Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21760.t1 | XP_003610850.1 | 93.9 | 539 | 32 | 1 | 1 | 538 | 1 | 539 | 1.00E-265 | 925.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21760.t1 | Q9LW77 | 77.7 | 413 | 87 | 3 | 1 | 409 | 1 | 412 | 1.8e-173 | 610.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21760.t1 | G7K6H0 | 93.9 | 539 | 32 | 1 | 1 | 538 | 1 | 539 | 7.4e-266 | 925.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31164 | MS.gene21760 | PPI |
| MS.gene052128 | MS.gene21760 | PPI |
| MS.gene21760 | MS.gene30950 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21760.t1 | MTR_5g007710 | 97.032 | 539 | 15 | 1 | 1 | 538 | 1 | 539 | 0.0 | 1089 |
| MS.gene21760.t1 | MTR_5g007710 | 98.276 | 406 | 7 | 0 | 1 | 406 | 1 | 406 | 0.0 | 833 |
| MS.gene21760.t1 | MTR_4g077800 | 73.734 | 533 | 105 | 5 | 1 | 526 | 1 | 505 | 0.0 | 773 |
| MS.gene21760.t1 | MTR_4g077800 | 76.190 | 504 | 96 | 5 | 1 | 497 | 1 | 487 | 0.0 | 760 |
| MS.gene21760.t1 | MTR_3g007760 | 27.838 | 370 | 207 | 11 | 29 | 356 | 57 | 408 | 3.45e-30 | 125 |
| MS.gene21760.t1 | MTR_3g007760 | 27.434 | 339 | 192 | 10 | 62 | 356 | 57 | 385 | 7.72e-28 | 117 |
| MS.gene21760.t1 | MTR_4g077703 | 44.706 | 85 | 33 | 2 | 411 | 490 | 25 | 100 | 4.06e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21760.t1 | AT3G16090 | 65.283 | 530 | 135 | 8 | 1 | 526 | 1 | 485 | 0.0 | 671 |
| MS.gene21760.t1 | AT1G65040 | 72.488 | 418 | 111 | 2 | 1 | 414 | 1 | 418 | 0.0 | 632 |
| MS.gene21760.t1 | AT1G65040 | 69.139 | 418 | 102 | 3 | 1 | 414 | 1 | 395 | 0.0 | 590 |
| MS.gene21760.t1 | AT1G65040 | 71.382 | 304 | 83 | 2 | 115 | 414 | 44 | 347 | 1.63e-157 | 454 |
| MS.gene21760.t1 | AT1G65040 | 66.667 | 300 | 73 | 3 | 119 | 414 | 1 | 277 | 2.24e-138 | 403 |
| MS.gene21760.t1 | AT1G65040 | 71.967 | 239 | 63 | 2 | 180 | 414 | 1 | 239 | 2.24e-121 | 358 |
| MS.gene21760.t1 | AT1G65040 | 72.727 | 231 | 60 | 1 | 176 | 403 | 23 | 253 | 2.29e-121 | 357 |
| MS.gene21760.t1 | AT4G25230 | 28.649 | 370 | 211 | 9 | 4 | 330 | 20 | 379 | 1.02e-28 | 120 |
| MS.gene21760.t1 | AT4G25230 | 28.649 | 370 | 211 | 9 | 4 | 330 | 20 | 379 | 1.02e-28 | 120 |
| MS.gene21760.t1 | AT4G25230 | 28.649 | 370 | 211 | 9 | 4 | 330 | 20 | 379 | 1.02e-28 | 120 |
| MS.gene21760.t1 | AT5G51450 | 27.157 | 394 | 234 | 10 | 4 | 354 | 20 | 403 | 5.21e-22 | 100 |
| MS.gene21760.t1 | AT5G51450 | 26.598 | 391 | 240 | 9 | 4 | 354 | 20 | 403 | 6.41e-22 | 100 |
| MS.gene21760.t1 | AT2G44581 | 41.250 | 80 | 40 | 3 | 265 | 338 | 44 | 122 | 4.41e-12 | 64.3 |
| MS.gene21760.t1 | AT5G01960 | 32.812 | 128 | 80 | 4 | 214 | 337 | 285 | 410 | 1.29e-11 | 67.0 |
Find 121 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTGAGACTTTGAGATATT+TGG | 0.085151 | 5.2:-1923974 | None:intergenic |
| CACTGCATTGTTGTTAATTA+AGG | 0.141626 | 5.2:+1920781 | MS.gene21760:CDS |
| TAAAAGATACAATTCGAATA+TGG | 0.213863 | 5.2:-1920871 | None:intergenic |
| TACATGGCCTCTTTGAATTA+TGG | 0.227378 | 5.2:+1923932 | MS.gene21760:CDS |
| AGCTCTTCAGGGGTTGCTTC+TGG | 0.229501 | 5.2:-1922158 | None:intergenic |
| GGAGGAAAGGGTACATTTAT+TGG | 0.248039 | 5.2:-1923875 | None:intergenic |
| CTATGTCACTGACATACTTA+TGG | 0.261500 | 5.2:+1921630 | MS.gene21760:CDS |
| TCTACCAGTGTTGATCTTAA+TGG | 0.263034 | 5.2:+1923800 | MS.gene21760:CDS |
| GAATTCCCTTGCACCTAATT+CGG | 0.271090 | 5.2:+1922045 | MS.gene21760:CDS |
| GGGAGCTATACGAGACATTT+AGG | 0.291661 | 5.2:+1922066 | MS.gene21760:CDS |
| TCTCGTATAGCTCCCGAATT+AGG | 0.297753 | 5.2:-1922058 | None:intergenic |
| ACTCACGCATTGAGCTCTTC+AGG | 0.330562 | 5.2:-1922170 | None:intergenic |
| GCTTCTTCTTAACATGGGTT+TGG | 0.359369 | 5.2:+1920592 | MS.gene21760:CDS |
| AATTCCCTTGCACCTAATTC+GGG | 0.382327 | 5.2:+1922046 | MS.gene21760:CDS |
| AAGAAGCACCAAACTGATCT+TGG | 0.383609 | 5.2:-1920576 | None:intergenic |
| GCAATCATGGAGGGAGGTTA+TGG | 0.389288 | 5.2:+1920697 | MS.gene21760:CDS |
| ACAATCAGATGGTCATCAAC+AGG | 0.391362 | 5.2:+1922462 | MS.gene21760:CDS |
| GAAGGCAATGAACATGAAAA+AGG | 0.391922 | 5.2:-1922342 | None:intergenic |
| AATTAAGGCTTTACATTGGT+TGG | 0.392154 | 5.2:+1920796 | MS.gene21760:CDS |
| AGTTGATCTATCAGAAACTA+TGG | 0.394151 | 5.2:+1922023 | MS.gene21760:intron |
| ATATGCTGGTCTTAGTTTGA+TGG | 0.410943 | 5.2:+1920478 | MS.gene21760:CDS |
| CCATCTTGAATCTCCGAAGA+AGG | 0.414407 | 5.2:-1924246 | None:intergenic |
| AAAAGATACAATTCGAATAT+GGG | 0.417391 | 5.2:-1920870 | None:intergenic |
| TCTCAAATTTACAGATCTCC+TGG | 0.417947 | 5.2:+1923749 | MS.gene21760:intron |
| TCTGTGGCAACTTACTAAAA+AGG | 0.420120 | 5.2:+1920628 | MS.gene21760:CDS |
| ACACCATTGCCGGATAAAAC+TGG | 0.424380 | 5.2:-1920541 | None:intergenic |
| TCTTAGTTTGATGGCAACTT+TGG | 0.428785 | 5.2:+1920487 | MS.gene21760:CDS |
| TTCAACTTCCAAGATCAGTT+TGG | 0.429813 | 5.2:+1920568 | MS.gene21760:CDS |
| ATGTTCATTGCCTTCGATCA+TGG | 0.435620 | 5.2:+1922350 | MS.gene21760:CDS |
| AACTGCTGCTGGAGGTCAGC+AGG | 0.439414 | 5.2:+1922435 | MS.gene21760:CDS |
| TTGCCCTACTTGCAGAGCCT+TGG | 0.442641 | 5.2:+1922390 | MS.gene21760:CDS |
| ACACTGGTAGATTCAGCAAC+CGG | 0.446332 | 5.2:-1923788 | None:intergenic |
| TCTTCCTTCCCAACCATACA+TGG | 0.446384 | 5.2:+1923916 | MS.gene21760:CDS |
| GTTGAAAGATACACCATTGC+CGG | 0.449042 | 5.2:-1920551 | None:intergenic |
| AATGTACCCTTTCCTCCAAC+AGG | 0.449335 | 5.2:+1923881 | MS.gene21760:CDS |
| TGCCGCCCCACTGCCAAGCT+CGG | 0.454269 | 5.2:-1922694 | None:intergenic |
| ATGGTTGGGAAGGAAGAAAA+TGG | 0.454733 | 5.2:-1923910 | None:intergenic |
| CAACCAAGGCTCTGCAAGTA+GGG | 0.460830 | 5.2:-1922393 | None:intergenic |
| GGTACATTTATTGGCCCACC+AGG | 0.464241 | 5.2:-1923866 | None:intergenic |
| CTCACGCATTGAGCTCTTCA+GGG | 0.465783 | 5.2:-1922169 | None:intergenic |
| TTTGGTGCTTCTTCTTAACA+TGG | 0.467442 | 5.2:+1920586 | MS.gene21760:CDS |
| AGGCAAGCTTAGCCCTTCTT+CGG | 0.472020 | 5.2:+1924233 | MS.gene21760:CDS |
| AAATATCTCAAAGTCTCAGC+TGG | 0.472616 | 5.2:+1923976 | MS.gene21760:CDS |
| GAAAATGGAACAACTGCTGC+TGG | 0.475916 | 5.2:+1922424 | MS.gene21760:CDS |
| CTCTGTTACATTCCTTGCGA+TGG | 0.480228 | 5.2:+1920757 | MS.gene21760:CDS |
| AAGTGTCCTGTTGGAGGAAA+GGG | 0.484734 | 5.2:-1923887 | None:intergenic |
| CAAAGAGGCCATGTATGGTT+GGG | 0.485097 | 5.2:-1923924 | None:intergenic |
| TACCGTACAAAAGAAGTTGC+GGG | 0.488992 | 5.2:-1922801 | None:intergenic |
| CACTGGTAGATTCAGCAACC+GGG | 0.502423 | 5.2:-1923787 | None:intergenic |
| TCAAAGAGGCCATGTATGGT+TGG | 0.504066 | 5.2:-1923925 | None:intergenic |
| GGTCAAACCGAGCTTGGCAG+TGG | 0.508618 | 5.2:+1922687 | MS.gene21760:CDS |
| GGGTAATCTTCGAGAGGCTG+AGG | 0.510249 | 5.2:+1920658 | MS.gene21760:CDS |
| TAATTCAAAGAGGCCATGTA+TGG | 0.511475 | 5.2:-1923929 | None:intergenic |
| AGAGGCTTAATGAGCAATCA+TGG | 0.512252 | 5.2:+1920684 | MS.gene21760:CDS |
| GATAAGAGAAGTGTAGATGA+TGG | 0.514654 | 5.2:+1924189 | MS.gene21760:CDS |
| AAGCTGCAGCAGCAGCTGCT+TGG | 0.515752 | 5.2:-1922749 | None:intergenic |
| CAAAATCAGTTTCATATCCC+TGG | 0.517693 | 5.2:+1923848 | MS.gene21760:CDS |
| AGTACAGGTCAAACCGAGCT+TGG | 0.522407 | 5.2:+1922681 | MS.gene21760:CDS |
| CTCAAATTTACAGATCTCCT+GGG | 0.523201 | 5.2:+1923750 | MS.gene21760:intron |
| GAAGTGTCCTGTTGGAGGAA+AGG | 0.525016 | 5.2:-1923888 | None:intergenic |
| GGGACAGGCACTGGAAGTAC+AGG | 0.525139 | 5.2:+1922666 | MS.gene21760:intron |
| GTCAAACCGAGCTTGGCAGT+GGG | 0.527655 | 5.2:+1922688 | MS.gene21760:CDS |
| GCCTCTTTGAATTATGGAGA+GGG | 0.532058 | 5.2:+1923938 | MS.gene21760:CDS |
| TTGGTGCTTCTTCTTAACAT+GGG | 0.533149 | 5.2:+1920587 | MS.gene21760:CDS |
| TCGAGGTAAAATGTGAAGAC+TGG | 0.536892 | 5.2:-1921673 | None:intergenic |
| AAAGAAGAAGCACAGATACA+TGG | 0.542978 | 5.2:-1921722 | None:intergenic |
| CATCTTGAATCTCCGAAGAA+GGG | 0.544147 | 5.2:-1924245 | None:intergenic |
| AAATGGAAGTGTCCTGTTGG+AGG | 0.548423 | 5.2:-1923893 | None:intergenic |
| ACAACCAAGGCTCTGCAAGT+AGG | 0.549795 | 5.2:-1922394 | None:intergenic |
| TTCGAGAGGCTGAGGTTGAG+AGG | 0.554605 | 5.2:+1920666 | MS.gene21760:CDS |
| AAATGCTATCTAGAAGAAGA+AGG | 0.561235 | 5.2:-1920901 | None:intergenic |
| ACATTTGATACAAACATGGC+AGG | 0.563896 | 5.2:+1920943 | MS.gene21760:CDS |
| CCTTCTTCGGAGATTCAAGA+TGG | 0.565004 | 5.2:+1924246 | MS.gene21760:CDS |
| GGCCTCTACTGTTAAATGCA+TGG | 0.568487 | 5.2:-1920520 | None:intergenic |
| AATTCTACAACAACAGATTG+AGG | 0.573465 | 5.2:+1924012 | MS.gene21760:CDS |
| AGAAAATGGAAGTGTCCTGT+TGG | 0.573981 | 5.2:-1923896 | None:intergenic |
| ATGAGGTTGCAGACATATGC+TGG | 0.574042 | 5.2:+1920464 | MS.gene21760:CDS |
| GAGGCCATGTATGGTTGGGA+AGG | 0.583580 | 5.2:-1923920 | None:intergenic |
| TGGGATAATGTGGTCACTGT+AGG | 0.584012 | 5.2:-1920851 | None:intergenic |
| AACCGAGCTTGGCAGTGGGG+CGG | 0.584169 | 5.2:+1922692 | MS.gene21760:CDS |
| TGGTTATTATGTGTGTTCTG+TGG | 0.584686 | 5.2:+1920612 | MS.gene21760:CDS |
| AATTCGAATATGGGATAATG+TGG | 0.586853 | 5.2:-1920861 | None:intergenic |
| CATACTTATGGAGGGACAGT+GGG | 0.587918 | 5.2:+1921642 | MS.gene21760:CDS |
| AGCTCCCGAATTAGGTGCAA+GGG | 0.588299 | 5.2:-1922050 | None:intergenic |
| GAAAGCAAAGAACAGTGAAA+CGG | 0.588487 | 5.2:-1920969 | None:intergenic |
| TACCATGCATTTAACAGTAG+AGG | 0.591610 | 5.2:+1920518 | MS.gene21760:CDS |
| GGCCTCTTTGAATTATGGAG+AGG | 0.595038 | 5.2:+1923937 | MS.gene21760:CDS |
| TGGGTACACTAATTATCCCC+CGG | 0.598531 | 5.2:+1923769 | MS.gene21760:CDS |
| TGTCACTGACATACTTATGG+AGG | 0.600216 | 5.2:+1921633 | MS.gene21760:CDS |
| GTCACTGACATACTTATGGA+GGG | 0.607377 | 5.2:+1921634 | MS.gene21760:CDS |
| TGTTAATTAAGGCTTTACAT+TGG | 0.609042 | 5.2:+1920792 | MS.gene21760:CDS |
| TTCTCCATTAAGATCAACAC+TGG | 0.609743 | 5.2:-1923804 | None:intergenic |
| TCACGCATTGAGCTCTTCAG+GGG | 0.610326 | 5.2:-1922168 | None:intergenic |
| AATCAGTTTCATATCCCTGG+TGG | 0.611448 | 5.2:+1923851 | MS.gene21760:CDS |
| GCAAGTCCCTAACAAGGTCG+AGG | 0.613179 | 5.2:-1921690 | None:intergenic |
| ACATACTTATGGAGGGACAG+TGG | 0.615041 | 5.2:+1921641 | MS.gene21760:CDS |
| TAATGTGGTCACTGTAGGAG+TGG | 0.615046 | 5.2:-1920846 | None:intergenic |
| GTCGCTCTAGCCATGATCGA+AGG | 0.616148 | 5.2:-1922360 | None:intergenic |
| CAGCAGGCATCACAATCAGA+TGG | 0.619437 | 5.2:+1922451 | MS.gene21760:CDS |
| ATCAGTTTCATATCCCTGGT+GGG | 0.620386 | 5.2:+1923852 | MS.gene21760:CDS |
| GTACCGTACAAAAGAAGTTG+CGG | 0.620554 | 5.2:-1922802 | None:intergenic |
| TAGCTCCCGAATTAGGTGCA+AGG | 0.627075 | 5.2:-1922051 | None:intergenic |
| TTGTGTAGAGGAACATGATG+AGG | 0.632219 | 5.2:+1920447 | None:intergenic |
| ACCCTCTCCATAATTCAAAG+AGG | 0.632280 | 5.2:-1923939 | None:intergenic |
| CGGCAACTGATAGTTTCAGT+CGG | 0.633685 | 5.2:+1922712 | MS.gene21760:CDS |
| ACAATGCAGTGACCATCGCA+AGG | 0.636559 | 5.2:-1920769 | None:intergenic |
| AATGGAACAACTGCTGCTGG+AGG | 0.637463 | 5.2:+1922427 | MS.gene21760:CDS |
| CAATCAGATGGTCATCAACA+GGG | 0.640013 | 5.2:+1922463 | MS.gene21760:CDS |
| ATTCTTGGGTAATCTTCGAG+AGG | 0.645712 | 5.2:+1920652 | MS.gene21760:CDS |
| GCTTAATGAGCAATCATGGA+GGG | 0.653113 | 5.2:+1920688 | MS.gene21760:CDS |
| TGAAACATTTGATACAAACA+TGG | 0.654358 | 5.2:+1920939 | MS.gene21760:CDS |
| AGTGCAGCAAGTCCCTAACA+AGG | 0.676461 | 5.2:-1921696 | None:intergenic |
| GGCTTAATGAGCAATCATGG+AGG | 0.679748 | 5.2:+1920687 | MS.gene21760:CDS |
| GCACAATCATCAGAAAGCAG+AGG | 0.681412 | 5.2:+1924213 | MS.gene21760:CDS |
| TCAAACCGAGCTTGGCAGTG+GGG | 0.681424 | 5.2:+1922689 | MS.gene21760:CDS |
| ACTGGTAGATTCAGCAACCG+GGG | 0.683857 | 5.2:-1923786 | None:intergenic |
| TAATGAGCAATCATGGAGGG+AGG | 0.688793 | 5.2:+1920691 | MS.gene21760:CDS |
| GTACATTTATTGGCCCACCA+GGG | 0.713685 | 5.2:-1923865 | None:intergenic |
| CTGGTAGATTCAGCAACCGG+GGG | 0.726671 | 5.2:-1923785 | None:intergenic |
| CGTACAAAAGAAGTTGCGGG+AGG | 0.739850 | 5.2:-1922798 | None:intergenic |
| ACAGAATCTGCAGAGCACAG+AGG | 0.756811 | 5.2:+1924167 | MS.gene21760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCATATTCATTTTATTT+TGG | + | chr5.2:1921947-1921966 | MS.gene21760:intron | 10.0% |
| !! | AAATAATACTATCAACAATT+AGG | - | chr5.2:1921242-1921261 | None:intergenic | 15.0% |
| !! | ACATATAGTAATATGATTTA+TGG | - | chr5.2:1921316-1921335 | None:intergenic | 15.0% |
| !! | ATATAGTAATATGATTTATG+GGG | - | chr5.2:1921314-1921333 | None:intergenic | 15.0% |
| !! | CATATAGTAATATGATTTAT+GGG | - | chr5.2:1921315-1921334 | None:intergenic | 15.0% |
| !! | GAAAAAAAAAAAATCAAAAC+AGG | - | chr5.2:1923451-1923470 | None:intergenic | 15.0% |
| !! | TGTGAAAATACAAATAAAAT+AGG | - | chr5.2:1921486-1921505 | None:intergenic | 15.0% |
| !!! | ATTTATCTTTTCAAATAAAC+CGG | + | chr5.2:1921273-1921292 | MS.gene21760:intron | 15.0% |
| !! | AAAAATAAGCAAATCCAAAA+GGG | - | chr5.2:1922851-1922870 | None:intergenic | 20.0% |
| !! | AAAAGATACAATTCGAATAT+GGG | - | chr5.2:1920873-1920892 | None:intergenic | 20.0% |
| !! | ATATCTCTGTATAAATGATA+GGG | + | chr5.2:1921783-1921802 | MS.gene21760:intron | 20.0% |
| !! | TAAAAGATACAATTCGAATA+TGG | - | chr5.2:1920874-1920893 | None:intergenic | 20.0% |
| !! | TATATCTCTGTATAAATGAT+AGG | + | chr5.2:1921782-1921801 | MS.gene21760:intron | 20.0% |
| !! | TGAAATTTCATATATCAACA+TGG | - | chr5.2:1921062-1921081 | None:intergenic | 20.0% |
| !!! | AAACAATAGTGGAATATAAT+AGG | - | chr5.2:1923427-1923446 | None:intergenic | 20.0% |
| !!! | ATTCGAATTGTATCTTTTAT+GGG | + | chr5.2:1920875-1920894 | MS.gene21760:CDS | 20.0% |
| !!! | TATTCGAATTGTATCTTTTA+TGG | + | chr5.2:1920874-1920893 | MS.gene21760:CDS | 20.0% |
| ! | AAAATATGTGAGAGAAATTC+CGG | - | chr5.2:1923333-1923352 | None:intergenic | 25.0% |
| ! | AGATTTACTCATTTAACCAT+TGG | + | chr5.2:1921837-1921856 | MS.gene21760:intron | 25.0% |
| ! | CAAAAATAAGCAAATCCAAA+AGG | - | chr5.2:1922852-1922871 | None:intergenic | 25.0% |
| ! | CTTTCAAAAAAAATCTCGAA+TGG | - | chr5.2:1923519-1923538 | None:intergenic | 25.0% |
| ! | GATTTACTCATTTAACCATT+GGG | + | chr5.2:1921838-1921857 | MS.gene21760:intron | 25.0% |
| ! | TAAAAAAGATAACTAGTGGA+AGG | - | chr5.2:1921990-1922009 | None:intergenic | 25.0% |
| ! | TAAAAAATAGCCAATCCAAA+CGG | + | chr5.2:1923147-1923166 | MS.gene21760:intron | 25.0% |
| ! | TAAAAATAGTAATCGCAAAG+AGG | - | chr5.2:1920727-1920746 | None:intergenic | 25.0% |
| ! | TAGGTAAAAAAGATAACTAG+TGG | - | chr5.2:1921994-1922013 | None:intergenic | 25.0% |
| ! | TGAAACATTTGATACAAACA+TGG | + | chr5.2:1920939-1920958 | MS.gene21760:CDS | 25.0% |
| ! | TGTTAATTAAGGCTTTACAT+TGG | + | chr5.2:1920792-1920811 | MS.gene21760:CDS | 25.0% |
| ! | TTCCAAAAAAAAGGGATATT+GGG | - | chr5.2:1923174-1923193 | None:intergenic | 25.0% |
| ! | TTTCAATACTAAAGCTAGTA+TGG | + | chr5.2:1923721-1923740 | MS.gene21760:intron | 25.0% |
| ! | TTTCACATCTGTTTACTATT+CGG | + | chr5.2:1921499-1921518 | MS.gene21760:intron | 25.0% |
| !! | TAAAGCAAAGTAACATTTTG+TGG | + | chr5.2:1923635-1923654 | MS.gene21760:intron | 25.0% |
| !! | TGCACTTAAAATCTAGTTTA+CGG | + | chr5.2:1921862-1921881 | MS.gene21760:intron | 25.0% |
| !! | TTGCTTTGTCAATTTAACTT+GGG | + | chr5.2:1922646-1922665 | MS.gene21760:intron | 25.0% |
| !!! | AAGCATGTAGTTTTAATCTT+TGG | + | chr5.2:1923392-1923411 | MS.gene21760:intron | 25.0% |
| !!! | AATATCCCTTTTTTTTGGAA+CGG | + | chr5.2:1923174-1923193 | MS.gene21760:intron | 25.0% |
| !!! | ACTTACTAAAAAGGTATTCT+TGG | + | chr5.2:1920637-1920656 | MS.gene21760:CDS | 25.0% |
| !!! | AGCATGTAGTTTTAATCTTT+GGG | + | chr5.2:1923393-1923412 | MS.gene21760:intron | 25.0% |
| !!! | CAATATCATCAGAGTTTTTT+TGG | + | chr5.2:1921137-1921156 | MS.gene21760:intron | 25.0% |
| !!! | CTTACTAAAAAGGTATTCTT+GGG | + | chr5.2:1920638-1920657 | MS.gene21760:CDS | 25.0% |
| !!! | GTATTATCAGTATTTTGAGT+TGG | - | chr5.2:1923682-1923701 | None:intergenic | 25.0% |
| !!! | TCTTTGCGATTACTATTTTT+AGG | + | chr5.2:1920726-1920745 | MS.gene21760:CDS | 25.0% |
| !!! | TTTGAATTGCATATTTTGAG+TGG | + | chr5.2:1924070-1924089 | MS.gene21760:intron | 25.0% |
| AAAAAATAGCCAATCCAAAC+GGG | + | chr5.2:1923148-1923167 | MS.gene21760:intron | 30.0% | |
| AAATGCTATCTAGAAGAAGA+AGG | - | chr5.2:1920904-1920923 | None:intergenic | 30.0% | |
| AATCAAATTACGCAATACCT+AGG | + | chr5.2:1921403-1921422 | MS.gene21760:intron | 30.0% | |
| AATTAAGGCTTTACATTGGT+TGG | + | chr5.2:1920796-1920815 | MS.gene21760:CDS | 30.0% | |
| AATTCGAATATGGGATAATG+TGG | - | chr5.2:1920864-1920883 | None:intergenic | 30.0% | |
| AATTCTACAACAACAGATTG+AGG | + | chr5.2:1924012-1924031 | MS.gene21760:CDS | 30.0% | |
| ACCAAAACACACAAGTATAA+AGG | - | chr5.2:1921533-1921552 | None:intergenic | 30.0% | |
| ACGTAATTGACAATGATACT+TGG | + | chr5.2:1921885-1921904 | MS.gene21760:intron | 30.0% | |
| AGTTCCAAAAAAGGGATATT+GGG | - | chr5.2:1923062-1923081 | None:intergenic | 30.0% | |
| AGTTGATCTATCAGAAACTA+TGG | + | chr5.2:1922023-1922042 | MS.gene21760:intron | 30.0% | |
| ATAAGCCGTTCCAAAAAAAA+GGG | - | chr5.2:1923182-1923201 | None:intergenic | 30.0% | |
| ATACTCTTCAGAATAGTTCT+CGG | + | chr5.2:1923304-1923323 | MS.gene21760:intron | 30.0% | |
| ATATATCAACATGGCTTAGT+TGG | - | chr5.2:1921053-1921072 | None:intergenic | 30.0% | |
| CCAAAACACACAAGTATAAA+GGG | - | chr5.2:1921532-1921551 | None:intergenic | 30.0% | |
| CGTAATTGACAATGATACTT+GGG | + | chr5.2:1921886-1921905 | MS.gene21760:intron | 30.0% | |
| CTTGCTTTGTCAATTTAACT+TGG | + | chr5.2:1922645-1922664 | MS.gene21760:intron | 30.0% | |
| GTAATTGACAATGATACTTG+GGG | + | chr5.2:1921887-1921906 | MS.gene21760:intron | 30.0% | |
| GTTCCAAAAAAAAGGGATAT+TGG | - | chr5.2:1923175-1923194 | None:intergenic | 30.0% | |
| TATATCAACATGGCTTAGTT+GGG | - | chr5.2:1921052-1921071 | None:intergenic | 30.0% | |
| TCAAAACAGGAAAACAATAG+TGG | - | chr5.2:1923438-1923457 | None:intergenic | 30.0% | |
| TGCAGAATCTGTTTAAAAGT+GGG | - | chr5.2:1924138-1924157 | None:intergenic | 30.0% | |
| TTGCAGAATCTGTTTAAAAG+TGG | - | chr5.2:1924139-1924158 | None:intergenic | 30.0% | |
| ! | ACTTCACATGTTTGCTAAAA+TGG | + | chr5.2:1923604-1923623 | MS.gene21760:intron | 30.0% |
| ! | CACTGCATTGTTGTTAATTA+AGG | + | chr5.2:1920781-1920800 | MS.gene21760:CDS | 30.0% |
| ! | TAGATCAACTTCAAGTTAGT+AGG | - | chr5.2:1922013-1922032 | None:intergenic | 30.0% |
| ! | TTTTAGCAAACATGTGAAGT+AGG | - | chr5.2:1923604-1923623 | None:intergenic | 30.0% |
| !! | ATTCTGAAGAGTATTACACA+AGG | - | chr5.2:1923298-1923317 | None:intergenic | 30.0% |
| !!! | ATCAGAGTTTTTTTGGCATA+GGG | + | chr5.2:1921144-1921163 | MS.gene21760:intron | 30.0% |
| AAATATCTCAAAGTCTCAGC+TGG | + | chr5.2:1923976-1923995 | MS.gene21760:CDS | 35.0% | |
| AACGAAAGCAGTTCCAAAAA+AGG | - | chr5.2:1923071-1923090 | None:intergenic | 35.0% | |
| AATCTGTTTAAAAGTGGGAG+AGG | - | chr5.2:1924133-1924152 | None:intergenic | 35.0% | |
| ACATTTGATACAAACATGGC+AGG | + | chr5.2:1920943-1920962 | MS.gene21760:CDS | 35.0% | |
| ACGAAAGCAGTTCCAAAAAA+GGG | - | chr5.2:1923070-1923089 | None:intergenic | 35.0% | |
| AGTATGAACAACTCATCAGT+AGG | - | chr5.2:1921021-1921040 | None:intergenic | 35.0% | |
| ATCTGTTTAAAAGTGGGAGA+GGG | - | chr5.2:1924132-1924151 | None:intergenic | 35.0% | |
| ATGAAATCTGTGCTATGTTG+TGG | + | chr5.2:1923200-1923219 | MS.gene21760:intron | 35.0% | |
| CAAAAATAGCCAATCCAAAC+AGG | + | chr5.2:1923036-1923055 | MS.gene21760:intron | 35.0% | |
| CAAAATCAGTTTCATATCCC+TGG | + | chr5.2:1923848-1923867 | MS.gene21760:CDS | 35.0% | |
| CAGTTCCAAAAAAGGGATAT+TGG | - | chr5.2:1923063-1923082 | None:intergenic | 35.0% | |
| CATAAGCCGTTCCAAAAAAA+AGG | - | chr5.2:1923183-1923202 | None:intergenic | 35.0% | |
| CTATGTCACTGACATACTTA+TGG | + | chr5.2:1921630-1921649 | MS.gene21760:CDS | 35.0% | |
| CTCAAATTTACAGATCTCCT+GGG | + | chr5.2:1923750-1923769 | MS.gene21760:intron | 35.0% | |
| CTTGTCAGTAATATGCAAGA+TGG | + | chr5.2:1922536-1922555 | MS.gene21760:intron | 35.0% | |
| GAAAGCAAAGAACAGTGAAA+CGG | - | chr5.2:1920972-1920991 | None:intergenic | 35.0% | |
| GAAGGCAATGAACATGAAAA+AGG | - | chr5.2:1922345-1922364 | None:intergenic | 35.0% | |
| GATAATCACTCACTGTATGT+AGG | + | chr5.2:1922498-1922517 | MS.gene21760:intron | 35.0% | |
| TAATTCAAAGAGGCCATGTA+TGG | - | chr5.2:1923932-1923951 | None:intergenic | 35.0% | |
| TACATGGCCTCTTTGAATTA+TGG | + | chr5.2:1923932-1923951 | MS.gene21760:CDS | 35.0% | |
| TACCATGCATTTAACAGTAG+AGG | + | chr5.2:1920518-1920537 | MS.gene21760:CDS | 35.0% | |
| TAGGAGGAAAAGGAATAAGA+AGG | - | chr5.2:1921002-1921021 | None:intergenic | 35.0% | |
| TCTCAAATTTACAGATCTCC+TGG | + | chr5.2:1923749-1923768 | MS.gene21760:intron | 35.0% | |
| TCTGTGGCAACTTACTAAAA+AGG | + | chr5.2:1920628-1920647 | MS.gene21760:CDS | 35.0% | |
| TGGTTATTATGTGTGTTCTG+TGG | + | chr5.2:1920612-1920631 | MS.gene21760:CDS | 35.0% | |
| TTCAACTTCCAAGATCAGTT+TGG | + | chr5.2:1920568-1920587 | MS.gene21760:CDS | 35.0% | |
| TTCTCCATTAAGATCAACAC+TGG | - | chr5.2:1923807-1923826 | None:intergenic | 35.0% | |
| TTGAAAGATTGAGTATGCTC+TGG | + | chr5.2:1923532-1923551 | MS.gene21760:intron | 35.0% | |
| ! | AAAGAAGAAGCACAGATACA+TGG | - | chr5.2:1921725-1921744 | None:intergenic | 35.0% |
| ! | ATTTTACCTCGACCTTGTTA+GGG | + | chr5.2:1921684-1921703 | MS.gene21760:CDS | 35.0% |
| ! | CCCTTTATACTTGTGTGTTT+TGG | + | chr5.2:1921529-1921548 | MS.gene21760:intron | 35.0% |
| ! | GATAAGAGAAGTGTAGATGA+TGG | + | chr5.2:1924189-1924208 | MS.gene21760:CDS | 35.0% |
| ! | TCTTAGTTTGATGGCAACTT+TGG | + | chr5.2:1920487-1920506 | MS.gene21760:CDS | 35.0% |
| ! | TTGGTGCTTCTTCTTAACAT+GGG | + | chr5.2:1920587-1920606 | MS.gene21760:CDS | 35.0% |
| !! | AGATTTTAAGTGCAACCCAA+TGG | - | chr5.2:1921856-1921875 | None:intergenic | 35.0% |
| !! | AGCTGAGACTTTGAGATATT+TGG | - | chr5.2:1923977-1923996 | None:intergenic | 35.0% |
| !! | ATATGCTGGTCTTAGTTTGA+TGG | + | chr5.2:1920478-1920497 | MS.gene21760:CDS | 35.0% |
| !! | TCTACCAGTGTTGATCTTAA+TGG | + | chr5.2:1923800-1923819 | MS.gene21760:CDS | 35.0% |
| !! | TTGTCAATTTAACTTGGGAC+AGG | + | chr5.2:1922651-1922670 | MS.gene21760:intron | 35.0% |
| !! | TTTGGTGCTTCTTCTTAACA+TGG | + | chr5.2:1920586-1920605 | MS.gene21760:CDS | 35.0% |
| !!! | CATCAGAGTTTTTTTGGCAT+AGG | + | chr5.2:1921143-1921162 | MS.gene21760:intron | 35.0% |
| !!! | GTGTCCACATATCAGTTTTT+TGG | - | chr5.2:1922323-1922342 | None:intergenic | 35.0% |
| !!! | TGCGATTACTATTTTTAGGC+AGG | + | chr5.2:1920730-1920749 | MS.gene21760:CDS | 35.0% |
| !!! | TGCTTATTTTTGAGCTTGTG+CGG | + | chr5.2:1922860-1922879 | MS.gene21760:intron | 35.0% |
| AACTCATCAGTAGGAGGAAA+AGG | - | chr5.2:1921012-1921031 | None:intergenic | 40.0% | |
| AATCAGTTTCATATCCCTGG+TGG | + | chr5.2:1923851-1923870 | MS.gene21760:CDS | 40.0% | |
| AATTCCCTTGCACCTAATTC+GGG | + | chr5.2:1922046-1922065 | MS.gene21760:CDS | 40.0% | |
| ACAATCAGATGGTCATCAAC+AGG | + | chr5.2:1922462-1922481 | MS.gene21760:CDS | 40.0% | |
| ACCCTCTCCATAATTCAAAG+AGG | - | chr5.2:1923942-1923961 | None:intergenic | 40.0% | |
| AGAGGCTTAATGAGCAATCA+TGG | + | chr5.2:1920684-1920703 | MS.gene21760:CDS | 40.0% | |
| ATCAGTTTCATATCCCTGGT+GGG | + | chr5.2:1923852-1923871 | MS.gene21760:CDS | 40.0% | |
| ATCTAACTGCCTAAAGAGCT+AGG | + | chr5.2:1923236-1923255 | MS.gene21760:intron | 40.0% | |
| ATGAACAACTCATCAGTAGG+AGG | - | chr5.2:1921018-1921037 | None:intergenic | 40.0% | |
| ATGGTTGGGAAGGAAGAAAA+TGG | - | chr5.2:1923913-1923932 | None:intergenic | 40.0% | |
| ATGTTCATTGCCTTCGATCA+TGG | + | chr5.2:1922350-1922369 | MS.gene21760:CDS | 40.0% | |
| ATTCTTGGGTAATCTTCGAG+AGG | + | chr5.2:1920652-1920671 | MS.gene21760:CDS | 40.0% | |
| CAATCAGATGGTCATCAACA+GGG | + | chr5.2:1922463-1922482 | MS.gene21760:CDS | 40.0% | |
| CATCTTGAATCTCCGAAGAA+GGG | - | chr5.2:1924248-1924267 | None:intergenic | 40.0% | |
| GAATTCCCTTGCACCTAATT+CGG | + | chr5.2:1922045-1922064 | MS.gene21760:CDS | 40.0% | |
| GCAGCCAAAAAACTGATATG+TGG | + | chr5.2:1922316-1922335 | MS.gene21760:CDS | 40.0% | |
| GCCTCTTTGAATTATGGAGA+GGG | + | chr5.2:1923938-1923957 | MS.gene21760:CDS | 40.0% | |
| GCTTAATGAGCAATCATGGA+GGG | + | chr5.2:1920688-1920707 | MS.gene21760:CDS | 40.0% | |
| GCTTCTTCTTAACATGGGTT+TGG | + | chr5.2:1920592-1920611 | MS.gene21760:CDS | 40.0% | |
| GTACCGTACAAAAGAAGTTG+CGG | - | chr5.2:1922805-1922824 | None:intergenic | 40.0% | |
| GTCACTGACATACTTATGGA+GGG | + | chr5.2:1921634-1921653 | MS.gene21760:CDS | 40.0% | |
| GTTGAAAGATACACCATTGC+CGG | - | chr5.2:1920554-1920573 | None:intergenic | 40.0% | |
| TACCGTACAAAAGAAGTTGC+GGG | - | chr5.2:1922804-1922823 | None:intergenic | 40.0% | |
| TAGCAAACATGTGAAGTAGG+TGG | - | chr5.2:1923601-1923620 | None:intergenic | 40.0% | |
| TCGAGGTAAAATGTGAAGAC+TGG | - | chr5.2:1921676-1921695 | None:intergenic | 40.0% | |
| TCTGTTTAAAAGTGGGAGAG+GGG | - | chr5.2:1924131-1924150 | None:intergenic | 40.0% | |
| TGTCACTGACATACTTATGG+AGG | + | chr5.2:1921633-1921652 | MS.gene21760:CDS | 40.0% | |
| ! | AGCAGTTGTTCCATTTTCTG+GGG | - | chr5.2:1922422-1922441 | None:intergenic | 40.0% |
| ! | CAGCAGTTGTTCCATTTTCT+GGG | - | chr5.2:1922423-1922442 | None:intergenic | 40.0% |
| ! | CATTTTACCTCGACCTTGTT+AGG | + | chr5.2:1921683-1921702 | MS.gene21760:CDS | 40.0% |
| ! | GCAACTTCTTTTGTACGGTA+CGG | + | chr5.2:1922804-1922823 | MS.gene21760:intron | 40.0% |
| ! | GGAGGAAAGGGTACATTTAT+TGG | - | chr5.2:1923878-1923897 | None:intergenic | 40.0% |
| ! | TACTCTATGCCTAGCTCTTT+AGG | - | chr5.2:1923248-1923267 | None:intergenic | 40.0% |
| !! | AAGAAGCACCAAACTGATCT+TGG | - | chr5.2:1920579-1920598 | None:intergenic | 40.0% |
| !! | AAGAGTATTACACAAGGCTC+TGG | - | chr5.2:1923292-1923311 | None:intergenic | 40.0% |
| !! | AAGCTCTCTGTTTCTATCTC+AGG | + | chr5.2:1921557-1921576 | MS.gene21760:intron | 40.0% |
| !! | AGAAAATGGAAGTGTCCTGT+TGG | - | chr5.2:1923899-1923918 | None:intergenic | 40.0% |
| !! | CTGATTTTGTGCTTGTTGAC+TGG | - | chr5.2:1923837-1923856 | None:intergenic | 40.0% |
| !! | GTTTTAATCTTTGGGCCTGA+CGG | + | chr5.2:1923401-1923420 | MS.gene21760:intron | 40.0% |
| !!! | GGCCCAATATCCCTTTTTTT+TGG | + | chr5.2:1923169-1923188 | MS.gene21760:intron | 40.0% |
| AAAGGGATATTGGGCCTGTT+TGG | - | chr5.2:1923053-1923072 | None:intergenic | 45.0% | |
| AAGTGTCCTGTTGGAGGAAA+GGG | - | chr5.2:1923890-1923909 | None:intergenic | 45.0% | |
| AATCTGTGCTATGTTGTGGC+TGG | + | chr5.2:1923204-1923223 | MS.gene21760:intron | 45.0% | |
| AATGTACCCTTTCCTCCAAC+AGG | + | chr5.2:1923881-1923900 | MS.gene21760:CDS | 45.0% | |
| ACACCATTGCCGGATAAAAC+TGG | - | chr5.2:1920544-1920563 | None:intergenic | 45.0% | |
| ACACTGGTAGATTCAGCAAC+CGG | - | chr5.2:1923791-1923810 | None:intergenic | 45.0% | |
| ACATACTTATGGAGGGACAG+TGG | + | chr5.2:1921641-1921660 | MS.gene21760:CDS | 45.0% | |
| AGGCATAGAGTATAGCACCA+AGG | + | chr5.2:1923256-1923275 | MS.gene21760:intron | 45.0% | |
| ATGAGGTTGCAGACATATGC+TGG | + | chr5.2:1920464-1920483 | MS.gene21760:CDS | 45.0% | |
| CAAAGAGGCCATGTATGGTT+GGG | - | chr5.2:1923927-1923946 | None:intergenic | 45.0% | |
| CATACTTATGGAGGGACAGT+GGG | + | chr5.2:1921642-1921661 | MS.gene21760:CDS | 45.0% | |
| CCATCTTGAATCTCCGAAGA+AGG | - | chr5.2:1924249-1924268 | None:intergenic | 45.0% | |
| CCTTCTTCGGAGATTCAAGA+TGG | + | chr5.2:1924246-1924265 | MS.gene21760:CDS | 45.0% | |
| CGCAATACCTAGGCAGATTA+TGG | + | chr5.2:1921413-1921432 | MS.gene21760:intron | 45.0% | |
| CGGCAACTGATAGTTTCAGT+CGG | + | chr5.2:1922712-1922731 | MS.gene21760:CDS | 45.0% | |
| CTCTGTTACATTCCTTGCGA+TGG | + | chr5.2:1920757-1920776 | MS.gene21760:CDS | 45.0% | |
| CTGTGATCCATAATCTGCCT+AGG | - | chr5.2:1921423-1921442 | None:intergenic | 45.0% | |
| GAAAATGGAACAACTGCTGC+TGG | + | chr5.2:1922424-1922443 | MS.gene21760:CDS | 45.0% | |
| GATATTGGGCCTGTTTGGAT+TGG | - | chr5.2:1923048-1923067 | None:intergenic | 45.0% | |
| GCACAATCATCAGAAAGCAG+AGG | + | chr5.2:1924213-1924232 | MS.gene21760:CDS | 45.0% | |
| GGCCTCTACTGTTAAATGCA+TGG | - | chr5.2:1920523-1920542 | None:intergenic | 45.0% | |
| GGCCTCTTTGAATTATGGAG+AGG | + | chr5.2:1923937-1923956 | MS.gene21760:CDS | 45.0% | |
| GGCTTAATGAGCAATCATGG+AGG | + | chr5.2:1920687-1920706 | MS.gene21760:CDS | 45.0% | |
| GGGAGCTATACGAGACATTT+AGG | + | chr5.2:1922066-1922085 | MS.gene21760:CDS | 45.0% | |
| GGGGTATGACATGTAATGTC+CGG | - | chr5.2:1921295-1921314 | None:intergenic | 45.0% | |
| GTACATTTATTGGCCCACCA+GGG | - | chr5.2:1923868-1923887 | None:intergenic | 45.0% | |
| GTGGAATATAATAGGCCGTC+AGG | - | chr5.2:1923419-1923438 | None:intergenic | 45.0% | |
| TAATGAGCAATCATGGAGGG+AGG | + | chr5.2:1920691-1920710 | MS.gene21760:CDS | 45.0% | |
| TAATGTGGTCACTGTAGGAG+TGG | - | chr5.2:1920849-1920868 | None:intergenic | 45.0% | |
| TACGGTACGGCATTTATGCT+CGG | + | chr5.2:1922817-1922836 | MS.gene21760:intron | 45.0% | |
| TCAAAGAGGCCATGTATGGT+TGG | - | chr5.2:1923928-1923947 | None:intergenic | 45.0% | |
| TCAGAATAGTTCTCGGTCTC+CGG | + | chr5.2:1923311-1923330 | MS.gene21760:intron | 45.0% | |
| TCTCGTATAGCTCCCGAATT+AGG | - | chr5.2:1922061-1922080 | None:intergenic | 45.0% | |
| TCTTCCTTCCCAACCATACA+TGG | + | chr5.2:1923916-1923935 | MS.gene21760:CDS | 45.0% | |
| TGGGATAATGTGGTCACTGT+AGG | - | chr5.2:1920854-1920873 | None:intergenic | 45.0% | |
| TGGGTACACTAATTATCCCC+CGG | + | chr5.2:1923769-1923788 | MS.gene21760:CDS | 45.0% | |
| TTGGTTGTACCCCCAGAAAA+TGG | + | chr5.2:1922409-1922428 | MS.gene21760:CDS | 45.0% | |
| ! | CTCCCGCAACTTCTTTTGTA+CGG | + | chr5.2:1922799-1922818 | MS.gene21760:CDS | 45.0% |
| ! | GCAGCAGTTGTTCCATTTTC+TGG | - | chr5.2:1922424-1922443 | None:intergenic | 45.0% |
| ! | GCAGTTGTTCCATTTTCTGG+GGG | - | chr5.2:1922421-1922440 | None:intergenic | 45.0% |
| !! | AAATGGAAGTGTCCTGTTGG+AGG | - | chr5.2:1923896-1923915 | None:intergenic | 45.0% |
| !! | ATTTAACTTGGGACAGGCAC+TGG | + | chr5.2:1922657-1922676 | MS.gene21760:intron | 45.0% |
| !! | ATTTTCTGGGGGTACAACCA+AGG | - | chr5.2:1922410-1922429 | None:intergenic | 45.0% |
| !! | CAGTAGAGGCCAGTTTTATC+CGG | + | chr5.2:1920532-1920551 | MS.gene21760:CDS | 45.0% |
| !!! | CAGGCCCAATATCCCTTTTT+TGG | + | chr5.2:1923055-1923074 | MS.gene21760:intron | 45.0% |
| !!! | AATTTTACATATTTTTTAAA+TGG | + | chr5.2:1922245-1922264 | MS.gene21760:intron | 5.0% |
| AAAGGGATATTGGGCCCGTT+TGG | - | chr5.2:1923165-1923184 | None:intergenic | 50.0% | |
| AATGGAACAACTGCTGCTGG+AGG | + | chr5.2:1922427-1922446 | MS.gene21760:CDS | 50.0% | |
| ACAACCAAGGCTCTGCAAGT+AGG | - | chr5.2:1922397-1922416 | None:intergenic | 50.0% | |
| ACAATGCAGTGACCATCGCA+AGG | - | chr5.2:1920772-1920791 | None:intergenic | 50.0% | |
| ACAGAATCTGCAGAGCACAG+AGG | + | chr5.2:1924167-1924186 | MS.gene21760:CDS | 50.0% | |
| ACTCACGCATTGAGCTCTTC+AGG | - | chr5.2:1922173-1922192 | None:intergenic | 50.0% | |
| ACTGGTAGATTCAGCAACCG+GGG | - | chr5.2:1923789-1923808 | None:intergenic | 50.0% | |
| AGCTCCCGAATTAGGTGCAA+GGG | - | chr5.2:1922053-1922072 | None:intergenic | 50.0% | |
| AGGCAAGCTTAGCCCTTCTT+CGG | + | chr5.2:1924233-1924252 | MS.gene21760:CDS | 50.0% | |
| AGTACAGGTCAAACCGAGCT+TGG | + | chr5.2:1922681-1922700 | MS.gene21760:CDS | 50.0% | |
| AGTGCAGCAAGTCCCTAACA+AGG | - | chr5.2:1921699-1921718 | None:intergenic | 50.0% | |
| CAACCAAGGCTCTGCAAGTA+GGG | - | chr5.2:1922396-1922415 | None:intergenic | 50.0% | |
| CACTGGTAGATTCAGCAACC+GGG | - | chr5.2:1923790-1923809 | None:intergenic | 50.0% | |
| CAGCAGGCATCACAATCAGA+TGG | + | chr5.2:1922451-1922470 | MS.gene21760:CDS | 50.0% | |
| CGTACAAAAGAAGTTGCGGG+AGG | - | chr5.2:1922801-1922820 | None:intergenic | 50.0% | |
| CTCACGCATTGAGCTCTTCA+GGG | - | chr5.2:1922172-1922191 | None:intergenic | 50.0% | |
| GATATTGGGCCCGTTTGGAT+TGG | - | chr5.2:1923160-1923179 | None:intergenic | 50.0% | |
| GCAATCATGGAGGGAGGTTA+TGG | + | chr5.2:1920697-1920716 | MS.gene21760:CDS | 50.0% | |
| GGCATTTATGCTCGGACGTT+GGG | + | chr5.2:1922825-1922844 | MS.gene21760:intron | 50.0% | |
| GGGGGATAATTAGTGTACCC+AGG | - | chr5.2:1923770-1923789 | None:intergenic | 50.0% | |
| GGTACATTTATTGGCCCACC+AGG | - | chr5.2:1923869-1923888 | None:intergenic | 50.0% | |
| TAGCTCCCGAATTAGGTGCA+AGG | - | chr5.2:1922054-1922073 | None:intergenic | 50.0% | |
| TCACGCATTGAGCTCTTCAG+GGG | - | chr5.2:1922171-1922190 | None:intergenic | 50.0% | |
| ! | CACAAGGCTCTGGTATGAAC+AGG | - | chr5.2:1923282-1923301 | None:intergenic | 50.0% |
| ! | GAAGTGTCCTGTTGGAGGAA+AGG | - | chr5.2:1923891-1923910 | None:intergenic | 50.0% |
| !! | AGGCCAGTTTTATCCGGCAA+TGG | + | chr5.2:1920538-1920557 | MS.gene21760:CDS | 50.0% |
| AGCTCTTCAGGGGTTGCTTC+TGG | - | chr5.2:1922161-1922180 | None:intergenic | 55.0% | |
| CGGCATTTATGCTCGGACGT+TGG | + | chr5.2:1922824-1922843 | MS.gene21760:intron | 55.0% | |
| CTGGTAGATTCAGCAACCGG+GGG | - | chr5.2:1923788-1923807 | None:intergenic | 55.0% | |
| GAGGCCATGTATGGTTGGGA+AGG | - | chr5.2:1923923-1923942 | None:intergenic | 55.0% | |
| GCAAGTCCCTAACAAGGTCG+AGG | - | chr5.2:1921693-1921712 | None:intergenic | 55.0% | |
| GCTCTGGTATGAACAGGCCT+TGG | - | chr5.2:1923276-1923295 | None:intergenic | 55.0% | |
| GGGTAATCTTCGAGAGGCTG+AGG | + | chr5.2:1920658-1920677 | MS.gene21760:CDS | 55.0% | |
| GTCAAACCGAGCTTGGCAGT+GGG | + | chr5.2:1922688-1922707 | MS.gene21760:CDS | 55.0% | |
| GTCGCTCTAGCCATGATCGA+AGG | - | chr5.2:1922363-1922382 | None:intergenic | 55.0% | |
| TCAAACCGAGCTTGGCAGTG+GGG | + | chr5.2:1922689-1922708 | MS.gene21760:CDS | 55.0% | |
| TTCGAGAGGCTGAGGTTGAG+AGG | + | chr5.2:1920666-1920685 | MS.gene21760:CDS | 55.0% | |
| TTGCCCTACTTGCAGAGCCT+TGG | + | chr5.2:1922390-1922409 | MS.gene21760:CDS | 55.0% | |
| AACTGCTGCTGGAGGTCAGC+AGG | + | chr5.2:1922435-1922454 | MS.gene21760:CDS | 60.0% | |
| AAGCTGCAGCAGCAGCTGCT+TGG | - | chr5.2:1922752-1922771 | None:intergenic | 60.0% | |
| GGTCAAACCGAGCTTGGCAG+TGG | + | chr5.2:1922687-1922706 | MS.gene21760:CDS | 60.0% | |
| !! | GGGACAGGCACTGGAAGTAC+AGG | + | chr5.2:1922666-1922685 | MS.gene21760:intron | 60.0% |
| AACCGAGCTTGGCAGTGGGG+CGG | + | chr5.2:1922692-1922711 | MS.gene21760:CDS | 65.0% | |
| ! | GCTCGGACGTTGGGCCCTTT+TGG | + | chr5.2:1922834-1922853 | MS.gene21760:intron | 65.0% |
| TGCCGCCCCACTGCCAAGCT+CGG | - | chr5.2:1922697-1922716 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 1920461 | 1924278 | 1920461 | ID=MS.gene21760 |
| chr5.2 | mRNA | 1920461 | 1924278 | 1920461 | ID=MS.gene21760.t1;Parent=MS.gene21760 |
| chr5.2 | exon | 1920461 | 1920993 | 1920461 | ID=MS.gene21760.t1.exon1;Parent=MS.gene21760.t1 |
| chr5.2 | CDS | 1920461 | 1920993 | 1920461 | ID=cds.MS.gene21760.t1;Parent=MS.gene21760.t1 |
| chr5.2 | exon | 1921579 | 1921755 | 1921579 | ID=MS.gene21760.t1.exon2;Parent=MS.gene21760.t1 |
| chr5.2 | CDS | 1921579 | 1921755 | 1921579 | ID=cds.MS.gene21760.t1;Parent=MS.gene21760.t1 |
| chr5.2 | exon | 1922037 | 1922186 | 1922037 | ID=MS.gene21760.t1.exon3;Parent=MS.gene21760.t1 |
| chr5.2 | CDS | 1922037 | 1922186 | 1922037 | ID=cds.MS.gene21760.t1;Parent=MS.gene21760.t1 |
| chr5.2 | exon | 1922276 | 1922484 | 1922276 | ID=MS.gene21760.t1.exon4;Parent=MS.gene21760.t1 |
| chr5.2 | CDS | 1922276 | 1922484 | 1922276 | ID=cds.MS.gene21760.t1;Parent=MS.gene21760.t1 |
| chr5.2 | exon | 1922673 | 1922820 | 1922673 | ID=MS.gene21760.t1.exon5;Parent=MS.gene21760.t1 |
| chr5.2 | CDS | 1922673 | 1922820 | 1922673 | ID=cds.MS.gene21760.t1;Parent=MS.gene21760.t1 |
| chr5.2 | exon | 1923763 | 1924033 | 1923763 | ID=MS.gene21760.t1.exon6;Parent=MS.gene21760.t1 |
| chr5.2 | CDS | 1923763 | 1924033 | 1923763 | ID=cds.MS.gene21760.t1;Parent=MS.gene21760.t1 |
| chr5.2 | exon | 1924150 | 1924278 | 1924150 | ID=MS.gene21760.t1.exon7;Parent=MS.gene21760.t1 |
| chr5.2 | CDS | 1924150 | 1924278 | 1924150 | ID=cds.MS.gene21760.t1;Parent=MS.gene21760.t1 |
| Gene Sequence |
| Protein sequence |
