Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052224.t1 | XP_003601987.1 | 99.6 | 510 | 2 | 0 | 1 | 510 | 1 | 510 | 3.10E-288 | 1000.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052224.t1 | Q9SSV4 | 91.8 | 510 | 42 | 0 | 1 | 510 | 1 | 510 | 1.8e-276 | 952.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052224.t1 | G7J4B5 | 99.6 | 510 | 2 | 0 | 1 | 510 | 1 | 510 | 2.3e-288 | 1000.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050702 | MS.gene052224 | 0.827066 | 1.92E-54 | -1.69E-46 |
| MS.gene052224 | MS.gene053401 | -0.898274 | 6.23E-77 | -1.69E-46 |
| MS.gene052224 | MS.gene053509 | -0.808666 | 2.77E-50 | -1.69E-46 |
| MS.gene052224 | MS.gene061735 | -0.843055 | 1.77E-58 | -1.69E-46 |
| MS.gene052224 | MS.gene06736 | 0.833167 | 6.23E-56 | -1.69E-46 |
| MS.gene052224 | MS.gene06954 | 0.807161 | 5.79E-50 | -1.69E-46 |
| MS.gene052224 | MS.gene070271 | -0.813871 | 2.06E-51 | -1.69E-46 |
| MS.gene052224 | MS.gene072213 | -0.806324 | 8.69E-50 | -1.69E-46 |
| MS.gene052224 | MS.gene09931 | -0.876614 | 1.21E-68 | -1.69E-46 |
| MS.gene052224 | MS.gene20747 | 0.810322 | 1.22E-50 | -1.69E-46 |
| MS.gene052224 | MS.gene22556 | -0.868414 | 6.65E-66 | -1.69E-46 |
| MS.gene052224 | MS.gene22755 | 0.801183 | 1.02E-48 | -1.69E-46 |
| MS.gene052224 | MS.gene23262 | -0.866901 | 2.03E-65 | -1.69E-46 |
| MS.gene052224 | MS.gene23264 | -0.840504 | 8.36E-58 | -1.69E-46 |
| MS.gene052224 | MS.gene26560 | -0.844623 | 6.74E-59 | -1.69E-46 |
| MS.gene052224 | MS.gene29697 | -0.808589 | 2.88E-50 | -1.69E-46 |
| MS.gene052224 | MS.gene31670 | 0.824688 | 7.05E-54 | -1.69E-46 |
| MS.gene052224 | MS.gene32838 | -0.835046 | 2.11E-56 | -1.69E-46 |
| MS.gene052224 | MS.gene37446 | -0.832997 | 6.87E-56 | -1.69E-46 |
| MS.gene052224 | MS.gene39121 | 0.807627 | 4.61E-50 | -1.69E-46 |
| MS.gene052224 | MS.gene39214 | -0.859432 | 4.15E-63 | -1.69E-46 |
| MS.gene052224 | MS.gene39217 | -0.82014 | 8.03E-53 | -1.69E-46 |
| MS.gene052224 | MS.gene45192 | 0.865147 | 7.29E-65 | -1.69E-46 |
| MS.gene052224 | MS.gene45593 | -0.849233 | 3.69E-60 | -1.69E-46 |
| MS.gene052224 | MS.gene45595 | -0.853449 | 2.37E-61 | -1.69E-46 |
| MS.gene052224 | MS.gene45666 | -0.829286 | 5.61E-55 | -1.69E-46 |
| MS.gene052224 | MS.gene46499 | -0.853192 | 2.81E-61 | -1.69E-46 |
| MS.gene052224 | MS.gene47692 | -0.822905 | 1.84E-53 | -1.69E-46 |
| MS.gene052224 | MS.gene50085 | -0.872091 | 4.15E-67 | -1.69E-46 |
| MS.gene052224 | MS.gene54605 | -0.821576 | 3.75E-53 | -1.69E-46 |
| MS.gene052224 | MS.gene56536 | 0.84748 | 1.13E-59 | -1.69E-46 |
| MS.gene052224 | MS.gene56670 | -0.809529 | 1.81E-50 | -1.69E-46 |
| MS.gene052224 | MS.gene56714 | 0.820194 | 7.80E-53 | -1.69E-46 |
| MS.gene052224 | MS.gene58413 | -0.818256 | 2.16E-52 | -1.69E-46 |
| MS.gene052224 | MS.gene58556 | 0.839811 | 1.27E-57 | -1.69E-46 |
| MS.gene052224 | MS.gene59440 | 0.854693 | 1.04E-61 | -1.69E-46 |
| MS.gene052224 | MS.gene64738 | 0.867872 | 9.94E-66 | -1.69E-46 |
| MS.gene052224 | MS.gene65495 | -0.894415 | 2.52E-75 | -1.69E-46 |
| MS.gene052224 | MS.gene65946 | -0.897922 | 8.78E-77 | -1.69E-46 |
| MS.gene052224 | MS.gene68034 | 0.827311 | 1.68E-54 | -1.69E-46 |
| MS.gene052224 | MS.gene75459 | 0.889761 | 1.81E-73 | -1.69E-46 |
| MS.gene052224 | MS.gene76100 | -0.808708 | 2.71E-50 | -1.69E-46 |
| MS.gene052224 | MS.gene79233 | 0.880213 | 6.60E-70 | -1.69E-46 |
| MS.gene052224 | MS.gene79881 | -0.82834 | 9.49E-55 | -1.69E-46 |
| MS.gene052224 | MS.gene81017 | -0.813652 | 2.30E-51 | -1.69E-46 |
| MS.gene052224 | MS.gene94206 | -0.822592 | 2.18E-53 | -1.69E-46 |
| MS.gene052224 | MS.gene95023 | -0.826115 | 3.24E-54 | -1.69E-46 |
| MS.gene052224 | MS.gene96790 | 0.845752 | 3.34E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052224.t1 | MTR_3g087590 | 99.608 | 510 | 2 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1052 |
| MS.gene052224.t1 | MTR_8g091320 | 91.373 | 510 | 44 | 0 | 1 | 510 | 1 | 510 | 0.0 | 985 |
| MS.gene052224.t1 | MTR_3g087590 | 99.336 | 452 | 3 | 0 | 1 | 452 | 1 | 452 | 0.0 | 927 |
| MS.gene052224.t1 | MTR_3g087590 | 99.765 | 425 | 1 | 0 | 86 | 510 | 4 | 428 | 0.0 | 876 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052224.t1 | AT2G22240 | 88.431 | 510 | 59 | 0 | 1 | 510 | 1 | 510 | 0.0 | 963 |
| MS.gene052224.t1 | AT5G10170 | 88.235 | 510 | 60 | 0 | 1 | 510 | 1 | 510 | 0.0 | 960 |
| MS.gene052224.t1 | AT4G39800 | 88.845 | 511 | 56 | 1 | 1 | 510 | 1 | 511 | 0.0 | 959 |
| MS.gene052224.t1 | AT2G22240 | 87.778 | 450 | 55 | 0 | 1 | 450 | 1 | 450 | 0.0 | 843 |
| MS.gene052224.t1 | AT2G22240 | 88.684 | 380 | 43 | 0 | 131 | 510 | 1 | 380 | 0.0 | 718 |
Find 134 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATATTCATGTCCCTAAAT+TGG | 0.139724 | 3.2:+74706993 | MS.gene052224:CDS |
| TAGGATACTAACCCCAATTT+AGG | 0.157622 | 3.2:-74707006 | None:intergenic |
| ACATGAATTCAGGGAATTTA+AGG | 0.214114 | 3.2:+74708210 | MS.gene052224:intron |
| CACCAAAACAGATTTCATTT+TGG | 0.237842 | 3.2:-74708602 | None:intergenic |
| TAGGGTAATGCTTGTGGGCT+GGG | 0.247084 | 3.2:+74707108 | MS.gene052224:intron |
| AGTCAAGGATCCAAAGTAAT+TGG | 0.258694 | 3.2:-74707305 | None:intergenic |
| TTTGGCTGCTCCTATTATCT+TGG | 0.260165 | 3.2:+74709186 | MS.gene052224:CDS |
| GACCAAAATGAAATCTGTTT+TGG | 0.315009 | 3.2:+74708600 | MS.gene052224:CDS |
| AGAACCAAGTCCAAGATAAT+AGG | 0.315065 | 3.2:-74709196 | None:intergenic |
| ACTTAATGTCTTTGATGATT+TGG | 0.316276 | 3.2:-74708095 | None:intergenic |
| GTTTGCCATTGCTTGTGTTA+TGG | 0.321854 | 3.2:+74708378 | MS.gene052224:CDS |
| GGCTTGTTGAATCTTATCTT+TGG | 0.324221 | 3.2:-74707284 | None:intergenic |
| GATATTCATGTCCCTAAATT+GGG | 0.324625 | 3.2:+74706994 | MS.gene052224:CDS |
| TTAGGGTAATGCTTGTGGGC+TGG | 0.326783 | 3.2:+74707107 | MS.gene052224:intron |
| TGATCATGTTGTAGTCATTA+AGG | 0.330877 | 3.2:+74708968 | MS.gene052224:CDS |
| CACATGTGAGGACTCCCTTT+TGG | 0.337114 | 3.2:+74709168 | MS.gene052224:CDS |
| TGCTCCTATTATCTTGGACT+TGG | 0.337540 | 3.2:+74709192 | MS.gene052224:CDS |
| AATCAAACAGTTGTTCTTGA+TGG | 0.339221 | 3.2:-74708551 | None:intergenic |
| CAATTTAGGGACATGAATAT+CGG | 0.345716 | 3.2:-74706992 | None:intergenic |
| TTCTGTCCACAGCAGCAAAA+AGG | 0.352039 | 3.2:-74708327 | None:intergenic |
| AGGATACTAACCCCAATTTA+GGG | 0.368499 | 3.2:-74707005 | None:intergenic |
| CTGATGCCATGGCTAGGGCC+AGG | 0.381997 | 3.2:+74707923 | MS.gene052224:CDS |
| ATTCAACAAGCCAATTACTT+TGG | 0.386610 | 3.2:+74707295 | MS.gene052224:CDS |
| TCCTTGGAGCGGAAGGTTTG+TGG | 0.393131 | 3.2:-74708873 | None:intergenic |
| CCTTGGAGCGGAAGGTTTGT+GGG | 0.393231 | 3.2:-74708872 | None:intergenic |
| GAATCCATGGTTCCACTTCC+CGG | 0.397208 | 3.2:+74707988 | MS.gene052224:CDS |
| GTGGATTTCCTTGTAGGAGC+TGG | 0.403897 | 3.2:+74708622 | MS.gene052224:CDS |
| TTATCTGACCAAGGCTCCTC+TGG | 0.410514 | 3.2:+74710051 | MS.gene052224:CDS |
| GAGAATGTTCCTTTCATCAA+TGG | 0.416258 | 3.2:+74708400 | MS.gene052224:CDS |
| TAACACAAGCAATGGCAAAC+AGG | 0.418453 | 3.2:-74708375 | None:intergenic |
| GTTGCTCTTGGAAATTTCCT+TGG | 0.419538 | 3.2:-74708889 | None:intergenic |
| GTCAAAGCAGCGAGCAATGC+TGG | 0.421080 | 3.2:+74710207 | MS.gene052224:CDS |
| TCTAGGATCATGTTGTTCTC+TGG | 0.422099 | 3.2:-74710262 | None:intergenic |
| ATCGTCAACAACGTTGCTCT+TGG | 0.428897 | 3.2:-74708901 | None:intergenic |
| GATTTCATTGCTGCTAATCA+AGG | 0.434233 | 3.2:+74708024 | MS.gene052224:CDS |
| GAGCATGAATTTCCTCTCCT+TGG | 0.438687 | 3.2:-74707357 | None:intergenic |
| GAGCAACGTTGTTGACGATA+TGG | 0.445374 | 3.2:+74708905 | MS.gene052224:CDS |
| TTGTTGAATCTTATCTTTGG+TGG | 0.450721 | 3.2:-74707281 | None:intergenic |
| CCCTGCTTCACTTGTACTCT+AGG | 0.451998 | 3.2:-74710279 | None:intergenic |
| TGATTAGCAGCAATGAAATC+CGG | 0.452153 | 3.2:-74708021 | None:intergenic |
| ATCAAGAACAACTGTTTGAT+TGG | 0.452379 | 3.2:+74708553 | MS.gene052224:CDS |
| TTTGTTAGGGTAATGCTTGT+GGG | 0.455984 | 3.2:+74707103 | MS.gene052224:intron |
| TTGATTTGCAAAAGCAATTG+AGG | 0.457030 | 3.2:+74707956 | MS.gene052224:CDS |
| AGATAATAGGAGCAGCCAAA+AGG | 0.457683 | 3.2:-74709183 | None:intergenic |
| AGGTACAGTAACTTAGTTGT+AGG | 0.460941 | 3.2:+74708283 | MS.gene052224:CDS |
| TTAATGACTACAACATGATC+AGG | 0.467562 | 3.2:-74708966 | None:intergenic |
| AGGGTAATGCTTGTGGGCTG+GGG | 0.467936 | 3.2:+74707109 | MS.gene052224:intron |
| GAAATCCGGGTCATAGATAC+CGG | 0.470564 | 3.2:-74708007 | None:intergenic |
| TAACTGAGGATGGTAGCAAC+GGG | 0.472877 | 3.2:-74710031 | None:intergenic |
| GATTCAGTGTACTTAACATT+GGG | 0.477319 | 3.2:-74706859 | None:intergenic |
| GGTGGTTTCGTAATTGTAAA+CGG | 0.478186 | 3.2:-74706893 | None:intergenic |
| GTAATGCTTGTGGGCTGGGG+TGG | 0.481711 | 3.2:+74707112 | MS.gene052224:CDS |
| ATTATACGTGCAGGTTCCAC+CGG | 0.482882 | 3.2:+74710162 | MS.gene052224:intron |
| GGAACCATGGATTCCATGTA+AGG | 0.483038 | 3.2:-74707979 | None:intergenic |
| GATAATAGGAGCAGCCAAAA+GGG | 0.486125 | 3.2:-74709182 | None:intergenic |
| ACGTGCAAATAACGTTATCA+AGG | 0.491091 | 3.2:+74708050 | MS.gene052224:CDS |
| TGATGCCATGGCTAGGGCCA+GGG | 0.493673 | 3.2:+74707924 | MS.gene052224:CDS |
| GGAAATTTCCTTGGAGCGGA+AGG | 0.501533 | 3.2:-74708880 | None:intergenic |
| AAATATTTACCATTGGAAGA+AGG | 0.501662 | 3.2:-74707390 | None:intergenic |
| CAAGCTTCAGCTATTCGAGT+TGG | 0.504429 | 3.2:+74707328 | MS.gene052224:CDS |
| CCTTGTAGGAGCTGGTATCA+AGG | 0.505836 | 3.2:+74708630 | MS.gene052224:CDS |
| AAAGCAATTGAGGCCTTACA+TGG | 0.505909 | 3.2:+74707966 | MS.gene052224:CDS |
| ATAGTGAGTTACAATCATCT+TGG | 0.506560 | 3.2:+74708822 | MS.gene052224:CDS |
| AGCAATAACACCACCGGTAA+GGG | 0.507926 | 3.2:-74707149 | None:intergenic |
| CTCTTGCTGTCACCAACATA+AGG | 0.508453 | 3.2:-74709082 | None:intergenic |
| ATTTGTTAGGGTAATGCTTG+TGG | 0.509057 | 3.2:+74707102 | MS.gene052224:intron |
| TTTCAAGAGCCTTCTTCCAA+TGG | 0.511249 | 3.2:+74707381 | MS.gene052224:CDS |
| CATGAGAGCTTGTGTTGGAT+TGG | 0.511914 | 3.2:+74710237 | MS.gene052224:CDS |
| AACAACGGTTCAACCCTTAC+CGG | 0.512660 | 3.2:+74707136 | MS.gene052224:CDS |
| CTTGTTCATGAAAATCGTAA+TGG | 0.514368 | 3.2:+74706919 | MS.gene052224:CDS |
| TTGCAGTATGTGCCTTATGT+TGG | 0.518481 | 3.2:+74709070 | MS.gene052224:intron |
| AGATTCAGTGTACTTAACAT+TGG | 0.521108 | 3.2:-74706860 | None:intergenic |
| TTTGACAATGCATTCACCAC+TGG | 0.524218 | 3.2:-74710190 | None:intergenic |
| CCTTGATACCAGCTCCTACA+AGG | 0.526501 | 3.2:-74708630 | None:intergenic |
| TTAACGCACCAGAGGAGCCT+TGG | 0.528664 | 3.2:-74710059 | None:intergenic |
| GATGGTAGCAACGGGGTGAA+AGG | 0.529485 | 3.2:-74710023 | None:intergenic |
| TAGCAATAACACCACCGGTA+AGG | 0.532037 | 3.2:-74707150 | None:intergenic |
| AATCATCTTGGAAACAATGA+TGG | 0.537294 | 3.2:+74708834 | MS.gene052224:CDS |
| GGGTCATAGATACCGGGAAG+TGG | 0.539794 | 3.2:-74708000 | None:intergenic |
| ACATGATCAGGATGTTCGCC+AGG | 0.540181 | 3.2:-74708954 | None:intergenic |
| GCATTCACCACTGGTGTGCC+CGG | 0.540361 | 3.2:-74710181 | None:intergenic |
| TGGACAGAGTTGTTGTACTC+TGG | 0.548164 | 3.2:+74708245 | MS.gene052224:CDS |
| CCTTGCTGATGCCATGGCTA+GGG | 0.551502 | 3.2:+74707918 | MS.gene052224:CDS |
| GAGGCCTTACATGGAATCCA+TGG | 0.553960 | 3.2:+74707975 | MS.gene052224:CDS |
| ATTCGAGTTGGATCTTTCCA+AGG | 0.554359 | 3.2:+74707340 | MS.gene052224:CDS |
| AACATCATGAGAGCTTGTGT+TGG | 0.560655 | 3.2:+74710232 | MS.gene052224:CDS |
| CCCACAAACCTTCCGCTCCA+AGG | 0.565550 | 3.2:+74708872 | MS.gene052224:CDS |
| AGTTGGATCTTTCCAAGGAG+AGG | 0.567879 | 3.2:+74707345 | MS.gene052224:CDS |
| TGAGGACTTCCATTGATGAA+AGG | 0.570861 | 3.2:-74708409 | None:intergenic |
| ACCTTGCTGATGCCATGGCT+AGG | 0.571457 | 3.2:+74707917 | MS.gene052224:CDS |
| GTTACTGTACCTCTCTGTGT+TGG | 0.574857 | 3.2:-74708272 | None:intergenic |
| CTTGGAGCGGAAGGTTTGTG+GGG | 0.577089 | 3.2:-74708871 | None:intergenic |
| CATGAACCTTGCTGATGCCA+TGG | 0.578935 | 3.2:+74707912 | MS.gene052224:CDS |
| AACACAAGCAATGGCAAACA+GGG | 0.579935 | 3.2:-74708374 | None:intergenic |
| TCAGTTTAAATCTGAAGCTG+AGG | 0.583789 | 3.2:+74709243 | MS.gene052224:CDS |
| GCAATGGCAAACAGGGTGGA+AGG | 0.586236 | 3.2:-74708367 | None:intergenic |
| GATTAGCAGCAATGAAATCC+GGG | 0.589255 | 3.2:-74708020 | None:intergenic |
| ATTGGAAGAAGGCTCTTGAA+AGG | 0.589300 | 3.2:-74707379 | None:intergenic |
| ATCGTAATGGCACTTATCAG+TGG | 0.589528 | 3.2:+74706932 | MS.gene052224:CDS |
| GTGGGCTGGGGTGGAAACAA+CGG | 0.593220 | 3.2:+74707121 | MS.gene052224:CDS |
| TTGTAACTCACTATTGATGT+TGG | 0.597352 | 3.2:-74708813 | None:intergenic |
| ACTTCCCGGTATCTATGACC+CGG | 0.600843 | 3.2:+74708002 | MS.gene052224:CDS |
| TGGTGACAGCAAGAGAGCTA+TGG | 0.602579 | 3.2:+74709090 | MS.gene052224:CDS |
| ATAACTGAGGATGGTAGCAA+CGG | 0.602604 | 3.2:-74710032 | None:intergenic |
| ATTCTCCATAACACAAGCAA+TGG | 0.605875 | 3.2:-74708383 | None:intergenic |
| CCCTAGCCATGGCATCAGCA+AGG | 0.607382 | 3.2:-74707918 | None:intergenic |
| AAGAACAACTGTTTGATTGG+TGG | 0.609331 | 3.2:+74708556 | MS.gene052224:CDS |
| TTCGCCAGGTGCATAGAGGA+TGG | 0.609515 | 3.2:-74708940 | None:intergenic |
| AATGCCATCCTCTATGCACC+TGG | 0.609865 | 3.2:+74708936 | MS.gene052224:CDS |
| ATATTCATGTCCCTAAATTG+GGG | 0.612827 | 3.2:+74706995 | MS.gene052224:CDS |
| GGAAGGTTTGTGGGGCTGAG+AGG | 0.615482 | 3.2:-74708863 | None:intergenic |
| GGTTCCACCGGGCACACCAG+TGG | 0.615777 | 3.2:+74710174 | MS.gene052224:intron |
| CGTGCAAATAACGTTATCAA+GGG | 0.615803 | 3.2:+74708051 | MS.gene052224:CDS |
| TTATACGTGCAGGTTCCACC+GGG | 0.621923 | 3.2:+74710163 | MS.gene052224:intron |
| CTTGGTCAGATAACTGAGGA+TGG | 0.622462 | 3.2:-74710041 | None:intergenic |
| CCTGGAACAAAAGTGTTCTG+AGG | 0.628658 | 3.2:-74708427 | None:intergenic |
| TCTTGGAAATTTCCTTGGAG+CGG | 0.633995 | 3.2:-74708884 | None:intergenic |
| AATAGCTGAAGCTTGAGTCA+AGG | 0.634507 | 3.2:-74707320 | None:intergenic |
| TTCACCACTGGTGTGCCCGG+TGG | 0.637974 | 3.2:-74710178 | None:intergenic |
| GGTGGTGATGATTTCAAGAG+TGG | 0.641949 | 3.2:+74708574 | MS.gene052224:CDS |
| TCTGTTAGCAATAACACCAC+CGG | 0.649419 | 3.2:-74707155 | None:intergenic |
| AGCTATGGATGAGTACACTT+CGG | 0.651582 | 3.2:+74709105 | MS.gene052224:CDS |
| ATTTAAGGAAGCAAACAAAG+TGG | 0.652703 | 3.2:+74708225 | MS.gene052224:CDS |
| CATCCTCAGTTATCTGACCA+AGG | 0.657948 | 3.2:+74710042 | MS.gene052224:CDS |
| AACGGTTCAACCCTTACCGG+TGG | 0.661685 | 3.2:+74707139 | MS.gene052224:CDS |
| GATACCGGGAAGTGGAACCA+TGG | 0.668036 | 3.2:-74707992 | None:intergenic |
| GATGTTCGCCAGGTGCATAG+AGG | 0.676178 | 3.2:-74708944 | None:intergenic |
| AAATCCGGGTCATAGATACC+GGG | 0.679094 | 3.2:-74708006 | None:intergenic |
| ACAAGCAATGGCAAACAGGG+TGG | 0.679241 | 3.2:-74708371 | None:intergenic |
| TCTGGACTGCCAACACAGAG+AGG | 0.697710 | 3.2:+74708263 | MS.gene052224:CDS |
| TGTAGGACTCAATGACACCA+TGG | 0.702021 | 3.2:+74708300 | MS.gene052224:CDS |
| GAGCCTTGGTCAGATAACTG+AGG | 0.725753 | 3.2:-74710045 | None:intergenic |
| AACTGAGGATGGTAGCAACG+GGG | 0.750164 | 3.2:-74710030 | None:intergenic |
| TGTGTTGCACAACACATGTG+AGG | 0.753320 | 3.2:+74709156 | MS.gene052224:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTTTAAAAATAAAA+TGG | + | chr3.2:74707778-74707797 | MS.gene052224:intron | 0.0% |
| !! | AAAAAATCAATTAAAACAAA+AGG | - | chr3.2:74707424-74707443 | None:intergenic | 10.0% |
| !! | AAAAATCAATTAAAACAAAA+GGG | - | chr3.2:74707423-74707442 | None:intergenic | 10.0% |
| !! | CTGATTTATTTATTATTTAT+TGG | + | chr3.2:74707075-74707094 | MS.gene052224:intron | 10.0% |
| !!! | TTTTATTAATTGTGATTAAT+GGG | + | chr3.2:74707206-74707225 | MS.gene052224:intron | 10.0% |
| !!! | TTTTTATTAATTGTGATTAA+TGG | + | chr3.2:74707205-74707224 | MS.gene052224:intron | 10.0% |
| !! | AAAATCAATTAAAACAAAAG+GGG | - | chr3.2:74707422-74707441 | None:intergenic | 15.0% |
| !!! | AATTCATATTTAACAGTTTT+AGG | - | chr3.2:74706967-74706986 | None:intergenic | 15.0% |
| !!! | AATTTTGATTATGATTTTCA+GGG | + | chr3.2:74707246-74707265 | MS.gene052224:intron | 15.0% |
| !!! | ATGTAGTTTTTCTATTTTTT+TGG | + | chr3.2:74707489-74707508 | MS.gene052224:intron | 15.0% |
| !!! | TAATTTTGATTATGATTTTC+AGG | + | chr3.2:74707245-74707264 | MS.gene052224:intron | 15.0% |
| !! | ATTTGATACAAAGATTGTAA+TGG | - | chr3.2:74709410-74709429 | None:intergenic | 20.0% |
| !! | GAAAGATTATGAATGAAATT+AGG | - | chr3.2:74707028-74707047 | None:intergenic | 20.0% |
| !! | GTTTAAGAAATATTTACCAT+TGG | - | chr3.2:74707400-74707419 | None:intergenic | 20.0% |
| !! | TATTATATTATTATACGTGC+AGG | + | chr3.2:74710153-74710172 | MS.gene052224:intron | 20.0% |
| !! | TGATTATGAACAATAACAAA+TGG | - | chr3.2:74709619-74709638 | None:intergenic | 20.0% |
| !! | TTAAATTGAATACGACTAAT+AGG | + | chr3.2:74707607-74707626 | MS.gene052224:intron | 20.0% |
| !! | TTAACTTCAGAAATAATACA+AGG | - | chr3.2:74709970-74709989 | None:intergenic | 20.0% |
| !!! | ACTTTTCTTTTATTATCATC+AGG | + | chr3.2:74708514-74708533 | MS.gene052224:intron | 20.0% |
| !!! | ATTTATTGGTTTGATTTGTT+AGG | + | chr3.2:74707089-74707108 | MS.gene052224:intron | 20.0% |
| !!! | ATTTTGATTATGATTTTCAG+GGG | + | chr3.2:74707247-74707266 | MS.gene052224:intron | 20.0% |
| !!! | CTTTTCTTTTATTATCATCA+GGG | + | chr3.2:74708515-74708534 | MS.gene052224:intron | 20.0% |
| !!! | TAAAGCATTAAAGCTTTTTT+TGG | + | chr3.2:74709577-74709596 | MS.gene052224:intron | 20.0% |
| !!! | TTTAATTTTGCAACAAGAAA+AGG | + | chr3.2:74708761-74708780 | MS.gene052224:intron | 20.0% |
| !!! | TTTATTGGTTTGATTTGTTA+GGG | + | chr3.2:74707090-74707109 | MS.gene052224:intron | 20.0% |
| !!! | TTTTCTATTTTTTTGGTTCA+AGG | + | chr3.2:74707496-74707515 | MS.gene052224:intron | 20.0% |
| ! | AAATATTTACCATTGGAAGA+AGG | - | chr3.2:74707393-74707412 | None:intergenic | 25.0% |
| ! | ATATTAATCTACATGCTTCA+TGG | + | chr3.2:74708125-74708144 | MS.gene052224:intron | 25.0% |
| ! | CAGATGGAATTATAGTATTA+AGG | - | chr3.2:74709482-74709501 | None:intergenic | 25.0% |
| ! | GAATTATAGTATTAAGGAGA+CGG | - | chr3.2:74709476-74709495 | None:intergenic | 25.0% |
| ! | TTAATGAACTTATGTTGTGA+AGG | - | chr3.2:74709654-74709673 | None:intergenic | 25.0% |
| !! | AATTCATTGATAACAATCTC+TGG | - | chr3.2:74709331-74709350 | None:intergenic | 25.0% |
| !! | ACTTAATGTCTTTGATGATT+TGG | - | chr3.2:74708098-74708117 | None:intergenic | 25.0% |
| !! | ATATTCAGCAAATTTTAAGC+TGG | - | chr3.2:74708178-74708197 | None:intergenic | 25.0% |
| !! | GTGATTAATGGGAAATTTTA+TGG | + | chr3.2:74707217-74707236 | MS.gene052224:intron | 25.0% |
| !! | TTATATACTGTAACCTTTTC+AGG | + | chr3.2:74709022-74709041 | MS.gene052224:intron | 25.0% |
| !! | TTCTTTTGCAACATAAACTA+GGG | - | chr3.2:74709282-74709301 | None:intergenic | 25.0% |
| AAAATGACACGAAATGCAAA+TGG | - | chr3.2:74709841-74709860 | None:intergenic | 30.0% | |
| AAATAAAATGGAGTCCAAGA+TGG | + | chr3.2:74707790-74707809 | MS.gene052224:intron | 30.0% | |
| AATCAAACAGTTGTTCTTGA+TGG | - | chr3.2:74708554-74708573 | None:intergenic | 30.0% | |
| AATCAAGTGACAGATTTAGA+GGG | - | chr3.2:74708474-74708493 | None:intergenic | 30.0% | |
| AATCATCTTGGAAACAATGA+TGG | + | chr3.2:74708834-74708853 | MS.gene052224:CDS | 30.0% | |
| ACATGAATTCAGGGAATTTA+AGG | + | chr3.2:74708210-74708229 | MS.gene052224:intron | 30.0% | |
| AGATTCAGTGTACTTAACAT+TGG | - | chr3.2:74706863-74706882 | None:intergenic | 30.0% | |
| ATAAAGAGAAGAAACAAACC+TGG | - | chr3.2:74708448-74708467 | None:intergenic | 30.0% | |
| ATAGTGAGTTACAATCATCT+TGG | + | chr3.2:74708822-74708841 | MS.gene052224:CDS | 30.0% | |
| ATATTCATGTCCCTAAATTG+GGG | + | chr3.2:74706995-74707014 | MS.gene052224:CDS | 30.0% | |
| ATCAAGAACAACTGTTTGAT+TGG | + | chr3.2:74708553-74708572 | MS.gene052224:CDS | 30.0% | |
| ATCAGTTTAAGCATGCTATA+AGG | + | chr3.2:74707711-74707730 | MS.gene052224:intron | 30.0% | |
| ATTCAACAAGCCAATTACTT+TGG | + | chr3.2:74707295-74707314 | MS.gene052224:CDS | 30.0% | |
| ATTTAAGGAAGCAAACAAAG+TGG | + | chr3.2:74708225-74708244 | MS.gene052224:CDS | 30.0% | |
| ATTTAATATGTGACATGCAG+TGG | - | chr3.2:74707593-74707612 | None:intergenic | 30.0% | |
| ATTTCAACAGGTCTAATTTG+AGG | + | chr3.2:74707630-74707649 | MS.gene052224:intron | 30.0% | |
| CAATTTAGGGACATGAATAT+CGG | - | chr3.2:74706995-74707014 | None:intergenic | 30.0% | |
| CTTGTTCATGAAAATCGTAA+TGG | + | chr3.2:74706919-74706938 | MS.gene052224:CDS | 30.0% | |
| GAAACTTGAGAATAACACAT+TGG | - | chr3.2:74709782-74709801 | None:intergenic | 30.0% | |
| GATATTCATGTCCCTAAATT+GGG | + | chr3.2:74706994-74707013 | MS.gene052224:CDS | 30.0% | |
| GATTCAGTGTACTTAACATT+GGG | - | chr3.2:74706862-74706881 | None:intergenic | 30.0% | |
| TAATCAAGTGACAGATTTAG+AGG | - | chr3.2:74708475-74708494 | None:intergenic | 30.0% | |
| TGATCATGTTGTAGTCATTA+AGG | + | chr3.2:74708968-74708987 | MS.gene052224:CDS | 30.0% | |
| TTAATGACTACAACATGATC+AGG | - | chr3.2:74708969-74708988 | None:intergenic | 30.0% | |
| TTCGTTGAAAAACTATATGC+AGG | + | chr3.2:74707846-74707865 | MS.gene052224:intron | 30.0% | |
| TTGTAACTCACTATTGATGT+TGG | - | chr3.2:74708816-74708835 | None:intergenic | 30.0% | |
| TTGTTGAATCTTATCTTTGG+TGG | - | chr3.2:74707284-74707303 | None:intergenic | 30.0% | |
| ! | ACGATTTTCATGAACAAGTT+CGG | - | chr3.2:74706917-74706936 | None:intergenic | 30.0% |
| ! | CACCAAAACAGATTTCATTT+TGG | - | chr3.2:74708605-74708624 | None:intergenic | 30.0% |
| ! | GACCAAAATGAAATCTGTTT+TGG | + | chr3.2:74708600-74708619 | MS.gene052224:CDS | 30.0% |
| ! | GTTCTTTTGCAACATAAACT+AGG | - | chr3.2:74709283-74709302 | None:intergenic | 30.0% |
| ! | GTTGCTCTGAATTAATGTTT+AGG | + | chr3.2:74709697-74709716 | MS.gene052224:intron | 30.0% |
| ! | TACACTTCGGAAATTTTCAT+GGG | + | chr3.2:74709118-74709137 | MS.gene052224:CDS | 30.0% |
| !! | CAAAATGAAATCTGTTTTGG+TGG | + | chr3.2:74708603-74708622 | MS.gene052224:CDS | 30.0% |
| !! | TGACTTTTGTTTCATGTCTT+TGG | + | chr3.2:74709733-74709752 | MS.gene052224:intron | 30.0% |
| !! | TTCTGAAGTTAACTATGTTG+TGG | + | chr3.2:74709978-74709997 | MS.gene052224:intron | 30.0% |
| !! | TTGATTTGCAAAAGCAATTG+AGG | + | chr3.2:74707956-74707975 | MS.gene052224:CDS | 30.0% |
| AAGAACAACTGTTTGATTGG+TGG | + | chr3.2:74708556-74708575 | MS.gene052224:CDS | 35.0% | |
| AATCAAAGAACTCTCGTTTC+AGG | - | chr3.2:74709381-74709400 | None:intergenic | 35.0% | |
| ACGACTAATAGGATTTCAAC+AGG | + | chr3.2:74707618-74707637 | MS.gene052224:intron | 35.0% | |
| ACGTGCAAATAACGTTATCA+AGG | + | chr3.2:74708050-74708069 | MS.gene052224:CDS | 35.0% | |
| AGAACCAAGTCCAAGATAAT+AGG | - | chr3.2:74709199-74709218 | None:intergenic | 35.0% | |
| AGGATACTAACCCCAATTTA+GGG | - | chr3.2:74707008-74707027 | None:intergenic | 35.0% | |
| AGGTACAGTAACTTAGTTGT+AGG | + | chr3.2:74708283-74708302 | MS.gene052224:CDS | 35.0% | |
| AGTCAAGGATCCAAAGTAAT+TGG | - | chr3.2:74707308-74707327 | None:intergenic | 35.0% | |
| ATCCTTAACTCAAACCATCT+TGG | - | chr3.2:74707807-74707826 | None:intergenic | 35.0% | |
| ATTCTCCATAACACAAGCAA+TGG | - | chr3.2:74708386-74708405 | None:intergenic | 35.0% | |
| CAAATCAATGTCAAAAACCC+TGG | - | chr3.2:74707944-74707963 | None:intergenic | 35.0% | |
| CAACATAATCATGCAGCTTT+AGG | - | chr3.2:74709681-74709700 | None:intergenic | 35.0% | |
| CACCAAAAACAATGTCATCA+GGG | - | chr3.2:74707876-74707895 | None:intergenic | 35.0% | |
| CCTATGTTGACATGAATTCA+GGG | + | chr3.2:74708201-74708220 | MS.gene052224:intron | 35.0% | |
| CGATATTCATGTCCCTAAAT+TGG | + | chr3.2:74706993-74707012 | MS.gene052224:CDS | 35.0% | |
| CGTGCAAATAACGTTATCAA+GGG | + | chr3.2:74708051-74708070 | MS.gene052224:CDS | 35.0% | |
| GAAGAGTAAAAGACCTGAAA+AGG | - | chr3.2:74709038-74709057 | None:intergenic | 35.0% | |
| GAGAATGTTCCTTTCATCAA+TGG | + | chr3.2:74708400-74708419 | MS.gene052224:CDS | 35.0% | |
| GATTTCATTGCTGCTAATCA+AGG | + | chr3.2:74708024-74708043 | MS.gene052224:CDS | 35.0% | |
| GGTGGTTTCGTAATTGTAAA+CGG | - | chr3.2:74706896-74706915 | None:intergenic | 35.0% | |
| TAGGATACTAACCCCAATTT+AGG | - | chr3.2:74707009-74707028 | None:intergenic | 35.0% | |
| TCAGTTTCAAGAGACAAATC+CGG | + | chr3.2:74710124-74710143 | MS.gene052224:intron | 35.0% | |
| TCCTATGTTGACATGAATTC+AGG | + | chr3.2:74708200-74708219 | MS.gene052224:intron | 35.0% | |
| TGATTAGCAGCAATGAAATC+CGG | - | chr3.2:74708024-74708043 | None:intergenic | 35.0% | |
| TTGCATGTCATTGTGTAACT+TGG | - | chr3.2:74709549-74709568 | None:intergenic | 35.0% | |
| TTTGTTAGGGTAATGCTTGT+GGG | + | chr3.2:74707103-74707122 | MS.gene052224:intron | 35.0% | |
| ! | AACCCTGATGACATTGTTTT+TGG | + | chr3.2:74707871-74707890 | MS.gene052224:CDS | 35.0% |
| ! | AGGTCTTTTACTCTTCACTT+TGG | + | chr3.2:74709042-74709061 | MS.gene052224:intron | 35.0% |
| ! | ATTTGTTAGGGTAATGCTTG+TGG | + | chr3.2:74707102-74707121 | MS.gene052224:intron | 35.0% |
| ! | ATTTTCATGAACAAGTTCGG+TGG | - | chr3.2:74706914-74706933 | None:intergenic | 35.0% |
| ! | GTACACTTCGGAAATTTTCA+TGG | + | chr3.2:74709117-74709136 | MS.gene052224:CDS | 35.0% |
| ! | TCAGTTTAAATCTGAAGCTG+AGG | + | chr3.2:74709243-74709262 | MS.gene052224:CDS | 35.0% |
| !! | ATAATCATGCAGCTTTAGGA+AGG | - | chr3.2:74709677-74709696 | None:intergenic | 35.0% |
| !! | GGCTTGTTGAATCTTATCTT+TGG | - | chr3.2:74707287-74707306 | None:intergenic | 35.0% |
| !!! | ATGACATTGTTTTTGGTGGA+TGG | + | chr3.2:74707878-74707897 | MS.gene052224:CDS | 35.0% |
| !!! | GATTTTCAGGGGTATTTCAT+GGG | + | chr3.2:74707258-74707277 | MS.gene052224:intron | 35.0% |
| !!! | TGACATTGTTTTTGGTGGAT+GGG | + | chr3.2:74707879-74707898 | MS.gene052224:CDS | 35.0% |
| !!! | TGATTTTCAGGGGTATTTCA+TGG | + | chr3.2:74707257-74707276 | MS.gene052224:intron | 35.0% |
| AAAGCAATTGAGGCCTTACA+TGG | + | chr3.2:74707966-74707985 | MS.gene052224:CDS | 40.0% | |
| AACACAAGCAATGGCAAACA+GGG | - | chr3.2:74708377-74708396 | None:intergenic | 40.0% | |
| AACATCATGAGAGCTTGTGT+TGG | + | chr3.2:74710232-74710251 | MS.gene052224:CDS | 40.0% | |
| AAGTAGAATTAACGCACCAG+AGG | - | chr3.2:74710070-74710089 | None:intergenic | 40.0% | |
| AATAGCTGAAGCTTGAGTCA+AGG | - | chr3.2:74707323-74707342 | None:intergenic | 40.0% | |
| ACATAAGGCACATACTGCAA+AGG | - | chr3.2:74709070-74709089 | None:intergenic | 40.0% | |
| AGATAATAGGAGCAGCCAAA+AGG | - | chr3.2:74709186-74709205 | None:intergenic | 40.0% | |
| AGCTATGGATGAGTACACTT+CGG | + | chr3.2:74709105-74709124 | MS.gene052224:CDS | 40.0% | |
| ATAACTGAGGATGGTAGCAA+CGG | - | chr3.2:74710035-74710054 | None:intergenic | 40.0% | |
| ATCGTAATGGCACTTATCAG+TGG | + | chr3.2:74706932-74706951 | MS.gene052224:CDS | 40.0% | |
| ATTGGAAGAAGGCTCTTGAA+AGG | - | chr3.2:74707382-74707401 | None:intergenic | 40.0% | |
| CCACCAAAAACAATGTCATC+AGG | - | chr3.2:74707877-74707896 | None:intergenic | 40.0% | |
| CCCTGAATTCATGTCAACAT+AGG | - | chr3.2:74708204-74708223 | None:intergenic | 40.0% | |
| GATAATAGGAGCAGCCAAAA+GGG | - | chr3.2:74709185-74709204 | None:intergenic | 40.0% | |
| GATTAGCAGCAATGAAATCC+GGG | - | chr3.2:74708023-74708042 | None:intergenic | 40.0% | |
| GTTGCTCTTGGAAATTTCCT+TGG | - | chr3.2:74708892-74708911 | None:intergenic | 40.0% | |
| GTTTGCCATTGCTTGTGTTA+TGG | + | chr3.2:74708378-74708397 | MS.gene052224:CDS | 40.0% | |
| TAACACAAGCAATGGCAAAC+AGG | - | chr3.2:74708378-74708397 | None:intergenic | 40.0% | |
| TCTGTTAGCAATAACACCAC+CGG | - | chr3.2:74707158-74707177 | None:intergenic | 40.0% | |
| TCTTGGAAATTTCCTTGGAG+CGG | - | chr3.2:74708887-74708906 | None:intergenic | 40.0% | |
| TGAGGACTTCCATTGATGAA+AGG | - | chr3.2:74708412-74708431 | None:intergenic | 40.0% | |
| TGCTCCTATTATCTTGGACT+TGG | + | chr3.2:74709192-74709211 | MS.gene052224:CDS | 40.0% | |
| TTGCAGTATGTGCCTTATGT+TGG | + | chr3.2:74709070-74709089 | MS.gene052224:intron | 40.0% | |
| TTTCAAGAGCCTTCTTCCAA+TGG | + | chr3.2:74707381-74707400 | MS.gene052224:CDS | 40.0% | |
| TTTGACAATGCATTCACCAC+TGG | - | chr3.2:74710193-74710212 | None:intergenic | 40.0% | |
| TTTGGCTGCTCCTATTATCT+TGG | + | chr3.2:74709186-74709205 | MS.gene052224:CDS | 40.0% | |
| ! | AAACTGTGCAACTTGCTCAA+TGG | + | chr3.2:74709436-74709455 | MS.gene052224:intron | 40.0% |
| ! | ACTTCGGAAATTTTCATGGG+TGG | + | chr3.2:74709121-74709140 | MS.gene052224:CDS | 40.0% |
| ! | CTTCGGAAATTTTCATGGGT+GGG | + | chr3.2:74709122-74709141 | MS.gene052224:CDS | 40.0% |
| ! | GTCCAAGATGGTTTGAGTTA+AGG | + | chr3.2:74707802-74707821 | MS.gene052224:intron | 40.0% |
| ! | TCTAGGATCATGTTGTTCTC+TGG | - | chr3.2:74710265-74710284 | None:intergenic | 40.0% |
| ! | TGCAACTTGCTCAATGGTTA+TGG | + | chr3.2:74709442-74709461 | MS.gene052224:intron | 40.0% |
| !! | ATTCGAGTTGGATCTTTCCA+AGG | + | chr3.2:74707340-74707359 | MS.gene052224:CDS | 40.0% |
| !!! | CCTGATGACATTGTTTTTGG+TGG | + | chr3.2:74707874-74707893 | MS.gene052224:CDS | 40.0% |
| !!! | GTTTTGGTGGATTTCCTTGT+AGG | + | chr3.2:74708616-74708635 | MS.gene052224:CDS | 40.0% |
| AAATCCGGGTCATAGATACC+GGG | - | chr3.2:74708009-74708028 | None:intergenic | 45.0% | |
| AACAACGGTTCAACCCTTAC+CGG | + | chr3.2:74707136-74707155 | MS.gene052224:CDS | 45.0% | |
| AGCAATAACACCACCGGTAA+GGG | - | chr3.2:74707152-74707171 | None:intergenic | 45.0% | |
| AGCAGCAAAAAGGTTCTCCA+TGG | - | chr3.2:74708320-74708339 | None:intergenic | 45.0% | |
| AGTATTAAGGAGACGGCCTT+TGG | - | chr3.2:74709469-74709488 | None:intergenic | 45.0% | |
| AGTTGGATCTTTCCAAGGAG+AGG | + | chr3.2:74707345-74707364 | MS.gene052224:CDS | 45.0% | |
| ATCGTCAACAACGTTGCTCT+TGG | - | chr3.2:74708904-74708923 | None:intergenic | 45.0% | |
| ATTATACGTGCAGGTTCCAC+CGG | + | chr3.2:74710162-74710181 | MS.gene052224:intron | 45.0% | |
| CAAGCTTCAGCTATTCGAGT+TGG | + | chr3.2:74707328-74707347 | MS.gene052224:CDS | 45.0% | |
| CATCCTCAGTTATCTGACCA+AGG | + | chr3.2:74710042-74710061 | MS.gene052224:CDS | 45.0% | |
| CATGAGAGCTTGTGTTGGAT+TGG | + | chr3.2:74710237-74710256 | MS.gene052224:CDS | 45.0% | |
| CCATACTCTTCAGAAGCAGA+TGG | - | chr3.2:74709498-74709517 | None:intergenic | 45.0% | |
| CTTGGTCAGATAACTGAGGA+TGG | - | chr3.2:74710044-74710063 | None:intergenic | 45.0% | |
| GAAATCCGGGTCATAGATAC+CGG | - | chr3.2:74708010-74708029 | None:intergenic | 45.0% | |
| GAGCAACGTTGTTGACGATA+TGG | + | chr3.2:74708905-74708924 | MS.gene052224:CDS | 45.0% | |
| GAGCATGAATTTCCTCTCCT+TGG | - | chr3.2:74707360-74707379 | None:intergenic | 45.0% | |
| GCTCAATGGTTATGGACCAA+AGG | + | chr3.2:74709450-74709469 | MS.gene052224:intron | 45.0% | |
| GGAACCATGGATTCCATGTA+AGG | - | chr3.2:74707982-74708001 | None:intergenic | 45.0% | |
| GTTACTGTACCTCTCTGTGT+TGG | - | chr3.2:74708275-74708294 | None:intergenic | 45.0% | |
| TAACTGAGGATGGTAGCAAC+GGG | - | chr3.2:74710034-74710053 | None:intergenic | 45.0% | |
| TAGCAATAACACCACCGGTA+AGG | - | chr3.2:74707153-74707172 | None:intergenic | 45.0% | |
| TGGACAGAGTTGTTGTACTC+TGG | + | chr3.2:74708245-74708264 | MS.gene052224:CDS | 45.0% | |
| TGTAGGACTCAATGACACCA+TGG | + | chr3.2:74708300-74708319 | MS.gene052224:CDS | 45.0% | |
| TGTGTTGCACAACACATGTG+AGG | + | chr3.2:74709156-74709175 | MS.gene052224:CDS | 45.0% | |
| TTCTGTCCACAGCAGCAAAA+AGG | - | chr3.2:74708330-74708349 | None:intergenic | 45.0% | |
| ! | CCATCTGCTTCTGAAGAGTA+TGG | + | chr3.2:74709495-74709514 | MS.gene052224:intron | 45.0% |
| ! | CCTCAGAACACTTTTGTTCC+AGG | + | chr3.2:74708427-74708446 | MS.gene052224:CDS | 45.0% |
| ! | CTCTTGCTGTCACCAACATA+AGG | - | chr3.2:74709085-74709104 | None:intergenic | 45.0% |
| ! | GGTGGTGATGATTTCAAGAG+TGG | + | chr3.2:74708574-74708593 | MS.gene052224:CDS | 45.0% |
| !! | CCTGGAACAAAAGTGTTCTG+AGG | - | chr3.2:74708430-74708449 | None:intergenic | 45.0% |
| !! | TAATAATATAATATAATAAC+CGG | - | chr3.2:74710146-74710165 | None:intergenic | 5.0% |
| AACTGAGGATGGTAGCAACG+GGG | - | chr3.2:74710033-74710052 | None:intergenic | 50.0% | |
| AATGCCATCCTCTATGCACC+TGG | + | chr3.2:74708936-74708955 | MS.gene052224:CDS | 50.0% | |
| ACAAGCAATGGCAAACAGGG+TGG | - | chr3.2:74708374-74708393 | None:intergenic | 50.0% | |
| ACATGATCAGGATGTTCGCC+AGG | - | chr3.2:74708957-74708976 | None:intergenic | 50.0% | |
| ACTTCCCGGTATCTATGACC+CGG | + | chr3.2:74708002-74708021 | MS.gene052224:CDS | 50.0% | |
| CATGAACCTTGCTGATGCCA+TGG | + | chr3.2:74707912-74707931 | MS.gene052224:CDS | 50.0% | |
| CCTTGATACCAGCTCCTACA+AGG | - | chr3.2:74708633-74708652 | None:intergenic | 50.0% | |
| CCTTGTAGGAGCTGGTATCA+AGG | + | chr3.2:74708630-74708649 | MS.gene052224:CDS | 50.0% | |
| GAATCCATGGTTCCACTTCC+CGG | + | chr3.2:74707988-74708007 | MS.gene052224:CDS | 50.0% | |
| GAGCCTTGGTCAGATAACTG+AGG | - | chr3.2:74710048-74710067 | None:intergenic | 50.0% | |
| GAGGCCTTACATGGAATCCA+TGG | + | chr3.2:74707975-74707994 | MS.gene052224:CDS | 50.0% | |
| GGAAATTTCCTTGGAGCGGA+AGG | - | chr3.2:74708883-74708902 | None:intergenic | 50.0% | |
| GTGGATTTCCTTGTAGGAGC+TGG | + | chr3.2:74708622-74708641 | MS.gene052224:CDS | 50.0% | |
| TAGGGTAATGCTTGTGGGCT+GGG | + | chr3.2:74707108-74707127 | MS.gene052224:intron | 50.0% | |
| TGGTGACAGCAAGAGAGCTA+TGG | + | chr3.2:74709090-74709109 | MS.gene052224:CDS | 50.0% | |
| TTAGGGTAATGCTTGTGGGC+TGG | + | chr3.2:74707107-74707126 | MS.gene052224:intron | 50.0% | |
| TTATACGTGCAGGTTCCACC+GGG | + | chr3.2:74710163-74710182 | MS.gene052224:intron | 50.0% | |
| TTATCTGACCAAGGCTCCTC+TGG | + | chr3.2:74710051-74710070 | MS.gene052224:CDS | 50.0% | |
| ! | CACATGTGAGGACTCCCTTT+TGG | + | chr3.2:74709168-74709187 | MS.gene052224:CDS | 50.0% |
| ! | CTCTCGTTTCAGGTGTCAGA+AGG | - | chr3.2:74709371-74709390 | None:intergenic | 50.0% |
| ! | GGAGAACCTTTTTGCTGCTG+TGG | + | chr3.2:74708321-74708340 | MS.gene052224:CDS | 50.0% |
| AAAAACCCTGGCCCTAGCCA+TGG | - | chr3.2:74707932-74707951 | None:intergenic | 55.0% | |
| AACGGTTCAACCCTTACCGG+TGG | + | chr3.2:74707139-74707158 | MS.gene052224:CDS | 55.0% | |
| ACCTTGCTGATGCCATGGCT+AGG | + | chr3.2:74707917-74707936 | MS.gene052224:CDS | 55.0% | |
| CCTTGCTGATGCCATGGCTA+GGG | + | chr3.2:74707918-74707937 | MS.gene052224:CDS | 55.0% | |
| CCTTGGAGCGGAAGGTTTGT+GGG | - | chr3.2:74708875-74708894 | None:intergenic | 55.0% | |
| CTTGGAGCGGAAGGTTTGTG+GGG | - | chr3.2:74708874-74708893 | None:intergenic | 55.0% | |
| GATACCGGGAAGTGGAACCA+TGG | - | chr3.2:74707995-74708014 | None:intergenic | 55.0% | |
| GATGGTAGCAACGGGGTGAA+AGG | - | chr3.2:74710026-74710045 | None:intergenic | 55.0% | |
| GATGTTCGCCAGGTGCATAG+AGG | - | chr3.2:74708947-74708966 | None:intergenic | 55.0% | |
| GCAATGGCAAACAGGGTGGA+AGG | - | chr3.2:74708370-74708389 | None:intergenic | 55.0% | |
| GGGTCATAGATACCGGGAAG+TGG | - | chr3.2:74708003-74708022 | None:intergenic | 55.0% | |
| GTCAAAGCAGCGAGCAATGC+TGG | + | chr3.2:74710207-74710226 | MS.gene052224:CDS | 55.0% | |
| TCCTTGGAGCGGAAGGTTTG+TGG | - | chr3.2:74708876-74708895 | None:intergenic | 55.0% | |
| TCTGGACTGCCAACACAGAG+AGG | + | chr3.2:74708263-74708282 | MS.gene052224:CDS | 55.0% | |
| TTAACGCACCAGAGGAGCCT+TGG | - | chr3.2:74710062-74710081 | None:intergenic | 55.0% | |
| TTCGCCAGGTGCATAGAGGA+TGG | - | chr3.2:74708943-74708962 | None:intergenic | 55.0% | |
| ! | AGGGTAATGCTTGTGGGCTG+GGG | + | chr3.2:74707109-74707128 | MS.gene052224:intron | 55.0% |
| CCCACAAACCTTCCGCTCCA+AGG | + | chr3.2:74708872-74708891 | MS.gene052224:CDS | 60.0% | |
| CCCTAGCCATGGCATCAGCA+AGG | - | chr3.2:74707921-74707940 | None:intergenic | 60.0% | |
| GCATTCACCACTGGTGTGCC+CGG | - | chr3.2:74710184-74710203 | None:intergenic | 60.0% | |
| GGAAGGTTTGTGGGGCTGAG+AGG | - | chr3.2:74708866-74708885 | None:intergenic | 60.0% | |
| TGATGCCATGGCTAGGGCCA+GGG | + | chr3.2:74707924-74707943 | MS.gene052224:CDS | 60.0% | |
| !! | GTAATGCTTGTGGGCTGGGG+TGG | + | chr3.2:74707112-74707131 | MS.gene052224:CDS | 60.0% |
| !! | GTGGGCTGGGGTGGAAACAA+CGG | + | chr3.2:74707121-74707140 | MS.gene052224:CDS | 60.0% |
| CTGATGCCATGGCTAGGGCC+AGG | + | chr3.2:74707923-74707942 | MS.gene052224:CDS | 65.0% | |
| TTCACCACTGGTGTGCCCGG+TGG | - | chr3.2:74710181-74710200 | None:intergenic | 65.0% | |
| GGTTCCACCGGGCACACCAG+TGG | + | chr3.2:74710174-74710193 | MS.gene052224:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 74706829 | 74710294 | 74706829 | ID=MS.gene052224 |
| chr3.2 | mRNA | 74706829 | 74710294 | 74706829 | ID=MS.gene052224.t1;Parent=MS.gene052224 |
| chr3.2 | exon | 74706829 | 74707016 | 74706829 | ID=MS.gene052224.t1.exon1;Parent=MS.gene052224.t1 |
| chr3.2 | CDS | 74706829 | 74707016 | 74706829 | ID=cds.MS.gene052224.t1;Parent=MS.gene052224.t1 |
| chr3.2 | exon | 74707111 | 74707179 | 74707111 | ID=MS.gene052224.t1.exon2;Parent=MS.gene052224.t1 |
| chr3.2 | CDS | 74707111 | 74707179 | 74707111 | ID=cds.MS.gene052224.t1;Parent=MS.gene052224.t1 |
| chr3.2 | exon | 74707267 | 74707402 | 74707267 | ID=MS.gene052224.t1.exon3;Parent=MS.gene052224.t1 |
| chr3.2 | CDS | 74707267 | 74707402 | 74707267 | ID=cds.MS.gene052224.t1;Parent=MS.gene052224.t1 |
| chr3.2 | exon | 74707868 | 74708115 | 74707868 | ID=MS.gene052224.t1.exon4;Parent=MS.gene052224.t1 |
| chr3.2 | CDS | 74707868 | 74708115 | 74707868 | ID=cds.MS.gene052224.t1;Parent=MS.gene052224.t1 |
| chr3.2 | exon | 74708222 | 74708448 | 74708222 | ID=MS.gene052224.t1.exon5;Parent=MS.gene052224.t1 |
| chr3.2 | CDS | 74708222 | 74708448 | 74708222 | ID=cds.MS.gene052224.t1;Parent=MS.gene052224.t1 |
| chr3.2 | exon | 74708536 | 74708651 | 74708536 | ID=MS.gene052224.t1.exon6;Parent=MS.gene052224.t1 |
| chr3.2 | CDS | 74708536 | 74708651 | 74708536 | ID=cds.MS.gene052224.t1;Parent=MS.gene052224.t1 |
| chr3.2 | exon | 74708813 | 74708989 | 74708813 | ID=MS.gene052224.t1.exon7;Parent=MS.gene052224.t1 |
| chr3.2 | CDS | 74708813 | 74708989 | 74708813 | ID=cds.MS.gene052224.t1;Parent=MS.gene052224.t1 |
| chr3.2 | exon | 74709076 | 74709264 | 74709076 | ID=MS.gene052224.t1.exon8;Parent=MS.gene052224.t1 |
| chr3.2 | CDS | 74709076 | 74709264 | 74709076 | ID=cds.MS.gene052224.t1;Parent=MS.gene052224.t1 |
| chr3.2 | exon | 74710010 | 74710072 | 74710010 | ID=MS.gene052224.t1.exon9;Parent=MS.gene052224.t1 |
| chr3.2 | CDS | 74710010 | 74710072 | 74710010 | ID=cds.MS.gene052224.t1;Parent=MS.gene052224.t1 |
| chr3.2 | exon | 74710175 | 74710294 | 74710175 | ID=MS.gene052224.t1.exon10;Parent=MS.gene052224.t1 |
| chr3.2 | CDS | 74710175 | 74710294 | 74710175 | ID=cds.MS.gene052224.t1;Parent=MS.gene052224.t1 |
| Gene Sequence |
| Protein sequence |
