Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22395.t1 | XP_003625695.1 | 98.3 | 293 | 5 | 0 | 1 | 293 | 1 | 293 | 2.90E-177 | 630.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22395.t1 | Q9SJL9 | 81.7 | 290 | 53 | 0 | 3 | 292 | 9 | 298 | 1.7e-149 | 530.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22395.t1 | G7L3X4 | 98.3 | 293 | 5 | 0 | 1 | 293 | 1 | 293 | 2.1e-177 | 630.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene71577 | MS.gene22395 | PPI |
MS.gene22395 | MS.gene93417 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22395.t1 | MTR_7g102260 | 98.294 | 293 | 5 | 0 | 1 | 293 | 1 | 293 | 0.0 | 603 |
MS.gene22395.t1 | MTR_1g063020 | 83.505 | 291 | 48 | 0 | 3 | 293 | 6 | 296 | 0.0 | 525 |
MS.gene22395.t1 | MTR_4g057450 | 70.790 | 291 | 85 | 0 | 1 | 291 | 14 | 304 | 6.38e-158 | 442 |
MS.gene22395.t1 | MTR_2g095800 | 66.897 | 290 | 94 | 2 | 3 | 291 | 21 | 309 | 4.42e-143 | 405 |
MS.gene22395.t1 | MTR_1g033420 | 40.878 | 296 | 158 | 7 | 5 | 291 | 4 | 291 | 1.66e-66 | 211 |
MS.gene22395.t1 | MTR_8g064180 | 38.158 | 304 | 167 | 6 | 3 | 291 | 13 | 310 | 5.18e-66 | 209 |
MS.gene22395.t1 | MTR_7g093530 | 40.000 | 265 | 142 | 6 | 36 | 291 | 23 | 279 | 2.64e-60 | 193 |
MS.gene22395.t1 | MTR_3g084630 | 41.667 | 264 | 137 | 6 | 34 | 291 | 25 | 277 | 3.10e-60 | 193 |
MS.gene22395.t1 | MTR_1g105900 | 39.326 | 267 | 143 | 8 | 36 | 291 | 33 | 291 | 3.15e-60 | 194 |
MS.gene22395.t1 | MTR_3g084620 | 41.667 | 264 | 137 | 6 | 34 | 291 | 25 | 277 | 3.49e-60 | 193 |
MS.gene22395.t1 | MTR_5g029100 | 40.891 | 247 | 133 | 3 | 55 | 291 | 62 | 305 | 5.15e-60 | 195 |
MS.gene22395.t1 | MTR_4g128570 | 39.925 | 268 | 136 | 7 | 30 | 291 | 24 | 272 | 7.13e-60 | 192 |
MS.gene22395.t1 | MTR_8g081040 | 40.458 | 262 | 140 | 6 | 36 | 291 | 30 | 281 | 1.23e-59 | 192 |
MS.gene22395.t1 | MTR_4g128410 | 39.623 | 265 | 143 | 7 | 36 | 291 | 24 | 280 | 4.59e-59 | 190 |
MS.gene22395.t1 | MTR_4g128580 | 39.568 | 278 | 147 | 6 | 27 | 291 | 16 | 285 | 3.50e-58 | 188 |
MS.gene22395.t1 | MTR_3g089540 | 40.840 | 262 | 141 | 5 | 36 | 291 | 29 | 282 | 8.46e-58 | 187 |
MS.gene22395.t1 | MTR_4g128400 | 39.623 | 265 | 143 | 6 | 36 | 291 | 27 | 283 | 1.01e-57 | 187 |
MS.gene22395.t1 | MTR_4g126920 | 39.474 | 266 | 143 | 6 | 36 | 291 | 24 | 281 | 1.02e-57 | 187 |
MS.gene22395.t1 | MTR_7g084770 | 37.410 | 278 | 146 | 7 | 21 | 291 | 31 | 287 | 1.28e-57 | 187 |
MS.gene22395.t1 | MTR_6g088320 | 38.951 | 267 | 144 | 7 | 36 | 291 | 25 | 283 | 1.74e-57 | 186 |
MS.gene22395.t1 | MTR_7g084760 | 37.410 | 278 | 146 | 7 | 21 | 291 | 31 | 287 | 2.34e-57 | 186 |
MS.gene22395.t1 | MTR_2g038860 | 38.697 | 261 | 139 | 5 | 36 | 283 | 25 | 277 | 7.94e-57 | 185 |
MS.gene22395.t1 | MTR_2g038705 | 38.697 | 261 | 139 | 5 | 36 | 283 | 25 | 277 | 7.94e-57 | 185 |
MS.gene22395.t1 | MTR_5g091730 | 39.695 | 262 | 142 | 7 | 36 | 291 | 27 | 278 | 8.52e-57 | 184 |
MS.gene22395.t1 | MTR_5g029100 | 40.678 | 236 | 127 | 3 | 66 | 291 | 42 | 274 | 1.27e-56 | 185 |
MS.gene22395.t1 | MTR_7g084750 | 37.121 | 264 | 149 | 7 | 37 | 291 | 32 | 287 | 8.42e-56 | 182 |
MS.gene22395.t1 | MTR_8g102220 | 37.828 | 267 | 127 | 7 | 36 | 291 | 28 | 266 | 1.52e-55 | 181 |
MS.gene22395.t1 | MTR_2g089140 | 35.816 | 282 | 153 | 6 | 25 | 291 | 18 | 286 | 3.12e-55 | 181 |
MS.gene22395.t1 | MTR_8g090100 | 39.630 | 270 | 139 | 8 | 37 | 291 | 21 | 281 | 3.44e-55 | 181 |
MS.gene22395.t1 | MTR_4g045853 | 37.037 | 270 | 142 | 6 | 29 | 283 | 24 | 280 | 6.27e-55 | 180 |
MS.gene22395.t1 | MTR_6g033085 | 34.667 | 300 | 168 | 9 | 1 | 291 | 7 | 287 | 9.99e-55 | 179 |
MS.gene22395.t1 | MTR_8g102910 | 36.093 | 302 | 157 | 8 | 1 | 291 | 3 | 279 | 1.47e-54 | 179 |
MS.gene22395.t1 | MTR_6g033055 | 39.076 | 238 | 130 | 6 | 61 | 291 | 58 | 287 | 2.00e-53 | 176 |
MS.gene22395.t1 | MTR_1g105495 | 36.900 | 271 | 144 | 8 | 37 | 291 | 35 | 294 | 4.20e-53 | 175 |
MS.gene22395.t1 | MTR_7g056090 | 38.889 | 270 | 144 | 9 | 30 | 291 | 25 | 281 | 1.84e-51 | 171 |
MS.gene22395.t1 | MTR_4g097640 | 37.079 | 267 | 145 | 8 | 37 | 291 | 32 | 287 | 3.95e-50 | 167 |
MS.gene22395.t1 | MTR_4g097670 | 37.079 | 267 | 145 | 8 | 37 | 291 | 32 | 287 | 3.95e-50 | 167 |
MS.gene22395.t1 | MTR_4g097700 | 37.079 | 267 | 145 | 8 | 37 | 291 | 69 | 324 | 5.83e-50 | 168 |
MS.gene22395.t1 | MTR_8g013055 | 37.743 | 257 | 140 | 6 | 37 | 283 | 31 | 277 | 2.58e-49 | 165 |
MS.gene22395.t1 | MTR_4g128590 | 35.145 | 276 | 141 | 8 | 30 | 291 | 24 | 275 | 2.54e-48 | 162 |
MS.gene22395.t1 | MTR_2g089140 | 37.118 | 229 | 121 | 5 | 78 | 291 | 3 | 223 | 2.96e-48 | 160 |
MS.gene22395.t1 | MTR_2g049030 | 33.585 | 265 | 148 | 11 | 37 | 291 | 30 | 276 | 1.00e-39 | 140 |
MS.gene22395.t1 | MTR_2g049130 | 32.453 | 265 | 157 | 10 | 37 | 293 | 29 | 279 | 1.10e-39 | 140 |
MS.gene22395.t1 | MTR_8g032640 | 33.702 | 181 | 103 | 6 | 55 | 231 | 31 | 198 | 1.06e-17 | 80.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22395.t1 | AT2G36870 | 81.724 | 290 | 53 | 0 | 3 | 292 | 9 | 298 | 0.0 | 506 |
MS.gene22395.t1 | AT3G44990 | 64.261 | 291 | 104 | 0 | 1 | 291 | 3 | 293 | 1.84e-138 | 392 |
MS.gene22395.t1 | AT2G36870 | 84.118 | 170 | 27 | 0 | 3 | 172 | 9 | 178 | 1.11e-104 | 303 |
MS.gene22395.t1 | AT4G14130 | 41.137 | 299 | 140 | 8 | 5 | 291 | 10 | 284 | 5.27e-69 | 216 |
MS.gene22395.t1 | AT1G10550 | 35.179 | 307 | 176 | 6 | 2 | 291 | 9 | 309 | 3.00e-65 | 207 |
MS.gene22395.t1 | AT1G32170 | 39.933 | 298 | 152 | 7 | 6 | 291 | 11 | 293 | 1.36e-64 | 206 |
MS.gene22395.t1 | AT5G57550 | 38.328 | 287 | 155 | 6 | 2 | 283 | 4 | 273 | 2.70e-64 | 204 |
MS.gene22395.t1 | AT1G14720 | 39.405 | 269 | 152 | 4 | 31 | 291 | 25 | 290 | 3.43e-63 | 202 |
MS.gene22395.t1 | AT3G23730 | 40.590 | 271 | 140 | 7 | 34 | 291 | 24 | 286 | 1.28e-62 | 199 |
MS.gene22395.t1 | AT5G57560 | 40.942 | 276 | 131 | 9 | 34 | 291 | 20 | 281 | 6.82e-61 | 195 |
MS.gene22395.t1 | AT2G01850 | 39.015 | 264 | 150 | 4 | 36 | 291 | 30 | 290 | 9.21e-60 | 194 |
MS.gene22395.t1 | AT5G57530 | 41.509 | 265 | 136 | 8 | 37 | 291 | 27 | 282 | 1.49e-59 | 191 |
MS.gene22395.t1 | AT4G25810 | 41.697 | 271 | 135 | 9 | 34 | 291 | 23 | 283 | 4.86e-59 | 190 |
MS.gene22395.t1 | AT5G65730 | 38.519 | 270 | 145 | 7 | 33 | 291 | 31 | 290 | 5.38e-58 | 188 |
MS.gene22395.t1 | AT4G25820 | 42.857 | 266 | 133 | 9 | 36 | 291 | 29 | 285 | 1.61e-57 | 186 |
MS.gene22395.t1 | AT5G48070 | 39.925 | 268 | 135 | 8 | 36 | 291 | 28 | 281 | 2.15e-57 | 186 |
MS.gene22395.t1 | AT4G18990 | 40.000 | 260 | 130 | 5 | 53 | 291 | 58 | 312 | 5.80e-57 | 187 |
MS.gene22395.t1 | AT5G57540 | 41.132 | 265 | 137 | 9 | 37 | 291 | 26 | 281 | 1.02e-56 | 184 |
MS.gene22395.t1 | AT4G30290 | 40.264 | 303 | 142 | 9 | 1 | 291 | 1 | 276 | 1.21e-56 | 184 |
MS.gene22395.t1 | AT4G30270 | 41.107 | 253 | 124 | 8 | 45 | 291 | 32 | 265 | 2.41e-56 | 183 |
MS.gene22395.t1 | AT1G11545 | 38.267 | 277 | 140 | 8 | 34 | 291 | 35 | 299 | 6.05e-56 | 183 |
MS.gene22395.t1 | AT4G13090 | 38.047 | 297 | 156 | 7 | 5 | 291 | 10 | 288 | 1.20e-55 | 182 |
MS.gene22395.t1 | AT2G18800 | 37.500 | 280 | 141 | 9 | 36 | 291 | 27 | 296 | 2.11e-55 | 181 |
MS.gene22395.t1 | AT1G65310 | 45.259 | 232 | 110 | 8 | 66 | 291 | 61 | 281 | 3.90e-55 | 180 |
MS.gene22395.t1 | AT4G30280 | 44.255 | 235 | 108 | 7 | 66 | 291 | 61 | 281 | 4.40e-55 | 180 |
MS.gene22395.t1 | AT1G65310 | 45.259 | 232 | 110 | 8 | 66 | 291 | 83 | 303 | 5.81e-55 | 180 |
MS.gene22395.t1 | AT3G25050 | 35.075 | 268 | 158 | 6 | 33 | 292 | 31 | 290 | 2.00e-54 | 179 |
MS.gene22395.t1 | AT2G06850 | 38.545 | 275 | 148 | 8 | 28 | 291 | 26 | 290 | 2.75e-54 | 178 |
MS.gene22395.t1 | AT2G14620 | 36.131 | 274 | 156 | 8 | 29 | 291 | 29 | 294 | 8.46e-54 | 177 |
MS.gene22395.t1 | AT5G13870 | 39.496 | 238 | 129 | 6 | 61 | 291 | 58 | 287 | 9.08e-54 | 177 |
MS.gene22395.t1 | AT5G13870 | 39.496 | 238 | 129 | 6 | 61 | 291 | 58 | 287 | 9.08e-54 | 177 |
MS.gene22395.t1 | AT5G13870 | 39.496 | 238 | 129 | 6 | 61 | 291 | 58 | 287 | 9.08e-54 | 177 |
MS.gene22395.t1 | AT4G13080 | 38.023 | 263 | 145 | 7 | 37 | 291 | 39 | 291 | 1.38e-52 | 174 |
MS.gene22395.t1 | AT4G37800 | 38.060 | 268 | 149 | 6 | 33 | 291 | 30 | 289 | 1.63e-52 | 174 |
MS.gene22395.t1 | AT4G03210 | 35.878 | 262 | 139 | 5 | 37 | 283 | 29 | 276 | 5.06e-52 | 172 |
MS.gene22395.t1 | AT2G06850 | 41.102 | 236 | 120 | 7 | 65 | 291 | 5 | 230 | 1.01e-51 | 170 |
MS.gene22395.t1 | AT4G03210 | 37.109 | 256 | 129 | 6 | 51 | 291 | 18 | 256 | 2.12e-50 | 167 |
MS.gene22395.t1 | AT2G14620 | 36.179 | 246 | 140 | 7 | 55 | 291 | 7 | 244 | 3.81e-49 | 164 |
MS.gene22395.t1 | AT4G28850 | 34.926 | 272 | 157 | 8 | 32 | 291 | 24 | 287 | 6.12e-49 | 164 |
MS.gene22395.t1 | AT2G14620 | 37.168 | 226 | 125 | 7 | 75 | 291 | 16 | 233 | 5.42e-46 | 155 |
MS.gene22395.t1 | AT4G18990 | 40.092 | 217 | 104 | 5 | 96 | 291 | 27 | 238 | 8.50e-44 | 151 |
MS.gene22395.t1 | AT3G48580 | 34.766 | 256 | 134 | 10 | 45 | 291 | 42 | 273 | 1.42e-38 | 137 |
MS.gene22395.t1 | AT3G48580 | 33.906 | 233 | 126 | 8 | 65 | 291 | 4 | 214 | 1.58e-35 | 127 |
MS.gene22395.t1 | AT3G48580 | 30.859 | 256 | 124 | 11 | 45 | 291 | 42 | 253 | 9.75e-24 | 97.8 |
Find 77 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACAAAATGCATTAACTATT+TGG | 0.118568 | 7.3:-11317831 | MS.gene22395:CDS |
CCGTTTCGATCTGGCTATTT+TGG | 0.134142 | 7.3:-11317670 | MS.gene22395:CDS |
ATTAGACCAATGTGGCTTTA+TGG | 0.169563 | 7.3:-11315611 | MS.gene22395:CDS |
GATTAAACTCACAACAAAAT+AGG | 0.178606 | 7.3:-11315421 | MS.gene22395:CDS |
TAAAGCCACATTGGTCTAAT+TGG | 0.229363 | 7.3:+11315614 | None:intergenic |
GTGACTTACATTATCTCTTT+AGG | 0.271288 | 7.3:+11317167 | None:intergenic |
TGTGGCTTTATGGTTCAATA+TGG | 0.272583 | 7.3:-11315601 | MS.gene22395:CDS |
TTCCTCGGGTACCTCCTTAT+TGG | 0.277629 | 7.3:+11315653 | None:intergenic |
TTTATTTAACCCCAACATTC+AGG | 0.280498 | 7.3:+11315323 | None:intergenic |
GAGAAATGAAGTTTCATCTT+TGG | 0.298153 | 7.3:-11317235 | MS.gene22395:CDS |
ATAACCAGGTTGAAGCTTAA+TGG | 0.307755 | 7.3:+11317642 | None:intergenic |
GGCCACCTTCACCAGGCTAT+TGG | 0.328340 | 7.3:-11317930 | MS.gene22395:CDS |
TTCATCACTATGCTATACTA+TGG | 0.351229 | 7.3:-11317193 | MS.gene22395:CDS |
CAGACCAATGTTTATGTAAG+AGG | 0.355685 | 7.3:-11317284 | MS.gene22395:CDS |
GAGTTTCTTGGAACAACATT+TGG | 0.363278 | 7.3:-11317323 | MS.gene22395:CDS |
ACATTGGTCTGCAAAGTATA+AGG | 0.365369 | 7.3:+11317296 | None:intergenic |
TAGACTAACACCTGAATGTT+GGG | 0.377909 | 7.3:-11315333 | MS.gene22395:CDS |
TCAGCATCACCATATGGTTC+TGG | 0.382882 | 7.3:-11315446 | MS.gene22395:CDS |
AACAGGAAGTGGATTTAAAT+CGG | 0.399827 | 7.3:-11317698 | MS.gene22395:intron |
TCGGTTCGTCCGTTTCGATC+TGG | 0.399991 | 7.3:-11317679 | MS.gene22395:CDS |
GTTGTAGTCTTTGGTGTTGA+GGG | 0.401069 | 7.3:+11317851 | None:intergenic |
CCATATGGTGATGCTGAAAC+TGG | 0.403239 | 7.3:+11315452 | None:intergenic |
CCAGTTTCAGCATCACCATA+TGG | 0.414819 | 7.3:-11315452 | MS.gene22395:CDS |
TTGTGGATGATGTGCCAATA+AGG | 0.417399 | 7.3:-11315667 | MS.gene22395:CDS |
ACAAAATAGGGCTATGAGTT+GGG | 0.435041 | 7.3:-11315408 | MS.gene22395:CDS |
TACAATAATTATAAACCATA+TGG | 0.435446 | 7.3:+11315375 | None:intergenic |
ATTAAACTCACAACAAAATA+GGG | 0.447861 | 7.3:-11315420 | MS.gene22395:CDS |
AATGTTGTGTCACTCTTCCT+CGG | 0.449121 | 7.3:+11315638 | None:intergenic |
GAAGTGGACATTGAGTTTCT+TGG | 0.452892 | 7.3:-11317335 | MS.gene22395:CDS |
ATTTGGCTTGATAGAACCTC+AGG | 0.462755 | 7.3:-11317814 | MS.gene22395:intron |
AGTGGTGATGGGAAAATTGT+AGG | 0.464266 | 7.3:-11317260 | MS.gene22395:CDS |
TTTGAACTTGGCCAATAGCC+TGG | 0.471985 | 7.3:+11317919 | None:intergenic |
TTTGTATATTGTGCAACAAA+TGG | 0.475210 | 7.3:+11315521 | None:intergenic |
TTGGGTGCAAAGATACCATA+TGG | 0.479888 | 7.3:-11315390 | MS.gene22395:CDS |
TCATCATGGGCAACAGAAGA+TGG | 0.483074 | 7.3:-11315572 | MS.gene22395:CDS |
ATGTAAGAGGGAGTGGTGAT+GGG | 0.484590 | 7.3:-11317271 | MS.gene22395:CDS |
AGCATAGTGATGAAAACCTT+TGG | 0.487107 | 7.3:+11317202 | None:intergenic |
AACAAAATAGGGCTATGAGT+TGG | 0.487818 | 7.3:-11315409 | MS.gene22395:CDS |
CCAAAATAGCCAGATCGAAA+CGG | 0.490972 | 7.3:+11317670 | None:intergenic |
TATGTAAGAGGGAGTGGTGA+TGG | 0.502994 | 7.3:-11317272 | MS.gene22395:CDS |
TGTTGTAGTCTTTGGTGTTG+AGG | 0.517034 | 7.3:+11317850 | None:intergenic |
GCTTATTGGCCACCTTCACC+AGG | 0.519429 | 7.3:-11317937 | MS.gene22395:CDS |
CAATATGGGATGCTTCATCA+TGG | 0.519985 | 7.3:-11315586 | MS.gene22395:CDS |
AATGTTTATGTAAGAGGGAG+TGG | 0.522067 | 7.3:-11317278 | MS.gene22395:CDS |
TTTAATCCACCAGAACCATA+TGG | 0.527099 | 7.3:+11315437 | None:intergenic |
ATTATGTGTCAGATTTCTTG+TGG | 0.531400 | 7.3:-11315684 | MS.gene22395:intron |
CTTCAACCTGGTTATACTGC+AGG | 0.532390 | 7.3:-11317634 | MS.gene22395:CDS |
ATAGACTTGAACTTTGAACT+TGG | 0.535880 | 7.3:+11317907 | None:intergenic |
CTTTGGTTTGATCCTACCAA+AGG | 0.537930 | 7.3:-11317218 | MS.gene22395:CDS |
ATGTTGTGTCACTCTTCCTC+GGG | 0.544493 | 7.3:+11315639 | None:intergenic |
GTGGCTTTATGGTTCAATAT+GGG | 0.546084 | 7.3:-11315600 | MS.gene22395:CDS |
GCATCACCATATGGTTCTGG+TGG | 0.546443 | 7.3:-11315443 | MS.gene22395:CDS |
ATAGACTAACACCTGAATGT+TGG | 0.555533 | 7.3:-11315334 | MS.gene22395:CDS |
TATACAAATTTCAAAGCTAG+TGG | 0.558654 | 7.3:-11315506 | MS.gene22395:CDS |
TTTGGTGTTGAGGGCCCCAA+CGG | 0.560236 | 7.3:+11317860 | None:intergenic |
TCAAACAATGAAGCACATCC+TGG | 0.560307 | 7.3:-11317368 | MS.gene22395:CDS |
AGACCAATGTTTATGTAAGA+GGG | 0.563206 | 7.3:-11317283 | MS.gene22395:CDS |
GGCCAATAGCCTGGTGAAGG+TGG | 0.575508 | 7.3:+11317928 | None:intergenic |
TCCACTTCATCATGGTAACC+AGG | 0.575746 | 7.3:+11317350 | None:intergenic |
ACTCAATGTCCACTTCATCA+TGG | 0.586098 | 7.3:+11317342 | None:intergenic |
ATGGCACCAACGAGGTGCAT+AGG | 0.588771 | 7.3:+11315475 | None:intergenic |
TCCTGGTTACCATGATGAAG+TGG | 0.598344 | 7.3:-11317351 | MS.gene22395:CDS |
TATATTGTGCAACAAATGGT+TGG | 0.600462 | 7.3:+11315525 | None:intergenic |
GCACAGCCTATGCACCTCGT+TGG | 0.605322 | 7.3:-11315481 | MS.gene22395:CDS |
TAGTGATGAAAACCTTTGGT+AGG | 0.607983 | 7.3:+11317206 | None:intergenic |
GCTTCCATTAAGCTTCAACC+TGG | 0.609226 | 7.3:-11317646 | MS.gene22395:CDS |
AATATGGGATGCTTCATCAT+GGG | 0.615655 | 7.3:-11315585 | MS.gene22395:CDS |
ATTGAACCATAAAGCCACAT+TGG | 0.615958 | 7.3:+11315605 | None:intergenic |
ACTCCCTCTTACATAAACAT+TGG | 0.616456 | 7.3:+11317280 | None:intergenic |
ATAACTCCTGCAGTATAACC+AGG | 0.626048 | 7.3:+11317628 | None:intergenic |
CATTTCCAATTAGACCAATG+TGG | 0.641551 | 7.3:-11315619 | MS.gene22395:CDS |
TGCCAATAAGGAGGTACCCG+AGG | 0.657088 | 7.3:-11315655 | MS.gene22395:CDS |
AGACTAACACCTGAATGTTG+GGG | 0.661530 | 7.3:-11315332 | MS.gene22395:CDS |
ATGGTGATGCTGAAACTGGA+TGG | 0.663075 | 7.3:+11315456 | None:intergenic |
CTTGGCCAATAGCCTGGTGA+AGG | 0.674426 | 7.3:+11317925 | None:intergenic |
TGGATGATGTGCCAATAAGG+AGG | 0.722240 | 7.3:-11315664 | MS.gene22395:CDS |
GAAACTGGATGGCACCAACG+AGG | 0.789191 | 7.3:+11315467 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATTAATGATTGAATTAT+TGG | - | chr7.3:11315919-11315938 | MS.gene22395:intron | 10.0% |
!! | TACTAATAATTAATTAATCT+AGG | + | chr7.3:11316234-11316253 | None:intergenic | 10.0% |
!!! | TAATAATCTAAAATAGTATA+GGG | - | chr7.3:11316252-11316271 | MS.gene22395:intron | 10.0% |
!!! | TATTATTTTCTAAGAAATAA+AGG | - | chr7.3:11317077-11317096 | MS.gene22395:intron | 10.0% |
!! | AAATTATCCTTATTAACTAT+TGG | + | chr7.3:11316966-11316985 | None:intergenic | 15.0% |
!! | AATAGTTAATAAGGATAATT+TGG | - | chr7.3:11316965-11316984 | MS.gene22395:intron | 15.0% |
!! | AGAAAAAATTATTATTGCAT+TGG | + | chr7.3:11316879-11316898 | None:intergenic | 15.0% |
!! | ATTTAGTGTTATATTGTATT+GGG | - | chr7.3:11317418-11317437 | MS.gene22395:intron | 15.0% |
!! | TACAATAATTATAAACCATA+TGG | + | chr7.3:11317944-11317963 | None:intergenic | 15.0% |
!! | TATTTAGTGTTATATTGTAT+TGG | - | chr7.3:11317417-11317436 | MS.gene22395:intron | 15.0% |
!!! | ATTGTCATTGTTTTTTTTTA+TGG | - | chr7.3:11315590-11315609 | MS.gene22395:CDS | 15.0% |
!!! | CATTTTGAAACAAATTTTTT+TGG | + | chr7.3:11316839-11316858 | None:intergenic | 15.0% |
!!! | GTAATAATCTAAAATAGTAT+AGG | - | chr7.3:11316251-11316270 | MS.gene22395:intron | 15.0% |
!!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr7.3:11316942-11316961 | None:intergenic | 15.0% |
!!! | TGATATTTTGGAATTTTTTA+AGG | - | chr7.3:11316731-11316750 | MS.gene22395:intron | 15.0% |
!!! | TTTTTTTTATGGTAAAAAAC+AGG | - | chr7.3:11315601-11315620 | MS.gene22395:CDS | 15.0% |
!! | AAAAGTGGAATATATTGTAT+TGG | - | chr7.3:11317376-11317395 | MS.gene22395:intron | 20.0% |
!! | AAACTAACCAATAGTTAATA+AGG | - | chr7.3:11316956-11316975 | MS.gene22395:intron | 20.0% |
!! | AAAGTGGAATATATTGTATT+GGG | - | chr7.3:11317377-11317396 | MS.gene22395:intron | 20.0% |
!! | AAATCGAATGGTTTATATTA+AGG | + | chr7.3:11316537-11316556 | None:intergenic | 20.0% |
!! | AACAAAATGCATTAACTATT+TGG | - | chr7.3:11315485-11315504 | MS.gene22395:CDS | 20.0% |
!! | AGTTGTATTGAAAATTGAAA+TGG | - | chr7.3:11317450-11317469 | MS.gene22395:intron | 20.0% |
!! | ATTAAACTCACAACAAAATA+GGG | - | chr7.3:11317896-11317915 | MS.gene22395:CDS | 20.0% |
!! | CATATAGAAATACTAAATCA+AGG | - | chr7.3:11317136-11317155 | MS.gene22395:intron | 20.0% |
!! | GTTGTATTGAAAATTGAAAT+GGG | - | chr7.3:11317451-11317470 | MS.gene22395:intron | 20.0% |
!! | TTATATTAAGGTCAACAAAT+CGG | + | chr7.3:11316525-11316544 | None:intergenic | 20.0% |
!!! | AAGAAAAGTGTATAAATGAA+GGG | - | chr7.3:11317353-11317372 | MS.gene22395:CDS | 20.0% |
!!! | ACATAAGATTTTTTTAACCA+TGG | - | chr7.3:11316433-11316452 | MS.gene22395:intron | 20.0% |
!!! | GACACTTTTTTTTAGAAAAT+AGG | - | chr7.3:11317487-11317506 | MS.gene22395:intron | 20.0% |
!!! | TAAGAAAAGTGTATAAATGA+AGG | - | chr7.3:11317352-11317371 | MS.gene22395:CDS | 20.0% |
!!! | TTCTTAACTTTTCATTAGTT+GGG | + | chr7.3:11317231-11317250 | None:intergenic | 20.0% |
!!! | TTTCTTAACTTTTCATTAGT+TGG | + | chr7.3:11317232-11317251 | None:intergenic | 20.0% |
! | AAAATCATAACATAGAAGTG+TGG | - | chr7.3:11317175-11317194 | MS.gene22395:intron | 25.0% |
! | AAACCATTGATAAAATCGAA+TGG | + | chr7.3:11316549-11316568 | None:intergenic | 25.0% |
! | AATGATTAAGAGAAAGAGAA+TGG | + | chr7.3:11316999-11317018 | None:intergenic | 25.0% |
! | ATCAATTGGTATCAAAGTTT+AGG | - | chr7.3:11316698-11316717 | MS.gene22395:intron | 25.0% |
! | GATTAAACTCACAACAAAAT+AGG | - | chr7.3:11317895-11317914 | MS.gene22395:CDS | 25.0% |
! | TATACAAATTTCAAAGCTAG+TGG | - | chr7.3:11317810-11317829 | MS.gene22395:intron | 25.0% |
! | TTCTAACCATTGATATAGAT+CGG | - | chr7.3:11316489-11316508 | MS.gene22395:intron | 25.0% |
! | TTTGTATATTGTGCAACAAA+TGG | + | chr7.3:11317798-11317817 | None:intergenic | 25.0% |
!! | AAACCATTCGATTTTATCAA+TGG | - | chr7.3:11316543-11316562 | MS.gene22395:intron | 25.0% |
!! | AAATCATAACATAGAAGTGT+GGG | - | chr7.3:11317176-11317195 | MS.gene22395:CDS | 25.0% |
!! | AAGTCTATGAACTTTTACAA+AGG | - | chr7.3:11315424-11315443 | MS.gene22395:CDS | 25.0% |
!! | ATTCGATTTTATCAATGGTT+TGG | - | chr7.3:11316548-11316567 | MS.gene22395:intron | 25.0% |
!! | TTAGTCTATGATCTCTTTTT+GGG | + | chr7.3:11317971-11317990 | None:intergenic | 25.0% |
!! | TTCTAAGAAATAAAGGAAGA+AGG | - | chr7.3:11317084-11317103 | MS.gene22395:intron | 25.0% |
!! | TTGATTGGTTCTTTATCAAT+TGG | - | chr7.3:11316684-11316703 | MS.gene22395:intron | 25.0% |
!!! | AGATTTTTTTAACCATGGTT+TGG | - | chr7.3:11316438-11316457 | MS.gene22395:intron | 25.0% |
!!! | TTTTGGAATTTTTTAAGGAG+TGG | - | chr7.3:11316736-11316755 | MS.gene22395:intron | 25.0% |
AGAAAATAGGTCAGTTATTC+CGG | - | chr7.3:11317500-11317519 | MS.gene22395:intron | 30.0% | |
AGACCAATGTTTATGTAAGA+GGG | - | chr7.3:11316033-11316052 | MS.gene22395:intron | 30.0% | |
ATAAAGGAAGAAGGCAAATA+AGG | - | chr7.3:11317093-11317112 | MS.gene22395:intron | 30.0% | |
ATAGACTTGAACTTTGAACT+TGG | + | chr7.3:11315412-11315431 | None:intergenic | 30.0% | |
ATATAAGTGTGATAGGGAAA+TGG | - | chr7.3:11316315-11316334 | MS.gene22395:intron | 30.0% | |
ATGAGGTATATAAGTGTGAT+AGG | - | chr7.3:11316308-11316327 | MS.gene22395:intron | 30.0% | |
ATTATGTGTCAGATTTCTTG+TGG | - | chr7.3:11317632-11317651 | MS.gene22395:CDS | 30.0% | |
CATTGTCCAATCTTAATCAA+TGG | + | chr7.3:11316384-11316403 | None:intergenic | 30.0% | |
GAGAAATGAAGTTTCATCTT+TGG | - | chr7.3:11316081-11316100 | MS.gene22395:intron | 30.0% | |
GTGACTTACATTATCTCTTT+AGG | + | chr7.3:11316152-11316171 | None:intergenic | 30.0% | |
TAGCTAACTATAGTGATTCT+TGG | - | chr7.3:11316573-11316592 | MS.gene22395:intron | 30.0% | |
TATATTGTGCAACAAATGGT+TGG | + | chr7.3:11317794-11317813 | None:intergenic | 30.0% | |
TGAGGTATATAAGTGTGATA+GGG | - | chr7.3:11316309-11316328 | MS.gene22395:intron | 30.0% | |
TGTATAAATGAAGGGAAAAG+TGG | - | chr7.3:11317361-11317380 | MS.gene22395:CDS | 30.0% | |
TTATGGTAAAAAACAGGAAG+TGG | - | chr7.3:11315607-11315626 | MS.gene22395:CDS | 30.0% | |
TTCATCACTATGCTATACTA+TGG | - | chr7.3:11316123-11316142 | MS.gene22395:intron | 30.0% | |
TTTGTGTGAAAAACCAAAGT+AGG | + | chr7.3:11317331-11317350 | None:intergenic | 30.0% | |
! | AACAGGAAGTGGATTTAAAT+CGG | - | chr7.3:11315618-11315637 | MS.gene22395:CDS | 30.0% |
! | AATCATAACATAGAAGTGTG+GGG | - | chr7.3:11317177-11317196 | MS.gene22395:CDS | 30.0% |
! | CATTGATTAAGATTGGACAA+TGG | - | chr7.3:11316382-11316401 | MS.gene22395:intron | 30.0% |
! | GGCAAGACTTAATGATATTT+TGG | - | chr7.3:11316719-11316738 | MS.gene22395:intron | 30.0% |
! | GTAGTGTACAGAGTATTAAT+TGG | + | chr7.3:11316917-11316936 | None:intergenic | 30.0% |
! | TAGAGAAAACTACATTTTCG+AGG | + | chr7.3:11315802-11315821 | None:intergenic | 30.0% |
! | TGTACAGAGTATTAATTGGA+GGG | + | chr7.3:11316913-11316932 | None:intergenic | 30.0% |
! | TTGAAATGGGTCAGTTATTT+TGG | - | chr7.3:11317464-11317483 | MS.gene22395:intron | 30.0% |
!! | AAACGACACTCATTTTGAAA+CGG | - | chr7.3:11317048-11317067 | MS.gene22395:intron | 30.0% |
!! | ATGCATTTTGTTGTAGTCTT+TGG | + | chr7.3:11315477-11315496 | None:intergenic | 30.0% |
!! | CATTTTCAAGCAATGCTTAT+TGG | - | chr7.3:11315365-11315384 | MS.gene22395:CDS | 30.0% |
!! | GTTAGTCTATGATCTCTTTT+TGG | + | chr7.3:11317972-11317991 | None:intergenic | 30.0% |
!! | TGAAATGGGTCAGTTATTTT+GGG | - | chr7.3:11317465-11317484 | MS.gene22395:intron | 30.0% |
!!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr7.3:11317047-11317066 | None:intergenic | 30.0% |
AACAAAATAGGGCTATGAGT+TGG | - | chr7.3:11317907-11317926 | MS.gene22395:CDS | 35.0% | |
AATATGGGATGCTTCATCAT+GGG | - | chr7.3:11317731-11317750 | MS.gene22395:intron | 35.0% | |
AATGTTTATGTAAGAGGGAG+TGG | - | chr7.3:11316038-11316057 | MS.gene22395:intron | 35.0% | |
ACAAAATAGGGCTATGAGTT+GGG | - | chr7.3:11317908-11317927 | MS.gene22395:CDS | 35.0% | |
ACTCCCTCTTACATAAACAT+TGG | + | chr7.3:11316039-11316058 | None:intergenic | 35.0% | |
AGCATAGTGATGAAAACCTT+TGG | + | chr7.3:11316117-11316136 | None:intergenic | 35.0% | |
ATAGACTAACACCTGAATGT+TGG | - | chr7.3:11317982-11318001 | MS.gene22395:CDS | 35.0% | |
ATTGAACCATAAAGCCACAT+TGG | + | chr7.3:11317714-11317733 | None:intergenic | 35.0% | |
CAAAGTAGGTCAATTATACC+GGG | + | chr7.3:11317317-11317336 | None:intergenic | 35.0% | |
CAGACCAATGTTTATGTAAG+AGG | - | chr7.3:11316032-11316051 | MS.gene22395:intron | 35.0% | |
CATTTCCAATTAGACCAATG+TGG | - | chr7.3:11317697-11317716 | MS.gene22395:intron | 35.0% | |
CCAAAGTAGGTCAATTATAC+CGG | + | chr7.3:11317318-11317337 | None:intergenic | 35.0% | |
CTAAATCAAGGTCACATGAA+TGG | - | chr7.3:11317148-11317167 | MS.gene22395:intron | 35.0% | |
GAAAATAGGTCAGTTATTCC+GGG | - | chr7.3:11317501-11317520 | MS.gene22395:intron | 35.0% | |
GACTATCCGATCTATATCAA+TGG | + | chr7.3:11316498-11316517 | None:intergenic | 35.0% | |
GAGTTTCTTGGAACAACATT+TGG | - | chr7.3:11315993-11316012 | MS.gene22395:intron | 35.0% | |
TAGACTAACACCTGAATGTT+GGG | - | chr7.3:11317983-11318002 | MS.gene22395:CDS | 35.0% | |
TAGTGATGAAAACCTTTGGT+AGG | + | chr7.3:11316113-11316132 | None:intergenic | 35.0% | |
TGTCCAATCTTAATCAATGG+TGG | + | chr7.3:11316381-11316400 | None:intergenic | 35.0% | |
TTTAAGGAGTGGAAAATGAG+AGG | - | chr7.3:11316747-11316766 | MS.gene22395:intron | 35.0% | |
TTTAATCCACCAGAACCATA+TGG | + | chr7.3:11317882-11317901 | None:intergenic | 35.0% | |
TTTCACATTCAGAGACATTG+AGG | + | chr7.3:11316199-11316218 | None:intergenic | 35.0% | |
! | AAAGGTTTTACAAACCGTTG+GGG | - | chr7.3:11315442-11315461 | MS.gene22395:CDS | 35.0% |
! | AATAGTATAGGGTACTAGAC+AGG | - | chr7.3:11316263-11316282 | MS.gene22395:intron | 35.0% |
! | ACAAAGGTTTTACAAACCGT+TGG | - | chr7.3:11315440-11315459 | MS.gene22395:CDS | 35.0% |
! | ACATTGGTCTGCAAAGTATA+AGG | + | chr7.3:11316023-11316042 | None:intergenic | 35.0% |
! | ATAACCAGGTTGAAGCTTAA+TGG | + | chr7.3:11315677-11315696 | None:intergenic | 35.0% |
! | ATTAGACCAATGTGGCTTTA+TGG | - | chr7.3:11317705-11317724 | MS.gene22395:intron | 35.0% |
! | CAAAGGTTTTACAAACCGTT+GGG | - | chr7.3:11315441-11315460 | MS.gene22395:CDS | 35.0% |
! | CACTACTTTCTCTTTTGATG+AGG | - | chr7.3:11316291-11316310 | MS.gene22395:intron | 35.0% |
! | GTGTACAGAGTATTAATTGG+AGG | + | chr7.3:11316914-11316933 | None:intergenic | 35.0% |
! | TAAAGCCACATTGGTCTAAT+TGG | + | chr7.3:11317705-11317724 | None:intergenic | 35.0% |
! | TCTCCACCATTGATTAAGAT+TGG | - | chr7.3:11316375-11316394 | MS.gene22395:intron | 35.0% |
!! | AAGCGACACTCATTTTGAAA+CGG | + | chr7.3:11316813-11316832 | None:intergenic | 35.0% |
!! | GTGGCTTTATGGTTCAATAT+GGG | - | chr7.3:11317716-11317735 | MS.gene22395:intron | 35.0% |
!! | TGTGGCTTTATGGTTCAATA+TGG | - | chr7.3:11317715-11317734 | MS.gene22395:intron | 35.0% |
!! | TTTTAACCATGGTTTGGACT+TGG | - | chr7.3:11316444-11316463 | MS.gene22395:intron | 35.0% |
AAGGCAAATAAGGATGTGAC+AGG | - | chr7.3:11317103-11317122 | MS.gene22395:intron | 40.0% | |
ACTCAATGTCCACTTCATCA+TGG | + | chr7.3:11315977-11315996 | None:intergenic | 40.0% | |
AGACTAACACCTGAATGTTG+GGG | - | chr7.3:11317984-11318003 | MS.gene22395:CDS | 40.0% | |
AGAGAATCCACAATTGAGCT+TGG | - | chr7.3:11316640-11316659 | MS.gene22395:intron | 40.0% | |
ATAACTCCTGCAGTATAACC+AGG | + | chr7.3:11315691-11315710 | None:intergenic | 40.0% | |
ATTGAGCTTGGATTCTGCTT+AGG | - | chr7.3:11316652-11316671 | MS.gene22395:intron | 40.0% | |
CAAACATGCATAGAGTTCAC+TGG | - | chr7.3:11315838-11315857 | MS.gene22395:intron | 40.0% | |
CAATATGGGATGCTTCATCA+TGG | - | chr7.3:11317730-11317749 | MS.gene22395:intron | 40.0% | |
CATGACATGCATGTTTCGAT+TGG | - | chr7.3:11315738-11315757 | MS.gene22395:intron | 40.0% | |
CCAAAATAGCCAGATCGAAA+CGG | + | chr7.3:11315649-11315668 | None:intergenic | 40.0% | |
CCGGTATAATTGACCTACTT+TGG | - | chr7.3:11317315-11317334 | MS.gene22395:CDS | 40.0% | |
CTTAGGTGGCATTGTTTGAT+TGG | - | chr7.3:11316669-11316688 | MS.gene22395:intron | 40.0% | |
GAAGTGGACATTGAGTTTCT+TGG | - | chr7.3:11315981-11316000 | MS.gene22395:intron | 40.0% | |
TAATCACCAAGTCCAAACCA+TGG | + | chr7.3:11316453-11316472 | None:intergenic | 40.0% | |
TCAAACAATGAAGCACATCC+TGG | - | chr7.3:11315948-11315967 | MS.gene22395:intron | 40.0% | |
TTGGGTGCAAAGATACCATA+TGG | - | chr7.3:11317926-11317945 | MS.gene22395:CDS | 40.0% | |
TTGTGGATGATGTGCCAATA+AGG | - | chr7.3:11317649-11317668 | MS.gene22395:CDS | 40.0% | |
! | AATGTTGTGTCACTCTTCCT+CGG | + | chr7.3:11317681-11317700 | None:intergenic | 40.0% |
!! | AGTGGTGATGGGAAAATTGT+AGG | - | chr7.3:11316056-11316075 | MS.gene22395:intron | 40.0% |
!! | ATTTGGCTTGATAGAACCTC+AGG | - | chr7.3:11315502-11315521 | MS.gene22395:CDS | 40.0% |
!! | CTTTGGTTTGATCCTACCAA+AGG | - | chr7.3:11316098-11316117 | MS.gene22395:intron | 40.0% |
!! | GTTGTAGTCTTTGGTGTTGA+GGG | + | chr7.3:11315468-11315487 | None:intergenic | 40.0% |
!! | TGTTGTAGTCTTTGGTGTTG+AGG | + | chr7.3:11315469-11315488 | None:intergenic | 40.0% |
!!! | CGGAGGGAGTATTTTTTTAG+AGG | + | chr7.3:11316793-11316812 | None:intergenic | 40.0% |
!!! | GACACTCATTTTGAAACGGA+GGG | - | chr7.3:11317052-11317071 | MS.gene22395:intron | 40.0% |
!!! | GACACTCATTTTGAAACGGA+GGG | + | chr7.3:11317071-11317052 | None:intergenic | 40.0% |
ATAGGTCAGTTATTCCGGGA+CGG | - | chr7.3:11317505-11317524 | MS.gene22395:intron | 45.0% | |
ATGATCAGACTCAGAACCTG+AGG | + | chr7.3:11315521-11315540 | None:intergenic | 45.0% | |
ATGTAAGAGGGAGTGGTGAT+GGG | - | chr7.3:11316045-11316064 | MS.gene22395:intron | 45.0% | |
CCAGTTTCAGCATCACCATA+TGG | - | chr7.3:11317864-11317883 | MS.gene22395:CDS | 45.0% | |
CTTCAACCTGGTTATACTGC+AGG | - | chr7.3:11315682-11315701 | MS.gene22395:intron | 45.0% | |
GCAGAATCCAAGCTCAATTG+TGG | + | chr7.3:11316650-11316669 | None:intergenic | 45.0% | |
GCTTCCATTAAGCTTCAACC+TGG | - | chr7.3:11315670-11315689 | MS.gene22395:CDS | 45.0% | |
GTAGGTCAATTATACCGGGA+CGG | + | chr7.3:11317313-11317332 | None:intergenic | 45.0% | |
TATGTAAGAGGGAGTGGTGA+TGG | - | chr7.3:11316044-11316063 | MS.gene22395:intron | 45.0% | |
TCAGCATCACCATATGGTTC+TGG | - | chr7.3:11317870-11317889 | MS.gene22395:CDS | 45.0% | |
TCATCATGGGCAACAGAAGA+TGG | - | chr7.3:11317744-11317763 | MS.gene22395:intron | 45.0% | |
TCCACTTCATCATGGTAACC+AGG | + | chr7.3:11315969-11315988 | None:intergenic | 45.0% | |
TCCTGGTTACCATGATGAAG+TGG | - | chr7.3:11315965-11315984 | MS.gene22395:intron | 45.0% | |
TGGATGATGTGCCAATAAGG+AGG | - | chr7.3:11317652-11317671 | MS.gene22395:CDS | 45.0% | |
TTTGAACTTGGCCAATAGCC+TGG | + | chr7.3:11315400-11315419 | None:intergenic | 45.0% | |
! | ATGGTGATGCTGAAACTGGA+TGG | + | chr7.3:11317863-11317882 | None:intergenic | 45.0% |
! | ATGTTGTGTCACTCTTCCTC+GGG | + | chr7.3:11317680-11317699 | None:intergenic | 45.0% |
! | CCATATGGTGATGCTGAAAC+TGG | + | chr7.3:11317867-11317886 | None:intergenic | 45.0% |
! | CCGTTTCGATCTGGCTATTT+TGG | - | chr7.3:11315646-11315665 | MS.gene22395:CDS | 45.0% |
!!! | CGACACTCATTTTGAAACGG+AGG | - | chr7.3:11317051-11317070 | MS.gene22395:intron | 45.0% |
!!! | CGACACTCATTTTGAAACGG+AGG | + | chr7.3:11317070-11317051 | None:intergenic | 45.0% |
GAGCTTGGATTCTGCTTAGG+TGG | - | chr7.3:11316655-11316674 | MS.gene22395:intron | 50.0% | |
GGTGGAGATCGTAACTGTAG+TGG | + | chr7.3:11316363-11316382 | None:intergenic | 50.0% | |
GTCAATTATACCGGGACGGA+GGG | + | chr7.3:11317309-11317328 | None:intergenic | 50.0% | |
TTAGTATACTCCCTCCGTCC+CGG | + | chr7.3:11317522-11317541 | None:intergenic | 50.0% | |
TTCCTCGGGTACCTCCTTAT+TGG | + | chr7.3:11317666-11317685 | None:intergenic | 50.0% | |
!! | GCATCACCATATGGTTCTGG+TGG | - | chr7.3:11317873-11317892 | MS.gene22395:CDS | 50.0% |
ACTGTATACTCCCTCCGTCC+CGG | - | chr7.3:11317296-11317315 | MS.gene22395:CDS | 55.0% | |
ATGGCACCAACGAGGTGCAT+AGG | + | chr7.3:11317844-11317863 | None:intergenic | 55.0% | |
CTTGGCCAATAGCCTGGTGA+AGG | + | chr7.3:11315394-11315413 | None:intergenic | 55.0% | |
GAAACTGGATGGCACCAACG+AGG | + | chr7.3:11317852-11317871 | None:intergenic | 55.0% | |
GCTTATTGGCCACCTTCACC+AGG | - | chr7.3:11315379-11315398 | MS.gene22395:CDS | 55.0% | |
GGTCAATTATACCGGGACGG+AGG | + | chr7.3:11317310-11317329 | None:intergenic | 55.0% | |
GTCAGTTATTCCGGGACGGA+GGG | - | chr7.3:11317509-11317528 | MS.gene22395:intron | 55.0% | |
! | TCGGTTCGTCCGTTTCGATC+TGG | - | chr7.3:11315637-11315656 | MS.gene22395:CDS | 55.0% |
!! | TGCCAATAAGGAGGTACCCG+AGG | - | chr7.3:11317661-11317680 | MS.gene22395:CDS | 55.0% |
!! | TTTGGTGTTGAGGGCCCCAA+CGG | + | chr7.3:11315459-11315478 | None:intergenic | 55.0% |
GCACAGCCTATGCACCTCGT+TGG | - | chr7.3:11317835-11317854 | MS.gene22395:CDS | 60.0% | |
GGCCAATAGCCTGGTGAAGG+TGG | + | chr7.3:11315391-11315410 | None:intergenic | 60.0% | |
GGCCACCTTCACCAGGCTAT+TGG | - | chr7.3:11315386-11315405 | MS.gene22395:CDS | 60.0% | |
GGTCAGTTATTCCGGGACGG+AGG | - | chr7.3:11317508-11317527 | MS.gene22395:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 11315328 | 11318010 | 11315328 | ID=MS.gene22395 |
chr7.3 | mRNA | 11315328 | 11318010 | 11315328 | ID=MS.gene22395.t1;Parent=MS.gene22395 |
chr7.3 | exon | 11317815 | 11318010 | 11317815 | ID=MS.gene22395.t1.exon1;Parent=MS.gene22395.t1 |
chr7.3 | CDS | 11317815 | 11318010 | 11317815 | ID=cds.MS.gene22395.t1;Parent=MS.gene22395.t1 |
chr7.3 | exon | 11317615 | 11317715 | 11317615 | ID=MS.gene22395.t1.exon2;Parent=MS.gene22395.t1 |
chr7.3 | CDS | 11317615 | 11317715 | 11317615 | ID=cds.MS.gene22395.t1;Parent=MS.gene22395.t1 |
chr7.3 | exon | 11317176 | 11317393 | 11317176 | ID=MS.gene22395.t1.exon3;Parent=MS.gene22395.t1 |
chr7.3 | CDS | 11317176 | 11317393 | 11317176 | ID=cds.MS.gene22395.t1;Parent=MS.gene22395.t1 |
chr7.3 | exon | 11315328 | 11315694 | 11315328 | ID=MS.gene22395.t1.exon4;Parent=MS.gene22395.t1 |
chr7.3 | CDS | 11315328 | 11315694 | 11315328 | ID=cds.MS.gene22395.t1;Parent=MS.gene22395.t1 |
Gene Sequence |
Protein sequence |