Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22556.t1 | RHN53703.1 | 95.7 | 230 | 9 | 1 | 4 | 233 | 51 | 279 | 2.30E-121 | 444.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22556.t1 | G7KG69 | 95.7 | 230 | 9 | 1 | 4 | 233 | 1 | 229 | 1.7e-121 | 444.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052224 | MS.gene22556 | -0.868414 | 6.65E-66 | -1.69E-46 |
| MS.gene053217 | MS.gene22556 | 0.807437 | 5.06E-50 | -1.69E-46 |
| MS.gene053401 | MS.gene22556 | 0.843093 | 1.73E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22556.t1 | MTR_5g011800 | 95.652 | 230 | 9 | 1 | 4 | 233 | 1 | 229 | 2.77e-163 | 450 |
| MS.gene22556.t1 | MTR_5g011820 | 89.700 | 233 | 23 | 1 | 1 | 233 | 1 | 232 | 4.63e-154 | 427 |
| MS.gene22556.t1 | MTR_4g102220 | 58.475 | 236 | 81 | 6 | 4 | 233 | 1 | 225 | 2.78e-79 | 238 |
| MS.gene22556.t1 | MTR_4g024370 | 50.633 | 237 | 105 | 5 | 4 | 233 | 1 | 232 | 1.35e-73 | 223 |
| MS.gene22556.t1 | MTR_4g024370 | 50.633 | 237 | 105 | 5 | 4 | 233 | 1 | 232 | 1.35e-73 | 223 |
| MS.gene22556.t1 | MTR_6g060390 | 29.565 | 230 | 136 | 9 | 8 | 232 | 4 | 212 | 4.05e-23 | 93.6 |
| MS.gene22556.t1 | MTR_6g060440 | 30.000 | 230 | 133 | 10 | 8 | 232 | 4 | 210 | 2.93e-22 | 91.3 |
| MS.gene22556.t1 | MTR_1g076800 | 26.201 | 229 | 146 | 8 | 7 | 232 | 3 | 211 | 1.51e-19 | 84.0 |
| MS.gene22556.t1 | MTR_7g117380 | 27.948 | 229 | 151 | 7 | 8 | 232 | 3 | 221 | 1.24e-18 | 81.6 |
| MS.gene22556.t1 | MTR_4g023950 | 28.194 | 227 | 138 | 8 | 8 | 232 | 4 | 207 | 1.25e-14 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22556.t1 | AT2G45360 | 51.948 | 231 | 94 | 5 | 4 | 233 | 1 | 215 | 3.25e-72 | 219 |
| MS.gene22556.t1 | AT3G60780 | 49.785 | 233 | 99 | 6 | 4 | 233 | 1 | 218 | 5.50e-69 | 211 |
| MS.gene22556.t1 | AT1G62840 | 46.888 | 241 | 100 | 8 | 4 | 233 | 1 | 224 | 2.52e-54 | 174 |
| MS.gene22556.t1 | AT1G12320 | 42.857 | 231 | 104 | 7 | 4 | 229 | 1 | 208 | 6.11e-45 | 149 |
Find 68 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGGGATGTTCACTTTATT+AGG | 0.233385 | 5.2:-4370034 | MS.gene22556:CDS |
| TTTATTTCTAAGATGGATTC+TGG | 0.260989 | 5.2:-4370245 | MS.gene22556:CDS |
| TATGAGTTAGTTGCTCTCTC+TGG | 0.291619 | 5.2:+4370680 | None:intergenic |
| TTTGATTGGAATAGATTTCT+TGG | 0.340143 | 5.2:-4370360 | MS.gene22556:CDS |
| ATGGCGGAGCGTGGTGGCGC+GGG | 0.351116 | 5.2:-4370216 | MS.gene22556:CDS |
| AGATGGATTCTGGTTATATA+TGG | 0.373750 | 5.2:-4370235 | MS.gene22556:CDS |
| TGGTATGTCACCGGAAGTTT+TGG | 0.381944 | 5.2:-4370411 | MS.gene22556:CDS |
| ATTTCTTGGTTGTTGATTCT+CGG | 0.396616 | 5.2:-4370346 | MS.gene22556:CDS |
| TGAAAGACATGAAACTTGTT+TGG | 0.407611 | 5.2:-4370706 | MS.gene22556:CDS |
| TGTTCGGTCAGTATTTCTTC+CGG | 0.416161 | 5.2:-4370180 | MS.gene22556:CDS |
| GAAGTGATGGATGGTTTGAT+TGG | 0.429509 | 5.2:-4370374 | MS.gene22556:CDS |
| ATGAGTTAGTTGCTCTCTCT+GGG | 0.435811 | 5.2:+4370681 | None:intergenic |
| AAGCATGTTGATCAACGATC+AGG | 0.439670 | 5.2:-4370053 | MS.gene22556:CDS |
| TCCGATCTTGACCGTTCATC+AGG | 0.440907 | 5.2:+4370458 | None:intergenic |
| AGAATCCGGTGCGGCGGAGC+TGG | 0.456364 | 5.2:-4370612 | MS.gene22556:CDS |
| GGCGGAGCTGGTATCCTCTA+TGG | 0.456798 | 5.2:-4370600 | MS.gene22556:CDS |
| TGGATAAACCAACACTCGTT+GGG | 0.457594 | 5.2:+4370522 | None:intergenic |
| GGGGATCACGACGACTTGTT+CGG | 0.470863 | 5.2:-4370196 | MS.gene22556:CDS |
| ACCTGTGTGACCGCTTGCTA+TGG | 0.473046 | 5.2:+4370502 | None:intergenic |
| AGTATTTCTTCCGGTGGGGA+AGG | 0.473923 | 5.2:-4370171 | MS.gene22556:CDS |
| TTCTCTAGGAAGGTGATTGA+TGG | 0.483897 | 5.2:+4370631 | None:intergenic |
| TGTTACGGCGATGAAGCATA+AGG | 0.490118 | 5.2:-4370102 | MS.gene22556:CDS |
| AATCACCTTCCTAGAGAATC+CGG | 0.490375 | 5.2:-4370626 | MS.gene22556:CDS |
| AAGGTGATTGATGGTAGTTA+TGG | 0.490442 | 5.2:+4370640 | None:intergenic |
| GACGTGCTGTTCATAATAGA+TGG | 0.491292 | 5.2:-4370079 | MS.gene22556:CDS |
| CGGTCAGTATTTCTTCCGGT+GGG | 0.491351 | 5.2:-4370176 | MS.gene22556:CDS |
| GGTTCTCCTACCAAAACTTC+CGG | 0.492682 | 5.2:+4370401 | None:intergenic |
| TGGCGGAGCGTGGTGGCGCG+GGG | 0.493800 | 5.2:-4370215 | MS.gene22556:CDS |
| TTAGCAAAGTTGAGTGGTAA+AGG | 0.497478 | 5.2:-4370296 | MS.gene22556:CDS |
| TATGGCGGAGCGTGGTGGCG+CGG | 0.506489 | 5.2:-4370217 | MS.gene22556:CDS |
| CTGGTATCCTCTATGGCAGC+AGG | 0.510352 | 5.2:-4370593 | MS.gene22556:CDS |
| TGGTGGTGACAACTCTGTTA+CGG | 0.515438 | 5.2:-4370117 | MS.gene22556:CDS |
| AAACCATCCATCACTTCCTC+CGG | 0.520767 | 5.2:+4370380 | None:intergenic |
| AACAGAGTTGTCACCACCAC+CGG | 0.522950 | 5.2:+4370121 | None:intergenic |
| GGATACCAGCTCCGCCGCAC+CGG | 0.538075 | 5.2:+4370607 | None:intergenic |
| GTTACGGCGATGAAGCATAA+GGG | 0.543192 | 5.2:-4370101 | MS.gene22556:CDS |
| AGGAGAACCGGAGGAAGTGA+TGG | 0.549491 | 5.2:-4370387 | MS.gene22556:CDS |
| TCCTGATGAACGGTCAAGAT+CGG | 0.549497 | 5.2:-4370459 | MS.gene22556:CDS |
| GGTGGGGAAGGGAATTCATA+TGG | 0.556013 | 5.2:-4370159 | MS.gene22556:CDS |
| ATGGATAAACCAACACTCGT+TGG | 0.556717 | 5.2:+4370521 | None:intergenic |
| TCGGTCAGTATTTCTTCCGG+TGG | 0.561365 | 5.2:-4370177 | MS.gene22556:CDS |
| GTATTTCTTCCGGTGGGGAA+GGG | 0.563160 | 5.2:-4370170 | MS.gene22556:CDS |
| AGCATGTTGATCAACGATCA+GGG | 0.563826 | 5.2:-4370052 | MS.gene22556:CDS |
| TCCTAGAGAATCCGGTGCGG+CGG | 0.565345 | 5.2:-4370618 | MS.gene22556:CDS |
| GGAGTTATCCCAACGAGTGT+TGG | 0.567790 | 5.2:-4370530 | MS.gene22556:CDS |
| AGGATGGAACGCTCAGCTGA+TGG | 0.575592 | 5.2:-4370573 | MS.gene22556:CDS |
| GTTCCATCCTGCTGCCATAG+AGG | 0.581085 | 5.2:+4370586 | None:intergenic |
| ATATGAATTCCCTTCCCCAC+CGG | 0.588515 | 5.2:+4370161 | None:intergenic |
| TCCGCCGCACCGGATTCTCT+AGG | 0.590144 | 5.2:+4370617 | None:intergenic |
| CTCAGCTGATGGTAGAAACA+TGG | 0.591953 | 5.2:-4370562 | MS.gene22556:CDS |
| GGGAGAAGCTGGTATGTCAC+CGG | 0.594972 | 5.2:-4370420 | MS.gene22556:CDS |
| TTGAGGTTAGCAAAGTTGAG+TGG | 0.609267 | 5.2:-4370302 | MS.gene22556:CDS |
| TTATATATGGCGGAGCGTGG+TGG | 0.612287 | 5.2:-4370222 | MS.gene22556:CDS |
| CCGCACCGGATTCTCTAGGA+AGG | 0.614758 | 5.2:+4370621 | None:intergenic |
| GAACCGGAGGAAGTGATGGA+TGG | 0.618455 | 5.2:-4370383 | MS.gene22556:CDS |
| TCCATAGCAAGCGGTCACAC+AGG | 0.622700 | 5.2:-4370503 | MS.gene22556:CDS |
| GGTCAGTATTTCTTCCGGTG+GGG | 0.623177 | 5.2:-4370175 | MS.gene22556:CDS |
| TGGTTATATATGGCGGAGCG+TGG | 0.623341 | 5.2:-4370225 | MS.gene22556:CDS |
| TATCCTCTATGGCAGCAGGA+TGG | 0.630751 | 5.2:-4370589 | MS.gene22556:CDS |
| TGTGCATAGTTCCTGATGAA+CGG | 0.633781 | 5.2:-4370469 | MS.gene22556:CDS |
| ATAGCAAGCGGTCACACAGG+TGG | 0.636263 | 5.2:-4370500 | MS.gene22556:CDS |
| TGGATTCTGGTTATATATGG+CGG | 0.643639 | 5.2:-4370232 | MS.gene22556:CDS |
| GCATGTTGATCAACGATCAG+GGG | 0.659538 | 5.2:-4370051 | MS.gene22556:CDS |
| GTTGGTTTATCCATAGCAAG+CGG | 0.671936 | 5.2:-4370512 | MS.gene22556:CDS |
| ATGGTAGAAACATGGTCACA+CGG | 0.678425 | 5.2:-4370554 | MS.gene22556:CDS |
| TGAGTTAGTTGCTCTCTCTG+GGG | 0.683268 | 5.2:+4370682 | None:intergenic |
| CCTTCCTAGAGAATCCGGTG+CGG | 0.793946 | 5.2:-4370621 | MS.gene22556:CDS |
| GTAGAAACATGGTCACACGG+CGG | 0.829401 | 5.2:-4370551 | MS.gene22556:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGCTAATTTTATTTCTAAGA+TGG | - | chr5.2:4370483-4370502 | MS.gene22556:CDS | 20.0% |
| ! | TTTGATTGGAATAGATTTCT+TGG | - | chr5.2:4370375-4370394 | MS.gene22556:CDS | 25.0% |
| !!! | TTTATTTCTAAGATGGATTC+TGG | - | chr5.2:4370490-4370509 | MS.gene22556:CDS | 25.0% |
| ! | AATTCATATGGCACACTTTT+CGG | - | chr5.2:4370588-4370607 | MS.gene22556:CDS | 30.0% |
| ! | AGATGGATTCTGGTTATATA+TGG | - | chr5.2:4370500-4370519 | MS.gene22556:CDS | 30.0% |
| ! | TGAAAGACATGAAACTTGTT+TGG | - | chr5.2:4370029-4370048 | MS.gene22556:CDS | 30.0% |
| !! | ATTTCTTGGTTGTTGATTCT+CGG | - | chr5.2:4370389-4370408 | MS.gene22556:CDS | 30.0% |
| !!! | AAGATTTTACAAGAGTGTTG+AGG | - | chr5.2:4370416-4370435 | MS.gene22556:CDS | 30.0% |
| ATCGGAGTATGCAAAAAACA+TGG | - | chr5.2:4370294-4370313 | MS.gene22556:CDS | 35.0% | |
| TCGGAGTATGCAAAAAACAT+GGG | - | chr5.2:4370295-4370314 | MS.gene22556:CDS | 35.0% | |
| TTAGCAAAGTTGAGTGGTAA+AGG | - | chr5.2:4370439-4370458 | MS.gene22556:CDS | 35.0% | |
| ! | AAGGTGATTGATGGTAGTTA+TGG | + | chr5.2:4370098-4370117 | None:intergenic | 35.0% |
| ! | TGGATTCTGGTTATATATGG+CGG | - | chr5.2:4370503-4370522 | MS.gene22556:CDS | 35.0% |
| AAGCATGTTGATCAACGATC+AGG | - | chr5.2:4370682-4370701 | MS.gene22556:CDS | 40.0% | |
| AATCACCTTCCTAGAGAATC+CGG | - | chr5.2:4370109-4370128 | MS.gene22556:CDS | 40.0% | |
| AGCATGTTGATCAACGATCA+GGG | - | chr5.2:4370683-4370702 | MS.gene22556:CDS | 40.0% | |
| ATGAGTTAGTTGCTCTCTCT+GGG | + | chr5.2:4370057-4370076 | None:intergenic | 40.0% | |
| ATGGATAAACCAACACTCGT+TGG | + | chr5.2:4370217-4370236 | None:intergenic | 40.0% | |
| ATGGTAGAAACATGGTCACA+CGG | - | chr5.2:4370181-4370200 | MS.gene22556:CDS | 40.0% | |
| CAGGGGATGTTCACTTTATT+AGG | - | chr5.2:4370701-4370720 | MS.gene22556:CDS | 40.0% | |
| TATGAGTTAGTTGCTCTCTC+TGG | + | chr5.2:4370058-4370077 | None:intergenic | 40.0% | |
| TGGATAAACCAACACTCGTT+GGG | + | chr5.2:4370216-4370235 | None:intergenic | 40.0% | |
| TGTGCATAGTTCCTGATGAA+CGG | - | chr5.2:4370266-4370285 | MS.gene22556:CDS | 40.0% | |
| TGTTCGGTCAGTATTTCTTC+CGG | - | chr5.2:4370555-4370574 | MS.gene22556:CDS | 40.0% | |
| TTGAGGTTAGCAAAGTTGAG+TGG | - | chr5.2:4370433-4370452 | MS.gene22556:CDS | 40.0% | |
| ! | GACGTGCTGTTCATAATAGA+TGG | - | chr5.2:4370656-4370675 | MS.gene22556:CDS | 40.0% |
| ! | GTTGGTTTATCCATAGCAAG+CGG | - | chr5.2:4370223-4370242 | MS.gene22556:CDS | 40.0% |
| ! | TTCTCTAGGAAGGTGATTGA+TGG | + | chr5.2:4370107-4370126 | None:intergenic | 40.0% |
| !! | GAAGTGATGGATGGTTTGAT+TGG | - | chr5.2:4370361-4370380 | MS.gene22556:CDS | 40.0% |
| AAACCATCCATCACTTCCTC+CGG | + | chr5.2:4370358-4370377 | None:intergenic | 45.0% | |
| ATATGAATTCCCTTCCCCAC+CGG | + | chr5.2:4370577-4370596 | None:intergenic | 45.0% | |
| CTCAGCTGATGGTAGAAACA+TGG | - | chr5.2:4370173-4370192 | MS.gene22556:CDS | 45.0% | |
| GCAAAAAACATGGGAGAAGC+TGG | - | chr5.2:4370304-4370323 | MS.gene22556:CDS | 45.0% | |
| GCATGTTGATCAACGATCAG+GGG | - | chr5.2:4370684-4370703 | MS.gene22556:CDS | 45.0% | |
| GGTTCTCCTACCAAAACTTC+CGG | + | chr5.2:4370337-4370356 | None:intergenic | 45.0% | |
| GTTACGGCGATGAAGCATAA+GGG | - | chr5.2:4370634-4370653 | MS.gene22556:CDS | 45.0% | |
| TCCTGATGAACGGTCAAGAT+CGG | - | chr5.2:4370276-4370295 | MS.gene22556:CDS | 45.0% | |
| TGAGTTAGTTGCTCTCTCTG+GGG | + | chr5.2:4370056-4370075 | None:intergenic | 45.0% | |
| TGTTACGGCGATGAAGCATA+AGG | - | chr5.2:4370633-4370652 | MS.gene22556:CDS | 45.0% | |
| ! | TGGTATGTCACCGGAAGTTT+TGG | - | chr5.2:4370324-4370343 | MS.gene22556:CDS | 45.0% |
| ! | TGGTGGTGACAACTCTGTTA+CGG | - | chr5.2:4370618-4370637 | MS.gene22556:CDS | 45.0% |
| !! | ATGTCACCGGAAGTTTTGGT+AGG | - | chr5.2:4370328-4370347 | MS.gene22556:CDS | 45.0% |
| !! | GGAAGTTTTGGTAGGAGAAC+CGG | - | chr5.2:4370336-4370355 | MS.gene22556:CDS | 45.0% |
| AACAGAGTTGTCACCACCAC+CGG | + | chr5.2:4370617-4370636 | None:intergenic | 50.0% | |
| AGTATTTCTTCCGGTGGGGA+AGG | - | chr5.2:4370564-4370583 | MS.gene22556:CDS | 50.0% | |
| CGGTCAGTATTTCTTCCGGT+GGG | - | chr5.2:4370559-4370578 | MS.gene22556:CDS | 50.0% | |
| GGAGTTATCCCAACGAGTGT+TGG | - | chr5.2:4370205-4370224 | MS.gene22556:CDS | 50.0% | |
| GGTCAGTATTTCTTCCGGTG+GGG | - | chr5.2:4370560-4370579 | MS.gene22556:CDS | 50.0% | |
| GGTGGGGAAGGGAATTCATA+TGG | - | chr5.2:4370576-4370595 | MS.gene22556:CDS | 50.0% | |
| GTAGAAACATGGTCACACGG+CGG | - | chr5.2:4370184-4370203 | MS.gene22556:CDS | 50.0% | |
| GTATTTCTTCCGGTGGGGAA+GGG | - | chr5.2:4370565-4370584 | MS.gene22556:CDS | 50.0% | |
| TATCCTCTATGGCAGCAGGA+TGG | - | chr5.2:4370146-4370165 | MS.gene22556:CDS | 50.0% | |
| TCCGATCTTGACCGTTCATC+AGG | + | chr5.2:4370280-4370299 | None:intergenic | 50.0% | |
| TCGGTCAGTATTTCTTCCGG+TGG | - | chr5.2:4370558-4370577 | MS.gene22556:CDS | 50.0% | |
| ! | TGGTTATATATGGCGGAGCG+TGG | - | chr5.2:4370510-4370529 | MS.gene22556:CDS | 50.0% |
| ! | TTATATATGGCGGAGCGTGG+TGG | - | chr5.2:4370513-4370532 | MS.gene22556:CDS | 50.0% |
| !! | AGTTTTGGTAGGAGAACCGG+AGG | - | chr5.2:4370339-4370358 | MS.gene22556:CDS | 50.0% |
| AGGAGAACCGGAGGAAGTGA+TGG | - | chr5.2:4370348-4370367 | MS.gene22556:CDS | 55.0% | |
| AGGATGGAACGCTCAGCTGA+TGG | - | chr5.2:4370162-4370181 | MS.gene22556:CDS | 55.0% | |
| ATAGCAAGCGGTCACACAGG+TGG | - | chr5.2:4370235-4370254 | MS.gene22556:CDS | 55.0% | |
| CCTTCCTAGAGAATCCGGTG+CGG | - | chr5.2:4370114-4370133 | MS.gene22556:CDS | 55.0% | |
| CTGGTATCCTCTATGGCAGC+AGG | - | chr5.2:4370142-4370161 | MS.gene22556:CDS | 55.0% | |
| GGGAGAAGCTGGTATGTCAC+CGG | - | chr5.2:4370315-4370334 | MS.gene22556:CDS | 55.0% | |
| GTTCCATCCTGCTGCCATAG+AGG | + | chr5.2:4370152-4370171 | None:intergenic | 55.0% | |
| TCCATAGCAAGCGGTCACAC+AGG | - | chr5.2:4370232-4370251 | MS.gene22556:CDS | 55.0% | |
| ! | ACCTGTGTGACCGCTTGCTA+TGG | + | chr5.2:4370236-4370255 | None:intergenic | 55.0% |
| ! | ATGGCACACTTTTCGGCTGC+CGG | - | chr5.2:4370595-4370614 | MS.gene22556:CDS | 55.0% |
| ! | GAACCGGAGGAAGTGATGGA+TGG | - | chr5.2:4370352-4370371 | MS.gene22556:CDS | 55.0% |
| ! | GGGGATCACGACGACTTGTT+CGG | - | chr5.2:4370539-4370558 | MS.gene22556:CDS | 55.0% |
| GGCGGAGCTGGTATCCTCTA+TGG | - | chr5.2:4370135-4370154 | MS.gene22556:CDS | 60.0% | |
| TCCTAGAGAATCCGGTGCGG+CGG | - | chr5.2:4370117-4370136 | MS.gene22556:CDS | 60.0% | |
| ! | CCGCACCGGATTCTCTAGGA+AGG | + | chr5.2:4370117-4370136 | None:intergenic | 60.0% |
| TCCGCCGCACCGGATTCTCT+AGG | + | chr5.2:4370121-4370140 | None:intergenic | 65.0% | |
| ! | CACTTTTCGGCTGCCGGTGG+TGG | - | chr5.2:4370601-4370620 | MS.gene22556:CDS | 65.0% |
| ! | GCACACTTTTCGGCTGCCGG+TGG | - | chr5.2:4370598-4370617 | MS.gene22556:CDS | 65.0% |
| AGAATCCGGTGCGGCGGAGC+TGG | - | chr5.2:4370123-4370142 | MS.gene22556:CDS | 70.0% | |
| GGATACCAGCTCCGCCGCAC+CGG | + | chr5.2:4370131-4370150 | None:intergenic | 70.0% | |
| ! | TATGGCGGAGCGTGGTGGCG+CGG | - | chr5.2:4370518-4370537 | MS.gene22556:CDS | 70.0% |
| ! | ATGGCGGAGCGTGGTGGCGC+GGG | - | chr5.2:4370519-4370538 | MS.gene22556:CDS | 75.0% |
| !! | TGGCGGAGCGTGGTGGCGCG+GGG | - | chr5.2:4370520-4370539 | MS.gene22556:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 4370028 | 4370729 | 4370028 | ID=MS.gene22556 |
| chr5.2 | mRNA | 4370028 | 4370729 | 4370028 | ID=MS.gene22556.t1;Parent=MS.gene22556 |
| chr5.2 | exon | 4370028 | 4370729 | 4370028 | ID=MS.gene22556.t1.exon1;Parent=MS.gene22556.t1 |
| chr5.2 | CDS | 4370028 | 4370729 | 4370028 | ID=cds.MS.gene22556.t1;Parent=MS.gene22556.t1 |
| Gene Sequence |
| Protein sequence |
