Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93417.t1 | XP_013469939.1 | 97.6 | 296 | 6 | 1 | 1 | 295 | 1 | 296 | 2.10E-172 | 614.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93417.t1 | Q9ZVK1 | 73.3 | 288 | 77 | 0 | 8 | 295 | 12 | 299 | 1.7e-133 | 476.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93417.t1 | A0A072VQB4 | 97.6 | 296 | 6 | 1 | 1 | 295 | 1 | 296 | 1.5e-172 | 614.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene007553 | MS.gene93417 | PPI |
MS.gene93417 | MS.gene91400 | PPI |
MS.gene45618 | MS.gene93417 | PPI |
MS.gene007392 | MS.gene93417 | PPI |
MS.gene93417 | MS.gene93839 | PPI |
MS.gene011681 | MS.gene93417 | PPI |
MS.gene47447 | MS.gene93417 | PPI |
MS.gene99665 | MS.gene93417 | PPI |
MS.gene22395 | MS.gene93417 | PPI |
MS.gene029764 | MS.gene93417 | PPI |
MS.gene44430 | MS.gene93417 | PPI |
MS.gene93417 | MS.gene49973 | PPI |
MS.gene011682 | MS.gene93417 | PPI |
MS.gene020642 | MS.gene93417 | PPI |
MS.gene45619 | MS.gene93417 | PPI |
MS.gene051431 | MS.gene93417 | PPI |
MS.gene44431 | MS.gene93417 | PPI |
MS.gene60167 | MS.gene93417 | PPI |
MS.gene035020 | MS.gene93417 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93417.t1 | MTR_1g105900 | 97.635 | 296 | 6 | 1 | 1 | 295 | 1 | 296 | 0.0 | 598 |
MS.gene93417.t1 | MTR_4g097700 | 53.282 | 259 | 117 | 4 | 33 | 290 | 69 | 324 | 3.19e-100 | 297 |
MS.gene93417.t1 | MTR_4g097640 | 53.282 | 259 | 117 | 4 | 33 | 290 | 32 | 287 | 4.50e-100 | 295 |
MS.gene93417.t1 | MTR_4g097670 | 53.282 | 259 | 117 | 4 | 33 | 290 | 32 | 287 | 4.50e-100 | 295 |
MS.gene93417.t1 | MTR_1g105495 | 46.875 | 288 | 147 | 3 | 8 | 292 | 12 | 296 | 3.26e-97 | 288 |
MS.gene93417.t1 | MTR_4g128410 | 48.239 | 284 | 141 | 2 | 11 | 292 | 3 | 282 | 2.84e-96 | 285 |
MS.gene93417.t1 | MTR_7g084770 | 50.388 | 258 | 126 | 2 | 33 | 290 | 32 | 287 | 5.05e-94 | 280 |
MS.gene93417.t1 | MTR_7g084760 | 50.388 | 258 | 126 | 2 | 33 | 290 | 32 | 287 | 1.25e-93 | 279 |
MS.gene93417.t1 | MTR_7g084750 | 48.754 | 281 | 136 | 3 | 16 | 290 | 9 | 287 | 2.24e-93 | 278 |
MS.gene93417.t1 | MTR_7g093530 | 48.399 | 281 | 143 | 1 | 12 | 292 | 3 | 281 | 9.35e-93 | 276 |
MS.gene93417.t1 | MTR_3g084620 | 45.862 | 290 | 147 | 2 | 8 | 295 | 1 | 282 | 2.75e-92 | 275 |
MS.gene93417.t1 | MTR_3g084630 | 47.810 | 274 | 133 | 2 | 24 | 295 | 17 | 282 | 8.09e-92 | 274 |
MS.gene93417.t1 | MTR_4g128570 | 48.364 | 275 | 126 | 2 | 17 | 291 | 15 | 273 | 2.43e-91 | 272 |
MS.gene93417.t1 | MTR_4g045853 | 44.178 | 292 | 150 | 5 | 6 | 290 | 3 | 288 | 5.32e-91 | 272 |
MS.gene93417.t1 | MTR_4g126920 | 48.746 | 279 | 131 | 3 | 17 | 292 | 14 | 283 | 2.32e-90 | 270 |
MS.gene93417.t1 | MTR_4g128580 | 50.373 | 268 | 123 | 3 | 30 | 291 | 23 | 286 | 8.93e-90 | 269 |
MS.gene93417.t1 | MTR_2g038860 | 47.887 | 284 | 137 | 2 | 18 | 294 | 11 | 290 | 1.62e-89 | 268 |
MS.gene93417.t1 | MTR_2g038705 | 47.887 | 284 | 137 | 2 | 18 | 294 | 11 | 290 | 1.62e-89 | 268 |
MS.gene93417.t1 | MTR_6g033055 | 49.035 | 259 | 130 | 2 | 33 | 291 | 32 | 288 | 2.65e-89 | 268 |
MS.gene93417.t1 | MTR_8g081040 | 47.826 | 276 | 135 | 2 | 18 | 291 | 14 | 282 | 2.71e-89 | 268 |
MS.gene93417.t1 | MTR_6g033085 | 49.035 | 259 | 130 | 2 | 33 | 291 | 32 | 288 | 1.27e-88 | 266 |
MS.gene93417.t1 | MTR_6g088320 | 43.509 | 285 | 149 | 3 | 8 | 290 | 9 | 283 | 5.18e-88 | 265 |
MS.gene93417.t1 | MTR_4g128400 | 46.975 | 281 | 145 | 2 | 10 | 290 | 7 | 283 | 9.02e-88 | 264 |
MS.gene93417.t1 | MTR_5g091730 | 47.985 | 273 | 135 | 2 | 18 | 290 | 13 | 278 | 1.29e-87 | 263 |
MS.gene93417.t1 | MTR_2g089140 | 43.493 | 292 | 151 | 5 | 6 | 290 | 2 | 286 | 2.18e-87 | 263 |
MS.gene93417.t1 | MTR_8g102910 | 44.361 | 266 | 144 | 2 | 27 | 290 | 16 | 279 | 1.18e-82 | 251 |
MS.gene93417.t1 | MTR_3g089540 | 46.212 | 264 | 135 | 2 | 28 | 290 | 25 | 282 | 1.34e-81 | 248 |
MS.gene93417.t1 | MTR_8g102220 | 44.981 | 269 | 126 | 4 | 24 | 290 | 18 | 266 | 3.79e-81 | 246 |
MS.gene93417.t1 | MTR_4g128590 | 42.955 | 291 | 135 | 4 | 8 | 291 | 10 | 276 | 3.86e-81 | 246 |
MS.gene93417.t1 | MTR_2g089140 | 47.768 | 224 | 109 | 3 | 74 | 290 | 1 | 223 | 2.63e-78 | 238 |
MS.gene93417.t1 | MTR_8g013055 | 42.215 | 289 | 158 | 5 | 6 | 290 | 2 | 285 | 8.29e-76 | 233 |
MS.gene93417.t1 | MTR_7g056090 | 43.463 | 283 | 150 | 6 | 11 | 292 | 10 | 283 | 5.93e-71 | 221 |
MS.gene93417.t1 | MTR_7g102260 | 37.294 | 303 | 167 | 9 | 1 | 291 | 1 | 292 | 9.98e-62 | 197 |
MS.gene93417.t1 | MTR_1g063020 | 38.686 | 274 | 149 | 8 | 25 | 290 | 32 | 294 | 2.81e-61 | 196 |
MS.gene93417.t1 | MTR_4g057450 | 36.156 | 307 | 167 | 9 | 2 | 290 | 9 | 304 | 1.09e-60 | 195 |
MS.gene93417.t1 | MTR_2g049030 | 38.095 | 294 | 162 | 9 | 10 | 295 | 1 | 282 | 3.77e-58 | 188 |
MS.gene93417.t1 | MTR_2g049130 | 40.816 | 245 | 139 | 5 | 33 | 276 | 29 | 268 | 1.07e-56 | 184 |
MS.gene93417.t1 | MTR_1g033420 | 37.594 | 266 | 155 | 7 | 33 | 292 | 33 | 293 | 1.09e-54 | 180 |
MS.gene93417.t1 | MTR_8g064180 | 38.554 | 249 | 142 | 6 | 51 | 290 | 64 | 310 | 7.94e-53 | 175 |
MS.gene93417.t1 | MTR_2g095800 | 35.766 | 274 | 158 | 8 | 25 | 290 | 46 | 309 | 9.86e-52 | 172 |
MS.gene93417.t1 | MTR_5g029100 | 34.307 | 274 | 168 | 6 | 28 | 292 | 37 | 307 | 1.25e-50 | 171 |
MS.gene93417.t1 | MTR_8g090100 | 36.232 | 276 | 157 | 8 | 28 | 292 | 16 | 283 | 5.20e-50 | 168 |
MS.gene93417.t1 | MTR_5g029100 | 34.874 | 238 | 143 | 6 | 64 | 292 | 42 | 276 | 2.15e-45 | 156 |
MS.gene93417.t1 | MTR_8g479340 | 32.632 | 190 | 67 | 3 | 103 | 292 | 9 | 137 | 5.84e-30 | 110 |
MS.gene93417.t1 | MTR_8g032640 | 28.866 | 194 | 130 | 4 | 35 | 226 | 13 | 200 | 2.63e-13 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene93417.t1 | AT2G14620 | 73.264 | 288 | 77 | 0 | 8 | 295 | 12 | 299 | 2.02e-168 | 469 |
MS.gene93417.t1 | AT2G14620 | 75.000 | 232 | 58 | 0 | 64 | 295 | 18 | 249 | 3.92e-139 | 393 |
MS.gene93417.t1 | AT2G14620 | 72.385 | 239 | 65 | 1 | 57 | 295 | 1 | 238 | 7.35e-136 | 384 |
MS.gene93417.t1 | AT1G11545 | 47.440 | 293 | 145 | 5 | 6 | 292 | 12 | 301 | 8.20e-98 | 290 |
MS.gene93417.t1 | AT4G37800 | 47.931 | 290 | 144 | 6 | 4 | 291 | 6 | 290 | 4.23e-96 | 285 |
MS.gene93417.t1 | AT5G65730 | 50.965 | 259 | 123 | 4 | 33 | 290 | 35 | 290 | 7.14e-96 | 285 |
MS.gene93417.t1 | AT3G23730 | 48.387 | 279 | 140 | 2 | 15 | 290 | 9 | 286 | 1.27e-94 | 281 |
MS.gene93417.t1 | AT5G13870 | 46.552 | 290 | 152 | 3 | 1 | 290 | 1 | 287 | 1.45e-94 | 281 |
MS.gene93417.t1 | AT5G13870 | 46.552 | 290 | 152 | 3 | 1 | 290 | 1 | 287 | 1.45e-94 | 281 |
MS.gene93417.t1 | AT5G13870 | 46.552 | 290 | 152 | 3 | 1 | 290 | 1 | 287 | 1.45e-94 | 281 |
MS.gene93417.t1 | AT5G57550 | 47.163 | 282 | 139 | 3 | 14 | 290 | 6 | 282 | 2.05e-92 | 275 |
MS.gene93417.t1 | AT5G57530 | 49.630 | 270 | 124 | 4 | 28 | 292 | 22 | 284 | 8.25e-91 | 271 |
MS.gene93417.t1 | AT2G06850 | 47.350 | 283 | 147 | 2 | 8 | 290 | 10 | 290 | 2.30e-89 | 268 |
MS.gene93417.t1 | AT4G30270 | 47.350 | 283 | 127 | 4 | 9 | 291 | 6 | 266 | 4.96e-89 | 266 |
MS.gene93417.t1 | AT4G03210 | 46.715 | 274 | 142 | 3 | 18 | 290 | 14 | 284 | 8.81e-89 | 266 |
MS.gene93417.t1 | AT5G48070 | 46.099 | 282 | 142 | 5 | 12 | 291 | 9 | 282 | 2.28e-88 | 265 |
MS.gene93417.t1 | AT2G18800 | 46.021 | 289 | 139 | 3 | 17 | 291 | 12 | 297 | 2.40e-88 | 266 |
MS.gene93417.t1 | AT5G57560 | 44.043 | 277 | 146 | 2 | 19 | 290 | 9 | 281 | 2.51e-86 | 260 |
MS.gene93417.t1 | AT5G57540 | 47.529 | 263 | 134 | 2 | 31 | 292 | 24 | 283 | 2.59e-86 | 260 |
MS.gene93417.t1 | AT4G25810 | 43.902 | 287 | 151 | 3 | 8 | 290 | 3 | 283 | 1.34e-85 | 258 |
MS.gene93417.t1 | AT4G14130 | 45.683 | 278 | 145 | 3 | 15 | 290 | 11 | 284 | 3.26e-85 | 257 |
MS.gene93417.t1 | AT4G28850 | 43.816 | 283 | 151 | 3 | 19 | 295 | 12 | 292 | 6.45e-85 | 257 |
MS.gene93417.t1 | AT2G06850 | 52.838 | 229 | 106 | 2 | 62 | 290 | 4 | 230 | 7.55e-84 | 252 |
MS.gene93417.t1 | AT4G30290 | 46.975 | 281 | 141 | 4 | 12 | 291 | 4 | 277 | 1.05e-82 | 251 |
MS.gene93417.t1 | AT4G30280 | 47.687 | 281 | 139 | 4 | 12 | 291 | 9 | 282 | 1.67e-82 | 250 |
MS.gene93417.t1 | AT4G03210 | 50.661 | 227 | 110 | 2 | 65 | 290 | 31 | 256 | 1.23e-81 | 247 |
MS.gene93417.t1 | AT3G25050 | 46.332 | 259 | 134 | 4 | 33 | 290 | 35 | 289 | 2.25e-81 | 248 |
MS.gene93417.t1 | AT1G65310 | 48.679 | 265 | 129 | 3 | 28 | 291 | 24 | 282 | 2.27e-81 | 247 |
MS.gene93417.t1 | AT1G65310 | 48.679 | 265 | 129 | 3 | 28 | 291 | 46 | 304 | 2.75e-81 | 248 |
MS.gene93417.t1 | AT4G25820 | 45.489 | 266 | 141 | 2 | 28 | 292 | 25 | 287 | 4.20e-79 | 242 |
MS.gene93417.t1 | AT4G13090 | 42.294 | 279 | 154 | 4 | 17 | 290 | 12 | 288 | 8.79e-75 | 231 |
MS.gene93417.t1 | AT4G13080 | 40.278 | 288 | 159 | 5 | 11 | 290 | 9 | 291 | 1.19e-72 | 226 |
MS.gene93417.t1 | AT1G14720 | 37.288 | 295 | 164 | 7 | 12 | 290 | 1 | 290 | 1.20e-60 | 196 |
MS.gene93417.t1 | AT1G32170 | 40.541 | 259 | 140 | 8 | 44 | 293 | 44 | 297 | 2.83e-56 | 185 |
MS.gene93417.t1 | AT2G36870 | 37.956 | 274 | 151 | 8 | 25 | 290 | 35 | 297 | 1.02e-55 | 182 |
MS.gene93417.t1 | AT2G01850 | 35.862 | 290 | 177 | 6 | 6 | 290 | 5 | 290 | 2.64e-55 | 182 |
MS.gene93417.t1 | AT1G10550 | 36.187 | 257 | 149 | 6 | 47 | 290 | 55 | 309 | 7.37e-52 | 172 |
MS.gene93417.t1 | AT3G44990 | 35.036 | 274 | 159 | 8 | 25 | 290 | 31 | 293 | 2.01e-50 | 168 |
MS.gene93417.t1 | AT4G18990 | 36.090 | 266 | 150 | 7 | 44 | 292 | 52 | 314 | 4.58e-48 | 164 |
MS.gene93417.t1 | AT3G48580 | 36.122 | 263 | 138 | 8 | 38 | 290 | 31 | 273 | 1.71e-44 | 152 |
MS.gene93417.t1 | AT3G48580 | 36.596 | 235 | 118 | 7 | 63 | 290 | 4 | 214 | 2.00e-42 | 145 |
MS.gene93417.t1 | AT4G18990 | 36.453 | 203 | 113 | 5 | 104 | 292 | 40 | 240 | 2.19e-38 | 137 |
MS.gene93417.t1 | AT2G36870 | 40.411 | 146 | 77 | 3 | 25 | 162 | 35 | 178 | 9.91e-29 | 108 |
MS.gene93417.t1 | AT3G48580 | 30.337 | 267 | 128 | 9 | 38 | 290 | 31 | 253 | 4.57e-28 | 109 |
Find 71 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACAAAACTTATCTTCTTCTT+TGG | 0.192554 | 1.1:+75995683 | MS.gene93417:CDS |
CAAGTCTATTTCATCTCTAT+TGG | 0.194748 | 1.1:-75996954 | None:intergenic |
TGGTTTCTATACACTCTTAT+AGG | 0.254859 | 1.1:-75997987 | None:intergenic |
GAAATAGACTTGGAGTTTCT+TGG | 0.266039 | 1.1:+75996965 | MS.gene93417:CDS |
ATATTTGTTTGAAGAATATA+TGG | 0.266432 | 1.1:-75997004 | None:intergenic |
ATTCCTTAGGAAGATTGTTT+TGG | 0.294463 | 1.1:-75998328 | None:intergenic |
ATAAGGACTTCTTTGTGATA+TGG | 0.295427 | 1.1:+75995768 | MS.gene93417:CDS |
AGACTCATTGGTTGCCATCT+AGG | 0.322432 | 1.1:-75998032 | None:intergenic |
CAAAACTTATCTTCTTCTTT+GGG | 0.344087 | 1.1:+75995684 | MS.gene93417:CDS |
CATCCCCTGTGGTCAATACT+TGG | 0.347643 | 1.1:-75998360 | None:intergenic |
AAGTCTATTTCATCTCTATT+GGG | 0.354185 | 1.1:-75996953 | None:intergenic |
TCCACAAGACAGAATAAGTA+TGG | 0.354945 | 1.1:-75997093 | None:intergenic |
TTCAACAGGTGACTTCAATA+AGG | 0.362687 | 1.1:+75995751 | MS.gene93417:CDS |
AAGAGATTTCTTACACAATC+TGG | 0.365282 | 1.1:-75997123 | None:intergenic |
GTCAGATGTGTTTACATGAT+TGG | 0.376336 | 1.1:-75995795 | None:intergenic |
TTTGAACCACCTCCTTTGTA+TGG | 0.378733 | 1.1:-75998252 | None:intergenic |
TTTGGAACCTCTCATTATCT+TGG | 0.380577 | 1.1:-75998310 | None:intergenic |
TACAAAGGAGGTGGTTCAAA+TGG | 0.380666 | 1.1:+75998255 | MS.gene93417:CDS |
ATAGCTTCTATTGTTTCAAC+AGG | 0.383600 | 1.1:+75995737 | MS.gene93417:CDS |
TTGAAACTTGATCAAGAATC+TGG | 0.385536 | 1.1:+75995836 | MS.gene93417:CDS |
TATTACCTTATGCAGGTTCA+TGG | 0.397861 | 1.1:+75997953 | MS.gene93417:intron |
TTAGTGAGCTAAAGTTGAAT+TGG | 0.400906 | 1.1:-75998226 | None:intergenic |
CCCTTTGGAATGGTGATAGT+TGG | 0.405591 | 1.1:+75998063 | MS.gene93417:CDS |
ATGCTACTCCTTTGTCTGCA+TGG | 0.429367 | 1.1:-75998007 | None:intergenic |
AAGGAGTAGCATTTCCTAGA+TGG | 0.432572 | 1.1:+75998018 | MS.gene93417:CDS |
GAGTTTCTTGGAAACGTCTC+CGG | 0.437604 | 1.1:+75996977 | MS.gene93417:CDS |
CAAACAAATATTTATGCAGA+TGG | 0.437953 | 1.1:+75997016 | MS.gene93417:CDS |
TCCATACTTATTCTGTCTTG+TGG | 0.438586 | 1.1:+75997092 | MS.gene93417:CDS |
GTTGAATTGGTTCCACCAAT+TGG | 0.443321 | 1.1:-75998213 | None:intergenic |
GAGCAGCAAGTTCTACCAAT+TGG | 0.458468 | 1.1:+75998198 | MS.gene93417:CDS |
CCTTTGGAATGGTGATAGTT+GGG | 0.462412 | 1.1:+75998064 | MS.gene93417:CDS |
TGAGTCTAAAAGCAACCCTT+TGG | 0.463123 | 1.1:+75998048 | MS.gene93417:CDS |
TGATTCTGCAGGCACAGTAC+TGG | 0.464803 | 1.1:+75996815 | MS.gene93417:CDS |
GTGGCCAAGATAAAATTGAT+TGG | 0.468420 | 1.1:+75998096 | MS.gene93417:CDS |
TCAGATGTGTTTACATGATT+GGG | 0.485733 | 1.1:-75995794 | None:intergenic |
GGAGGTGGTTCAAATGGGTT+AGG | 0.486220 | 1.1:+75998261 | MS.gene93417:CDS |
TTGCTGCTCTACAAAACCTT+GGG | 0.486383 | 1.1:-75998184 | None:intergenic |
TTGGGAAGAGAACATTCCTT+AGG | 0.494262 | 1.1:-75998341 | None:intergenic |
ATAAGTATGGAAATCCTTTG+TGG | 0.509761 | 1.1:-75997080 | None:intergenic |
TTGATGCTTGTGTGTGGAAA+GGG | 0.510701 | 1.1:+75998159 | MS.gene93417:CDS |
TTGAAGAATATATGGCTGTC+CGG | 0.519438 | 1.1:-75996996 | None:intergenic |
CTTGCTGCTCTACAAAACCT+TGG | 0.522800 | 1.1:-75998185 | None:intergenic |
CAATAGAGATGAAATAGACT+TGG | 0.525633 | 1.1:+75996955 | MS.gene93417:CDS |
TAAGTATGGAAATCCTTTGT+GGG | 0.528332 | 1.1:-75997079 | None:intergenic |
ACAAAGGAGGTGGTTCAAAT+GGG | 0.532504 | 1.1:+75998256 | MS.gene93417:CDS |
CCCAACTATCACCATTCCAA+AGG | 0.544491 | 1.1:-75998064 | None:intergenic |
GATTCGACAATCGAGAAGAA+AGG | 0.549850 | 1.1:+75997038 | MS.gene93417:CDS |
CCAACTATCACCATTCCAAA+GGG | 0.550525 | 1.1:-75998063 | None:intergenic |
GTTCCAAAACAATCTTCCTA+AGG | 0.553708 | 1.1:+75998325 | MS.gene93417:CDS |
ATCCCCTGTGGTCAATACTT+GGG | 0.563999 | 1.1:-75998359 | None:intergenic |
TGAAGCATGAAACAAAATTG+AGG | 0.567578 | 1.1:-75995714 | None:intergenic |
GTGTGTGGAAAGGGAACCCA+AGG | 0.571921 | 1.1:+75998168 | MS.gene93417:CDS |
CTAGTACCAGGTGATTCTGC+AGG | 0.582195 | 1.1:+75996804 | MS.gene93417:CDS |
CAGCAAGTTCTACCAATTGG+TGG | 0.587858 | 1.1:+75998201 | MS.gene93417:CDS |
ATTGATGCTTGTGTGTGGAA+AGG | 0.589595 | 1.1:+75998158 | MS.gene93417:CDS |
TTTCTGAATGAAGCTATGAA+AGG | 0.593929 | 1.1:-75998128 | None:intergenic |
CTAAAAGCAACCCTTTGGAA+TGG | 0.600409 | 1.1:+75998053 | MS.gene93417:CDS |
GGCAATAGTCATAAATCATG+TGG | 0.604719 | 1.1:-75998289 | None:intergenic |
ATAAAATTGATGCTTGTGTG+TGG | 0.605204 | 1.1:+75998153 | MS.gene93417:CDS |
GATAGTTGGGCAACAAGAGG+TGG | 0.606924 | 1.1:+75998077 | MS.gene93417:CDS |
TAACATCCATACAAAGGAGG+TGG | 0.618108 | 1.1:+75998246 | MS.gene93417:CDS |
TATAGAAACCATGCAGACAA+AGG | 0.619279 | 1.1:+75997999 | MS.gene93417:CDS |
ATGCAAATCAAACTAGTACC+AGG | 0.627832 | 1.1:+75996792 | MS.gene93417:CDS |
GAGAAGAAAGGATTTATCTG+TGG | 0.628619 | 1.1:+75997050 | MS.gene93417:CDS |
GGTGATAGTTGGGCAACAAG+AGG | 0.640344 | 1.1:+75998074 | MS.gene93417:CDS |
ACTATTGCCAAGATAATGAG+AGG | 0.647421 | 1.1:+75998303 | MS.gene93417:CDS |
CATGTAAACACATCTGACGA+TGG | 0.655900 | 1.1:+75995800 | MS.gene93417:CDS |
GCTCACTAACATCCATACAA+AGG | 0.659041 | 1.1:+75998240 | MS.gene93417:CDS |
TCTGTGGTTCGATCCCACAA+AGG | 0.668683 | 1.1:+75997066 | MS.gene93417:CDS |
ACTGTGCCTGCAGAATCACC+TGG | 0.669587 | 1.1:-75996810 | None:intergenic |
CACTAACATCCATACAAAGG+AGG | 0.669864 | 1.1:+75998243 | MS.gene93417:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAATTAAAATTTGCATTTTT+TGG | - | chr1.1:75996530-75996549 | None:intergenic | 10.0% |
!! | AAACAGAAAATAAAAGTAAA+TGG | - | chr1.1:75996860-75996879 | None:intergenic | 15.0% |
!! | AATAAAAAAAATTACACATG+TGG | - | chr1.1:75996124-75996143 | None:intergenic | 15.0% |
!! | ATATTTGTTTGAAGAATATA+TGG | - | chr1.1:75997007-75997026 | None:intergenic | 15.0% |
!! | ATTCATTATTCATCTATTAT+TGG | - | chr1.1:75997420-75997439 | None:intergenic | 15.0% |
!! | ATTTGAAAATGTTATCAATT+TGG | + | chr1.1:75997660-75997679 | MS.gene93417:intron | 15.0% |
!! | CATATTTATATATACAAAGA+AGG | + | chr1.1:75997601-75997620 | MS.gene93417:intron | 15.0% |
!! | TATTATATTAGAGATAAAGT+TGG | - | chr1.1:75997521-75997540 | None:intergenic | 15.0% |
!! | TTAAGCCTTAAAATTATTAT+CGG | + | chr1.1:75996413-75996432 | MS.gene93417:intron | 15.0% |
!! | TTTATCTCTAATATAATATG+TGG | + | chr1.1:75997523-75997542 | MS.gene93417:intron | 15.0% |
!!! | AAAATCGAATTATTTTAGTT+AGG | + | chr1.1:75996344-75996363 | MS.gene93417:intron | 15.0% |
!!! | AAATCGAATTATTTTAGTTA+GGG | + | chr1.1:75996345-75996364 | MS.gene93417:intron | 15.0% |
!!! | GAAATATATGATTTTATATG+AGG | - | chr1.1:75997770-75997789 | None:intergenic | 15.0% |
!!! | TAACTAAAATAATTCGATTT+TGG | - | chr1.1:75996345-75996364 | None:intergenic | 15.0% |
!!! | TTTTATTTTCTGTTTGTTTT+TGG | + | chr1.1:75996865-75996884 | MS.gene93417:intron | 15.0% |
!! | AATAAAAAAAATTACACACG+TGG | + | chr1.1:75996246-75996265 | MS.gene93417:intron | 20.0% |
!! | GATAAAATTGATTGGAAAAA+TGG | + | chr1.1:75998104-75998123 | MS.gene93417:CDS | 20.0% |
!! | TCATTTCTTAATTATGAGTT+TGG | + | chr1.1:75996707-75996726 | MS.gene93417:intron | 20.0% |
!! | TGTATAGAATCAAATCAATT+TGG | + | chr1.1:75996902-75996921 | MS.gene93417:intron | 20.0% |
!! | TTTGTCCAAATAAAAACATT+TGG | - | chr1.1:75996767-75996786 | None:intergenic | 20.0% |
!!! | AATCGAATTATTTTAGTTAG+GGG | + | chr1.1:75996346-75996365 | MS.gene93417:intron | 20.0% |
!!! | AGTTTTCTAAATAAGATACA+TGG | + | chr1.1:75997912-75997931 | MS.gene93417:intron | 20.0% |
!!! | ATCTTATTTAGAAAACTTGA+TGG | - | chr1.1:75997909-75997928 | None:intergenic | 20.0% |
!!! | TATAAATATGTGCATTGATT+TGG | - | chr1.1:75997591-75997610 | None:intergenic | 20.0% |
!!! | TGTTCCACTTTTTAAAATTA+GGG | + | chr1.1:75995989-75996008 | MS.gene93417:intron | 20.0% |
!!! | TTAACCCTAATTTTAAAAAG+TGG | - | chr1.1:75995996-75996015 | None:intergenic | 20.0% |
!!! | TTGTTCCACTTTTTAAAATT+AGG | + | chr1.1:75995988-75996007 | MS.gene93417:intron | 20.0% |
!!! | TTTTCCAATCAATTTTATCT+TGG | - | chr1.1:75998103-75998122 | None:intergenic | 20.0% |
!!! | TTTTCTTAGTCATTTTCATA+TGG | - | chr1.1:75997469-75997488 | None:intergenic | 20.0% |
! | AACAAATTAAACAAGTGCAT+AGG | - | chr1.1:75997367-75997386 | None:intergenic | 25.0% |
! | AAGTCTATTTCATCTCTATT+GGG | - | chr1.1:75996956-75996975 | None:intergenic | 25.0% |
! | AATCTCTGTAATTACTATCA+GGG | - | chr1.1:75997837-75997856 | None:intergenic | 25.0% |
! | ACAAAACTTATCTTCTTCTT+TGG | + | chr1.1:75995683-75995702 | MS.gene93417:CDS | 25.0% |
! | ACAAATTAAACAAGTGCATA+GGG | - | chr1.1:75997366-75997385 | None:intergenic | 25.0% |
! | AGTCTATAAATTGTTGAAGT+AGG | - | chr1.1:75997217-75997236 | None:intergenic | 25.0% |
! | AGTTTATGAATTGTTGAAGT+AGG | + | chr1.1:75997265-75997284 | MS.gene93417:intron | 25.0% |
! | ATAACAATATTACCTTATGC+AGG | + | chr1.1:75997946-75997965 | MS.gene93417:intron | 25.0% |
! | CAAAACTTATCTTCTTCTTT+GGG | + | chr1.1:75995684-75995703 | MS.gene93417:CDS | 25.0% |
! | CAAACAAATATTTATGCAGA+TGG | + | chr1.1:75997016-75997035 | MS.gene93417:CDS | 25.0% |
! | TGAAAATGACTAAGAAAACA+AGG | + | chr1.1:75997471-75997490 | MS.gene93417:intron | 25.0% |
! | TTGAATGTAATGACATGTAT+CGG | - | chr1.1:75995968-75995987 | None:intergenic | 25.0% |
!! | AAGTTGGTTAATAGTTAGTT+AGG | - | chr1.1:75997505-75997524 | None:intergenic | 25.0% |
!! | ATTAGGGTTAATAACAGTTT+TGG | + | chr1.1:75996005-75996024 | MS.gene93417:intron | 25.0% |
!! | TGACACCGATAATAATTTTA+AGG | - | chr1.1:75996421-75996440 | None:intergenic | 25.0% |
!!! | AAATGTTATCAATTTGGTGT+TGG | + | chr1.1:75997666-75997685 | MS.gene93417:intron | 25.0% |
!!! | AATGTTATCAATTTGGTGTT+GGG | + | chr1.1:75997667-75997686 | MS.gene93417:intron | 25.0% |
!!! | ATCGAATTATTTTAGTTAGG+GGG | + | chr1.1:75996347-75996366 | MS.gene93417:intron | 25.0% |
!!! | TCGAACCAAATGTTTTTATT+TGG | + | chr1.1:75996759-75996778 | MS.gene93417:CDS | 25.0% |
AAGAGATTTCTTACACAATC+TGG | - | chr1.1:75997126-75997145 | None:intergenic | 30.0% | |
ATAAAATTGATGCTTGTGTG+TGG | + | chr1.1:75998153-75998172 | MS.gene93417:CDS | 30.0% | |
ATAAGGACTTCTTTGTGATA+TGG | + | chr1.1:75995768-75995787 | MS.gene93417:CDS | 30.0% | |
ATAAGTATGGAAATCCTTTG+TGG | - | chr1.1:75997083-75997102 | None:intergenic | 30.0% | |
ATAGCTTCTATTGTTTCAAC+AGG | + | chr1.1:75995737-75995756 | MS.gene93417:CDS | 30.0% | |
CAAGTCTATTTCATCTCTAT+TGG | - | chr1.1:75996957-75996976 | None:intergenic | 30.0% | |
CAATAGAGATGAAATAGACT+TGG | + | chr1.1:75996955-75996974 | MS.gene93417:CDS | 30.0% | |
GAAATGAATACACTTCTAAG+AGG | - | chr1.1:75996694-75996713 | None:intergenic | 30.0% | |
GAATCTCTGTAATTACTATC+AGG | - | chr1.1:75997838-75997857 | None:intergenic | 30.0% | |
GGCAATGTCTTATACAAAAA+CGG | - | chr1.1:75996673-75996692 | None:intergenic | 30.0% | |
GTTGAAGTAGGAGAAAATTT+GGG | + | chr1.1:75997277-75997296 | MS.gene93417:intron | 30.0% | |
TAAGTATGGAAATCCTTTGT+GGG | - | chr1.1:75997082-75997101 | None:intergenic | 30.0% | |
TCAGATGTGTTTACATGATT+GGG | - | chr1.1:75995797-75995816 | None:intergenic | 30.0% | |
TGAAGCATGAAACAAAATTG+AGG | - | chr1.1:75995717-75995736 | None:intergenic | 30.0% | |
TGGTCAAGTTATCACTAAAT+GGG | - | chr1.1:75997400-75997419 | None:intergenic | 30.0% | |
TGGTTTCTATACACTCTTAT+AGG | - | chr1.1:75997990-75998009 | None:intergenic | 30.0% | |
TGTTGAAGTAGGAGAAAATT+TGG | + | chr1.1:75997276-75997295 | MS.gene93417:intron | 30.0% | |
TTAGTGAGCTAAAGTTGAAT+TGG | - | chr1.1:75998229-75998248 | None:intergenic | 30.0% | |
TTGAAACTTGATCAAGAATC+TGG | + | chr1.1:75995836-75995855 | MS.gene93417:CDS | 30.0% | |
TTGGTCAAGTTATCACTAAA+TGG | - | chr1.1:75997401-75997420 | None:intergenic | 30.0% | |
TTTCTGAATGAAGCTATGAA+AGG | - | chr1.1:75998131-75998150 | None:intergenic | 30.0% | |
! | AAAATGACAAAAGTGCAAAG+GGG | - | chr1.1:75996077-75996096 | None:intergenic | 30.0% |
! | ATTCCTTAGGAAGATTGTTT+TGG | - | chr1.1:75998331-75998350 | None:intergenic | 30.0% |
! | CAAAATGACAAAAGTGCAAA+GGG | - | chr1.1:75996078-75996097 | None:intergenic | 30.0% |
! | CATAGTTGTTGATAAGTAGT+TGG | - | chr1.1:75997164-75997183 | None:intergenic | 30.0% |
! | GTTTCAAAAAGTTGCGATTT+TGG | - | chr1.1:75996373-75996392 | None:intergenic | 30.0% |
! | TCAAAATGACAAAAGTGCAA+AGG | - | chr1.1:75996079-75996098 | None:intergenic | 30.0% |
! | TTAAGGCTTAATAGCAGTTT+TGG | - | chr1.1:75996404-75996423 | None:intergenic | 30.0% |
!! | AAGTGTTGGTACTTAGATAT+TGG | - | chr1.1:75995914-75995933 | None:intergenic | 30.0% |
!! | AGAAGAAGATAAGTTTTGTG+TGG | - | chr1.1:75995682-75995701 | None:intergenic | 30.0% |
!!! | ATCGCAACTTTTTGAAACAT+AGG | + | chr1.1:75996375-75996394 | MS.gene93417:intron | 30.0% |
!!! | TCGCAACTTTTTGAAACATA+GGG | + | chr1.1:75996376-75996395 | MS.gene93417:intron | 30.0% |
AAAAGACTCCAGTTATACAC+GGG | + | chr1.1:75997442-75997461 | MS.gene93417:intron | 35.0% | |
ACTATTGCCAAGATAATGAG+AGG | + | chr1.1:75998303-75998322 | MS.gene93417:CDS | 35.0% | |
AGTTTGGATTATTGCTTTGC+AGG | + | chr1.1:75996723-75996742 | MS.gene93417:intron | 35.0% | |
ATCGCAACTTCTGTAAACAA+AGG | - | chr1.1:75996034-75996053 | None:intergenic | 35.0% | |
ATGCAAATCAAACTAGTACC+AGG | + | chr1.1:75996792-75996811 | MS.gene93417:CDS | 35.0% | |
CAAAAGACTCCAGTTATACA+CGG | + | chr1.1:75997441-75997460 | MS.gene93417:intron | 35.0% | |
GAAATAGACTTGGAGTTTCT+TGG | + | chr1.1:75996965-75996984 | MS.gene93417:CDS | 35.0% | |
GAGAAGAAAGGATTTATCTG+TGG | + | chr1.1:75997050-75997069 | MS.gene93417:CDS | 35.0% | |
GGCAATAGTCATAAATCATG+TGG | - | chr1.1:75998292-75998311 | None:intergenic | 35.0% | |
GTACCAACACTTTAGATCAA+AGG | + | chr1.1:75995922-75995941 | MS.gene93417:intron | 35.0% | |
GTCAGATGTGTTTACATGAT+TGG | - | chr1.1:75995798-75995817 | None:intergenic | 35.0% | |
GTGGCCAAGATAAAATTGAT+TGG | + | chr1.1:75998096-75998115 | MS.gene93417:CDS | 35.0% | |
GTTCCAAAACAATCTTCCTA+AGG | + | chr1.1:75998325-75998344 | MS.gene93417:CDS | 35.0% | |
GTTGAAGTAGGAGAAAGTTT+GGG | - | chr1.1:75997205-75997224 | None:intergenic | 35.0% | |
GTTTGGATTATTGCTTTGCA+GGG | + | chr1.1:75996724-75996743 | MS.gene93417:intron | 35.0% | |
TACAAAGAAGGTTGAGAAGT+TGG | + | chr1.1:75997613-75997632 | MS.gene93417:intron | 35.0% | |
TATAGAAACCATGCAGACAA+AGG | + | chr1.1:75997999-75998018 | MS.gene93417:CDS | 35.0% | |
TATTACCTTATGCAGGTTCA+TGG | + | chr1.1:75997953-75997972 | MS.gene93417:intron | 35.0% | |
TCCACAAGACAGAATAAGTA+TGG | - | chr1.1:75997096-75997115 | None:intergenic | 35.0% | |
TCCATACTTATTCTGTCTTG+TGG | + | chr1.1:75997092-75997111 | MS.gene93417:CDS | 35.0% | |
TCGCAACTTCTGTAAACAAA+GGG | - | chr1.1:75996033-75996052 | None:intergenic | 35.0% | |
TCTGTAATTACTATCAGGGT+GGG | - | chr1.1:75997833-75997852 | None:intergenic | 35.0% | |
TCTTATACAAAAACGGACAC+CGG | - | chr1.1:75996666-75996685 | None:intergenic | 35.0% | |
TGCAAATGAGGCAAAACATA+GGG | + | chr1.1:75996317-75996336 | MS.gene93417:intron | 35.0% | |
TGTTGAAGTAGGAGAAAGTT+TGG | - | chr1.1:75997206-75997225 | None:intergenic | 35.0% | |
TGTTGGTACTTAGATATTGG+AGG | - | chr1.1:75995911-75995930 | None:intergenic | 35.0% | |
TTCAACAGGTGACTTCAATA+AGG | + | chr1.1:75995751-75995770 | MS.gene93417:CDS | 35.0% | |
TTGAAGAATATATGGCTGTC+CGG | - | chr1.1:75996999-75997018 | None:intergenic | 35.0% | |
TTTGGATTATTGCTTTGCAG+GGG | + | chr1.1:75996725-75996744 | MS.gene93417:intron | 35.0% | |
! | AAATGACAAAAGTGCAAAGG+GGG | - | chr1.1:75996076-75996095 | None:intergenic | 35.0% |
! | TTTGGAACCTCTCATTATCT+TGG | - | chr1.1:75998313-75998332 | None:intergenic | 35.0% |
! | TTTTGCCTCATTTGCACTTT+TGG | - | chr1.1:75996313-75996332 | None:intergenic | 35.0% |
!! | AGCATTGACTTGGTCAAAAT+TGG | + | chr1.1:75996278-75996297 | MS.gene93417:intron | 35.0% |
!! | GTTGTGATTAGTCTTGTAGA+AGG | + | chr1.1:75997798-75997817 | MS.gene93417:intron | 35.0% |
!!! | CGCAACTTTTTGAAACATAG+GGG | + | chr1.1:75996377-75996396 | MS.gene93417:intron | 35.0% |
!!! | GCAACTTTTTGAAACATAGG+GGG | + | chr1.1:75996378-75996397 | MS.gene93417:intron | 35.0% |
AAGGAGTAGCATTTCCTAGA+TGG | + | chr1.1:75998018-75998037 | MS.gene93417:CDS | 40.0% | |
ACAAAGGAGGTGGTTCAAAT+GGG | + | chr1.1:75998256-75998275 | MS.gene93417:CDS | 40.0% | |
AGATGGATGAGATTCAAGCT+CGG | - | chr1.1:75996567-75996586 | None:intergenic | 40.0% | |
ATTGATGCTTGTGTGTGGAA+AGG | + | chr1.1:75998158-75998177 | MS.gene93417:CDS | 40.0% | |
CAAATGAGGCAAAACATAGG+GGG | + | chr1.1:75996319-75996338 | MS.gene93417:intron | 40.0% | |
CAACACTTTAGATCAAAGGC+GGG | + | chr1.1:75995926-75995945 | MS.gene93417:intron | 40.0% | |
CACTAACATCCATACAAAGG+AGG | + | chr1.1:75998243-75998262 | MS.gene93417:CDS | 40.0% | |
CATGTAAACACATCTGACGA+TGG | + | chr1.1:75995800-75995819 | MS.gene93417:CDS | 40.0% | |
CCAACACTTTAGATCAAAGG+CGG | + | chr1.1:75995925-75995944 | MS.gene93417:intron | 40.0% | |
CCAACTATCACCATTCCAAA+GGG | - | chr1.1:75998066-75998085 | None:intergenic | 40.0% | |
CCAGGAATTTGAATTCACAC+TGG | - | chr1.1:75996447-75996466 | None:intergenic | 40.0% | |
CCAGTGTGAATTCAAATTCC+TGG | + | chr1.1:75996444-75996463 | MS.gene93417:intron | 40.0% | |
CGCAACTTCTGTAAACAAAG+GGG | - | chr1.1:75996032-75996051 | None:intergenic | 40.0% | |
CTCTGTAATTACTATCAGGG+TGG | - | chr1.1:75997834-75997853 | None:intergenic | 40.0% | |
GATCGTGCATTCACACATTT+AGG | + | chr1.1:75996471-75996490 | MS.gene93417:intron | 40.0% | |
GATTCGACAATCGAGAAGAA+AGG | + | chr1.1:75997038-75997057 | MS.gene93417:CDS | 40.0% | |
GCAAATGAGGCAAAACATAG+GGG | + | chr1.1:75996318-75996337 | MS.gene93417:intron | 40.0% | |
GCAACTTCTGTAAACAAAGG+GGG | - | chr1.1:75996031-75996050 | None:intergenic | 40.0% | |
GCTCACTAACATCCATACAA+AGG | + | chr1.1:75998240-75998259 | MS.gene93417:CDS | 40.0% | |
GTGAATTCAAATTCCTGGCA+GGG | + | chr1.1:75996449-75996468 | MS.gene93417:intron | 40.0% | |
GTGCAAATGAGGCAAAACAT+AGG | + | chr1.1:75996316-75996335 | MS.gene93417:intron | 40.0% | |
TAACATCCATACAAAGGAGG+TGG | + | chr1.1:75998246-75998265 | MS.gene93417:CDS | 40.0% | |
TACAAAGGAGGTGGTTCAAA+TGG | + | chr1.1:75998255-75998274 | MS.gene93417:CDS | 40.0% | |
TGAGTCTAAAAGCAACCCTT+TGG | + | chr1.1:75998048-75998067 | MS.gene93417:CDS | 40.0% | |
TGTGAATTCAAATTCCTGGC+AGG | + | chr1.1:75996448-75996467 | MS.gene93417:intron | 40.0% | |
TTGATGCTTGTGTGTGGAAA+GGG | + | chr1.1:75998159-75998178 | MS.gene93417:CDS | 40.0% | |
TTGCTGCTCTACAAAACCTT+GGG | - | chr1.1:75998187-75998206 | None:intergenic | 40.0% | |
TTGGGAAGAGAACATTCCTT+AGG | - | chr1.1:75998344-75998363 | None:intergenic | 40.0% | |
TTTGAACCACCTCCTTTGTA+TGG | - | chr1.1:75998255-75998274 | None:intergenic | 40.0% | |
! | ACTTGGTCAAAATTGGCCTA+CGG | + | chr1.1:75996285-75996304 | MS.gene93417:intron | 40.0% |
! | ATGTATCGGTATCAGTGTCA+CGG | - | chr1.1:75995954-75995973 | None:intergenic | 40.0% |
! | CATAGTTGTTGATGAGTAGC+TGG | + | chr1.1:75997318-75997337 | MS.gene93417:intron | 40.0% |
! | CTAAAAGCAACCCTTTGGAA+TGG | + | chr1.1:75998053-75998072 | MS.gene93417:CDS | 40.0% |
! | GTTGAATTGGTTCCACCAAT+TGG | - | chr1.1:75998216-75998235 | None:intergenic | 40.0% |
!! | CCTTTGGAATGGTGATAGTT+GGG | + | chr1.1:75998064-75998083 | MS.gene93417:CDS | 40.0% |
!!! | AGGGTTGCTTTTAGACTCAT+TGG | - | chr1.1:75998047-75998066 | None:intergenic | 40.0% |
AAGGTTGAGAAGTTGGACGT+TGG | + | chr1.1:75997620-75997639 | MS.gene93417:intron | 45.0% | |
ATACAAAAACGGACACCGGA+TGG | - | chr1.1:75996662-75996681 | None:intergenic | 45.0% | |
ATCGACCATGAACCTGCATA+AGG | - | chr1.1:75997961-75997980 | None:intergenic | 45.0% | |
ATGCTACTCCTTTGTCTGCA+TGG | - | chr1.1:75998010-75998029 | None:intergenic | 45.0% | |
CAGCAAGTTCTACCAATTGG+TGG | + | chr1.1:75998201-75998220 | MS.gene93417:CDS | 45.0% | |
CATATGGACCCGTGTATAAC+TGG | - | chr1.1:75997453-75997472 | None:intergenic | 45.0% | |
CCCAACTATCACCATTCCAA+AGG | - | chr1.1:75998067-75998086 | None:intergenic | 45.0% | |
CTTGCTGCTCTACAAAACCT+TGG | - | chr1.1:75998188-75998207 | None:intergenic | 45.0% | |
GAGCAGCAAGTTCTACCAAT+TGG | + | chr1.1:75998198-75998217 | MS.gene93417:CDS | 45.0% | |
GAGTTTCTTGGAAACGTCTC+CGG | + | chr1.1:75996977-75996996 | MS.gene93417:CDS | 45.0% | |
TCCATCTGATCCTGATCAAG+TGG | + | chr1.1:75996580-75996599 | MS.gene93417:intron | 45.0% | |
TCTCTTGACTGCAAGAGATC+CGG | + | chr1.1:75996634-75996653 | MS.gene93417:intron | 45.0% | |
TGCAAAGGGGGCAAAACATA+GGG | - | chr1.1:75996064-75996083 | None:intergenic | 45.0% | |
TTGAGAAGTTGGACGTTGGT+AGG | + | chr1.1:75997624-75997643 | MS.gene93417:intron | 45.0% | |
! | AGACTCATTGGTTGCCATCT+AGG | - | chr1.1:75998035-75998054 | None:intergenic | 45.0% |
! | CCGCCTTTGATCTAAAGTGT+TGG | - | chr1.1:75995928-75995947 | None:intergenic | 45.0% |
! | CTTGGTCAAAATTGGCCTAC+GGG | + | chr1.1:75996286-75996305 | MS.gene93417:intron | 45.0% |
! | TGTATCGGTATCAGTGTCAC+GGG | - | chr1.1:75995953-75995972 | None:intergenic | 45.0% |
! | TTGGTCAAAATTGGCCTACG+GGG | + | chr1.1:75996287-75996306 | MS.gene93417:intron | 45.0% |
!! | CCCTTTGGAATGGTGATAGT+TGG | + | chr1.1:75998063-75998082 | MS.gene93417:CDS | 45.0% |
AGATCCTGCATTCGCGCAAT+CGG | - | chr1.1:75996617-75996636 | None:intergenic | 50.0% | |
CAAAGGGGGCAAAACATAGG+GGG | - | chr1.1:75996062-75996081 | None:intergenic | 50.0% | |
CTAGTACCAGGTGATTCTGC+AGG | + | chr1.1:75996804-75996823 | MS.gene93417:CDS | 50.0% | |
GATAGTTGGGCAACAAGAGG+TGG | + | chr1.1:75998077-75998096 | MS.gene93417:CDS | 50.0% | |
GATTATTGCTTTGCAGGGGC+TGG | + | chr1.1:75996729-75996748 | MS.gene93417:intron | 50.0% | |
GCAAAGGGGGCAAAACATAG+GGG | - | chr1.1:75996063-75996082 | None:intergenic | 50.0% | |
GCCACTTGATCAGGATCAGA+TGG | - | chr1.1:75996584-75996603 | None:intergenic | 50.0% | |
GGTGATAGTTGGGCAACAAG+AGG | + | chr1.1:75998074-75998093 | MS.gene93417:CDS | 50.0% | |
GTGCAAAGGGGGCAAAACAT+AGG | - | chr1.1:75996065-75996084 | None:intergenic | 50.0% | |
TCTGTGGTTCGATCCCACAA+AGG | + | chr1.1:75997066-75997085 | MS.gene93417:CDS | 50.0% | |
TGACCAAGTCAATGCTGACG+TGG | + | chr1.1:75996096-75996115 | MS.gene93417:intron | 50.0% | |
TGACCAAGTCAATGCTGACG+TGG | - | chr1.1:75996115-75996096 | None:intergenic | 50.0% | |
TGATTCTGCAGGCACAGTAC+TGG | + | chr1.1:75996815-75996834 | MS.gene93417:CDS | 50.0% | |
! | ACATTGGTGGCCACTTGATC+AGG | - | chr1.1:75996593-75996612 | None:intergenic | 50.0% |
! | ATTTGCACTTTTGGCCCCGT+AGG | - | chr1.1:75996304-75996323 | None:intergenic | 50.0% |
! | GGAGGTGGTTCAAATGGGTT+AGG | + | chr1.1:75998261-75998280 | MS.gene93417:CDS | 50.0% |
ACTGTGCCTGCAGAATCACC+TGG | - | chr1.1:75996813-75996832 | None:intergenic | 55.0% | |
CATTCGCGCAATCGGGACAT+TGG | - | chr1.1:75996609-75996628 | None:intergenic | 55.0% | |
GATCCTGCATTCGCGCAATC+GGG | - | chr1.1:75996616-75996635 | None:intergenic | 55.0% | |
GTGTGTGGAAAGGGAACCCA+AGG | + | chr1.1:75998168-75998187 | MS.gene93417:CDS | 55.0% | |
! | CGGGGCCAAAAGTGCAAATG+AGG | + | chr1.1:75996305-75996324 | MS.gene93417:intron | 55.0% |
AAACGGACACCGGATGGAGC+CGG | - | chr1.1:75996656-75996675 | None:intergenic | 60.0% | |
GCAAGAGATCCGGCTCCATC+CGG | + | chr1.1:75996644-75996663 | MS.gene93417:intron | 60.0% | |
GTGAATGCACGATCCCTGCC+AGG | - | chr1.1:75996465-75996484 | None:intergenic | 60.0% | |
TCGCGCAATCGGGACATTGG+TGG | - | chr1.1:75996606-75996625 | None:intergenic | 60.0% | |
TGTCCCGATTGCGCGAATGC+AGG | + | chr1.1:75996610-75996629 | MS.gene93417:intron | 60.0% | |
!! | GCGCCACGTCAGCATTGACT+TGG | + | chr1.1:75996268-75996287 | MS.gene93417:intron | 60.0% |
!! | GCGCCACGTCAGCATTGACT+TGG | - | chr1.1:75996287-75996268 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 75995668 | 75998370 | 75995668 | ID=MS.gene93417 |
chr1.1 | mRNA | 75995668 | 75998370 | 75995668 | ID=MS.gene93417.t1;Parent=MS.gene93417 |
chr1.1 | exon | 75995668 | 75995857 | 75995668 | ID=MS.gene93417.t1.exon1;Parent=MS.gene93417.t1 |
chr1.1 | CDS | 75995668 | 75995857 | 75995668 | ID=cds.MS.gene93417.t1;Parent=MS.gene93417.t1 |
chr1.1 | exon | 75996745 | 75996845 | 75996745 | ID=MS.gene93417.t1.exon2;Parent=MS.gene93417.t1 |
chr1.1 | CDS | 75996745 | 75996845 | 75996745 | ID=cds.MS.gene93417.t1;Parent=MS.gene93417.t1 |
chr1.1 | exon | 75996938 | 75997131 | 75996938 | ID=MS.gene93417.t1.exon3;Parent=MS.gene93417.t1 |
chr1.1 | CDS | 75996938 | 75997131 | 75996938 | ID=cds.MS.gene93417.t1;Parent=MS.gene93417.t1 |
chr1.1 | exon | 75997968 | 75998370 | 75997968 | ID=MS.gene93417.t1.exon4;Parent=MS.gene93417.t1 |
chr1.1 | CDS | 75997968 | 75998370 | 75997968 | ID=cds.MS.gene93417.t1;Parent=MS.gene93417.t1 |
Gene Sequence |
Protein sequence |