Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21866.t1 | XP_003610850.1 | 96.7 | 539 | 17 | 1 | 1 | 538 | 1 | 539 | 1.60E-271 | 944.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21866.t1 | Q9LW77 | 77.1 | 407 | 88 | 2 | 1 | 403 | 1 | 406 | 1.1e-172 | 607.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21866.t1 | G7K6H0 | 96.7 | 539 | 17 | 1 | 1 | 538 | 1 | 539 | 1.2e-271 | 944.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31164 | MS.gene21866 | PPI |
| MS.gene052128 | MS.gene21866 | PPI |
| MS.gene30950 | MS.gene21866 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21866.t1 | MTR_5g007710 | 97.217 | 539 | 14 | 1 | 1 | 538 | 1 | 539 | 0.0 | 1092 |
| MS.gene21866.t1 | MTR_5g007710 | 98.276 | 406 | 7 | 0 | 1 | 406 | 1 | 406 | 0.0 | 830 |
| MS.gene21866.t1 | MTR_4g077800 | 72.608 | 533 | 111 | 5 | 1 | 526 | 1 | 505 | 0.0 | 757 |
| MS.gene21866.t1 | MTR_4g077800 | 75.198 | 504 | 101 | 5 | 1 | 497 | 1 | 487 | 0.0 | 747 |
| MS.gene21866.t1 | MTR_3g007760 | 27.226 | 393 | 217 | 12 | 29 | 379 | 57 | 422 | 1.19e-29 | 123 |
| MS.gene21866.t1 | MTR_3g007760 | 26.667 | 360 | 205 | 10 | 62 | 379 | 57 | 399 | 1.48e-27 | 117 |
| MS.gene21866.t1 | MTR_4g077703 | 43.529 | 85 | 34 | 2 | 411 | 490 | 25 | 100 | 4.43e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21866.t1 | AT3G16090 | 65.283 | 530 | 135 | 9 | 1 | 526 | 1 | 485 | 0.0 | 669 |
| MS.gene21866.t1 | AT1G65040 | 72.249 | 418 | 112 | 2 | 1 | 414 | 1 | 418 | 0.0 | 630 |
| MS.gene21866.t1 | AT1G65040 | 68.900 | 418 | 103 | 3 | 1 | 414 | 1 | 395 | 0.0 | 588 |
| MS.gene21866.t1 | AT1G65040 | 71.053 | 304 | 84 | 2 | 115 | 414 | 44 | 347 | 7.88e-157 | 453 |
| MS.gene21866.t1 | AT1G65040 | 68.182 | 286 | 65 | 2 | 119 | 401 | 1 | 263 | 8.54e-138 | 402 |
| MS.gene21866.t1 | AT1G65040 | 72.727 | 231 | 60 | 1 | 176 | 403 | 23 | 253 | 2.47e-121 | 357 |
| MS.gene21866.t1 | AT1G65040 | 73.568 | 227 | 57 | 1 | 180 | 403 | 1 | 227 | 9.78e-121 | 357 |
| MS.gene21866.t1 | AT4G25230 | 28.108 | 370 | 213 | 9 | 4 | 330 | 20 | 379 | 7.19e-28 | 118 |
| MS.gene21866.t1 | AT4G25230 | 28.108 | 370 | 213 | 9 | 4 | 330 | 20 | 379 | 7.19e-28 | 118 |
| MS.gene21866.t1 | AT4G25230 | 28.108 | 370 | 213 | 9 | 4 | 330 | 20 | 379 | 7.19e-28 | 118 |
| MS.gene21866.t1 | AT5G51450 | 27.299 | 348 | 201 | 9 | 25 | 330 | 42 | 379 | 2.11e-21 | 98.2 |
| MS.gene21866.t1 | AT5G51450 | 27.299 | 348 | 201 | 9 | 25 | 330 | 42 | 379 | 2.12e-21 | 98.6 |
| MS.gene21866.t1 | AT2G44581 | 41.250 | 80 | 40 | 3 | 265 | 338 | 44 | 122 | 5.55e-12 | 63.9 |
| MS.gene21866.t1 | AT5G01960 | 32.812 | 128 | 80 | 4 | 214 | 337 | 285 | 410 | 1.32e-11 | 67.0 |
Find 126 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTGAGACTTTGAGATATT+TGG | 0.085151 | 5.1:-2032135 | None:intergenic |
| TTTACCAGTGTTGATCTTAA+TGG | 0.174947 | 5.1:+2031961 | MS.gene21866:CDS |
| CACGGCATTGTTGTTAATTA+AGG | 0.194438 | 5.1:+2028952 | MS.gene21866:CDS |
| TAAAAGATACAATTCGAATA+TGG | 0.213863 | 5.1:-2029042 | None:intergenic |
| TACATGGCCCCTTTGAATTA+TGG | 0.214808 | 5.1:+2032093 | MS.gene21866:CDS |
| AGCTCTTCAGGGGTTGCTTC+TGG | 0.229501 | 5.1:-2030322 | None:intergenic |
| GGAGGAAAGGGTACATTTAT+TGG | 0.250478 | 5.1:-2032036 | None:intergenic |
| CTATGTCACTGACATACTTA+TGG | 0.261500 | 5.1:+2029794 | MS.gene21866:CDS |
| TTGCCTCTGCTTTCTGATAA+TGG | 0.303513 | 5.1:-2032374 | None:intergenic |
| TCTCGTATAGCTCCCGTATT+AGG | 0.318051 | 5.1:-2030222 | None:intergenic |
| GGGAGCTATACGAGACATTT+AGG | 0.322570 | 5.1:+2030230 | MS.gene21866:CDS |
| ACTCACGCATTGAGCTCTTC+AGG | 0.330562 | 5.1:-2030334 | None:intergenic |
| GCTTCTTCTTAACATGGGTT+TGG | 0.359369 | 5.1:+2028763 | MS.gene21866:CDS |
| AAGAAGCACCAAACTGATCT+TGG | 0.383609 | 5.1:-2028747 | None:intergenic |
| GAAAATGGAACAACTGTTGC+TGG | 0.384815 | 5.1:+2030588 | MS.gene21866:CDS |
| GCAATCATGGAGGGAGGTTA+TGG | 0.389288 | 5.1:+2028868 | MS.gene21866:CDS |
| GAAGGCAATGAACATGAAAA+AGG | 0.391922 | 5.1:-2030506 | None:intergenic |
| AGTTGATCTATCAGAAACTA+TGG | 0.394151 | 5.1:+2030187 | MS.gene21866:intron |
| GAATTCCCTTGCACCTAATA+CGG | 0.394661 | 5.1:+2030209 | MS.gene21866:CDS |
| ATATGCTGGTCTTAGTTTGA+TGG | 0.410943 | 5.1:+2028649 | MS.gene21866:CDS |
| AATTAAGGCTTTGCATTGGT+TGG | 0.413236 | 5.1:+2028967 | MS.gene21866:CDS |
| AAAAGATACAATTCGAATAT+GGG | 0.417391 | 5.1:-2029041 | None:intergenic |
| GTGTCCGCATATCAGTTTCT+TGG | 0.418930 | 5.1:-2030484 | None:intergenic |
| ACACCATTGCCGGATAAAAC+TGG | 0.424380 | 5.1:-2028712 | None:intergenic |
| TCTTAGTTTGATGGCAACTT+TGG | 0.428785 | 5.1:+2028658 | MS.gene21866:CDS |
| TTCAACTTCCAAGATCAGTT+TGG | 0.429813 | 5.1:+2028739 | MS.gene21866:CDS |
| TATGTGGCAACTAACTAAAA+AGG | 0.431227 | 5.1:+2028799 | MS.gene21866:CDS |
| ATGTTCATTGCCTTCGATCA+TGG | 0.435620 | 5.1:+2030514 | MS.gene21866:CDS |
| TTGCCCTACTTGCAGAGCCT+TGG | 0.442641 | 5.1:+2030554 | MS.gene21866:CDS |
| ACCCCTCTCCATAATTCAAA+GGG | 0.443292 | 5.1:-2032101 | None:intergenic |
| ACACTGGTAAATTCAGCAAC+CGG | 0.445646 | 5.1:-2031949 | None:intergenic |
| GTTGAAAGATACACCATTGC+CGG | 0.449042 | 5.1:-2028722 | None:intergenic |
| TCTCAAATTTACAGACCTCC+TGG | 0.450252 | 5.1:+2031910 | MS.gene21866:intron |
| ATGGTTGGGAAGGAAGAAAA+TGG | 0.454733 | 5.1:-2032071 | None:intergenic |
| CAACCAAGGCTCTGCAAGTA+GGG | 0.460830 | 5.1:-2030557 | None:intergenic |
| TCTTCCTTCCCAACCATACA+TGG | 0.460959 | 5.1:+2032077 | MS.gene21866:CDS |
| GGTACATTTATTGGCCCACC+AGG | 0.464241 | 5.1:-2032027 | None:intergenic |
| CTCACGCATTGAGCTCTTCA+GGG | 0.465783 | 5.1:-2030333 | None:intergenic |
| TTTGGTGCTTCTTCTTAACA+TGG | 0.467442 | 5.1:+2028757 | MS.gene21866:CDS |
| AGGCAAGCTTAGCTCTTCTT+CGG | 0.472020 | 5.1:+2032391 | MS.gene21866:CDS |
| AAATATCTCAAAGTCTCAGC+TGG | 0.472616 | 5.1:+2032137 | MS.gene21866:CDS |
| TAATTCAAAGGGGCCATGTA+TGG | 0.472796 | 5.1:-2032090 | None:intergenic |
| GCCGTCATCAACACTTCTCT+TGG | 0.478127 | 5.1:-2032348 | None:intergenic |
| AATGTACCCTTTCCTCCAAC+GGG | 0.480269 | 5.1:+2032042 | MS.gene21866:CDS |
| CAAAGGGGCCATGTATGGTT+GGG | 0.485097 | 5.1:-2032085 | None:intergenic |
| TCAAAGGGGCCATGTATGGT+TGG | 0.502197 | 5.1:-2032086 | None:intergenic |
| TGGTTATTATGTGTGTTATG+TGG | 0.505143 | 5.1:+2028783 | MS.gene21866:CDS |
| TACCGTACAAAAGAAGTTGC+GGG | 0.505866 | 5.1:-2030962 | None:intergenic |
| AAGTGTCCCGTTGGAGGAAA+GGG | 0.509329 | 5.1:-2032048 | None:intergenic |
| GGGTAATCTTCGAGAGGCTG+AGG | 0.510249 | 5.1:+2028829 | MS.gene21866:CDS |
| CACTGGTAAATTCAGCAACC+GGG | 0.511841 | 5.1:-2031948 | None:intergenic |
| AGAGGCTTAATGAGCAATCA+TGG | 0.512252 | 5.1:+2028855 | MS.gene21866:CDS |
| CTCAGTTACATTCCTTGCGA+TGG | 0.515574 | 5.1:+2028928 | MS.gene21866:CDS |
| AAGCTGCAGCAGCAGCTGCT+TGG | 0.515752 | 5.1:-2030910 | None:intergenic |
| AAATGGAAGTGTCCCGTTGG+AGG | 0.517068 | 5.1:-2032054 | None:intergenic |
| CAAAATCAGTTTCATATCCC+TGG | 0.517693 | 5.1:+2032009 | MS.gene21866:CDS |
| TGCAACCCCACTGCTAAGCT+CGG | 0.519047 | 5.1:-2030855 | None:intergenic |
| GGGATAGGCACTGGAAGTAC+AGG | 0.519572 | 5.1:+2030827 | MS.gene21866:intron |
| TTGGTGCTTCTTCTTAACAT+GGG | 0.533149 | 5.1:+2028758 | MS.gene21866:CDS |
| AACCCCTCTCCATAATTCAA+AGG | 0.533374 | 5.1:-2032102 | None:intergenic |
| GAAGTGTCCCGTTGGAGGAA+AGG | 0.534440 | 5.1:-2032049 | None:intergenic |
| CTCAAATTTACAGACCTCCT+GGG | 0.535620 | 5.1:+2031911 | MS.gene21866:intron |
| TCGAGGTAAAATGTGAAGAC+TGG | 0.536892 | 5.1:-2029837 | None:intergenic |
| AAAGAAGAAGCACAGATACA+TGG | 0.542978 | 5.1:-2029886 | None:intergenic |
| GCATTTGATACAAACATGGC+AGG | 0.543519 | 5.1:+2029114 | MS.gene21866:CDS |
| GCCCCTTTGAATTATGGAGA+GGG | 0.543621 | 5.1:+2032099 | MS.gene21866:CDS |
| TACATTCCTTGCGATGGTCA+CGG | 0.545911 | 5.1:+2028934 | MS.gene21866:CDS |
| AATTCCCTTGCACCTAATAC+GGG | 0.549400 | 5.1:+2030210 | MS.gene21866:CDS |
| ACAACCAAGGCTCTGCAAGT+AGG | 0.549795 | 5.1:-2030558 | None:intergenic |
| TTCGAGAGGCTGAGGTTGAG+AGG | 0.554605 | 5.1:+2028837 | MS.gene21866:CDS |
| AAATGCTATCAAGAAGAAGA+AGG | 0.563718 | 5.1:-2029072 | None:intergenic |
| GGCCTCTACTGTTAAATGCA+TGG | 0.568487 | 5.1:-2028691 | None:intergenic |
| TCTTCTTCGGAGATTCAAGA+TGG | 0.568683 | 5.1:+2032404 | MS.gene21866:CDS |
| AATTCTACAACAACAGATTG+AGG | 0.573465 | 5.1:+2032173 | MS.gene21866:CDS |
| CCCCTTTGAATTATGGAGAG+GGG | 0.574251 | 5.1:+2032100 | MS.gene21866:CDS |
| ACTGTTGCTGGAGGTCAGCA+AGG | 0.579615 | 5.1:+2030600 | MS.gene21866:CDS |
| CAATCAGTTGGTCATCAACA+TGG | 0.579956 | 5.1:+2030627 | MS.gene21866:CDS |
| TAGCTCCCGTATTAGGTGCA+AGG | 0.580282 | 5.1:-2030215 | None:intergenic |
| AAATGTACCCTTTCCTCCAA+CGG | 0.580702 | 5.1:+2032041 | MS.gene21866:CDS |
| TGGGATAATGTGGTCACTGT+AGG | 0.584012 | 5.1:-2029022 | None:intergenic |
| AGCTCCCGTATTAGGTGCAA+GGG | 0.585630 | 5.1:-2030214 | None:intergenic |
| TGTTAATTAAGGCTTTGCAT+TGG | 0.586293 | 5.1:+2028963 | MS.gene21866:CDS |
| AATTCGAATATGGGATAATG+TGG | 0.586853 | 5.1:-2029032 | None:intergenic |
| CATACTTATGGAGGGACAGT+GGG | 0.587918 | 5.1:+2029806 | MS.gene21866:CDS |
| GAAAGCAAAGAACAGTGAAA+CGG | 0.588487 | 5.1:-2029140 | None:intergenic |
| TACCATGCATTTAACAGTAG+AGG | 0.591610 | 5.1:+2028689 | MS.gene21866:CDS |
| TGGGTACACTAATTATCCCC+CGG | 0.598531 | 5.1:+2031930 | MS.gene21866:CDS |
| TGTCACTGACATACTTATGG+AGG | 0.600216 | 5.1:+2029797 | MS.gene21866:CDS |
| GTCAAACCGAGCTTAGCAGT+GGG | 0.600788 | 5.1:+2030849 | MS.gene21866:CDS |
| GGGGCCATGTATGGTTGGGA+AGG | 0.600879 | 5.1:-2032081 | None:intergenic |
| CAGCAAGGATCACAATCAGT+TGG | 0.603916 | 5.1:+2030615 | MS.gene21866:CDS |
| TTCTCCATTAAGATCAACAC+TGG | 0.606092 | 5.1:-2031965 | None:intergenic |
| GTCACTGACATACTTATGGA+GGG | 0.607377 | 5.1:+2029798 | MS.gene21866:CDS |
| TCACGCATTGAGCTCTTCAG+GGG | 0.610326 | 5.1:-2030332 | None:intergenic |
| AATCAGTTTCATATCCCTGG+TGG | 0.611448 | 5.1:+2032012 | MS.gene21866:CDS |
| GCAAGTCCCTAACAAGGTCG+AGG | 0.613179 | 5.1:-2029854 | None:intergenic |
| ACATACTTATGGAGGGACAG+TGG | 0.615041 | 5.1:+2029805 | MS.gene21866:CDS |
| TAATGTGGTCACTGTAGGAG+TGG | 0.615046 | 5.1:-2029017 | None:intergenic |
| GTCGCTCTAGCCATGATCGA+AGG | 0.616148 | 5.1:-2030524 | None:intergenic |
| GGCCCCTTTGAATTATGGAG+AGG | 0.617640 | 5.1:+2032098 | MS.gene21866:CDS |
| ATCAGTTTCATATCCCTGGT+GGG | 0.620386 | 5.1:+2032013 | MS.gene21866:CDS |
| ATGAGGTTGAAGACATATGC+TGG | 0.621421 | 5.1:+2028635 | MS.gene21866:CDS |
| GGTCAAACCGAGCTTAGCAG+TGG | 0.626933 | 5.1:+2030848 | MS.gene21866:CDS |
| GCCAAGAGAAGTGTTGATGA+CGG | 0.627322 | 5.1:+2032347 | MS.gene21866:CDS |
| TTGCAACTGATAATTTGAGT+CGG | 0.631698 | 5.1:+2030873 | MS.gene21866:CDS |
| TTGTGTAGAGGAACATGATG+AGG | 0.632219 | 5.1:+2028618 | None:intergenic |
| ACAATGCCGTGACCATCGCA+AGG | 0.632907 | 5.1:-2028940 | None:intergenic |
| AGAAAATGGAAGTGTCCCGT+TGG | 0.633336 | 5.1:-2032057 | None:intergenic |
| GTACCGTACAAAAGAAGTTG+CGG | 0.642566 | 5.1:-2030963 | None:intergenic |
| ATTCTTGGGTAATCTTCGAG+AGG | 0.645712 | 5.1:+2028823 | MS.gene21866:CDS |
| GCTTAATGAGCAATCATGGA+GGG | 0.653113 | 5.1:+2028859 | MS.gene21866:CDS |
| TGAAGCATTTGATACAAACA+TGG | 0.654649 | 5.1:+2029110 | MS.gene21866:CDS |
| ACTGGTAAATTCAGCAACCG+GGG | 0.673635 | 5.1:-2031947 | None:intergenic |
| AATGGAACAACTGTTGCTGG+AGG | 0.675922 | 5.1:+2030591 | MS.gene21866:CDS |
| AGTGCAGCAAGTCCCTAACA+AGG | 0.676461 | 5.1:-2029860 | None:intergenic |
| GGCTTAATGAGCAATCATGG+AGG | 0.679748 | 5.1:+2028858 | MS.gene21866:CDS |
| TAATGAGCAATCATGGAGGG+AGG | 0.688793 | 5.1:+2028862 | MS.gene21866:CDS |
| GCACCATTATCAGAAAGCAG+AGG | 0.712334 | 5.1:+2032371 | MS.gene21866:CDS |
| GTACATTTATTGGCCCACCA+GGG | 0.713685 | 5.1:-2032026 | None:intergenic |
| TCAAACCGAGCTTAGCAGTG+GGG | 0.718156 | 5.1:+2030850 | MS.gene21866:CDS |
| CCCCTCTCCATAATTCAAAG+GGG | 0.721782 | 5.1:-2032100 | None:intergenic |
| CTGGTAAATTCAGCAACCGG+GGG | 0.723020 | 5.1:-2031946 | None:intergenic |
| GCAGCCAAGAAACTGATATG+CGG | 0.738645 | 5.1:+2030480 | MS.gene21866:CDS |
| CGTACAAAAGAAGTTGCGGG+AGG | 0.739850 | 5.1:-2030959 | None:intergenic |
| ACAGAATCTGCAGAGCACAG+AGG | 0.760547 | 5.1:+2032325 | MS.gene21866:CDS |
| GGATAATTAGTGTACCCAGG+AGG | 0.762660 | 5.1:-2031925 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCTTATTCATTTTATTT+TGG | + | chr5.1:2030111-2030130 | MS.gene21866:intron | 10.0% |
| !! | TGTGTAAATACAAATAAAAT+AGG | - | chr5.1:2029650-2029669 | None:intergenic | 15.0% |
| !! | TTCATAATTAAAAATGAACT+GGG | + | chr5.1:2029273-2029292 | MS.gene21866:intron | 15.0% |
| !! | TTTCATAATTAAAAATGAAC+TGG | + | chr5.1:2029272-2029291 | MS.gene21866:intron | 15.0% |
| !! | AAAAAATAAGCAAATCCAAT+AGG | - | chr5.1:2031013-2031032 | None:intergenic | 20.0% |
| !! | AAAAATAAGCAAATCCAATA+GGG | - | chr5.1:2031012-2031031 | None:intergenic | 20.0% |
| !! | AAAAGATACAATTCGAATAT+GGG | - | chr5.1:2029044-2029063 | None:intergenic | 20.0% |
| !! | AAATAATACTATCAGCAATT+AGG | - | chr5.1:2029406-2029425 | None:intergenic | 20.0% |
| !! | AATAATACTATCAGCAATTA+GGG | - | chr5.1:2029405-2029424 | None:intergenic | 20.0% |
| !! | AGATTTACTTATTTAACCAT+TGG | + | chr5.1:2030001-2030020 | MS.gene21866:intron | 20.0% |
| !! | AGTGGAAAATAAATAATCTT+AGG | - | chr5.1:2031578-2031597 | None:intergenic | 20.0% |
| !! | GATTTACTTATTTAACCATT+GGG | + | chr5.1:2030002-2030021 | MS.gene21866:intron | 20.0% |
| !! | TAAAAGATACAATTCGAATA+TGG | - | chr5.1:2029045-2029064 | None:intergenic | 20.0% |
| !! | TATCAATTTACATAATACCT+AGG | + | chr5.1:2029567-2029586 | MS.gene21866:intron | 20.0% |
| !!! | AAGCATGTAATTTTAATCTT+AGG | + | chr5.1:2031543-2031562 | MS.gene21866:intron | 20.0% |
| !!! | AGCATGTAATTTTAATCTTA+GGG | + | chr5.1:2031544-2031563 | MS.gene21866:intron | 20.0% |
| !!! | ATGTATGAATTTTCACATAA+TGG | + | chr5.1:2029246-2029265 | MS.gene21866:intron | 20.0% |
| !!! | ATTCGAATTGTATCTTTTAT+GGG | + | chr5.1:2029046-2029065 | MS.gene21866:CDS | 20.0% |
| !!! | GTTTTAATACCAAGTAATTA+TGG | + | chr5.1:2031882-2031901 | MS.gene21866:intron | 20.0% |
| !!! | TATTCGAATTGTATCTTTTA+TGG | + | chr5.1:2029045-2029064 | MS.gene21866:CDS | 20.0% |
| ! | AATGAAGTAAAATATGTGAG+AGG | - | chr5.1:2031492-2031511 | None:intergenic | 25.0% |
| ! | ACATACAGTAATATGATTCA+CGG | - | chr5.1:2029480-2029499 | None:intergenic | 25.0% |
| ! | ATAATACTATCAGCAATTAG+GGG | - | chr5.1:2029404-2029423 | None:intergenic | 25.0% |
| ! | ATTTCATTAGTTCCAAAAGA+AGG | - | chr5.1:2031232-2031251 | None:intergenic | 25.0% |
| ! | TAAAAAAGATAACTAGTGGA+AGG | - | chr5.1:2030154-2030173 | None:intergenic | 25.0% |
| ! | TAAAAATAGTAATCGCAAAG+AGG | - | chr5.1:2028898-2028917 | None:intergenic | 25.0% |
| ! | TAGGTAAAAAAGATAACTAG+TGG | - | chr5.1:2030158-2030177 | None:intergenic | 25.0% |
| ! | TCAAAACAAGAAAACAATAG+TGG | - | chr5.1:2031596-2031615 | None:intergenic | 25.0% |
| ! | TGAAAATTCATACATCAACA+TGG | - | chr5.1:2029241-2029260 | None:intergenic | 25.0% |
| ! | TTACACATCTGTTTACTATT+CGG | + | chr5.1:2029663-2029682 | MS.gene21866:intron | 25.0% |
| ! | TTCTTTATACTTGAGTGTTT+GGG | + | chr5.1:2029693-2029712 | MS.gene21866:intron | 25.0% |
| ! | TTTCATTAGTTCCAAAAGAA+GGG | - | chr5.1:2031231-2031250 | None:intergenic | 25.0% |
| !! | TGCACTTAAAATCTAGTTTA+CGG | + | chr5.1:2030026-2030045 | MS.gene21866:intron | 25.0% |
| !! | TTGCTTTGTCAATTTAACTT+GGG | + | chr5.1:2030807-2030826 | MS.gene21866:intron | 25.0% |
| !!! | ACTAACTAAAAAGGTATTCT+TGG | + | chr5.1:2028808-2028827 | MS.gene21866:CDS | 25.0% |
| !!! | ACTGACAAGTTTTATGAATA+CGG | - | chr5.1:2030689-2030708 | None:intergenic | 25.0% |
| !!! | ATTGAATTGATGTCATTTTC+AGG | + | chr5.1:2030727-2030746 | MS.gene21866:intron | 25.0% |
| !!! | CAATATCAACAGTGTTTTTT+TGG | + | chr5.1:2029301-2029320 | MS.gene21866:intron | 25.0% |
| !!! | CTAACTAAAAAGGTATTCTT+GGG | + | chr5.1:2028809-2028828 | MS.gene21866:CDS | 25.0% |
| !!! | TAAAGCAAAGCAACATTTTT+TGG | + | chr5.1:2031789-2031808 | MS.gene21866:intron | 25.0% |
| !!! | TCTTTGCGATTACTATTTTT+AGG | + | chr5.1:2028897-2028916 | MS.gene21866:CDS | 25.0% |
| !!! | TTTGAATTGCATATTTTGAG+TGG | + | chr5.1:2032228-2032247 | MS.gene21866:intron | 25.0% |
| AAAATATGTGAGAGGAATTC+CGG | - | chr5.1:2031484-2031503 | None:intergenic | 30.0% | |
| AAATGCTATCAAGAAGAAGA+AGG | - | chr5.1:2029075-2029094 | None:intergenic | 30.0% | |
| AATTCGAATATGGGATAATG+TGG | - | chr5.1:2029035-2029054 | None:intergenic | 30.0% | |
| AATTCTACAACAACAGATTG+AGG | + | chr5.1:2032173-2032192 | MS.gene21866:CDS | 30.0% | |
| ACGTAATTGACAATGATACT+TGG | + | chr5.1:2030049-2030068 | MS.gene21866:intron | 30.0% | |
| AGTTGATCTATCAGAAACTA+TGG | + | chr5.1:2030187-2030206 | MS.gene21866:intron | 30.0% | |
| ATACAGTAATATGATTCACG+GGG | - | chr5.1:2029478-2029497 | None:intergenic | 30.0% | |
| ATACTCTTCAGAATAGTTCT+CGG | + | chr5.1:2031455-2031474 | MS.gene21866:intron | 30.0% | |
| CATACAGTAATATGATTCAC+GGG | - | chr5.1:2029479-2029498 | None:intergenic | 30.0% | |
| CGTAATTGACAATGATACTT+GGG | + | chr5.1:2030050-2030069 | MS.gene21866:intron | 30.0% | |
| CTTCAAAAACTTTCTCGAAA+AGG | - | chr5.1:2031675-2031694 | None:intergenic | 30.0% | |
| CTTGCTTTGTCAATTTAACT+TGG | + | chr5.1:2030806-2030825 | MS.gene21866:intron | 30.0% | |
| GAGAAAAAGCCATAATTACT+TGG | - | chr5.1:2031894-2031913 | None:intergenic | 30.0% | |
| GTAATTGACAATGATACTTG+GGG | + | chr5.1:2030051-2030070 | MS.gene21866:intron | 30.0% | |
| GTTCTTTATACTTGAGTGTT+TGG | + | chr5.1:2029692-2029711 | MS.gene21866:intron | 30.0% | |
| TAGGAGGAAAAGAAATAAGA+AGG | - | chr5.1:2029173-2029192 | None:intergenic | 30.0% | |
| TATGTGGCAACTAACTAAAA+AGG | + | chr5.1:2028799-2028818 | MS.gene21866:CDS | 30.0% | |
| TCAAAAATAGCCAATCCAAA+CGG | + | chr5.1:2031196-2031215 | MS.gene21866:intron | 30.0% | |
| TGCAGAATCTGTTTAAAAGT+GGG | - | chr5.1:2032296-2032315 | None:intergenic | 30.0% | |
| TGGTTATTATGTGTGTTATG+TGG | + | chr5.1:2028783-2028802 | MS.gene21866:CDS | 30.0% | |
| TGTTAATTAAGGCTTTGCAT+TGG | + | chr5.1:2028963-2028982 | MS.gene21866:CDS | 30.0% | |
| TTGCAACTGATAATTTGAGT+CGG | + | chr5.1:2030873-2030892 | MS.gene21866:CDS | 30.0% | |
| TTGCAGAATCTGTTTAAAAG+TGG | - | chr5.1:2032297-2032316 | None:intergenic | 30.0% | |
| ! | TAGATCAACTTCAAGTTAGT+AGG | - | chr5.1:2030177-2030196 | None:intergenic | 30.0% |
| ! | TATACTCTATACCTAGCTTT+AGG | - | chr5.1:2031401-2031420 | None:intergenic | 30.0% |
| ! | TGAAGCATTTGATACAAACA+TGG | + | chr5.1:2029110-2029129 | MS.gene21866:CDS | 30.0% |
| ! | TTTTAGCAAACATGTGAACT+AGG | - | chr5.1:2031758-2031777 | None:intergenic | 30.0% |
| !! | ATTCTGAAGAGTATTACACA+AGG | - | chr5.1:2031449-2031468 | None:intergenic | 30.0% |
| !! | CTTTTCGAGAAAGTTTTTGA+AGG | + | chr5.1:2031673-2031692 | MS.gene21866:intron | 30.0% |
| !! | TTCTTATTTCTTTTCCTCCT+AGG | + | chr5.1:2029172-2029191 | MS.gene21866:intron | 30.0% |
| !! | TTGTCAATTTAACTTGGGAT+AGG | + | chr5.1:2030812-2030831 | MS.gene21866:intron | 30.0% |
| !! | TTTACCAGTGTTGATCTTAA+TGG | + | chr5.1:2031961-2031980 | MS.gene21866:CDS | 30.0% |
| !!! | AACAGTGTTTTTTTGGCATA+GGG | + | chr5.1:2029308-2029327 | MS.gene21866:intron | 30.0% |
| AAATATCTCAAAGTCTCAGC+TGG | + | chr5.1:2032137-2032156 | MS.gene21866:CDS | 35.0% | |
| AATCTGTTTAAAAGTGGGAG+AGG | - | chr5.1:2032291-2032310 | None:intergenic | 35.0% | |
| AGTTCCAAAAGAAGGGATAT+TGG | - | chr5.1:2031224-2031243 | None:intergenic | 35.0% | |
| AGTTCCAAACAAAGGGATAT+TGG | - | chr5.1:2031329-2031348 | None:intergenic | 35.0% | |
| ATAAATAATCTTAGGCCGTC+AGG | - | chr5.1:2031570-2031589 | None:intergenic | 35.0% | |
| ATACATCAACATGGCTTAGT+TGG | - | chr5.1:2029232-2029251 | None:intergenic | 35.0% | |
| ATCTGTTTAAAAGTGGGAGA+GGG | - | chr5.1:2032290-2032309 | None:intergenic | 35.0% | |
| CAAAAATAGCCAATCCAAAC+GGG | + | chr5.1:2031197-2031216 | MS.gene21866:intron | 35.0% | |
| CAAAATCAGTTTCATATCCC+TGG | + | chr5.1:2032009-2032028 | MS.gene21866:CDS | 35.0% | |
| CATAAGCAGTTCCAAACAAA+GGG | - | chr5.1:2031336-2031355 | None:intergenic | 35.0% | |
| CATAATACCTAGGCAGATTA+TGG | + | chr5.1:2029577-2029596 | MS.gene21866:intron | 35.0% | |
| CTATGTCACTGACATACTTA+TGG | + | chr5.1:2029794-2029813 | MS.gene21866:CDS | 35.0% | |
| CTTGTCAGTAATATGCAAGA+TGG | + | chr5.1:2030700-2030719 | MS.gene21866:intron | 35.0% | |
| GAAAGCAAAGAACAGTGAAA+CGG | - | chr5.1:2029143-2029162 | None:intergenic | 35.0% | |
| GAAGGCAATGAACATGAAAA+AGG | - | chr5.1:2030509-2030528 | None:intergenic | 35.0% | |
| GATAATCACTCACTGTATGT+AGG | + | chr5.1:2030662-2030681 | MS.gene21866:intron | 35.0% | |
| GTTCCAAAAGAAGGGATATT+GGG | - | chr5.1:2031223-2031242 | None:intergenic | 35.0% | |
| GTTCCAAACAAAGGGATATT+GGG | - | chr5.1:2031328-2031347 | None:intergenic | 35.0% | |
| TACATCAACATGGCTTAGTT+GGG | - | chr5.1:2029231-2029250 | None:intergenic | 35.0% | |
| TACCATGCATTTAACAGTAG+AGG | + | chr5.1:2028689-2028708 | MS.gene21866:CDS | 35.0% | |
| TCATAAGCAGTTCCAAACAA+AGG | - | chr5.1:2031337-2031356 | None:intergenic | 35.0% | |
| TGATCTAACTACCTAAAGCT+AGG | + | chr5.1:2031387-2031406 | MS.gene21866:intron | 35.0% | |
| TTCAACTTCCAAGATCAGTT+TGG | + | chr5.1:2028739-2028758 | MS.gene21866:CDS | 35.0% | |
| TTCTCCATTAAGATCAACAC+TGG | - | chr5.1:2031968-2031987 | None:intergenic | 35.0% | |
| TTTGTACTATGCATGCTATC+TGG | + | chr5.1:2029615-2029634 | MS.gene21866:intron | 35.0% | |
| ! | AAAGAAGAAGCACAGATACA+TGG | - | chr5.1:2029889-2029908 | None:intergenic | 35.0% |
| ! | AACAGTTGTTCCATTTTCTG+GGG | - | chr5.1:2030586-2030605 | None:intergenic | 35.0% |
| ! | AATTAAGGCTTTGCATTGGT+TGG | + | chr5.1:2028967-2028986 | MS.gene21866:CDS | 35.0% |
| ! | ATTTTACCTCGACCTTGTTA+GGG | + | chr5.1:2029848-2029867 | MS.gene21866:CDS | 35.0% |
| ! | CAACAGTTGTTCCATTTTCT+GGG | - | chr5.1:2030587-2030606 | None:intergenic | 35.0% |
| ! | CACGGCATTGTTGTTAATTA+AGG | + | chr5.1:2028952-2028971 | MS.gene21866:CDS | 35.0% |
| ! | TCTTAGTTTGATGGCAACTT+TGG | + | chr5.1:2028658-2028677 | MS.gene21866:CDS | 35.0% |
| ! | TTGGTGCTTCTTCTTAACAT+GGG | + | chr5.1:2028758-2028777 | MS.gene21866:CDS | 35.0% |
| !! | AGATTTTAAGTGCAACCCAA+TGG | - | chr5.1:2030020-2030039 | None:intergenic | 35.0% |
| !! | AGCTGAGACTTTGAGATATT+TGG | - | chr5.1:2032138-2032157 | None:intergenic | 35.0% |
| !! | ATATGCTGGTCTTAGTTTGA+TGG | + | chr5.1:2028649-2028668 | MS.gene21866:CDS | 35.0% |
| !! | ATTTTAATCTTAGGGCCTGA+CGG | + | chr5.1:2031552-2031571 | MS.gene21866:intron | 35.0% |
| !! | TTTGGTGCTTCTTCTTAACA+TGG | + | chr5.1:2028757-2028776 | MS.gene21866:CDS | 35.0% |
| !!! | CAACAGTGTTTTTTTGGCAT+AGG | + | chr5.1:2029307-2029326 | MS.gene21866:intron | 35.0% |
| !!! | TGCGATTACTATTTTTAGGC+AGG | + | chr5.1:2028901-2028920 | MS.gene21866:CDS | 35.0% |
| AAATGTACCCTTTCCTCCAA+CGG | + | chr5.1:2032041-2032060 | MS.gene21866:CDS | 40.0% | |
| AACCCCTCTCCATAATTCAA+AGG | - | chr5.1:2032105-2032124 | None:intergenic | 40.0% | |
| AATCAGTTTCATATCCCTGG+TGG | + | chr5.1:2032012-2032031 | MS.gene21866:CDS | 40.0% | |
| AATTCCCTTGCACCTAATAC+GGG | + | chr5.1:2030210-2030229 | MS.gene21866:CDS | 40.0% | |
| ACACTGGTAAATTCAGCAAC+CGG | - | chr5.1:2031952-2031971 | None:intergenic | 40.0% | |
| ACCCCTCTCCATAATTCAAA+GGG | - | chr5.1:2032104-2032123 | None:intergenic | 40.0% | |
| AGAGGCTTAATGAGCAATCA+TGG | + | chr5.1:2028855-2028874 | MS.gene21866:CDS | 40.0% | |
| AGGTATAGAGTATAGCACCA+AGG | + | chr5.1:2031407-2031426 | MS.gene21866:intron | 40.0% | |
| AGTATGAGCAACTCATCAGT+AGG | - | chr5.1:2029200-2029219 | None:intergenic | 40.0% | |
| ATCAGTTTCATATCCCTGGT+GGG | + | chr5.1:2032013-2032032 | MS.gene21866:CDS | 40.0% | |
| ATGAAATCTGTGCTATGCTG+TGG | + | chr5.1:2031353-2031372 | MS.gene21866:intron | 40.0% | |
| ATGAGGTTGAAGACATATGC+TGG | + | chr5.1:2028635-2028654 | MS.gene21866:CDS | 40.0% | |
| ATGGTTGGGAAGGAAGAAAA+TGG | - | chr5.1:2032074-2032093 | None:intergenic | 40.0% | |
| ATGTTCATTGCCTTCGATCA+TGG | + | chr5.1:2030514-2030533 | MS.gene21866:CDS | 40.0% | |
| ATTCTTGGGTAATCTTCGAG+AGG | + | chr5.1:2028823-2028842 | MS.gene21866:CDS | 40.0% | |
| CAATCAGTTGGTCATCAACA+TGG | + | chr5.1:2030627-2030646 | MS.gene21866:CDS | 40.0% | |
| CTCAAATTTACAGACCTCCT+GGG | + | chr5.1:2031911-2031930 | MS.gene21866:intron | 40.0% | |
| GAAAATGGAACAACTGTTGC+TGG | + | chr5.1:2030588-2030607 | MS.gene21866:CDS | 40.0% | |
| GAATTCCCTTGCACCTAATA+CGG | + | chr5.1:2030209-2030228 | MS.gene21866:CDS | 40.0% | |
| GCATTTGATACAAACATGGC+AGG | + | chr5.1:2029114-2029133 | MS.gene21866:CDS | 40.0% | |
| GCTTAATGAGCAATCATGGA+GGG | + | chr5.1:2028859-2028878 | MS.gene21866:CDS | 40.0% | |
| GCTTCTTCTTAACATGGGTT+TGG | + | chr5.1:2028763-2028782 | MS.gene21866:CDS | 40.0% | |
| GTACCGTACAAAAGAAGTTG+CGG | - | chr5.1:2030966-2030985 | None:intergenic | 40.0% | |
| GTCACTGACATACTTATGGA+GGG | + | chr5.1:2029798-2029817 | MS.gene21866:CDS | 40.0% | |
| GTTGAAAGATACACCATTGC+CGG | - | chr5.1:2028725-2028744 | None:intergenic | 40.0% | |
| TAATTCAAAGGGGCCATGTA+TGG | - | chr5.1:2032093-2032112 | None:intergenic | 40.0% | |
| TACATGGCCCCTTTGAATTA+TGG | + | chr5.1:2032093-2032112 | MS.gene21866:CDS | 40.0% | |
| TACCGTACAAAAGAAGTTGC+GGG | - | chr5.1:2030965-2030984 | None:intergenic | 40.0% | |
| TACGGTACGGTGTTTATGTT+CGG | + | chr5.1:2030978-2030997 | MS.gene21866:intron | 40.0% | |
| TAGCAAACATGTGAACTAGG+CGG | - | chr5.1:2031755-2031774 | None:intergenic | 40.0% | |
| TAGTACAAATGCTTTCCCTG+TGG | - | chr5.1:2029604-2029623 | None:intergenic | 40.0% | |
| TCGAGGTAAAATGTGAAGAC+TGG | - | chr5.1:2029840-2029859 | None:intergenic | 40.0% | |
| TCTCAAATTTACAGACCTCC+TGG | + | chr5.1:2031910-2031929 | MS.gene21866:intron | 40.0% | |
| TCTGTTTAAAAGTGGGAGAG+GGG | - | chr5.1:2032289-2032308 | None:intergenic | 40.0% | |
| TCTTCTTCGGAGATTCAAGA+TGG | + | chr5.1:2032404-2032423 | MS.gene21866:CDS | 40.0% | |
| TGTCACTGACATACTTATGG+AGG | + | chr5.1:2029797-2029816 | MS.gene21866:CDS | 40.0% | |
| TTGAAGGATTGAGTATGCTC+TGG | + | chr5.1:2031689-2031708 | MS.gene21866:intron | 40.0% | |
| TTGCCTCTGCTTTCTGATAA+TGG | - | chr5.1:2032377-2032396 | None:intergenic | 40.0% | |
| ! | ACAGTTGTTCCATTTTCTGG+GGG | - | chr5.1:2030585-2030604 | None:intergenic | 40.0% |
| ! | CATTTTACCTCGACCTTGTT+AGG | + | chr5.1:2029847-2029866 | MS.gene21866:CDS | 40.0% |
| ! | GCAACAGTTGTTCCATTTTC+TGG | - | chr5.1:2030588-2030607 | None:intergenic | 40.0% |
| ! | GCAACTTCTTTTGTACGGTA+CGG | + | chr5.1:2030965-2030984 | MS.gene21866:intron | 40.0% |
| ! | GGAGGAAAGGGTACATTTAT+TGG | - | chr5.1:2032039-2032058 | None:intergenic | 40.0% |
| !! | AAGAAGCACCAAACTGATCT+TGG | - | chr5.1:2028750-2028769 | None:intergenic | 40.0% |
| !! | AAGCTCTCTGTTTCTATCTC+AGG | + | chr5.1:2029721-2029740 | MS.gene21866:intron | 40.0% |
| !! | ATTTAACTTGGGATAGGCAC+TGG | + | chr5.1:2030818-2030837 | MS.gene21866:intron | 40.0% |
| !! | CTGATTTTGTGCTTGTTGAC+TGG | - | chr5.1:2031998-2032017 | None:intergenic | 40.0% |
| AATGGAACAACTGTTGCTGG+AGG | + | chr5.1:2030591-2030610 | MS.gene21866:CDS | 45.0% | |
| AATGTACCCTTTCCTCCAAC+GGG | + | chr5.1:2032042-2032061 | MS.gene21866:CDS | 45.0% | |
| ACACCATTGCCGGATAAAAC+TGG | - | chr5.1:2028715-2028734 | None:intergenic | 45.0% | |
| ACATACTTATGGAGGGACAG+TGG | + | chr5.1:2029805-2029824 | MS.gene21866:CDS | 45.0% | |
| ACTGGTAAATTCAGCAACCG+GGG | - | chr5.1:2031950-2031969 | None:intergenic | 45.0% | |
| CACAAGGCTCTCATATGAAC+AGG | - | chr5.1:2031433-2031452 | None:intergenic | 45.0% | |
| CACTGGTAAATTCAGCAACC+GGG | - | chr5.1:2031951-2031970 | None:intergenic | 45.0% | |
| CAGCAAGGATCACAATCAGT+TGG | + | chr5.1:2030615-2030634 | MS.gene21866:CDS | 45.0% | |
| CATACTTATGGAGGGACAGT+GGG | + | chr5.1:2029806-2029825 | MS.gene21866:CDS | 45.0% | |
| CCCCTCTCCATAATTCAAAG+GGG | - | chr5.1:2032103-2032122 | None:intergenic | 45.0% | |
| CCCCTTTGAATTATGGAGAG+GGG | + | chr5.1:2032100-2032119 | MS.gene21866:CDS | 45.0% | |
| CTCAGTTACATTCCTTGCGA+TGG | + | chr5.1:2028928-2028947 | MS.gene21866:CDS | 45.0% | |
| GCACCATTATCAGAAAGCAG+AGG | + | chr5.1:2032371-2032390 | MS.gene21866:CDS | 45.0% | |
| GCAGCCAAGAAACTGATATG+CGG | + | chr5.1:2030480-2030499 | MS.gene21866:CDS | 45.0% | |
| GCCCCTTTGAATTATGGAGA+GGG | + | chr5.1:2032099-2032118 | MS.gene21866:CDS | 45.0% | |
| GGATAATTAGTGTACCCAGG+AGG | - | chr5.1:2031928-2031947 | None:intergenic | 45.0% | |
| GGCCTCTACTGTTAAATGCA+TGG | - | chr5.1:2028694-2028713 | None:intergenic | 45.0% | |
| GGCTTAATGAGCAATCATGG+AGG | + | chr5.1:2028858-2028877 | MS.gene21866:CDS | 45.0% | |
| GGGAGCTATACGAGACATTT+AGG | + | chr5.1:2030230-2030249 | MS.gene21866:CDS | 45.0% | |
| GGGGTCTAACATGTAATGTC+TGG | - | chr5.1:2029459-2029478 | None:intergenic | 45.0% | |
| GTACATTTATTGGCCCACCA+GGG | - | chr5.1:2032029-2032048 | None:intergenic | 45.0% | |
| GTGTCCGCATATCAGTTTCT+TGG | - | chr5.1:2030487-2030506 | None:intergenic | 45.0% | |
| TAATGAGCAATCATGGAGGG+AGG | + | chr5.1:2028862-2028881 | MS.gene21866:CDS | 45.0% | |
| TAATGTGGTCACTGTAGGAG+TGG | - | chr5.1:2029020-2029039 | None:intergenic | 45.0% | |
| TACATTCCTTGCGATGGTCA+CGG | + | chr5.1:2028934-2028953 | MS.gene21866:CDS | 45.0% | |
| TAGGCAGATTATGGACCACA+GGG | + | chr5.1:2029586-2029605 | MS.gene21866:intron | 45.0% | |
| TCAGAATAGTTCTCGGTCTC+CGG | + | chr5.1:2031462-2031481 | MS.gene21866:intron | 45.0% | |
| TCTCGTATAGCTCCCGTATT+AGG | - | chr5.1:2030225-2030244 | None:intergenic | 45.0% | |
| TCTTCCTTCCCAACCATACA+TGG | + | chr5.1:2032077-2032096 | MS.gene21866:CDS | 45.0% | |
| TGGGATAATGTGGTCACTGT+AGG | - | chr5.1:2029025-2029044 | None:intergenic | 45.0% | |
| TGGGTACACTAATTATCCCC+CGG | + | chr5.1:2031930-2031949 | MS.gene21866:CDS | 45.0% | |
| TTGGTTGTACCCCCAGAAAA+TGG | + | chr5.1:2030573-2030592 | MS.gene21866:CDS | 45.0% | |
| ! | AGGCAAGCTTAGCTCTTCTT+CGG | + | chr5.1:2032391-2032410 | MS.gene21866:CDS | 45.0% |
| ! | CTCCCGCAACTTCTTTTGTA+CGG | + | chr5.1:2030960-2030979 | MS.gene21866:CDS | 45.0% |
| !! | AGAAAATGGAAGTGTCCCGT+TGG | - | chr5.1:2032060-2032079 | None:intergenic | 45.0% |
| !! | ATTTTCTGGGGGTACAACCA+AGG | - | chr5.1:2030574-2030593 | None:intergenic | 45.0% |
| !! | CAGTAGAGGCCAGTTTTATC+CGG | + | chr5.1:2028703-2028722 | MS.gene21866:CDS | 45.0% |
| !! | GCCAAGAGAAGTGTTGATGA+CGG | + | chr5.1:2032347-2032366 | MS.gene21866:CDS | 45.0% |
| !!! | AATTTTACATATTTTTTAAA+TGG | + | chr5.1:2030409-2030428 | MS.gene21866:intron | 5.0% |
| AAAGGGATATTGGGCCCGTT+TGG | - | chr5.1:2031319-2031338 | None:intergenic | 50.0% | |
| AAGTGTCCCGTTGGAGGAAA+GGG | - | chr5.1:2032051-2032070 | None:intergenic | 50.0% | |
| AATCTGTGCTATGCTGTGGC+TGG | + | chr5.1:2031357-2031376 | MS.gene21866:intron | 50.0% | |
| ACAACCAAGGCTCTGCAAGT+AGG | - | chr5.1:2030561-2030580 | None:intergenic | 50.0% | |
| ACAGAATCTGCAGAGCACAG+AGG | + | chr5.1:2032325-2032344 | MS.gene21866:CDS | 50.0% | |
| ACTCACGCATTGAGCTCTTC+AGG | - | chr5.1:2030337-2030356 | None:intergenic | 50.0% | |
| AGCTCCCGTATTAGGTGCAA+GGG | - | chr5.1:2030217-2030236 | None:intergenic | 50.0% | |
| AGTGCAGCAAGTCCCTAACA+AGG | - | chr5.1:2029863-2029882 | None:intergenic | 50.0% | |
| CAAAGGGGCCATGTATGGTT+GGG | - | chr5.1:2032088-2032107 | None:intergenic | 50.0% | |
| CAACCAAGGCTCTGCAAGTA+GGG | - | chr5.1:2030560-2030579 | None:intergenic | 50.0% | |
| CAACTCATCAGTAGGAGCCT+AGG | - | chr5.1:2029192-2029211 | None:intergenic | 50.0% | |
| CGGTGTTTATGTTCGGTCGT+TGG | + | chr5.1:2030985-2031004 | MS.gene21866:intron | 50.0% | |
| CGTACAAAAGAAGTTGCGGG+AGG | - | chr5.1:2030962-2030981 | None:intergenic | 50.0% | |
| CTAGGCAGATTATGGACCAC+AGG | + | chr5.1:2029585-2029604 | MS.gene21866:intron | 50.0% | |
| CTCACGCATTGAGCTCTTCA+GGG | - | chr5.1:2030336-2030355 | None:intergenic | 50.0% | |
| CTGGTAAATTCAGCAACCGG+GGG | - | chr5.1:2031949-2031968 | None:intergenic | 50.0% | |
| CTGTGGTCCATAATCTGCCT+AGG | - | chr5.1:2029587-2029606 | None:intergenic | 50.0% | |
| GATATTGGGCCCGTTTGGAT+TGG | - | chr5.1:2031209-2031228 | None:intergenic | 50.0% | |
| GCAATCATGGAGGGAGGTTA+TGG | + | chr5.1:2028868-2028887 | MS.gene21866:CDS | 50.0% | |
| GCCGTCATCAACACTTCTCT+TGG | - | chr5.1:2032351-2032370 | None:intergenic | 50.0% | |
| GCTCTCATATGAACAGGCCT+TGG | - | chr5.1:2031427-2031446 | None:intergenic | 50.0% | |
| GGCCCCTTTGAATTATGGAG+AGG | + | chr5.1:2032098-2032117 | MS.gene21866:CDS | 50.0% | |
| GGGCCCAATATCCCTTTGTT+TGG | + | chr5.1:2031322-2031341 | MS.gene21866:intron | 50.0% | |
| GGGGGATAATTAGTGTACCC+AGG | - | chr5.1:2031931-2031950 | None:intergenic | 50.0% | |
| GGTACATTTATTGGCCCACC+AGG | - | chr5.1:2032030-2032049 | None:intergenic | 50.0% | |
| GTCAAACCGAGCTTAGCAGT+GGG | + | chr5.1:2030849-2030868 | MS.gene21866:CDS | 50.0% | |
| TAGCTCCCGTATTAGGTGCA+AGG | - | chr5.1:2030218-2030237 | None:intergenic | 50.0% | |
| TCAAACCGAGCTTAGCAGTG+GGG | + | chr5.1:2030850-2030869 | MS.gene21866:CDS | 50.0% | |
| TCAAAGGGGCCATGTATGGT+TGG | - | chr5.1:2032089-2032108 | None:intergenic | 50.0% | |
| TCACGCATTGAGCTCTTCAG+GGG | - | chr5.1:2030335-2030354 | None:intergenic | 50.0% | |
| ! | GGGCCCAATATCCCTTCTTT+TGG | + | chr5.1:2031217-2031236 | MS.gene21866:intron | 50.0% |
| !! | AAATGGAAGTGTCCCGTTGG+AGG | - | chr5.1:2032057-2032076 | None:intergenic | 50.0% |
| !! | AGGCCAGTTTTATCCGGCAA+TGG | + | chr5.1:2028709-2028728 | MS.gene21866:CDS | 50.0% |
| ACAATGCCGTGACCATCGCA+AGG | - | chr5.1:2028943-2028962 | None:intergenic | 55.0% | |
| ACTGTTGCTGGAGGTCAGCA+AGG | + | chr5.1:2030600-2030619 | MS.gene21866:CDS | 55.0% | |
| AGCTCTTCAGGGGTTGCTTC+TGG | - | chr5.1:2030325-2030344 | None:intergenic | 55.0% | |
| CTCATCAGTAGGAGCCTAGG+AGG | - | chr5.1:2029189-2029208 | None:intergenic | 55.0% | |
| GAAGGGATATTGGGCCCGTT+TGG | - | chr5.1:2031214-2031233 | None:intergenic | 55.0% | |
| GCAAGTCCCTAACAAGGTCG+AGG | - | chr5.1:2029857-2029876 | None:intergenic | 55.0% | |
| GGGTAATCTTCGAGAGGCTG+AGG | + | chr5.1:2028829-2028848 | MS.gene21866:CDS | 55.0% | |
| GGTCAAACCGAGCTTAGCAG+TGG | + | chr5.1:2030848-2030867 | MS.gene21866:CDS | 55.0% | |
| GTCGCTCTAGCCATGATCGA+AGG | - | chr5.1:2030527-2030546 | None:intergenic | 55.0% | |
| GTTCGGTCGTTGGACCCTAT+TGG | + | chr5.1:2030995-2031014 | MS.gene21866:intron | 55.0% | |
| TGCAACCCCACTGCTAAGCT+CGG | - | chr5.1:2030858-2030877 | None:intergenic | 55.0% | |
| TTCGAGAGGCTGAGGTTGAG+AGG | + | chr5.1:2028837-2028856 | MS.gene21866:CDS | 55.0% | |
| TTGCCCTACTTGCAGAGCCT+TGG | + | chr5.1:2030554-2030573 | MS.gene21866:CDS | 55.0% | |
| ! | GAAGTGTCCCGTTGGAGGAA+AGG | - | chr5.1:2032052-2032071 | None:intergenic | 55.0% |
| !! | GGGATAGGCACTGGAAGTAC+AGG | + | chr5.1:2030827-2030846 | MS.gene21866:intron | 55.0% |
| AAGCTGCAGCAGCAGCTGCT+TGG | - | chr5.1:2030913-2030932 | None:intergenic | 60.0% | |
| GGGGCCATGTATGGTTGGGA+AGG | - | chr5.1:2032084-2032103 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 2028632 | 2032436 | 2028632 | ID=MS.gene21866 |
| chr5.1 | mRNA | 2028632 | 2032436 | 2028632 | ID=MS.gene21866.t1;Parent=MS.gene21866 |
| chr5.1 | exon | 2028632 | 2029164 | 2028632 | ID=MS.gene21866.t1.exon1;Parent=MS.gene21866.t1 |
| chr5.1 | CDS | 2028632 | 2029164 | 2028632 | ID=cds.MS.gene21866.t1;Parent=MS.gene21866.t1 |
| chr5.1 | exon | 2029743 | 2029919 | 2029743 | ID=MS.gene21866.t1.exon2;Parent=MS.gene21866.t1 |
| chr5.1 | CDS | 2029743 | 2029919 | 2029743 | ID=cds.MS.gene21866.t1;Parent=MS.gene21866.t1 |
| chr5.1 | exon | 2030201 | 2030350 | 2030201 | ID=MS.gene21866.t1.exon3;Parent=MS.gene21866.t1 |
| chr5.1 | CDS | 2030201 | 2030350 | 2030201 | ID=cds.MS.gene21866.t1;Parent=MS.gene21866.t1 |
| chr5.1 | exon | 2030440 | 2030648 | 2030440 | ID=MS.gene21866.t1.exon4;Parent=MS.gene21866.t1 |
| chr5.1 | CDS | 2030440 | 2030648 | 2030440 | ID=cds.MS.gene21866.t1;Parent=MS.gene21866.t1 |
| chr5.1 | exon | 2030834 | 2030981 | 2030834 | ID=MS.gene21866.t1.exon5;Parent=MS.gene21866.t1 |
| chr5.1 | CDS | 2030834 | 2030981 | 2030834 | ID=cds.MS.gene21866.t1;Parent=MS.gene21866.t1 |
| chr5.1 | exon | 2031924 | 2032194 | 2031924 | ID=MS.gene21866.t1.exon6;Parent=MS.gene21866.t1 |
| chr5.1 | CDS | 2031924 | 2032194 | 2031924 | ID=cds.MS.gene21866.t1;Parent=MS.gene21866.t1 |
| chr5.1 | exon | 2032308 | 2032436 | 2032308 | ID=MS.gene21866.t1.exon7;Parent=MS.gene21866.t1 |
| chr5.1 | CDS | 2032308 | 2032436 | 2032308 | ID=cds.MS.gene21866.t1;Parent=MS.gene21866.t1 |
| Gene Sequence |
| Protein sequence |
