Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22345.t1 | XP_013450049.1 | 97.9 | 1148 | 24 | 0 | 1 | 1148 | 1 | 1148 | 0.00E+00 | 2234.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22345.t1 | Q9SCQ2 | 58.7 | 1158 | 452 | 7 | 1 | 1148 | 1 | 1142 | 0.0e+00 | 1316.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22345.t1 | A0A072U2X8 | 97.9 | 1148 | 24 | 0 | 1 | 1148 | 1 | 1148 | 0.0e+00 | 2234.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene22345 | MS.gene074045 | PPI |
MS.gene22345 | MS.gene47195 | PPI |
MS.gene22345 | MS.gene55545 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22345.t1 | MTR_7g103210 | 97.909 | 1148 | 24 | 0 | 1 | 1148 | 1 | 1148 | 0.0 | 2331 |
MS.gene22345.t1 | MTR_7g103210 | 97.894 | 1092 | 23 | 0 | 1 | 1092 | 1 | 1092 | 0.0 | 2217 |
MS.gene22345.t1 | MTR_2g033040 | 34.489 | 548 | 323 | 9 | 616 | 1148 | 498 | 1024 | 8.80e-100 | 340 |
MS.gene22345.t1 | MTR_4g094708 | 33.886 | 422 | 238 | 14 | 737 | 1145 | 3362 | 3755 | 4.18e-54 | 208 |
MS.gene22345.t1 | MTR_4g094705 | 33.886 | 422 | 238 | 14 | 737 | 1145 | 3341 | 3734 | 6.83e-54 | 207 |
MS.gene22345.t1 | MTR_3g099777 | 36.148 | 379 | 210 | 12 | 780 | 1145 | 3321 | 3680 | 2.75e-53 | 206 |
MS.gene22345.t1 | MTR_5g066710 | 35.884 | 379 | 211 | 12 | 780 | 1145 | 3293 | 3652 | 1.48e-52 | 203 |
MS.gene22345.t1 | MTR_2g025830 | 26.525 | 377 | 251 | 7 | 777 | 1145 | 457 | 815 | 8.01e-34 | 140 |
MS.gene22345.t1 | MTR_4g133120 | 25.000 | 384 | 260 | 7 | 771 | 1144 | 510 | 875 | 4.69e-32 | 135 |
MS.gene22345.t1 | MTR_2g025810 | 25.895 | 363 | 243 | 8 | 781 | 1135 | 456 | 800 | 7.99e-32 | 134 |
MS.gene22345.t1 | MTR_2g025790 | 25.575 | 391 | 257 | 10 | 759 | 1135 | 441 | 811 | 3.17e-31 | 132 |
MS.gene22345.t1 | MTR_2g025950 | 27.215 | 316 | 211 | 5 | 827 | 1135 | 459 | 762 | 5.89e-31 | 131 |
MS.gene22345.t1 | MTR_1g066940 | 26.681 | 461 | 263 | 12 | 743 | 1148 | 1109 | 1549 | 2.15e-26 | 118 |
MS.gene22345.t1 | MTR_1g066940 | 25.858 | 437 | 250 | 11 | 743 | 1125 | 1109 | 1525 | 2.25e-22 | 105 |
MS.gene22345.t1 | MTR_4g073370 | 27.726 | 321 | 192 | 7 | 861 | 1148 | 1568 | 1881 | 2.97e-18 | 91.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22345.t1 | AT3G53090 | 58.520 | 1162 | 448 | 8 | 1 | 1148 | 1 | 1142 | 0.0 | 1375 |
MS.gene22345.t1 | AT3G53090 | 58.520 | 1162 | 448 | 8 | 1 | 1148 | 1 | 1142 | 0.0 | 1375 |
MS.gene22345.t1 | AT3G17205 | 35.829 | 561 | 297 | 8 | 616 | 1148 | 490 | 1015 | 7.57e-106 | 357 |
MS.gene22345.t1 | AT3G17205 | 35.829 | 561 | 297 | 8 | 616 | 1148 | 504 | 1029 | 8.70e-106 | 357 |
MS.gene22345.t1 | AT3G17205 | 35.829 | 561 | 297 | 8 | 616 | 1148 | 504 | 1029 | 8.70e-106 | 357 |
MS.gene22345.t1 | AT1G70320 | 34.353 | 425 | 232 | 14 | 737 | 1145 | 3262 | 3655 | 4.38e-54 | 208 |
MS.gene22345.t1 | AT1G55860 | 33.882 | 425 | 234 | 14 | 737 | 1145 | 3285 | 3678 | 2.35e-52 | 202 |
MS.gene22345.t1 | AT4G12570 | 27.922 | 308 | 201 | 4 | 827 | 1125 | 553 | 848 | 8.67e-28 | 122 |
MS.gene22345.t1 | AT4G38600 | 28.013 | 307 | 185 | 7 | 871 | 1148 | 1589 | 1888 | 9.52e-20 | 96.7 |
MS.gene22345.t1 | AT4G38600 | 28.013 | 307 | 185 | 7 | 871 | 1148 | 1589 | 1888 | 9.52e-20 | 96.7 |
MS.gene22345.t1 | AT5G02880 | 25.750 | 400 | 244 | 11 | 786 | 1148 | 1119 | 1502 | 2.75e-19 | 95.1 |
MS.gene22345.t1 | AT4G38600 | 28.013 | 307 | 182 | 8 | 871 | 1148 | 1498 | 1794 | 3.60e-18 | 91.3 |
Find 235 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCCAATGCAGTAATATATT+TGG | 0.190829 | 7.3:-10820135 | None:intergenic |
TTCTGCTGCTCTCTTCATTC+AGG | 0.214578 | 7.3:+10818716 | MS.gene22345:CDS |
TTGCGGATGCATTTGGAATT+AGG | 0.230785 | 7.3:-10823804 | None:intergenic |
CACAAATCAGGAGGACAAAA+TGG | 0.239895 | 7.3:-10822417 | None:intergenic |
AACTGTTTACAGGTGATTAA+AGG | 0.254464 | 7.3:+10826941 | MS.gene22345:intron |
TCTAAGTTTGTCAGATAAAA+TGG | 0.257595 | 7.3:-10820242 | None:intergenic |
GCCGGACAATCAAAATCTTT+TGG | 0.258101 | 7.3:+10825497 | MS.gene22345:CDS |
TCAAGAATGCAGTTACTTTC+AGG | 0.261047 | 7.3:+10825403 | MS.gene22345:intron |
TTGCATGCGATGTCCCTCTT+TGG | 0.264499 | 7.3:+10828073 | MS.gene22345:CDS |
CTTAATGTTGAAAGAGAGTA+TGG | 0.275180 | 7.3:+10819355 | MS.gene22345:intron |
TGTTCTCGTGGTCCATTACT+TGG | 0.276681 | 7.3:+10827010 | MS.gene22345:CDS |
ACTCCAAATTCTTCTATATT+CGG | 0.287935 | 7.3:-10819871 | None:intergenic |
GAGTATAGTGAATGCAATTC+AGG | 0.290036 | 7.3:+10819939 | MS.gene22345:CDS |
CAACCGAATATAGAAGAATT+TGG | 0.292049 | 7.3:+10819868 | MS.gene22345:CDS |
ATGTTAATGGTCATCATAAT+AGG | 0.301230 | 7.3:+10822334 | MS.gene22345:CDS |
GATAATCACACAAGTGAAAA+TGG | 0.303038 | 7.3:+10821840 | MS.gene22345:CDS |
AGCGTACTTCATAAATTTAC+AGG | 0.304154 | 7.3:+10821927 | MS.gene22345:CDS |
GGCCTATTCTCACCTGCTTT+TGG | 0.304609 | 7.3:+10822112 | MS.gene22345:CDS |
ATTTAGATCTTTCAGATGTA+TGG | 0.307807 | 7.3:+10822015 | MS.gene22345:CDS |
TTGGAGAGCCTGAACTCTTC+TGG | 0.312829 | 7.3:+10819588 | MS.gene22345:CDS |
CCGGGGTGATGACGGCAAAT+TGG | 0.321818 | 7.3:+10819451 | MS.gene22345:CDS |
AGAAGCATACAACGCTCTTT+TGG | 0.337506 | 7.3:-10826971 | None:intergenic |
CTCAATACCCTAGTATATAA+TGG | 0.349634 | 7.3:+10822303 | MS.gene22345:CDS |
GTTCTTTAGTAGTACCTTAA+GGG | 0.352111 | 7.3:-10828154 | None:intergenic |
GTCCCTCTTTGGGCGACAAT+TGG | 0.352445 | 7.3:+10828084 | MS.gene22345:CDS |
TGGCCTTACGGAGGCTGGTC+TGG | 0.358087 | 7.3:+10823579 | MS.gene22345:CDS |
GAATAGAGATGCCACTAAAA+AGG | 0.359367 | 7.3:+10821599 | MS.gene22345:CDS |
TAGAACTCATGAAATTTATT+CGG | 0.360447 | 7.3:+10822485 | MS.gene22345:CDS |
GGATAAAGCTTCACGCAAAA+TGG | 0.361218 | 7.3:+10823414 | MS.gene22345:CDS |
CCTTGTGGGCCATGCCTCAT+AGG | 0.364074 | 7.3:-10822047 | None:intergenic |
AACTTTATATGTCTAGCAAC+AGG | 0.365146 | 7.3:+10821327 | MS.gene22345:CDS |
CAATGCTAGCGAGTTTAATC+AGG | 0.366542 | 7.3:+10825126 | MS.gene22345:CDS |
AGAAATTCTTGTCTCTTTCA+AGG | 0.369439 | 7.3:+10821275 | MS.gene22345:CDS |
TGCATGCGATGTCCCTCTTT+GGG | 0.369720 | 7.3:+10828074 | MS.gene22345:CDS |
TGTCATACATGGATCAATTT+AGG | 0.371550 | 7.3:+10821532 | MS.gene22345:CDS |
ACGGAGGCTGGTCTGGACTA+TGG | 0.375116 | 7.3:+10823586 | MS.gene22345:CDS |
TTTAACGGAGATGTCGGATT+TGG | 0.375417 | 7.3:+10821245 | MS.gene22345:CDS |
TTGAACTTTCAGTATCAGTT+TGG | 0.375534 | 7.3:-10821491 | None:intergenic |
CATACCTTGTGGATGGTAAA+TGG | 0.375807 | 7.3:-10827052 | None:intergenic |
GTAATGTTAACTGATCTAAA+AGG | 0.377030 | 7.3:+10820008 | MS.gene22345:CDS |
GCACAGCGACTTTCTTCTCT+TGG | 0.385657 | 7.3:+10819900 | MS.gene22345:CDS |
TCTGATAGTGATTTGAGAAA+TGG | 0.385958 | 7.3:-10819515 | None:intergenic |
ACTGTTACTGAAGAATCATT+TGG | 0.387330 | 7.3:+10824827 | MS.gene22345:CDS |
CACTTGATCCAGAGCTATAC+AGG | 0.390708 | 7.3:+10823977 | MS.gene22345:CDS |
GGGACAAGCCATTATATACT+AGG | 0.392459 | 7.3:-10822311 | None:intergenic |
AATGGCTTGTCCCATGTTAA+TGG | 0.393956 | 7.3:+10822321 | MS.gene22345:CDS |
AAGTACGCTGACCCACTTAC+TGG | 0.398706 | 7.3:-10821913 | None:intergenic |
AGTAGTTACCTCTCTTCAAA+TGG | 0.401476 | 7.3:-10822582 | None:intergenic |
CTGGATTTCTCGTGAGATTG+TGG | 0.403174 | 7.3:+10821772 | MS.gene22345:CDS |
GATTTGCTTTACAATCTTGT+TGG | 0.404001 | 7.3:+10819569 | MS.gene22345:CDS |
CTGGGTGATAGCTTTCGTTT+TGG | 0.404427 | 7.3:-10820168 | None:intergenic |
TGGATTTCTCGTGAGATTGT+GGG | 0.407298 | 7.3:+10821773 | MS.gene22345:CDS |
CTGAAGAATCATTTGGCAAA+AGG | 0.407837 | 7.3:+10824834 | MS.gene22345:CDS |
CGTTGCTGCTCTAACTTGAA+TGG | 0.409171 | 7.3:-10822264 | None:intergenic |
CGGGGTCATATTGTTGAAGA+TGG | 0.423761 | 7.3:+10823487 | MS.gene22345:CDS |
CTCTGCAGCTTCAGCAGGAG+TGG | 0.425427 | 7.3:+10819406 | MS.gene22345:CDS |
CATTGAGATTGTAGTACGTC+GGG | 0.425547 | 7.3:+10823468 | MS.gene22345:CDS |
CTTCAGATGATTGAGTTCCT+TGG | 0.426636 | 7.3:+10823844 | MS.gene22345:CDS |
TATATCTAATGACTATTCCT+TGG | 0.428488 | 7.3:+10820318 | MS.gene22345:CDS |
GGAATATACCAGAAGAGTTC+AGG | 0.428710 | 7.3:-10819596 | None:intergenic |
GTTCTAGCAGCAACTGCAAC+TGG | 0.429510 | 7.3:-10822468 | None:intergenic |
AACTTGCTACAATACCCTTA+AGG | 0.432752 | 7.3:+10828140 | MS.gene22345:CDS |
GAGTTCCTTGGAAGAGTAGT+TGG | 0.440856 | 7.3:+10823856 | MS.gene22345:CDS |
GTTGGTAAAGCTCTTTATGA+AGG | 0.444314 | 7.3:+10823874 | MS.gene22345:CDS |
GTAAAGATGGGGCCAGTAAG+TGG | 0.446385 | 7.3:+10821901 | MS.gene22345:CDS |
GAACTCAACTAAACCTTTCA+CGG | 0.448125 | 7.3:-10820075 | None:intergenic |
TAATGGACCACGAGAACAAC+TGG | 0.449832 | 7.3:-10827005 | None:intergenic |
TTTATCTGACAAACTTAGAT+GGG | 0.450283 | 7.3:+10820246 | MS.gene22345:CDS |
AATGATAGCATGTTAAGAAC+TGG | 0.451530 | 7.3:-10821744 | None:intergenic |
GCAGGAGAAAGCCACAAATC+AGG | 0.451926 | 7.3:-10822429 | None:intergenic |
GATTTACCTTCACATACATA+AGG | 0.453949 | 7.3:-10824002 | None:intergenic |
CCTCTTTGGGCGACAATTGG+AGG | 0.460837 | 7.3:+10828087 | MS.gene22345:CDS |
ATGACATTATTAACGACTCA+TGG | 0.464243 | 7.3:-10821515 | None:intergenic |
ATCTCAATGGCTCGTGAACC+AGG | 0.465594 | 7.3:-10823454 | None:intergenic |
GGTTGCTCTGCAGCTTCAGC+AGG | 0.469167 | 7.3:+10819401 | MS.gene22345:CDS |
TTCGACAATTAAATTCGCTT+GGG | 0.470304 | 7.3:+10823512 | MS.gene22345:CDS |
TGCCAAATATATTACTGCAT+TGG | 0.471162 | 7.3:+10820133 | MS.gene22345:CDS |
TGATTGACATTCAGCATGTC+AGG | 0.472502 | 7.3:-10820275 | None:intergenic |
TTTAGATCTTTCAGATGTAT+GGG | 0.474644 | 7.3:+10822016 | MS.gene22345:CDS |
ATTCACTGATGACAAAAGAT+TGG | 0.475071 | 7.3:-10821580 | None:intergenic |
AACATGCTATCATTTACTCC+TGG | 0.476548 | 7.3:+10821753 | MS.gene22345:CDS |
GAGAAGAAAGTCGCTGTGCC+TGG | 0.479684 | 7.3:-10819896 | None:intergenic |
TTTCGACAATTAAATTCGCT+TGG | 0.480501 | 7.3:+10823511 | MS.gene22345:CDS |
TTCAAGGCTATTCCACCAGT+TGG | 0.482014 | 7.3:+10821291 | MS.gene22345:CDS |
CTGATAGTGATTTGAGAAAT+GGG | 0.483024 | 7.3:-10819514 | None:intergenic |
AAAGGTTTAGTTGAGTTCAC+AGG | 0.485967 | 7.3:+10820080 | MS.gene22345:CDS |
AGGCTATTCCACCAGTTGGT+TGG | 0.486113 | 7.3:+10821295 | MS.gene22345:CDS |
ATAAGGCTCCTGTATAGCTC+TGG | 0.488201 | 7.3:-10823985 | None:intergenic |
CACAATCTCACGAGAAATCC+AGG | 0.488580 | 7.3:-10821771 | None:intergenic |
TACTTCGATCTCAAACAGTC+TGG | 0.488854 | 7.3:+10821626 | MS.gene22345:CDS |
TGGGTGACAAAGAACAGAAA+TGG | 0.489733 | 7.3:-10819495 | None:intergenic |
CTTGTCTTGATAATATTGAA+TGG | 0.490541 | 7.3:+10821448 | MS.gene22345:CDS |
CTTACAATTAATGTATGAAA+GGG | 0.491261 | 7.3:+10822383 | MS.gene22345:CDS |
AGCTTTGCTCTCAAAGTGCC+TGG | 0.492135 | 7.3:-10828561 | None:intergenic |
GAGAGTATGGAGGCGCTTCA+AGG | 0.494130 | 7.3:+10819368 | MS.gene22345:intron |
GTTTCGTGAATTCATCAAGA+TGG | 0.495419 | 7.3:+10823393 | MS.gene22345:CDS |
CACTCTAGCAGAAAGCCTAC+TGG | 0.496927 | 7.3:+10821425 | MS.gene22345:CDS |
GAAAATAACTCTGTAGACTC+TGG | 0.498822 | 7.3:+10821354 | MS.gene22345:CDS |
AAATCAAGAAAGTTCAAATC+CGG | 0.499957 | 7.3:-10828607 | None:intergenic |
ATGATGAATCATCAGATCTC+AGG | 0.500193 | 7.3:-10822512 | None:intergenic |
TGTCAGTGAATGTGGCCTTA+CGG | 0.500904 | 7.3:+10823567 | MS.gene22345:CDS |
AGACTACAAACTCAACCAAC+AGG | 0.504373 | 7.3:+10824937 | MS.gene22345:CDS |
GCGCTTCAAGGTTACAAAGA+TGG | 0.505805 | 7.3:+10819380 | MS.gene22345:CDS |
TTCGCGAGAGACCAACCAAC+TGG | 0.505914 | 7.3:-10821306 | None:intergenic |
GGTGCAGAGTGACTGCCAAT+TGG | 0.506632 | 7.3:-10821981 | None:intergenic |
CATGTGGTTGAGCTCAAGTC+TGG | 0.507203 | 7.3:+10824857 | MS.gene22345:CDS |
TAGGAGGCTGTCTGAAGTTG+AGG | 0.507555 | 7.3:-10823785 | None:intergenic |
TCATCATCTTCCCTGAGTCT+AGG | 0.510653 | 7.3:+10822528 | MS.gene22345:CDS |
ATAGATTTGTGCTTTAAAGC+AGG | 0.512627 | 7.3:-10820371 | None:intergenic |
AGATGCCATTGCTGACAGAC+AGG | 0.514022 | 7.3:-10821555 | None:intergenic |
GTAGTTACCTCTCTTCAAAT+GGG | 0.514857 | 7.3:-10822581 | None:intergenic |
TATGCTATCAGTTCAAATGC+CGG | 0.516355 | 7.3:+10828588 | MS.gene22345:CDS |
ACATCGGTGAACAGTTATAC+CGG | 0.517390 | 7.3:+10819432 | MS.gene22345:CDS |
CTCTGGAGACAAACATATGT+CGG | 0.518715 | 7.3:+10821818 | MS.gene22345:CDS |
GAGGTTACAGTGAGGGGAGC+CGG | 0.520738 | 7.3:+10825479 | MS.gene22345:CDS |
GAATGTGGCCTTACGGAGGC+TGG | 0.522480 | 7.3:+10823574 | MS.gene22345:CDS |
CAGTTATACCGGGGTGATGA+CGG | 0.523229 | 7.3:+10819443 | MS.gene22345:CDS |
AACCAAAAGCAGGTGAGAAT+AGG | 0.523489 | 7.3:-10822114 | None:intergenic |
ACAAATCAGGAGGACAAAAT+GGG | 0.523633 | 7.3:-10822416 | None:intergenic |
AGATCTAAATTGACTCTGCT+TGG | 0.525378 | 7.3:-10822002 | None:intergenic |
GCTTACAATTAATGTATGAA+AGG | 0.526119 | 7.3:+10822382 | MS.gene22345:CDS |
CTGATCTTATCTCTCCGTCC+TGG | 0.528038 | 7.3:+10825092 | MS.gene22345:CDS |
AAAGCTTCACGCAAAATGGC+TGG | 0.528685 | 7.3:+10823418 | MS.gene22345:CDS |
TCATTCATGCAGAACTATGA+TGG | 0.532632 | 7.3:+10824776 | MS.gene22345:intron |
CAGCAACTGCAACTGGTGGC+CGG | 0.536160 | 7.3:-10822461 | None:intergenic |
CCTATGAGGCATGGCCCACA+AGG | 0.537527 | 7.3:+10822047 | MS.gene22345:CDS |
ACAGACCGCACAGATCCAAT+TGG | 0.538409 | 7.3:+10821966 | MS.gene22345:CDS |
GTGTTTACGATGTGCATCCA+TGG | 0.539518 | 7.3:-10818489 | None:intergenic |
AAAAGTAACACGCGATACAC+TGG | 0.540043 | 7.3:+10825457 | MS.gene22345:CDS |
AGTATAGTGAATGCAATTCA+GGG | 0.540454 | 7.3:+10819940 | MS.gene22345:CDS |
TACAGCTTCCCACATACAAA+CGG | 0.541277 | 7.3:+10828538 | MS.gene22345:intron |
TGGGAAAACATGGGGAGTCA+TGG | 0.541754 | 7.3:-10822562 | None:intergenic |
CGGATGCATTTGGAATTAGG+AGG | 0.541906 | 7.3:-10823801 | None:intergenic |
AGTGCCTGGCCGTTTGTATG+TGG | 0.542565 | 7.3:-10828547 | None:intergenic |
GATGCAGATTTAGCCGTGAA+AGG | 0.544292 | 7.3:+10820062 | MS.gene22345:CDS |
GTTCTCGTGGTCCATTACTT+GGG | 0.545099 | 7.3:+10827011 | MS.gene22345:CDS |
GACTCTGGATCCTTCAGTCA+AGG | 0.546796 | 7.3:+10821369 | MS.gene22345:CDS |
TTGTAGCAAGTTGAAGCTGA+TGG | 0.548257 | 7.3:-10828129 | None:intergenic |
GTTGAGAGGAGCGAGTGCGA+AGG | 0.550427 | 7.3:+10818620 | MS.gene22345:CDS |
TCATCATAATAGGCCCCTCA+TGG | 0.553272 | 7.3:+10822344 | MS.gene22345:CDS |
TCTCTTCAAATGGGAAAACA+TGG | 0.553838 | 7.3:-10822572 | None:intergenic |
ACTGGTAATGATCCACGTAC+TGG | 0.554528 | 7.3:-10821726 | None:intergenic |
GTCGTTAATAATGTCATACA+TGG | 0.555560 | 7.3:+10821521 | MS.gene22345:CDS |
TAGAAGAATTTGGAGTTACC+AGG | 0.555693 | 7.3:+10819878 | MS.gene22345:CDS |
GCTGGTGAAATTTCTGAACC+TGG | 0.558191 | 7.3:+10823436 | MS.gene22345:CDS |
TGTTAACTGATCTAAAAGGA+TGG | 0.559734 | 7.3:+10820012 | MS.gene22345:CDS |
CCGACGTACTACAATCTCAA+TGG | 0.559916 | 7.3:-10823467 | None:intergenic |
CTCCAATTGTCGCCCAAAGA+GGG | 0.560123 | 7.3:-10828086 | None:intergenic |
TCCTTCAGTCAAGGTTTAGA+CGG | 0.561797 | 7.3:+10821378 | MS.gene22345:CDS |
CTCTTCAAATGGGAAAACAT+GGG | 0.562504 | 7.3:-10822571 | None:intergenic |
AAGTATTTGAACCCAAGTAA+TGG | 0.563712 | 7.3:-10827022 | None:intergenic |
TATTATGATGACCATTAACA+TGG | 0.564426 | 7.3:-10822332 | None:intergenic |
TGACATTATTAACGACTCAT+GGG | 0.568612 | 7.3:-10821514 | None:intergenic |
CATCGGTGAACAGTTATACC+GGG | 0.569550 | 7.3:+10819433 | MS.gene22345:CDS |
TTTGTCACCAGTTGTTCTCG+TGG | 0.574734 | 7.3:+10826998 | MS.gene22345:CDS |
TCTGCAGCTTCAGCAGGAGT+GGG | 0.576891 | 7.3:+10819407 | MS.gene22345:CDS |
CTTTACCAACTACTCTTCCA+AGG | 0.577236 | 7.3:-10823861 | None:intergenic |
CCAAGATCATACCTTGTGGA+TGG | 0.577657 | 7.3:-10827059 | None:intergenic |
GGATTTCAAATAATTTGTTG+AGG | 0.578553 | 7.3:+10819472 | MS.gene22345:CDS |
CCTCCAATTGTCGCCCAAAG+AGG | 0.580527 | 7.3:-10828087 | None:intergenic |
AGTCCAGACCAGCCTCCGTA+AGG | 0.581216 | 7.3:-10823582 | None:intergenic |
TCGAGATGATCTTCTTCAGA+AGG | 0.581699 | 7.3:+10818650 | MS.gene22345:CDS |
CTTCCCACATACAAACGGCC+AGG | 0.581720 | 7.3:+10828543 | MS.gene22345:CDS |
GTATCATTTGTCAGTGAATG+TGG | 0.581799 | 7.3:+10823559 | MS.gene22345:CDS |
ACTGTTTGAGATCGAAGTAT+CGG | 0.583328 | 7.3:-10821622 | None:intergenic |
ACTGATCTAAAAGGATGGAA+AGG | 0.584473 | 7.3:+10820017 | MS.gene22345:CDS |
TTATAACAGAGCCTAGACTC+AGG | 0.586753 | 7.3:-10822539 | None:intergenic |
TGTCATCAAGAACCAAAAGC+AGG | 0.586888 | 7.3:-10822124 | None:intergenic |
TTGATTCAGGTATCGTTGAG+AGG | 0.587715 | 7.3:+10818606 | MS.gene22345:intron |
GGACAAGCCATTATATACTA+GGG | 0.588422 | 7.3:-10822310 | None:intergenic |
GAGATTGTGGGGTGAACTTG+AGG | 0.588635 | 7.3:+10821785 | MS.gene22345:CDS |
ATTCACTGACAAATGATACA+TGG | 0.589415 | 7.3:-10823555 | None:intergenic |
TTAGGCCTGTCTGTCAGCAA+TGG | 0.593042 | 7.3:+10821550 | MS.gene22345:CDS |
ATCATTTGGCAAAAGGCATG+TGG | 0.593574 | 7.3:+10824841 | MS.gene22345:CDS |
TGATCCACGTACTGGACTCA+AGG | 0.593851 | 7.3:-10821718 | None:intergenic |
TTGAATAATTTCAACCAGGA+CGG | 0.595516 | 7.3:-10825106 | None:intergenic |
TAAAGATGGGGCCAGTAAGT+GGG | 0.596487 | 7.3:+10821902 | MS.gene22345:CDS |
TACACTGGAGGTTACAGTGA+GGG | 0.598060 | 7.3:+10825472 | MS.gene22345:CDS |
CTGCTAGAGTGACAATAACA+TGG | 0.601136 | 7.3:-10821413 | None:intergenic |
TTATCTGACAAACTTAGATG+GGG | 0.604181 | 7.3:+10820247 | MS.gene22345:CDS |
TATGGGACATAGAACCTATG+AGG | 0.604881 | 7.3:+10822033 | MS.gene22345:CDS |
TTGTTCAAAAGCTATTGGGA+CGG | 0.605651 | 7.3:+10823929 | MS.gene22345:CDS |
CAGGAGCCTTATGTATGTGA+AGG | 0.607275 | 7.3:+10823996 | MS.gene22345:CDS |
AGAATGCAGTTACTTTCAGG+TGG | 0.609514 | 7.3:+10825406 | MS.gene22345:intron |
ACCGTCTAAACCTTGACTGA+AGG | 0.610362 | 7.3:-10821379 | None:intergenic |
TTTCTCAAATCACTATCAGA+AGG | 0.613385 | 7.3:+10819518 | MS.gene22345:CDS |
AAGGTTTAGTTGAGTTCACA+GGG | 0.617416 | 7.3:+10820081 | MS.gene22345:CDS |
GACATAGAACCTATGAGGCA+TGG | 0.618981 | 7.3:+10822038 | MS.gene22345:CDS |
TCAGCAGGAGTGGGAGACAT+CGG | 0.622033 | 7.3:+10819416 | MS.gene22345:CDS |
TTCACAGGGAGTAATAAAAG+TGG | 0.623278 | 7.3:+10820095 | MS.gene22345:CDS |
ACTGACAAATGATACATGGA+TGG | 0.625642 | 7.3:-10823551 | None:intergenic |
AAAGCAGGTAGAAGAACATG+TGG | 0.628339 | 7.3:-10820356 | None:intergenic |
CATTAATTGTAAGCATCTGA+CGG | 0.629899 | 7.3:-10822373 | None:intergenic |
CCATTGAGATTGTAGTACGT+CGG | 0.629993 | 7.3:+10823467 | MS.gene22345:CDS |
GCGAGAGACCAACCAACTGG+TGG | 0.633643 | 7.3:-10821303 | None:intergenic |
GGATTTCTCGTGAGATTGTG+GGG | 0.634990 | 7.3:+10821774 | MS.gene22345:CDS |
TCTTCAAATGGGAAAACATG+GGG | 0.636883 | 7.3:-10822570 | None:intergenic |
CCAATTTGCCGTCATCACCC+CGG | 0.639075 | 7.3:-10819451 | None:intergenic |
ATCTGACGGCACAATCCATG+AGG | 0.640617 | 7.3:-10822359 | None:intergenic |
GTGCCTGGCCGTTTGTATGT+GGG | 0.641728 | 7.3:-10828546 | None:intergenic |
ACACTGGAGGTTACAGTGAG+GGG | 0.643439 | 7.3:+10825473 | MS.gene22345:CDS |
TATAACAGAGCCTAGACTCA+GGG | 0.644091 | 7.3:-10822538 | None:intergenic |
GAACTATGATGGTGATGTCA+AGG | 0.644549 | 7.3:+10824787 | MS.gene22345:intron |
TCTGACGGCACAATCCATGA+GGG | 0.645631 | 7.3:-10822358 | None:intergenic |
TTCTTTGTTTAGATTCAGAG+CGG | 0.647615 | 7.3:+10819820 | MS.gene22345:intron |
GGAGAAAGCCACAAATCAGG+AGG | 0.650338 | 7.3:-10822426 | None:intergenic |
TCAGCCTTGAGTCCAGTACG+TGG | 0.652098 | 7.3:+10821714 | MS.gene22345:CDS |
GAGGCTGGTCTGGACTATGG+TGG | 0.652496 | 7.3:+10823589 | MS.gene22345:CDS |
GGATGCACATCGTAAACACC+AGG | 0.653632 | 7.3:+10818493 | MS.gene22345:CDS |
GGGACATGTTGCACAAACCA+AGG | 0.654107 | 7.3:-10820335 | None:intergenic |
CTAGCAGCAACTGCAACTGG+TGG | 0.656060 | 7.3:-10822465 | None:intergenic |
ACTTTATATGTCTAGCAACA+GGG | 0.660742 | 7.3:+10821328 | MS.gene22345:CDS |
TATTATCAAGACAAGCCAGT+AGG | 0.662398 | 7.3:-10821440 | None:intergenic |
GTGGTTGAGCTCAAGTCTGG+TGG | 0.664894 | 7.3:+10824860 | MS.gene22345:CDS |
CAAAACGAAAGCTATCACCC+AGG | 0.664916 | 7.3:+10820169 | MS.gene22345:CDS |
ATTATGATGACCATTAACAT+GGG | 0.665086 | 7.3:-10822331 | None:intergenic |
AGCATTGAATAATTTCAACC+AGG | 0.665959 | 7.3:-10825110 | None:intergenic |
TGAATCATCAGATCTCAGGT+TGG | 0.672269 | 7.3:-10822508 | None:intergenic |
GTGCAATAACTTTAGCTGTG+CGG | 0.677849 | 7.3:+10820219 | MS.gene22345:CDS |
GATGCAGTACATACATGCGA+TGG | 0.682992 | 7.3:+10824913 | MS.gene22345:CDS |
TGTTTACGATGTGCATCCAT+GGG | 0.685275 | 7.3:-10818488 | None:intergenic |
GTATAGTGAATGCAATTCAG+GGG | 0.687591 | 7.3:+10819941 | MS.gene22345:CDS |
CTGACGGCACAATCCATGAG+GGG | 0.689338 | 7.3:-10822357 | None:intergenic |
GACTGCCAATTGGATCTGTG+CGG | 0.694175 | 7.3:-10821971 | None:intergenic |
CGGCTAAATCTGCATCTAAG+CGG | 0.695268 | 7.3:-10820055 | None:intergenic |
TTGGAGGACAAGATGTAGAG+CGG | 0.695288 | 7.3:+10828103 | MS.gene22345:CDS |
AAGCAGGTAGAAGAACATGT+GGG | 0.703676 | 7.3:-10820355 | None:intergenic |
AGTAACACGCGATACACTGG+AGG | 0.706083 | 7.3:+10825460 | MS.gene22345:CDS |
CAGTGAATGTGGCCTTACGG+AGG | 0.706179 | 7.3:+10823570 | MS.gene22345:CDS |
ATTGAGATTGTAGTACGTCG+GGG | 0.710397 | 7.3:+10823469 | MS.gene22345:CDS |
GCCACCATTTACCATCCACA+AGG | 0.717521 | 7.3:+10827048 | MS.gene22345:CDS |
ATCGGTGAACAGTTATACCG+GGG | 0.727045 | 7.3:+10819434 | MS.gene22345:CDS |
AATGTTGAAAGAGAGTATGG+AGG | 0.728338 | 7.3:+10819358 | MS.gene22345:intron |
ACCTTGTGGATGGTAAATGG+TGG | 0.753265 | 7.3:-10827049 | None:intergenic |
ATACACTGGAGGTTACAGTG+AGG | 0.787154 | 7.3:+10825471 | MS.gene22345:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 10818491 | 10828626 | 10818491 | ID=MS.gene22345 |
chr7.3 | mRNA | 10818491 | 10828626 | 10818491 | ID=MS.gene22345.t1;Parent=MS.gene22345 |
chr7.3 | exon | 10818491 | 10818514 | 10818491 | ID=MS.gene22345.t1.exon1;Parent=MS.gene22345.t1 |
chr7.3 | CDS | 10818491 | 10818514 | 10818491 | ID=cds.MS.gene22345.t1;Parent=MS.gene22345.t1 |
chr7.3 | exon | 10818615 | 10818737 | 10818615 | ID=MS.gene22345.t1.exon2;Parent=MS.gene22345.t1 |
chr7.3 | CDS | 10818615 | 10818737 | 10818615 | ID=cds.MS.gene22345.t1;Parent=MS.gene22345.t1 |
chr7.3 | exon | 10819369 | 10819609 | 10819369 | ID=MS.gene22345.t1.exon3;Parent=MS.gene22345.t1 |
chr7.3 | CDS | 10819369 | 10819609 | 10819369 | ID=cds.MS.gene22345.t1;Parent=MS.gene22345.t1 |
chr7.3 | exon | 10819832 | 10820421 | 10819832 | ID=MS.gene22345.t1.exon4;Parent=MS.gene22345.t1 |
chr7.3 | CDS | 10819832 | 10820421 | 10819832 | ID=cds.MS.gene22345.t1;Parent=MS.gene22345.t1 |
chr7.3 | exon | 10821228 | 10822166 | 10821228 | ID=MS.gene22345.t1.exon5;Parent=MS.gene22345.t1 |
chr7.3 | CDS | 10821228 | 10822166 | 10821228 | ID=cds.MS.gene22345.t1;Parent=MS.gene22345.t1 |
chr7.3 | exon | 10822261 | 10822595 | 10822261 | ID=MS.gene22345.t1.exon6;Parent=MS.gene22345.t1 |
chr7.3 | CDS | 10822261 | 10822595 | 10822261 | ID=cds.MS.gene22345.t1;Parent=MS.gene22345.t1 |
chr7.3 | exon | 10823384 | 10823662 | 10823384 | ID=MS.gene22345.t1.exon7;Parent=MS.gene22345.t1 |
chr7.3 | CDS | 10823384 | 10823662 | 10823384 | ID=cds.MS.gene22345.t1;Parent=MS.gene22345.t1 |
chr7.3 | exon | 10823765 | 10824017 | 10823765 | ID=MS.gene22345.t1.exon8;Parent=MS.gene22345.t1 |
chr7.3 | CDS | 10823765 | 10824017 | 10823765 | ID=cds.MS.gene22345.t1;Parent=MS.gene22345.t1 |
chr7.3 | exon | 10824788 | 10824958 | 10824788 | ID=MS.gene22345.t1.exon9;Parent=MS.gene22345.t1 |
chr7.3 | CDS | 10824788 | 10824958 | 10824788 | ID=cds.MS.gene22345.t1;Parent=MS.gene22345.t1 |
chr7.3 | exon | 10825055 | 10825147 | 10825055 | ID=MS.gene22345.t1.exon10;Parent=MS.gene22345.t1 |
chr7.3 | CDS | 10825055 | 10825147 | 10825055 | ID=cds.MS.gene22345.t1;Parent=MS.gene22345.t1 |
chr7.3 | exon | 10825415 | 10825522 | 10825415 | ID=MS.gene22345.t1.exon11;Parent=MS.gene22345.t1 |
chr7.3 | CDS | 10825415 | 10825522 | 10825415 | ID=cds.MS.gene22345.t1;Parent=MS.gene22345.t1 |
chr7.3 | exon | 10826953 | 10827069 | 10826953 | ID=MS.gene22345.t1.exon12;Parent=MS.gene22345.t1 |
chr7.3 | CDS | 10826953 | 10827069 | 10826953 | ID=cds.MS.gene22345.t1;Parent=MS.gene22345.t1 |
chr7.3 | exon | 10828072 | 10828161 | 10828072 | ID=MS.gene22345.t1.exon13;Parent=MS.gene22345.t1 |
chr7.3 | CDS | 10828072 | 10828161 | 10828072 | ID=cds.MS.gene22345.t1;Parent=MS.gene22345.t1 |
chr7.3 | exon | 10828543 | 10828626 | 10828543 | ID=MS.gene22345.t1.exon14;Parent=MS.gene22345.t1 |
chr7.3 | CDS | 10828543 | 10828626 | 10828543 | ID=cds.MS.gene22345.t1;Parent=MS.gene22345.t1 |
Gene Sequence |
Protein sequence |