MTR_6g464540 | 45.326 | 353 | 117 | 5 | 70 | 422 | 50 | 326 | 6.60e-95 | 295 |
| MS.gene21617.t1 | MTR_6g007787 | 33.333 | 141 | 90 | 3 | 96 | 236 | 39 | 175 | 3.48e-16 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21617.t1 | AT4G11560 | 51.678 | 596 | 227 | 9 | 1 | 562 | 2 | 570 | 0.0 | 588 |
| MS.gene21617.t1 | AT4G11560 | 51.287 | 505 | 193 | 8 | 1 | 471 | 2 | 487 | 1.34e-169 | 491 |
| MS.gene21617.t1 | AT2G25120 | 38.386 | 409 | 181 | 8 | 11 | 417 | 9 | 348 | 1.26e-70 | 233 |
| MS.gene21617.t1 | AT4G23120 | 40.390 | 359 | 151 | 8 | 67 | 422 | 25 | 323 | 2.25e-70 | 231 |
| MS.gene21617.t1 | AT3G43990 | 52.973 | 185 | 85 | 2 | 65 | 247 | 48 | 232 | 2.87e-58 | 200 |
| MS.gene21617.t1 | AT3G48050 | 38.298 | 141 | 83 | 3 | 96 | 236 | 47 | 183 | 1.85e-23 | 106 |
| MS.gene21617.t1 | AT3G48050 | 38.298 | 141 | 83 | 3 | 96 | 236 | 47 | 183 | 1.85e-23 | 106 |
| MS.gene21617.t1 | AT3G48060 | 38.298 | 141 | 83 | 3 | 96 | 236 | 47 | 183 | 2.24e-23 | 106 |
| MS.gene21617.t1 | AT3G48060 | 38.298 | 141 | 83 | 3 | 96 | 236 | 47 | 183 | 2.24e-23 | 106 |
| MS.gene21617.t1 | AT3G48060 | 38.298 | 141 | 83 | 3 | 96 | 236 | 48 | 184 | 2.28e-23 | 106 |
Find 131 sgRNAs with CRISPR-Local
Find 370 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAACATTGTCATCTTTCT+TGG | 0.116362 | 5.2:+3539309 | None:intergenic |
| TGGGCTTGCCAAATGACTTC+TGG | 0.171692 | 5.2:+3539329 | None:intergenic |
| GGTGAACCCCTTAGGGTTTC+GGG | 0.201705 | 5.2:-3544052 | MS.gene21617:CDS |
| TATGACACCCATTGAATTAA+AGG | 0.227423 | 5.2:-3540798 | MS.gene21617:intron |
| ACACAACTCCCAGGTGTTTC+AGG | 0.232493 | 5.2:+3541926 | None:intergenic |
| TTTCTCATCAGGCTCCTTCT+TGG | 0.255962 | 5.2:+3539861 | None:intergenic |
| GTAAATTTCAATGCACTAAC+TGG | 0.263561 | 5.2:-3541872 | MS.gene21617:CDS |
| TACGAATCGTTTGAGTTTGA+TGG | 0.267511 | 5.2:-3544004 | MS.gene21617:CDS |
| TCCTCAGGCACAAGCATTAC+AGG | 0.270223 | 5.2:+3543882 | None:intergenic |
| AATCTAATTGCCGCAACTTT+TGG | 0.277842 | 5.2:+3541458 | None:intergenic |
| TTCCTTATCAGCCTGTCTTT+TGG | 0.290673 | 5.2:+3539285 | None:intergenic |
| CTTTGAATCCAATGCATCTA+TGG | 0.291752 | 5.2:+3539492 | None:intergenic |
| TGGTGAACCCCTTAGGGTTT+CGG | 0.292897 | 5.2:-3544053 | MS.gene21617:CDS |
| CTAGCACGCCGTCTGTTAAA+TGG | 0.309640 | 5.2:-3540848 | MS.gene21617:CDS |
| AGAAGCCCCTCCTGCTGTTC+AGG | 0.311627 | 5.2:-3542053 | MS.gene21617:CDS |
| TGAACCATCTATTCCTGATT+TGG | 0.330530 | 5.2:-3539356 | MS.gene21617:CDS |
| ATCTCGTACCTTTAATTCAA+TGG | 0.344360 | 5.2:+3540790 | None:intergenic |
| TCAACATTGTCATCTTTCTT+GGG | 0.347350 | 5.2:+3539310 | None:intergenic |
| GATAGTACAGAAAAGGAAAA+AGG | 0.351330 | 5.2:-3541782 | MS.gene21617:CDS |
| CCCCTTAGGGTTTCGGGAAA+AGG | 0.355951 | 5.2:-3544046 | MS.gene21617:CDS |
| TGCGAAGGAAGAAGAGAAAA+AGG | 0.356657 | 5.2:-3544110 | MS.gene21617:CDS |
| TGCATGTGTTGTTTCTCATC+AGG | 0.363326 | 5.2:+3539850 | None:intergenic |
| GACTTCTGGGCGGCCAAATC+AGG | 0.367390 | 5.2:+3539343 | None:intergenic |
| TTCAAGATGCACAGATTCTA+AGG | 0.369703 | 5.2:-3539722 | MS.gene21617:CDS |
| CAAGCTCGTCAATTTCTTGC+TGG | 0.369834 | 5.2:+3542125 | None:intergenic |
| GGGCTTGCCAAATGACTTCT+GGG | 0.374683 | 5.2:+3539330 | None:intergenic |
| CCAGGATGTTGCTTACGTTT+CGG | 0.380998 | 5.2:+3542226 | None:intergenic |
| ACAGCAGGAGGGGCTTCTTC+AGG | 0.386675 | 5.2:+3542058 | None:intergenic |
| TTGGCCGCCCAGAAGTCATT+TGG | 0.395640 | 5.2:-3539337 | MS.gene21617:CDS |
| ACCTTGATTATAGCAACATA+TGG | 0.401609 | 5.2:+3543846 | None:intergenic |
| AGCCGATTGGTGAACCCCTT+AGG | 0.404644 | 5.2:-3544060 | MS.gene21617:CDS |
| GTGTTGCCTGTGGTAATTCC+TGG | 0.411316 | 5.2:-3539546 | MS.gene21617:CDS |
| ATCGTTATTGCTATTGTCGT+TGG | 0.415419 | 5.2:+3544138 | None:intergenic |
| CCAATCGGCTTTGCATCCTC+TGG | 0.421294 | 5.2:+3544073 | None:intergenic |
| GACATTATACAGTACTTTAG+TGG | 0.426230 | 5.2:-3542430 | MS.gene21617:CDS |
| CTCCTCCCTTGAAACATCAA+TGG | 0.427461 | 5.2:+3541982 | None:intergenic |
| GCCGATTGGTGAACCCCTTA+GGG | 0.434738 | 5.2:-3544059 | MS.gene21617:CDS |
| ATGGCTGAAACAGCAGCATC+TGG | 0.444398 | 5.2:+3541538 | None:intergenic |
| TTTGCATCCTCTGGAGTTTG+AGG | 0.446276 | 5.2:+3544082 | None:intergenic |
| TTTCTCCCATTGATGTTTCA+AGG | 0.450822 | 5.2:-3541988 | MS.gene21617:CDS |
| CTCATCACGGGAGGCATACC+AGG | 0.460341 | 5.2:+3539528 | None:intergenic |
| TCTCGTACCTTTAATTCAAT+GGG | 0.468552 | 5.2:+3540791 | None:intergenic |
| AGAAATAGCAAATGACTCTC+AGG | 0.469188 | 5.2:-3541705 | MS.gene21617:CDS |
| ACTCCCAGGTGTTTCAGGCT+TGG | 0.469894 | 5.2:+3541931 | None:intergenic |
| TTTCGGAAACTGTTTGTTCA+AGG | 0.470021 | 5.2:+3542243 | None:intergenic |
| ACCCTAAGGGGTTCACCAAT+CGG | 0.471822 | 5.2:+3544058 | None:intergenic |
| CATTCCAAGCCTGAAACACC+TGG | 0.472142 | 5.2:-3541935 | MS.gene21617:CDS |
| GATGACCTCTCTAAGAAAAC+AGG | 0.475849 | 5.2:-3539379 | MS.gene21617:CDS |
| GTGTTTCAGGCTTGGAATGT+TGG | 0.476316 | 5.2:+3541939 | None:intergenic |
| GGCCAAAAGACAGGCTGATA+AGG | 0.483360 | 5.2:-3539287 | MS.gene21617:CDS |
| GTCATGTCCTCCTGAACAGC+AGG | 0.484994 | 5.2:+3542043 | None:intergenic |
| TCCTCCCTTGAAACATCAAT+GGG | 0.486319 | 5.2:+3541983 | None:intergenic |
| ATCTGTGCATCTTGAACAGC+GGG | 0.489230 | 5.2:+3539729 | None:intergenic |
| GAAACATTCATCGTGACAAA+TGG | 0.489869 | 5.2:-3541850 | MS.gene21617:CDS |
| AGATTCTAAGGTGGGCTTGA+GGG | 0.491645 | 5.2:-3539710 | MS.gene21617:CDS |
| TAATGATGATAGTACAGAAA+AGG | 0.495563 | 5.2:-3541789 | MS.gene21617:CDS |
| ACCATATGTTGCTATAATCA+AGG | 0.496977 | 5.2:-3543847 | MS.gene21617:intron |
| GTCTTCTTCGTCATCACTTG+TGG | 0.500496 | 5.2:+3544243 | None:intergenic |
| AGGGTTTCGGGAAAAGGAAG+AGG | 0.504213 | 5.2:-3544040 | MS.gene21617:CDS |
| GTACTTTAGTGGCAGCATAA+TGG | 0.504494 | 5.2:-3542419 | MS.gene21617:CDS |
| GCGGCCAAATCAGGAATAGA+TGG | 0.511799 | 5.2:+3539352 | None:intergenic |
| TGCACTGACCATAGATGCAT+TGG | 0.516654 | 5.2:-3539500 | MS.gene21617:CDS |
| GCTGGAAATCGTGTGATACA+AGG | 0.519406 | 5.2:-3542342 | MS.gene21617:CDS |
| GTCCTCCTGAACAGCAGGAG+GGG | 0.521044 | 5.2:+3542048 | None:intergenic |
| CATTGATGTTTCAAGGGAGG+AGG | 0.524697 | 5.2:-3541981 | MS.gene21617:CDS |
| CAATGTTGAGGCCAAAAGAC+AGG | 0.525748 | 5.2:-3539296 | MS.gene21617:CDS |
| ACAAAGGGTGTATGACACTT+TGG | 0.526883 | 5.2:-3542194 | MS.gene21617:CDS |
| TTCTCCCATTGATGTTTCAA+GGG | 0.527106 | 5.2:-3541987 | MS.gene21617:CDS |
| AGCTTTGAATGCTGAGGTGG+CGG | 0.528450 | 5.2:+3544211 | None:intergenic |
| GCTGACTGATAAGGACTATG+AGG | 0.528522 | 5.2:-3542155 | MS.gene21617:CDS |
| CCGAAACGTAAGCAACATCC+TGG | 0.530479 | 5.2:-3542226 | MS.gene21617:CDS |
| TCCTGGCTTCATCGTACAAA+GGG | 0.531256 | 5.2:-3542209 | MS.gene21617:CDS |
| TTGTGTGAGAAATGGTGAAT+CGG | 0.535101 | 5.2:-3544282 | None:intergenic |
| CTCTCAGGACAAGGGTCAGA+AGG | 0.536064 | 5.2:-3541690 | MS.gene21617:intron |
| ACACTTTGGAAAGGAAACTC+TGG | 0.538265 | 5.2:-3542180 | MS.gene21617:CDS |
| CGAAGCTTTGAATGCTGAGG+TGG | 0.540004 | 5.2:+3544208 | None:intergenic |
| CATTCATCGTGACAAATGGT+TGG | 0.542257 | 5.2:-3541846 | MS.gene21617:CDS |
| TTCGGAAACTGTTTGTTCAA+GGG | 0.542344 | 5.2:+3542244 | None:intergenic |
| TGGACATGATGACCGTTACC+AGG | 0.543675 | 5.2:-3539674 | MS.gene21617:intron |
| TGAAGATGTTCAGAAGAAGC+TGG | 0.546919 | 5.2:-3539431 | MS.gene21617:CDS |
| ATTCTTGATTGCATCAGACT+CGG | 0.548043 | 5.2:+3541748 | None:intergenic |
| GGTGAATCGGCGCTTCACTC+AGG | 0.550988 | 5.2:-3544269 | MS.gene21617:CDS |
| AGTGGCAGCATAATGGTGGC+TGG | 0.555599 | 5.2:-3542412 | MS.gene21617:CDS |
| ACCCTTTGTACGATGAAGCC+AGG | 0.557212 | 5.2:+3542208 | None:intergenic |
| CCAGAGGATGCAAAGCCGAT+TGG | 0.557621 | 5.2:-3544073 | MS.gene21617:CDS |
| AGCCCCTCCTGCTGTTCAGG+AGG | 0.557713 | 5.2:-3542050 | MS.gene21617:CDS |
| TCCTGTAATGCTTGTGCCTG+AGG | 0.559738 | 5.2:-3543883 | MS.gene21617:CDS |
| ACTCTGGAAGCTGACTGATA+AGG | 0.564232 | 5.2:-3542164 | MS.gene21617:CDS |
| TCCCATTGATGTTTCAAGGG+AGG | 0.569045 | 5.2:-3541984 | MS.gene21617:CDS |
| CAGATTCTAAGGTGGGCTTG+AGG | 0.569209 | 5.2:-3539711 | MS.gene21617:CDS |
| AGATGCACAGATTCTAAGGT+GGG | 0.570619 | 5.2:-3539718 | MS.gene21617:CDS |
| CAGTGCAGACACCTCATCAC+GGG | 0.572290 | 5.2:+3539516 | None:intergenic |
| TCAACTCTCCATTTAACAGA+CGG | 0.574437 | 5.2:+3540840 | None:intergenic |
| TTTGAATGCTGAGGTGGCGG+TGG | 0.576736 | 5.2:+3544214 | None:intergenic |
| AGCAAATGACTCTCAGGACA+AGG | 0.577134 | 5.2:-3541699 | MS.gene21617:CDS |
| TTGAGGGAGATTATCCATGC+TGG | 0.591322 | 5.2:-3539694 | MS.gene21617:CDS |
| GGGTTTCGGGAAAAGGAAGA+GGG | 0.591686 | 5.2:-3544039 | MS.gene21617:CDS |
| TCAGGAGGGTTTGACTGCTG+AGG | 0.593688 | 5.2:-3539890 | MS.gene21617:intron |
| CAATAACGATAGCGATGCGA+AGG | 0.594367 | 5.2:-3544125 | MS.gene21617:CDS |
| TTATGCATAACAGACTCTGC+AGG | 0.595127 | 5.2:+3542286 | None:intergenic |
| AACGGTCATCATGTCCAGCA+TGG | 0.596432 | 5.2:+3539680 | None:intergenic |
| GAATCGGCGCTTCACTCAGG+TGG | 0.600311 | 5.2:-3544266 | MS.gene21617:CDS |
| ATCTGGCCACACAAAAGACT+CGG | 0.601764 | 5.2:+3541555 | None:intergenic |
| ATGTCCTCCTGAACAGCAGG+AGG | 0.605044 | 5.2:+3542046 | None:intergenic |
| TTTCGGGAAAAGGAAGAGGG+AGG | 0.606566 | 5.2:-3544036 | MS.gene21617:CDS |
| ATCGTGACAAATGGTTGGAG+AGG | 0.607774 | 5.2:-3541841 | MS.gene21617:CDS |
| GATGTTTCAAGGGAGGAGGA+AGG | 0.612495 | 5.2:-3541977 | MS.gene21617:CDS |
| CAGAAAACTATGAAACGCAT+CGG | 0.612566 | 5.2:-3542100 | MS.gene21617:CDS |
| ATCCTGGCTTCATCGTACAA+AGG | 0.616688 | 5.2:-3542210 | MS.gene21617:CDS |
| CTGGTATGCCTCCCGTGATG+AGG | 0.618696 | 5.2:-3539527 | MS.gene21617:CDS |
| GGCATACCAGGAATTACCAC+AGG | 0.621637 | 5.2:+3539540 | None:intergenic |
| TTGCGAAGCTTTGAATGCTG+AGG | 0.622899 | 5.2:+3544205 | None:intergenic |
| CAGCTGGAATGTGTTGCCTG+TGG | 0.628082 | 5.2:-3539556 | MS.gene21617:CDS |
| CTTTAGTGGCAGCATAATGG+TGG | 0.630836 | 5.2:-3542416 | MS.gene21617:CDS |
| TGTCCTCCTGAACAGCAGGA+GGG | 0.631508 | 5.2:+3542047 | None:intergenic |
| GGGTGTATGACACTTTGGAA+AGG | 0.632035 | 5.2:-3542189 | MS.gene21617:CDS |
| CTGGAAATCGTGTGATACAA+GGG | 0.632399 | 5.2:-3542341 | MS.gene21617:CDS |
| GCATAATGGTGGCTGGACAG+TGG | 0.638281 | 5.2:-3542405 | MS.gene21617:CDS |
| CAAGAAAGATGACAATGTTG+AGG | 0.639737 | 5.2:-3539308 | MS.gene21617:CDS |
| AATCTGTGCATCTTGAACAG+CGG | 0.647782 | 5.2:+3539728 | None:intergenic |
| AGAAGTATAACCAAAAGTTG+CGG | 0.649597 | 5.2:-3541468 | MS.gene21617:CDS |
| TCAGTGCAGACACCTCATCA+CGG | 0.652365 | 5.2:+3539515 | None:intergenic |
| ACTCTGCAGGAACCTCATCA+CGG | 0.657979 | 5.2:+3542299 | None:intergenic |
| GTCTGTTATGCATAAGTGTG+TGG | 0.658812 | 5.2:-3542278 | MS.gene21617:CDS |
| AAGATGCACAGATTCTAAGG+TGG | 0.659421 | 5.2:-3539719 | MS.gene21617:CDS |
| TCATTATTAACACAACTCCC+AGG | 0.665992 | 5.2:+3541917 | None:intergenic |
| TGCAGACACCTCATCACGGG+AGG | 0.667878 | 5.2:+3539519 | None:intergenic |
| GCAAATGACTCTCAGGACAA+GGG | 0.672703 | 5.2:-3541698 | MS.gene21617:CDS |
| ATTCCAAGCCTGAAACACCT+GGG | 0.701124 | 5.2:-3541934 | MS.gene21617:CDS |
| GGATTCGCCTCAAACTCCAG+AGG | 0.710400 | 5.2:-3544089 | MS.gene21617:CDS |
| CTTGCCAAATGACTTCTGGG+CGG | 0.738628 | 5.2:+3539333 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTTATATTTATCTCT+AGG | - | chr5.2:3542271-3542290 | MS.gene21617:CDS | 10.0% |
| !! | GTAAAAAATAAATATTGATA+AGG | + | chr5.2:3541027-3541046 | None:intergenic | 10.0% |
| !!! | TATTTTAGAAAATATTAAGT+TGG | - | chr5.2:3543048-3543067 | MS.gene21617:intron | 10.0% |
| !! | AATTTATATTTATCTCTAGG+AGG | - | chr5.2:3542274-3542293 | MS.gene21617:CDS | 20.0% |
| !! | ATGGTAAAGTTATAAATAAG+AGG | + | chr5.2:3542498-3542517 | None:intergenic | 20.0% |
| !! | ATGTGGCAAAAAATAATTTA+AGG | - | chr5.2:3540339-3540358 | MS.gene21617:intron | 20.0% |
| !! | CAAAAAATAAAAGAAGCTTA+AGG | - | chr5.2:3541532-3541551 | MS.gene21617:CDS | 20.0% |
| !! | GGCAAAAAAAAAAAATTTGA+GGG | + | chr5.2:3540937-3540956 | None:intergenic | 20.0% |
| !! | TAAAGTTATAAATAAGAGGT+AGG | + | chr5.2:3542494-3542513 | None:intergenic | 20.0% |
| !! | TAGGATAAAGAAATAATCAA+AGG | + | chr5.2:3542976-3542995 | None:intergenic | 20.0% |
| !! | TGGCAAAAAAAAAAAATTTG+AGG | + | chr5.2:3540938-3540957 | None:intergenic | 20.0% |
| !! | TGTGGCAAAAAATAATTTAA+GGG | - | chr5.2:3540340-3540359 | MS.gene21617:intron | 20.0% |
| !! | TTAATGTCATTGAAAAGAAA+GGG | - | chr5.2:3542439-3542458 | MS.gene21617:intron | 20.0% |
| !! | TTATAGAATGATTGAACATT+TGG | - | chr5.2:3539814-3539833 | MS.gene21617:intron | 20.0% |
| !!! | AAAAATAGATCTGATTTGTA+TGG | - | chr5.2:3540613-3540632 | MS.gene21617:intron | 20.0% |
| !!! | AATAAAAGATGCTTTTGAAA+AGG | - | chr5.2:3543586-3543605 | MS.gene21617:intron | 20.0% |
| !!! | CTAATTGTGATTTAGAATTA+GGG | - | chr5.2:3539745-3539764 | MS.gene21617:intron | 20.0% |
| !!! | GATTTTCGATTTGTATTATT+GGG | - | chr5.2:3540657-3540676 | MS.gene21617:intron | 20.0% |
| !!! | GTATATTCATTTCTTTTAGT+AGG | + | chr5.2:3542995-3543014 | None:intergenic | 20.0% |
| !!! | GTATTTTCTAAAATGTTCAA+TGG | - | chr5.2:3542798-3542817 | MS.gene21617:intron | 20.0% |
| !!! | GTCATATTCAAAATTTTAGA+AGG | + | chr5.2:3542741-3542760 | None:intergenic | 20.0% |
| !!! | GTTGATTCTATTTAAAACAA+TGG | - | chr5.2:3543318-3543337 | MS.gene21617:intron | 20.0% |
| !!! | TAGCAAACAAATTTTTGATA+GGG | + | chr5.2:3539913-3539932 | None:intergenic | 20.0% |
| !!! | TGATTTTCGATTTGTATTAT+TGG | - | chr5.2:3540656-3540675 | MS.gene21617:intron | 20.0% |
| !!! | TTAAATTATTTTTTGCCACA+TGG | + | chr5.2:3540340-3540359 | None:intergenic | 20.0% |
| !!! | TTAGCAAACAAATTTTTGAT+AGG | + | chr5.2:3539914-3539933 | None:intergenic | 20.0% |
| ! | AACAGAGAAAAAATTGTAGT+GGG | + | chr5.2:3543750-3543769 | None:intergenic | 25.0% |
| ! | ACATTGCATAGTATTATTGT+TGG | - | chr5.2:3543205-3543224 | MS.gene21617:intron | 25.0% |
| ! | ATCTACTAAATATGAACTTC+AGG | - | chr5.2:3543645-3543664 | MS.gene21617:intron | 25.0% |
| ! | ATTTAGTCCATTTATGTTCT+TGG | - | chr5.2:3540307-3540326 | MS.gene21617:intron | 25.0% |
| ! | CCTAATTCTAAATCACAATT+AGG | + | chr5.2:3539747-3539766 | None:intergenic | 25.0% |
| ! | CTACAAAAATGCAACAAAAA+GGG | + | chr5.2:3543157-3543176 | None:intergenic | 25.0% |
| ! | CTTAATGTCATTGAAAAGAA+AGG | - | chr5.2:3542438-3542457 | MS.gene21617:intron | 25.0% |
| ! | TAAATATTGATAAGGAGTTC+AGG | + | chr5.2:3541019-3541038 | None:intergenic | 25.0% |
| ! | TAATGATGATAGTACAGAAA+AGG | - | chr5.2:3541764-3541783 | MS.gene21617:CDS | 25.0% |
| ! | TACAAAAATGCAACAAAAAG+GGG | + | chr5.2:3543156-3543175 | None:intergenic | 25.0% |
| ! | TATAGTCATTTAACCCAATA+AGG | + | chr5.2:3543185-3543204 | None:intergenic | 25.0% |
| ! | TCTACAAAAATGCAACAAAA+AGG | + | chr5.2:3543158-3543177 | None:intergenic | 25.0% |
| ! | TTAGGATATTGAAGCTAATT+TGG | - | chr5.2:3540033-3540052 | MS.gene21617:intron | 25.0% |
| ! | TTTAGTCCATTTATGTTCTT+GGG | - | chr5.2:3540308-3540327 | MS.gene21617:intron | 25.0% |
| !! | CATATTGTTGCTACATTTTA+AGG | - | chr5.2:3542209-3542228 | MS.gene21617:CDS | 25.0% |
| !! | CCTAATTGTGATTTAGAATT+AGG | - | chr5.2:3539744-3539763 | MS.gene21617:intron | 25.0% |
| !! | TAAACTGCATATTGATTGTT+TGG | - | chr5.2:3543610-3543629 | MS.gene21617:intron | 25.0% |
| !! | TTTTGATCAGTTTTTGATGA+AGG | - | chr5.2:3539783-3539802 | MS.gene21617:intron | 25.0% |
| !!! | AAATATTAAGTTGGAGCATT+TGG | - | chr5.2:3543057-3543076 | MS.gene21617:intron | 25.0% |
| !!! | AAATTGTTGTTTTTTGTAGG+AGG | - | chr5.2:3539646-3539665 | MS.gene21617:intron | 25.0% |
| !!! | AAGAACATAAATGGACTAAA+TGG | + | chr5.2:3540308-3540327 | None:intergenic | 25.0% |
| !!! | AAGCTAATTTGGTTTTTAAG+TGG | - | chr5.2:3540044-3540063 | MS.gene21617:intron | 25.0% |
| !!! | GCAATTAGATTTTAATCTCA+AGG | - | chr5.2:3542107-3542126 | MS.gene21617:CDS | 25.0% |
| !!! | TTACTTGCTGTTTAAATGAA+AGG | + | chr5.2:3543429-3543448 | None:intergenic | 25.0% |
| !!! | TTCAAAAGCATCTTTTATTG+AGG | + | chr5.2:3543585-3543604 | None:intergenic | 25.0% |
| AAAAAATGCAAACCTGGTAA+CGG | + | chr5.2:3543894-3543913 | None:intergenic | 30.0% | |
| AAACCCTAAAATGTTGTTGA+GGG | - | chr5.2:3539857-3539876 | MS.gene21617:CDS | 30.0% | |
| AAGTACAATATCTGTAACTC+TGG | - | chr5.2:3540139-3540158 | MS.gene21617:intron | 30.0% | |
| AATATCTGTAACTCTGGTAT+AGG | - | chr5.2:3540145-3540164 | MS.gene21617:intron | 30.0% | |
| ACAAAAATGCAACAAAAAGG+GGG | + | chr5.2:3543155-3543174 | None:intergenic | 30.0% | |
| ACCATATGTTGCTATAATCA+AGG | - | chr5.2:3539706-3539725 | MS.gene21617:CDS | 30.0% | |
| ACCTTGATTATAGCAACATA+TGG | + | chr5.2:3539710-3539729 | None:intergenic | 30.0% | |
| ACTAAATATGAACTTCAGGA+GGG | - | chr5.2:3543649-3543668 | MS.gene21617:intron | 30.0% | |
| ATATTGATATCTGATCCATC+AGG | - | chr5.2:3540100-3540119 | MS.gene21617:intron | 30.0% | |
| ATCAAAACACTCAGATTGAA+AGG | + | chr5.2:3541087-3541106 | None:intergenic | 30.0% | |
| ATCTCGTACCTTTAATTCAA+TGG | + | chr5.2:3542766-3542785 | None:intergenic | 30.0% | |
| CAACAGAGAAAAAATTGTAG+TGG | + | chr5.2:3543751-3543770 | None:intergenic | 30.0% | |
| CAGAATTCATATACTCCTTA+AGG | + | chr5.2:3541955-3541974 | None:intergenic | 30.0% | |
| CATAATGAGAAACAATGAGT+TGG | - | chr5.2:3542337-3542356 | MS.gene21617:CDS | 30.0% | |
| CTTGAAGTCAAAATTCCAAA+CGG | - | chr5.2:3543915-3543934 | MS.gene21617:intron | 30.0% | |
| GAAAATCAAGAAAAGCAGAA+AGG | + | chr5.2:3541051-3541070 | None:intergenic | 30.0% | |
| GACATTATACAGTACTTTAG+TGG | - | chr5.2:3541123-3541142 | MS.gene21617:intron | 30.0% | |
| GATAGTACAGAAAAGGAAAA+AGG | - | chr5.2:3541771-3541790 | MS.gene21617:CDS | 30.0% | |
| GCTGTGATATAATTTAGGAA+AGG | - | chr5.2:3540187-3540206 | MS.gene21617:intron | 30.0% | |
| GTAAATTTCAATGCACTAAC+TGG | - | chr5.2:3541681-3541700 | MS.gene21617:intron | 30.0% | |
| TAAACCCTAAAATGTTGTTG+AGG | - | chr5.2:3539856-3539875 | MS.gene21617:CDS | 30.0% | |
| TACTAAATATGAACTTCAGG+AGG | - | chr5.2:3543648-3543667 | MS.gene21617:intron | 30.0% | |
| TATGACACCCATTGAATTAA+AGG | - | chr5.2:3542755-3542774 | MS.gene21617:intron | 30.0% | |
| TCAACATTGTCATCTTTCTT+GGG | + | chr5.2:3544246-3544265 | None:intergenic | 30.0% | |
| TCAAGTAAAAAATGCAAACC+TGG | + | chr5.2:3543900-3543919 | None:intergenic | 30.0% | |
| TCATATACTCCTTAAGGAAA+GGG | + | chr5.2:3541949-3541968 | None:intergenic | 30.0% | |
| TCTCGTACCTTTAATTCAAT+GGG | + | chr5.2:3542765-3542784 | None:intergenic | 30.0% | |
| TGAATCACGAAATCAAATCA+CGG | + | chr5.2:3539613-3539632 | None:intergenic | 30.0% | |
| TGCAGAGAAAAATTATAGGA+AGG | - | chr5.2:3539880-3539899 | MS.gene21617:CDS | 30.0% | |
| TGCATAGTATTATTGTTGGT+TGG | - | chr5.2:3543209-3543228 | MS.gene21617:intron | 30.0% | |
| TGTTACGTTGATGTTGTAAA+GGG | - | chr5.2:3540246-3540265 | MS.gene21617:intron | 30.0% | |
| TTCATATACTCCTTAAGGAA+AGG | + | chr5.2:3541950-3541969 | None:intergenic | 30.0% | |
| TTCTGCAAAGAACACAAAAA+TGG | + | chr5.2:3542675-3542694 | None:intergenic | 30.0% | |
| TTTGTATTATTGGGAATCTC+AGG | - | chr5.2:3540666-3540685 | MS.gene21617:intron | 30.0% | |
| ! | AAAAAATTGTAGTGGGAGAA+AGG | + | chr5.2:3543743-3543762 | None:intergenic | 30.0% |
| ! | AACATCTTCAAATTTTGCAG+TGG | + | chr5.2:3544112-3544131 | None:intergenic | 30.0% |
| ! | AGAAGTATAACCAAAAGTTG+CGG | - | chr5.2:3542085-3542104 | MS.gene21617:CDS | 30.0% |
| ! | ATTGATTGTTTGGTTTCGTA+TGG | - | chr5.2:3543620-3543639 | MS.gene21617:intron | 30.0% |
| ! | TTTTGTAGACTGTCCTTATT+GGG | - | chr5.2:3543169-3543188 | MS.gene21617:intron | 30.0% |
| ! | TTTTTGTAGACTGTCCTTAT+TGG | - | chr5.2:3543168-3543187 | MS.gene21617:intron | 30.0% |
| !! | AGCATTTGGAACTTTTTCTA+GGG | - | chr5.2:3543071-3543090 | MS.gene21617:intron | 30.0% |
| !! | ATCAAAGGAGCATAACATTT+TGG | + | chr5.2:3542961-3542980 | None:intergenic | 30.0% |
| !! | ATTTTGGAGACTATTGTAGA+AGG | + | chr5.2:3542945-3542964 | None:intergenic | 30.0% |
| !! | TTCTGCTTTTCTTGATTTTC+TGG | - | chr5.2:3541051-3541070 | MS.gene21617:intron | 30.0% |
| !! | TTGTATGGAATTGCTTTTGT+AGG | - | chr5.2:3543296-3543315 | MS.gene21617:intron | 30.0% |
| !! | TTTGATATTGCTTTTCTGTC+AGG | - | chr5.2:3541101-3541120 | MS.gene21617:intron | 30.0% |
| !!! | AGTTTTTTCAAGAGCAACTA+TGG | + | chr5.2:3542037-3542056 | None:intergenic | 30.0% |
| !!! | CGCAAATTGTTGTTTTTTGT+AGG | - | chr5.2:3539643-3539662 | MS.gene21617:intron | 30.0% |
| !!! | GACATTTTTCAAGGATACAA+GGG | + | chr5.2:3543122-3543141 | None:intergenic | 30.0% |
| AAATGGCTCATGCTTTCAAA+CGG | - | chr5.2:3543380-3543399 | MS.gene21617:intron | 35.0% | |
| AATCTGTTGAAAAAGCCTCA+TGG | + | chr5.2:3542062-3542081 | None:intergenic | 35.0% | |
| ACAGAAAAGGAAAAAGGATC+AGG | - | chr5.2:3541777-3541796 | MS.gene21617:CDS | 35.0% | |
| AGAAATAGCAAATGACTCTC+AGG | - | chr5.2:3541848-3541867 | MS.gene21617:CDS | 35.0% | |
| AGATCCCCGATAATTAAAGA+GGG | + | chr5.2:3540552-3540571 | None:intergenic | 35.0% | |
| AGGGTGCAGAGAAAAATTAT+AGG | - | chr5.2:3539876-3539895 | MS.gene21617:CDS | 35.0% | |
| ATATTGTACTTGACTACTGG+TGG | + | chr5.2:3540130-3540149 | None:intergenic | 35.0% | |
| ATCAAAAAGATGTGCCACAT+TGG | - | chr5.2:3540774-3540793 | MS.gene21617:intron | 35.0% | |
| ATCTGTTGAAAAAGCCTCAT+GGG | + | chr5.2:3542061-3542080 | None:intergenic | 35.0% | |
| ATGCTCCATTTAGTCCATTT+AGG | + | chr5.2:3540979-3540998 | None:intergenic | 35.0% | |
| ATTCTTGATTGCATCAGACT+CGG | + | chr5.2:3541808-3541827 | None:intergenic | 35.0% | |
| CAAAAACGTCGTTATAACCA+TGG | + | chr5.2:3542576-3542595 | None:intergenic | 35.0% | |
| CAAAAATGCAACAAAAAGGG+GGG | + | chr5.2:3543154-3543173 | None:intergenic | 35.0% | |
| CAAGAAAGATGACAATGTTG+AGG | - | chr5.2:3544245-3544264 | MS.gene21617:CDS | 35.0% | |
| CAGAAAACTATGAAACGCAT+CGG | - | chr5.2:3541453-3541472 | MS.gene21617:CDS | 35.0% | |
| CAGATATTGTACTTGACTAC+TGG | + | chr5.2:3540133-3540152 | None:intergenic | 35.0% | |
| CCTGAAGAAGCTGAAAAAAA+AGG | - | chr5.2:3541180-3541199 | MS.gene21617:intron | 35.0% | |
| CTAAATCCAAAGCATGACAA+TGG | + | chr5.2:3540011-3540030 | None:intergenic | 35.0% | |
| CTCAACATTGTCATCTTTCT+TGG | + | chr5.2:3544247-3544266 | None:intergenic | 35.0% | |
| CTTTCACCCAAGAACATAAA+TGG | + | chr5.2:3540317-3540336 | None:intergenic | 35.0% | |
| CTTTGAATCCAATGCATCTA+TGG | + | chr5.2:3544064-3544083 | None:intergenic | 35.0% | |
| GAAACATTCATCGTGACAAA+TGG | - | chr5.2:3541703-3541722 | MS.gene21617:CDS | 35.0% | |
| GAAGAAGCTGAAAAAAAAGG+CGG | - | chr5.2:3541183-3541202 | MS.gene21617:intron | 35.0% | |
| GCAGAGCTGTGATATAATTT+AGG | - | chr5.2:3540182-3540201 | MS.gene21617:intron | 35.0% | |
| GTGTTACGTTGATGTTGTAA+AGG | - | chr5.2:3540245-3540264 | MS.gene21617:intron | 35.0% | |
| TAGATAAACTCTCAGAACAC+TGG | - | chr5.2:3543357-3543376 | MS.gene21617:intron | 35.0% | |
| TCAAAAAGATGTGCCACATT+GGG | - | chr5.2:3540775-3540794 | MS.gene21617:intron | 35.0% | |
| TCAACTCTCCATTTAACAGA+CGG | + | chr5.2:3542716-3542735 | None:intergenic | 35.0% | |
| TCATTATTAACACAACTCCC+AGG | + | chr5.2:3541639-3541658 | None:intergenic | 35.0% | |
| TCTTGAAAAAACTTCCCATG+AGG | - | chr5.2:3542044-3542063 | MS.gene21617:CDS | 35.0% | |
| TGAACCATCTATTCCTGATT+TGG | - | chr5.2:3544197-3544216 | MS.gene21617:CDS | 35.0% | |
| TGCTCCATTTAGTCCATTTA+GGG | + | chr5.2:3540978-3540997 | None:intergenic | 35.0% | |
| TGTCATCTATTTGAGGGAAA+GGG | + | chr5.2:3543800-3543819 | None:intergenic | 35.0% | |
| TTCAAGATGCACAGATTCTA+AGG | - | chr5.2:3543831-3543850 | MS.gene21617:intron | 35.0% | |
| TTCGGAAACTGTTTGTTCAA+GGG | + | chr5.2:3541312-3541331 | None:intergenic | 35.0% | |
| TTCTCCCATTGATGTTTCAA+GGG | - | chr5.2:3541566-3541585 | MS.gene21617:intron | 35.0% | |
| TTCTTACTTCCCTTTCCTTA+AGG | - | chr5.2:3541937-3541956 | MS.gene21617:CDS | 35.0% | |
| TTGTTAGATGGAGCTGATAA+GGG | + | chr5.2:3540280-3540299 | None:intergenic | 35.0% | |
| TTTCGGAAACTGTTTGTTCA+AGG | + | chr5.2:3541313-3541332 | None:intergenic | 35.0% | |
| TTTCTCCCATTGATGTTTCA+AGG | - | chr5.2:3541565-3541584 | MS.gene21617:intron | 35.0% | |
| TTTGTTAGATGGAGCTGATA+AGG | + | chr5.2:3540281-3540300 | None:intergenic | 35.0% | |
| ! | AAGCATCTTTTATTGAGGAC+AGG | + | chr5.2:3543580-3543599 | None:intergenic | 35.0% |
| ! | AATCTAATTGCCGCAACTTT+TGG | + | chr5.2:3542098-3542117 | None:intergenic | 35.0% |
| ! | ATCGTTATTGCTATTGTCGT+TGG | + | chr5.2:3539418-3539437 | None:intergenic | 35.0% |
| ! | CATGCTTTGGATTTAGCATT+AGG | - | chr5.2:3540015-3540034 | MS.gene21617:intron | 35.0% |
| ! | CATGGTTATAACGACGTTTT+TGG | - | chr5.2:3542574-3542593 | MS.gene21617:intron | 35.0% |
| ! | GAAACAATGAGTTGGAATGT+TGG | - | chr5.2:3542345-3542364 | MS.gene21617:CDS | 35.0% |
| ! | GGTTTTTGTTCTTTATCCTC+AGG | + | chr5.2:3539689-3539708 | None:intergenic | 35.0% |
| ! | TAAATGGAGCGTTTGTTAGA+TGG | + | chr5.2:3540292-3540311 | None:intergenic | 35.0% |
| ! | TACGAATCGTTTGAGTTTGA+TGG | - | chr5.2:3539549-3539568 | MS.gene21617:CDS | 35.0% |
| ! | TAGGGTTTAGAATGCATGAA+AGG | + | chr5.2:3539845-3539864 | None:intergenic | 35.0% |
| ! | TCAAATTTTGCAGTGGAAGA+TGG | + | chr5.2:3544105-3544124 | None:intergenic | 35.0% |
| ! | TCTAAAGCTATAGGACACAT+TGG | + | chr5.2:3543942-3543961 | None:intergenic | 35.0% |
| ! | TCTGATTTGTATGGTCAAGT+TGG | - | chr5.2:3540622-3540641 | MS.gene21617:intron | 35.0% |
| ! | TGAATGCTGCTAGCTTAAAT+TGG | + | chr5.2:3542885-3542904 | None:intergenic | 35.0% |
| ! | TTATAGTTTTCACCGTGATG+AGG | - | chr5.2:3541242-3541261 | MS.gene21617:intron | 35.0% |
| !! | AAACCAAGCTCTAAAGCTAT+AGG | + | chr5.2:3543951-3543970 | None:intergenic | 35.0% |
| !! | AAATGGACTAAATGGAGCAT+TGG | - | chr5.2:3540979-3540998 | MS.gene21617:intron | 35.0% |
| !! | AAGACCCTAAATGGACTAAA+TGG | - | chr5.2:3540971-3540990 | MS.gene21617:intron | 35.0% |
| !! | CATTTGGAACTTTTTCTAGG+GGG | - | chr5.2:3543073-3543092 | MS.gene21617:intron | 35.0% |
| !! | GAGCATTTGGAACTTTTTCT+AGG | - | chr5.2:3543070-3543089 | MS.gene21617:intron | 35.0% |
| !! | GCATTTGGAACTTTTTCTAG+GGG | - | chr5.2:3543072-3543091 | MS.gene21617:intron | 35.0% |
| !! | TAAATGGAGCATTGGCTAAA+TGG | - | chr5.2:3540987-3541006 | MS.gene21617:intron | 35.0% |
| !!! | CCTTTTTTTTCAGCTTCTTC+AGG | + | chr5.2:3541183-3541202 | None:intergenic | 35.0% |
| !!! | CGACATTTTTCAAGGATACA+AGG | + | chr5.2:3543123-3543142 | None:intergenic | 35.0% |
| !!! | GTTGCTACATTTTAAGGTGT+GGG | - | chr5.2:3542215-3542234 | MS.gene21617:CDS | 35.0% |
| !!! | TGTTGCTACATTTTAAGGTG+TGG | - | chr5.2:3542214-3542233 | MS.gene21617:CDS | 35.0% |
| AACTCTCAGAACACTGGAAA+TGG | - | chr5.2:3543363-3543382 | MS.gene21617:intron | 40.0% | |
| AAGAGGATTGGATGTGACAA+TGG | + | chr5.2:3542517-3542536 | None:intergenic | 40.0% | |
| AAGGAAAGGGAAGTAAGAAC+AGG | + | chr5.2:3541936-3541955 | None:intergenic | 40.0% | |
| AATCTGTGCATCTTGAACAG+CGG | + | chr5.2:3543828-3543847 | None:intergenic | 40.0% | |
| ACACATTCCAGCTGAAGAAA+AGG | + | chr5.2:3543991-3544010 | None:intergenic | 40.0% | |
| AGCTATGGATTCGTTTGTGA+TGG | + | chr5.2:3540515-3540534 | None:intergenic | 40.0% | |
| CATTCATCGTGACAAATGGT+TGG | - | chr5.2:3541707-3541726 | MS.gene21617:CDS | 40.0% | |
| CCAAAGCATGACAATGGAAA+CGG | + | chr5.2:3540005-3540024 | None:intergenic | 40.0% | |
| CCGATGAAAGTAACGATGTT+GGG | - | chr5.2:3540585-3540604 | MS.gene21617:intron | 40.0% | |
| CGAATTCGATATCGAATCTC+AGG | - | chr5.2:3540699-3540718 | MS.gene21617:intron | 40.0% | |
| CTCTCCCCTCTTTAATTATC+GGG | - | chr5.2:3540544-3540563 | MS.gene21617:intron | 40.0% | |
| CTGGAAATCGTGTGATACAA+GGG | - | chr5.2:3541212-3541231 | MS.gene21617:intron | 40.0% | |
| CTGTCATCTATTTGAGGGAA+AGG | + | chr5.2:3543801-3543820 | None:intergenic | 40.0% | |
| CTTCATTTCATTCAGCTGAC+AGG | + | chr5.2:3542833-3542852 | None:intergenic | 40.0% | |
| CTTTCATCGGAGAAAAATCC+AGG | + | chr5.2:3540575-3540594 | None:intergenic | 40.0% | |
| GACGGAAGAGGAAACATATT+TGG | + | chr5.2:3540419-3540438 | None:intergenic | 40.0% | |
| GAGATCCCCGATAATTAAAG+AGG | + | chr5.2:3540553-3540572 | None:intergenic | 40.0% | |
| GAGTGATCATAAGAGAGAAG+AGG | - | chr5.2:3540852-3540871 | MS.gene21617:CDS | 40.0% | |
| GATAATTAAAGAGGGGAGAG+CGG | + | chr5.2:3540544-3540563 | None:intergenic | 40.0% | |
| GATCCCCGATAATTAAAGAG+GGG | + | chr5.2:3540551-3540570 | None:intergenic | 40.0% | |
| GCTCTCCCCTCTTTAATTAT+CGG | - | chr5.2:3540543-3540562 | MS.gene21617:intron | 40.0% | |
| GGCATCTGTCATCTATTTGA+GGG | + | chr5.2:3543806-3543825 | None:intergenic | 40.0% | |
| GTACTTTAGTGGCAGCATAA+TGG | - | chr5.2:3541134-3541153 | MS.gene21617:intron | 40.0% | |
| GTCTGTTATGCATAAGTGTG+TGG | - | chr5.2:3541275-3541294 | MS.gene21617:intron | 40.0% | |
| TCAGTTCATCATTACCACTG+CGG | + | chr5.2:3542642-3542661 | None:intergenic | 40.0% | |
| TCCGATGAAAGTAACGATGT+TGG | - | chr5.2:3540584-3540603 | MS.gene21617:intron | 40.0% | |
| TCCTCCCTTGAAACATCAAT+GGG | + | chr5.2:3541573-3541592 | None:intergenic | 40.0% | |
| TCTCCCCTCTTTAATTATCG+GGG | - | chr5.2:3540545-3540564 | MS.gene21617:intron | 40.0% | |
| TCTTCCATCAAGACCCTAAA+TGG | - | chr5.2:3540962-3540981 | MS.gene21617:intron | 40.0% | |
| TGAAGATGTTCAGAAGAAGC+TGG | - | chr5.2:3544122-3544141 | MS.gene21617:CDS | 40.0% | |
| TGCGAAGGAAGAAGAGAAAA+AGG | - | chr5.2:3539443-3539462 | MS.gene21617:CDS | 40.0% | |
| TGCTGAGGAAAAAACCAAGA+AGG | - | chr5.2:3543678-3543697 | MS.gene21617:intron | 40.0% | |
| TGTTAGATGGAGCTGATAAG+GGG | + | chr5.2:3540279-3540298 | None:intergenic | 40.0% | |
| TTAATCTCAAGGTCAGAAGC+TGG | - | chr5.2:3542118-3542137 | MS.gene21617:CDS | 40.0% | |
| TTATGCATAACAGACTCTGC+AGG | + | chr5.2:3541270-3541289 | None:intergenic | 40.0% | |
| TTTAATTATCGGGGATCTCC+TGG | - | chr5.2:3540554-3540573 | MS.gene21617:intron | 40.0% | |
| TTTCAAGGATACAAGGGAAG+AGG | + | chr5.2:3543116-3543135 | None:intergenic | 40.0% | |
| ! | AAGATGCACAGATTCTAAGG+TGG | - | chr5.2:3543834-3543853 | MS.gene21617:intron | 40.0% |
| ! | AATTGTAGTGGGAGAAAGGA+AGG | + | chr5.2:3543739-3543758 | None:intergenic | 40.0% |
| ! | ACAAAGGGTGTATGACACTT+TGG | - | chr5.2:3541359-3541378 | MS.gene21617:intron | 40.0% |
| ! | ACACTTTGGAAAGGAAACTC+TGG | - | chr5.2:3541373-3541392 | MS.gene21617:intron | 40.0% |
| ! | CCCAACATCGTTACTTTCAT+CGG | + | chr5.2:3540588-3540607 | None:intergenic | 40.0% |
| ! | CTACGTGAATGTTTTCTGCA+AGG | + | chr5.2:3543249-3543268 | None:intergenic | 40.0% |
| ! | GATGACCTCTCTAAGAAAAC+AGG | - | chr5.2:3544174-3544193 | MS.gene21617:CDS | 40.0% |
| ! | GCACCCTCAACAACATTTTA+GGG | + | chr5.2:3539863-3539882 | None:intergenic | 40.0% |
| ! | GGTTTAGAATGCATGAAAGG+AGG | + | chr5.2:3539842-3539861 | None:intergenic | 40.0% |
| ! | GTTCACCTGTTTTCTTAGAG+AGG | + | chr5.2:3544182-3544201 | None:intergenic | 40.0% |
| ! | TAGTCCATTTAGGGTCTTGA+TGG | + | chr5.2:3540969-3540988 | None:intergenic | 40.0% |
| ! | TGCACCCTCAACAACATTTT+AGG | + | chr5.2:3539864-3539883 | None:intergenic | 40.0% |
| ! | TTCCTTATCAGCCTGTCTTT+TGG | + | chr5.2:3544271-3544290 | None:intergenic | 40.0% |
| !! | AGATGCACAGATTCTAAGGT+GGG | - | chr5.2:3543835-3543854 | MS.gene21617:intron | 40.0% |
| !! | TGCATGTGTTGTTTCTCATC+AGG | + | chr5.2:3543706-3543725 | None:intergenic | 40.0% |
| !! | TGTCCTATAGCTTTAGAGCT+TGG | - | chr5.2:3543945-3543964 | MS.gene21617:intron | 40.0% |
| !! | TTTGGCTTGCGAAATCAATG+TGG | - | chr5.2:3542545-3542564 | MS.gene21617:intron | 40.0% |
| !!! | ATGTCATTTTTTCTCCGCAG+TGG | - | chr5.2:3542625-3542644 | MS.gene21617:intron | 40.0% |
| AAAAAAAAGGCGGTGGAAGC+TGG | - | chr5.2:3541193-3541212 | MS.gene21617:intron | 45.0% | |
| AAAAGATGTGCCACATTGGG+AGG | - | chr5.2:3540778-3540797 | MS.gene21617:intron | 45.0% | |
| AAATCAATGTGGCAGCACCA+TGG | - | chr5.2:3542556-3542575 | MS.gene21617:intron | 45.0% | |
| AAATGCAACAAAAAGGGGGG+AGG | + | chr5.2:3543151-3543170 | None:intergenic | 45.0% | |
| AATGCAACAAAAAGGGGGGA+GGG | + | chr5.2:3543150-3543169 | None:intergenic | 45.0% | |
| AGCAAATGACTCTCAGGACA+AGG | - | chr5.2:3541854-3541873 | MS.gene21617:CDS | 45.0% | |
| ATAGGACACATTGGTCCGTT+TGG | + | chr5.2:3543933-3543952 | None:intergenic | 45.0% | |
| ATCCTGGCTTCATCGTACAA+AGG | - | chr5.2:3541343-3541362 | MS.gene21617:intron | 45.0% | |
| ATCGTGACAAATGGTTGGAG+AGG | - | chr5.2:3541712-3541731 | MS.gene21617:CDS | 45.0% | |
| ATCTGGCCACACAAAAGACT+CGG | + | chr5.2:3542001-3542020 | None:intergenic | 45.0% | |
| ATCTGTGCATCTTGAACAGC+GGG | + | chr5.2:3543827-3543846 | None:intergenic | 45.0% | |
| ATTATCAGTCCAGCAACGCT+TGG | + | chr5.2:3540735-3540754 | None:intergenic | 45.0% | |
| ATTCCAAGCCTGAAACACCT+GGG | - | chr5.2:3541619-3541638 | MS.gene21617:intron | 45.0% | |
| CAAAAACACCGCAAGAGGAT+TGG | + | chr5.2:3542529-3542548 | None:intergenic | 45.0% | |
| CAAGCTCGTCAATTTCTTGC+TGG | + | chr5.2:3541431-3541450 | None:intergenic | 45.0% | |
| CAATAACGATAGCGATGCGA+AGG | - | chr5.2:3539428-3539447 | MS.gene21617:CDS | 45.0% | |
| CAATGTTGAGGCCAAAAGAC+AGG | - | chr5.2:3544257-3544276 | MS.gene21617:CDS | 45.0% | |
| CATTGATGTTTCAAGGGAGG+AGG | - | chr5.2:3541572-3541591 | MS.gene21617:intron | 45.0% | |
| CCGTTTCCATTGTCATGCTT+TGG | - | chr5.2:3540002-3540021 | MS.gene21617:intron | 45.0% | |
| CTCCTCCCTTGAAACATCAA+TGG | + | chr5.2:3541574-3541593 | None:intergenic | 45.0% | |
| CTTTAGTGGCAGCATAATGG+TGG | - | chr5.2:3541137-3541156 | MS.gene21617:intron | 45.0% | |
| GAAGCTGAAAAAAAAGGCGG+TGG | - | chr5.2:3541186-3541205 | MS.gene21617:intron | 45.0% | |
| GCAAATGACTCTCAGGACAA+GGG | - | chr5.2:3541855-3541874 | MS.gene21617:CDS | 45.0% | |
| GCTGACTGATAAGGACTATG+AGG | - | chr5.2:3541398-3541417 | MS.gene21617:intron | 45.0% | |
| GCTGGAAATCGTGTGATACA+AGG | - | chr5.2:3541211-3541230 | MS.gene21617:intron | 45.0% | |
| GGGCATCTGTCATCTATTTG+AGG | + | chr5.2:3543807-3543826 | None:intergenic | 45.0% | |
| GGTACGAGATTGTCTAGATG+TGG | - | chr5.2:3542776-3542795 | MS.gene21617:intron | 45.0% | |
| GTCTTCTTCGTCATCACTTG+TGG | + | chr5.2:3539313-3539332 | None:intergenic | 45.0% | |
| GTGTTTCAGGCTTGGAATGT+TGG | + | chr5.2:3541617-3541636 | None:intergenic | 45.0% | |
| TCCCATTGATGTTTCAAGGG+AGG | - | chr5.2:3541569-3541588 | MS.gene21617:intron | 45.0% | |
| TCCTGGCTTCATCGTACAAA+GGG | - | chr5.2:3541344-3541363 | MS.gene21617:intron | 45.0% | |
| TGTCACATCCAATCCTCTTG+CGG | - | chr5.2:3542518-3542537 | MS.gene21617:intron | 45.0% | |
| TTGAGGGAGATTATCCATGC+TGG | - | chr5.2:3543859-3543878 | MS.gene21617:CDS | 45.0% | |
| TTGTACTTGACTACTGGTGG+TGG | + | chr5.2:3540127-3540146 | None:intergenic | 45.0% | |
| TTTCTCATCAGGCTCCTTCT+TGG | + | chr5.2:3543695-3543714 | None:intergenic | 45.0% | |
| ! | ACTCTGGAAGCTGACTGATA+AGG | - | chr5.2:3541389-3541408 | MS.gene21617:intron | 45.0% |
| ! | AGAGTTCCGAGTCTTTTGTG+TGG | - | chr5.2:3541992-3542011 | MS.gene21617:CDS | 45.0% |
| ! | AGGGTGGTCGACATTTTTCA+AGG | + | chr5.2:3543131-3543150 | None:intergenic | 45.0% |
| ! | CAATCCTCTTGCGGTGTTTT+TGG | - | chr5.2:3542527-3542546 | MS.gene21617:intron | 45.0% |
| ! | CCAGGATGTTGCTTACGTTT+CGG | + | chr5.2:3541330-3541349 | None:intergenic | 45.0% |
| ! | GGGTGTATGACACTTTGGAA+AGG | - | chr5.2:3541364-3541383 | MS.gene21617:intron | 45.0% |
| ! | TATCTGTTTCCAAGCGTTGC+TGG | - | chr5.2:3540723-3540742 | MS.gene21617:intron | 45.0% |
| ! | TCCTTTTCCCGAAACCCTAA+GGG | + | chr5.2:3539511-3539530 | None:intergenic | 45.0% |
| ! | TGCACTGACCATAGATGCAT+TGG | - | chr5.2:3544053-3544072 | MS.gene21617:CDS | 45.0% |
| ! | TGTTCTGCCTTTTCTTCAGC+TGG | - | chr5.2:3543981-3544000 | MS.gene21617:intron | 45.0% |
| ! | TTCCTTTTCCCGAAACCCTA+AGG | + | chr5.2:3539512-3539531 | None:intergenic | 45.0% |
| !! | AGATTCTAAGGTGGGCTTGA+GGG | - | chr5.2:3543843-3543862 | MS.gene21617:intron | 45.0% |
| !! | GAACTTTTTCTAGGGGGAAG+TGG | - | chr5.2:3543079-3543098 | MS.gene21617:intron | 45.0% |
| !! | TTGCGAAGCTTTGAATGCTG+AGG | + | chr5.2:3539351-3539370 | None:intergenic | 45.0% |
| !! | TTTGCATCCTCTGGAGTTTG+AGG | + | chr5.2:3539474-3539493 | None:intergenic | 45.0% |
| !! | AATAATTATAATTATTTCAA+GGG | + | chr5.2:3542166-3542185 | None:intergenic | 5.0% |
| !! | TAATAATTATAATTATTTCA+AGG | + | chr5.2:3542167-3542186 | None:intergenic | 5.0% |
| !!! | ATAAAATTTATGTTTTATTT+GGG | - | chr5.2:3541887-3541906 | MS.gene21617:CDS | 5.0% |
| !!! | TATAAAATTTATGTTTTATT+TGG | - | chr5.2:3541886-3541905 | MS.gene21617:CDS | 5.0% |
| AACGGTCATCATGTCCAGCA+TGG | + | chr5.2:3543876-3543895 | None:intergenic | 50.0% | |
| ACACAACTCCCAGGTGTTTC+AGG | + | chr5.2:3541630-3541649 | None:intergenic | 50.0% | |
| ACCCTAAGGGGTTCACCAAT+CGG | + | chr5.2:3539498-3539517 | None:intergenic | 50.0% | |
| ACCCTTTGTACGATGAAGCC+AGG | + | chr5.2:3541348-3541367 | None:intergenic | 50.0% | |
| ACTCTGCAGGAACCTCATCA+CGG | + | chr5.2:3541257-3541276 | None:intergenic | 50.0% | |
| AGATGGAGCTGATAAGGGGA+GGG | + | chr5.2:3540275-3540294 | None:intergenic | 50.0% | |
| AGGGTTTCGGGAAAAGGAAG+AGG | - | chr5.2:3539513-3539532 | MS.gene21617:CDS | 50.0% | |
| ATGGCTGAAACAGCAGCATC+TGG | + | chr5.2:3542018-3542037 | None:intergenic | 50.0% | |
| CAAGCCAAAAACACCGCAAG+AGG | + | chr5.2:3542534-3542553 | None:intergenic | 50.0% | |
| CATTCCAAGCCTGAAACACC+TGG | - | chr5.2:3541618-3541637 | MS.gene21617:intron | 50.0% | |
| CCGAAACGTAAGCAACATCC+TGG | - | chr5.2:3541327-3541346 | MS.gene21617:intron | 50.0% | |
| CTAGCACGCCGTCTGTTAAA+TGG | - | chr5.2:3542705-3542724 | MS.gene21617:intron | 50.0% | |
| CTTGCCAAATGACTTCTGGG+CGG | + | chr5.2:3544223-3544242 | None:intergenic | 50.0% | |
| GATGTTTCAAGGGAGGAGGA+AGG | - | chr5.2:3541576-3541595 | MS.gene21617:intron | 50.0% | |
| GCGGCCAAATCAGGAATAGA+TGG | + | chr5.2:3544204-3544223 | None:intergenic | 50.0% | |
| GGATTCGTTTGTGATGGCAG+CGG | + | chr5.2:3540509-3540528 | None:intergenic | 50.0% | |
| GGCATACCAGGAATTACCAC+AGG | + | chr5.2:3544016-3544035 | None:intergenic | 50.0% | |
| GGCCAAAAGACAGGCTGATA+AGG | - | chr5.2:3544266-3544285 | MS.gene21617:CDS | 50.0% | |
| GGCGAGACAAAGATGAGAAG+AGG | + | chr5.2:3540488-3540507 | None:intergenic | 50.0% | |
| GGGCTTGCCAAATGACTTCT+GGG | + | chr5.2:3544226-3544245 | None:intergenic | 50.0% | |
| GGGTCTTGATGGAAGACATG+TGG | + | chr5.2:3540958-3540977 | None:intergenic | 50.0% | |
| GGGTTTCGGGAAAAGGAAGA+GGG | - | chr5.2:3539514-3539533 | MS.gene21617:CDS | 50.0% | |
| GTGTTGCCTGTGGTAATTCC+TGG | - | chr5.2:3544007-3544026 | MS.gene21617:CDS | 50.0% | |
| GTTCTTGGGTGAAAGCCATG+TGG | - | chr5.2:3540322-3540341 | MS.gene21617:intron | 50.0% | |
| TAGATGGAGCTGATAAGGGG+AGG | + | chr5.2:3540276-3540295 | None:intergenic | 50.0% | |
| TCAGTGCAGACACCTCATCA+CGG | + | chr5.2:3544041-3544060 | None:intergenic | 50.0% | |
| TCCTCAGGCACAAGCATTAC+AGG | + | chr5.2:3539674-3539693 | None:intergenic | 50.0% | |
| TCCTGTAATGCTTGTGCCTG+AGG | - | chr5.2:3539670-3539689 | MS.gene21617:intron | 50.0% | |
| TGGACATGATGACCGTTACC+AGG | - | chr5.2:3543879-3543898 | MS.gene21617:CDS | 50.0% | |
| TGGGCTTGCCAAATGACTTC+TGG | + | chr5.2:3544227-3544246 | None:intergenic | 50.0% | |
| TGGTGAACCCCTTAGGGTTT+CGG | - | chr5.2:3539500-3539519 | MS.gene21617:CDS | 50.0% | |
| TTTCGGGAAAAGGAAGAGGG+AGG | - | chr5.2:3539517-3539536 | MS.gene21617:CDS | 50.0% | |
| ! | AGAAAGCGCAACACAGTGAG+AGG | + | chr5.2:3540463-3540482 | None:intergenic | 50.0% |
| ! | AGCTGAGTTTTCAGAGCCAC+GGG | + | chr5.2:3544154-3544173 | None:intergenic | 50.0% |
| ! | CAGCTGAGTTTTCAGAGCCA+CGG | + | chr5.2:3544155-3544174 | None:intergenic | 50.0% |
| ! | CCTTTTCCCGAAACCCTAAG+GGG | + | chr5.2:3539510-3539529 | None:intergenic | 50.0% |
| !! | AGCTTTGAATGCTGAGGTGG+CGG | + | chr5.2:3539345-3539364 | None:intergenic | 50.0% |
| !! | CAGATTCTAAGGTGGGCTTG+AGG | - | chr5.2:3543842-3543861 | MS.gene21617:intron | 50.0% |
| !! | CGAAGCTTTGAATGCTGAGG+TGG | + | chr5.2:3539348-3539367 | None:intergenic | 50.0% |
| AAGCGCAACACAGTGAGAGG+AGG | + | chr5.2:3540460-3540479 | None:intergenic | 55.0% | |
| ACACAGTGAGAGGAGGTTGG+CGG | + | chr5.2:3540453-3540472 | None:intergenic | 55.0% | |
| ACTCCCAGGTGTTTCAGGCT+TGG | + | chr5.2:3541625-3541644 | None:intergenic | 55.0% | |
| AGCCGATTGGTGAACCCCTT+AGG | - | chr5.2:3539493-3539512 | MS.gene21617:CDS | 55.0% | |
| AGTGGCAGCATAATGGTGGC+TGG | - | chr5.2:3541141-3541160 | MS.gene21617:intron | 55.0% | |
| ATGTCCTCCTGAACAGCAGG+AGG | + | chr5.2:3541510-3541529 | None:intergenic | 55.0% | |
| CAGCTGGAATGTGTTGCCTG+TGG | - | chr5.2:3543997-3544016 | MS.gene21617:CDS | 55.0% | |
| CAGTGCAGACACCTCATCAC+GGG | + | chr5.2:3544040-3544059 | None:intergenic | 55.0% | |
| CCACATTGGGAGGTTCAAGG+CGG | - | chr5.2:3540788-3540807 | MS.gene21617:intron | 55.0% | |
| CCAGAGGATGCAAAGCCGAT+TGG | - | chr5.2:3539480-3539499 | MS.gene21617:CDS | 55.0% | |
| CCCCTTAGGGTTTCGGGAAA+AGG | - | chr5.2:3539507-3539526 | MS.gene21617:CDS | 55.0% | |
| CTCTCAGGACAAGGGTCAGA+AGG | - | chr5.2:3541863-3541882 | MS.gene21617:CDS | 55.0% | |
| GCAACACAGTGAGAGGAGGT+TGG | + | chr5.2:3540456-3540475 | None:intergenic | 55.0% | |
| GCATAATGGTGGCTGGACAG+TGG | - | chr5.2:3541148-3541167 | MS.gene21617:intron | 55.0% | |
| GCCGATTGGTGAACCCCTTA+GGG | - | chr5.2:3539494-3539513 | MS.gene21617:CDS | 55.0% | |
| GGATTCGCCTCAAACTCCAG+AGG | - | chr5.2:3539464-3539483 | MS.gene21617:CDS | 55.0% | |
| GGTGAACCCCTTAGGGTTTC+GGG | - | chr5.2:3539501-3539520 | MS.gene21617:CDS | 55.0% | |
| GTCATGTCCTCCTGAACAGC+AGG | + | chr5.2:3541513-3541532 | None:intergenic | 55.0% | |
| GTGCCACATTGGGAGGTTCA+AGG | - | chr5.2:3540785-3540804 | MS.gene21617:intron | 55.0% | |
| TCAGGAGGGTTTGACTGCTG+AGG | - | chr5.2:3543663-3543682 | MS.gene21617:intron | 55.0% | |
| TGTCCTCCTGAACAGCAGGA+GGG | + | chr5.2:3541509-3541528 | None:intergenic | 55.0% | |
| TTGGCCGCCCAGAAGTCATT+TGG | - | chr5.2:3544216-3544235 | MS.gene21617:CDS | 55.0% | |
| ! | CCAATCGGCTTTGCATCCTC+TGG | + | chr5.2:3539483-3539502 | None:intergenic | 55.0% |
| ! | CTGAGTTTTCAGAGCCACGG+GGG | + | chr5.2:3544152-3544171 | None:intergenic | 55.0% |
| ! | GCTGAGTTTTCAGAGCCACG+GGG | + | chr5.2:3544153-3544172 | None:intergenic | 55.0% |
| ! | TTTGAATGCTGAGGTGGCGG+TGG | + | chr5.2:3539342-3539361 | None:intergenic | 55.0% |
| !! | ACTACTGGTGGTGGTCCTGA+TGG | + | chr5.2:3540118-3540137 | None:intergenic | 55.0% |
| ACAGCAGGAGGGGCTTCTTC+AGG | + | chr5.2:3541498-3541517 | None:intergenic | 60.0% | |
| AGAAGCCCCTCCTGCTGTTC+AGG | - | chr5.2:3541500-3541519 | MS.gene21617:CDS | 60.0% | |
| ATTGGGAGGTTCAAGGCGGC+GGG | - | chr5.2:3540792-3540811 | MS.gene21617:intron | 60.0% | |
| CATTGGGAGGTTCAAGGCGG+CGG | - | chr5.2:3540791-3540810 | MS.gene21617:intron | 60.0% | |
| CCGCCTTGAACCTCCCAATG+TGG | + | chr5.2:3540791-3540810 | None:intergenic | 60.0% | |
| CTGGTATGCCTCCCGTGATG+AGG | - | chr5.2:3544026-3544045 | MS.gene21617:CDS | 60.0% | |
| GAATCGGCGCTTCACTCAGG+TGG | - | chr5.2:3539287-3539306 | MS.gene21617:CDS | 60.0% | |
| GACTTCTGGGCGGCCAAATC+AGG | + | chr5.2:3544213-3544232 | None:intergenic | 60.0% | |
| GCAACAAAAAGGGGGGAGGG+TGG | + | chr5.2:3543147-3543166 | None:intergenic | 60.0% | |
| GGTGAATCGGCGCTTCACTC+AGG | - | chr5.2:3539284-3539303 | MS.gene21617:CDS | 60.0% | |
| GTCCTCCTGAACAGCAGGAG+GGG | + | chr5.2:3541508-3541527 | None:intergenic | 60.0% | |
| TGCAGACACCTCATCACGGG+AGG | + | chr5.2:3544037-3544056 | None:intergenic | 60.0% | |
| ! | CTCATCACGGGAGGCATACC+AGG | + | chr5.2:3544028-3544047 | None:intergenic | 60.0% |
| !! | AGGTTCAAGGCGGTGGGCTA+CGG | - | chr5.2:3540818-3540837 | MS.gene21617:CDS | 60.0% |
| AAGAAGCTGGTGAGCCCCCG+TGG | - | chr5.2:3544135-3544154 | MS.gene21617:CDS | 65.0% | |
| AGCCCCTCCTGCTGTTCAGG+AGG | - | chr5.2:3541503-3541522 | MS.gene21617:CDS | 65.0% | |
| GAGAGGAGGTTGGCGGCGAT+GGG | + | chr5.2:3540446-3540465 | None:intergenic | 65.0% | |
| GGAGAGCGGCGACAGAGCTA+TGG | + | chr5.2:3540530-3540549 | None:intergenic | 65.0% | |
| GGGAGGAGGTTCAAGGCGGT+GGG | - | chr5.2:3540812-3540831 | MS.gene21617:CDS | 65.0% | |
| TGAGAGGAGGTTGGCGGCGA+TGG | + | chr5.2:3540447-3540466 | None:intergenic | 65.0% | |
| !! | TTCAAGGCGGTGGGCTACGG+TGG | - | chr5.2:3540821-3540840 | MS.gene21617:CDS | 65.0% |
| AGGCGGCGGGAGGAGGTTCA+AGG | - | chr5.2:3540805-3540824 | MS.gene21617:CDS | 70.0% | |
| AGGTTCAAGGCGGCGGGAGG+AGG | - | chr5.2:3540798-3540817 | MS.gene21617:intron | 70.0% | |
| CGGCGGGAGGAGGTTCAAGG+CGG | - | chr5.2:3540808-3540827 | MS.gene21617:CDS | 70.0% | |
| CGGGAGGAGGTTCAAGGCGG+TGG | - | chr5.2:3540811-3540830 | MS.gene21617:CDS | 70.0% | |
| GCGATGGGCAGCGACGGAAG+AGG | + | chr5.2:3540431-3540450 | None:intergenic | 70.0% | |
| TTGGCGGCGATGGGCAGCGA+CGG | + | chr5.2:3540437-3540456 | None:intergenic | 70.0% | |
| GGGAGGTTCAAGGCGGCGGG+AGG | - | chr5.2:3540795-3540814 | MS.gene21617:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 3539282 | 3544293 | 3539282 | ID=MS.gene21617 |
| chr5.2 | mRNA | 3539282 | 3544293 | 3539282 | ID=MS.gene21617.t1;Parent=MS.gene21617 |
| chr5.2 | exon | 3543988 | 3544293 | 3543988 | ID=MS.gene21617.t1.exon1;Parent=MS.gene21617.t1 |
| chr5.2 | CDS | 3543988 | 3544293 | 3543988 | ID=cds.MS.gene21617.t1;Parent=MS.gene21617.t1 |
| chr5.2 | exon | 3543848 | 3543910 | 3543848 | ID=MS.gene21617.t1.exon2;Parent=MS.gene21617.t1 |
| chr5.2 | CDS | 3543848 | 3543910 | 3543848 | ID=cds.MS.gene21617.t1;Parent=MS.gene21617.t1 |
| chr5.2 | exon | 3541691 | 3542452 | 3541691 | ID=MS.gene21617.t1.exon3;Parent=MS.gene21617.t1 |
| chr5.2 | CDS | 3541691 | 3542452 | 3541691 | ID=cds.MS.gene21617.t1;Parent=MS.gene21617.t1 |
| chr5.2 | exon | 3541447 | 3541581 | 3541447 | ID=MS.gene21617.t1.exon4;Parent=MS.gene21617.t1 |
| chr5.2 | CDS | 3541447 | 3541581 | 3541447 | ID=cds.MS.gene21617.t1;Parent=MS.gene21617.t1 |
| chr5.2 | exon | 3540799 | 3540882 | 3540799 | ID=MS.gene21617.t1.exon5;Parent=MS.gene21617.t1 |
| chr5.2 | CDS | 3540799 | 3540882 | 3540799 | ID=cds.MS.gene21617.t1;Parent=MS.gene21617.t1 |
| chr5.2 | exon | 3539849 | 3539908 | 3539849 | ID=MS.gene21617.t1.exon6;Parent=MS.gene21617.t1 |
| chr5.2 | CDS | 3539849 | 3539908 | 3539849 | ID=cds.MS.gene21617.t1;Parent=MS.gene21617.t1 |
| chr5.2 | exon | 3539675 | 3539761 | 3539675 | ID=MS.gene21617.t1.exon7;Parent=MS.gene21617.t1 |
| chr5.2 | CDS | 3539675 | 3539761 | 3539675 | ID=cds.MS.gene21617.t1;Parent=MS.gene21617.t1 |
| chr5.2 | exon | 3539282 | 3539575 | 3539282 | ID=MS.gene21617.t1.exon8;Parent=MS.gene21617.t1 |
| chr5.2 | CDS | 3539282 | 3539575 | 3539282 | ID=cds.MS.gene21617.t1;Parent=MS.gene21617.t1 |
| Gene Sequence |
| Protein sequence |
