Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22777.t1 | AES82362.2 | 98.1 | 476 | 9 | 0 | 1 | 476 | 8 | 483 | 3.70E-275 | 956.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22777.t1 | P42211 | 57.9 | 478 | 189 | 4 | 1 | 476 | 1 | 468 | 9.5e-163 | 574.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22777.t1 | G7KWE8 | 98.1 | 476 | 9 | 0 | 1 | 476 | 1 | 476 | 2.7e-275 | 956.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050795 | MS.gene22777 | 0.882865 | 7.27E-71 | -1.69E-46 |
| MS.gene050797 | MS.gene22777 | 0.894801 | 1.75E-75 | -1.69E-46 |
| MS.gene057174 | MS.gene22777 | 0.801489 | 8.79E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22777.t1 | MTR_7g111530 | 98.109 | 476 | 9 | 0 | 1 | 476 | 8 | 483 | 0.0 | 969 |
| MS.gene22777.t1 | MTR_7g111530 | 98.109 | 476 | 9 | 0 | 1 | 476 | 1 | 476 | 0.0 | 969 |
| MS.gene22777.t1 | MTR_7g111530 | 97.987 | 447 | 9 | 0 | 1 | 447 | 1 | 447 | 0.0 | 910 |
| MS.gene22777.t1 | MTR_1g484940 | 76.715 | 481 | 106 | 2 | 1 | 476 | 1 | 480 | 0.0 | 783 |
| MS.gene22777.t1 | MTR_4g123563 | 52.321 | 474 | 215 | 3 | 5 | 476 | 5 | 469 | 0.0 | 541 |
| MS.gene22777.t1 | MTR_4g132420 | 54.268 | 492 | 208 | 5 | 1 | 476 | 1 | 491 | 0.0 | 530 |
| MS.gene22777.t1 | MTR_2g023910 | 55.579 | 484 | 205 | 4 | 1 | 476 | 1 | 482 | 0.0 | 523 |
| MS.gene22777.t1 | MTR_2g045420 | 52.807 | 481 | 220 | 4 | 1 | 476 | 1 | 479 | 0.0 | 519 |
| MS.gene22777.t1 | MTR_2g045420 | 50.000 | 508 | 220 | 5 | 1 | 476 | 1 | 506 | 4.38e-176 | 505 |
| MS.gene22777.t1 | MTR_2g045420 | 50.099 | 507 | 220 | 5 | 1 | 476 | 1 | 505 | 5.62e-176 | 504 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22777.t1 | AT1G11910 | 58.650 | 474 | 186 | 5 | 6 | 476 | 23 | 489 | 0.0 | 566 |
| MS.gene22777.t1 | AT1G11910 | 58.650 | 474 | 186 | 5 | 6 | 476 | 12 | 478 | 0.0 | 566 |
| MS.gene22777.t1 | AT1G62290 | 55.350 | 486 | 206 | 5 | 1 | 476 | 1 | 485 | 0.0 | 550 |
| MS.gene22777.t1 | AT1G62290 | 55.350 | 486 | 206 | 5 | 1 | 476 | 1 | 485 | 0.0 | 549 |
| MS.gene22777.t1 | AT1G62290 | 55.350 | 486 | 206 | 5 | 1 | 476 | 1 | 485 | 0.0 | 549 |
| MS.gene22777.t1 | AT4G04460 | 51.789 | 475 | 223 | 3 | 6 | 476 | 8 | 480 | 0.0 | 516 |
| MS.gene22777.t1 | AT1G62290 | 55.142 | 457 | 194 | 5 | 1 | 447 | 1 | 456 | 1.58e-178 | 508 |
| MS.gene22777.t1 | AT1G62290 | 55.142 | 457 | 194 | 5 | 1 | 447 | 1 | 456 | 1.58e-178 | 508 |
| MS.gene22777.t1 | AT4G04460 | 51.579 | 475 | 220 | 4 | 6 | 476 | 8 | 476 | 3.31e-178 | 509 |
| MS.gene22777.t1 | AT1G62290 | 55.024 | 418 | 177 | 5 | 1 | 408 | 1 | 417 | 3.62e-159 | 457 |
| MS.gene22777.t1 | AT4G22050 | 41.111 | 270 | 150 | 7 | 44 | 309 | 10 | 274 | 4.45e-54 | 185 |
| MS.gene22777.t1 | AT1G69100 | 39.689 | 257 | 138 | 9 | 73 | 318 | 47 | 297 | 1.32e-49 | 174 |
| MS.gene22777.t1 | AT1G69100 | 39.689 | 257 | 138 | 9 | 73 | 318 | 39 | 289 | 1.64e-49 | 173 |
Find 0 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTCAAATGTTATTTTT+AGG | + | 50591:12108-12127 | MS.gene22777:intron | 10.0% |
| !! | ACAATAATAACATAAAAAGT+TGG | - | 50591:11843-11862 | None:intergenic | 15.0% |
| !!! | ACATGCATTTAATTTTATAT+TGG | - | 50591:11890-11909 | None:intergenic | 15.0% |
| !!! | GATTTTTTTGCTTATATTTT+AGG | - | 50591:11785-11804 | None:intergenic | 15.0% |
| !!! | TTTTTGCTTATAAAAAAAGA+CGG | + | 50591:12065-12084 | MS.gene22777:intron | 15.0% |
| !! | ACAAATTACAATTCTATTTC+TGG | + | 50591:12800-12819 | MS.gene22777:intron | 20.0% |
| !! | GATGTAAAAATAATTCTCAT+TGG | - | 50591:11957-11976 | None:intergenic | 20.0% |
| !! | GTAACTAAACTTACATTAAA+TGG | - | 50591:10799-10818 | None:intergenic | 20.0% |
| !! | TATACAACAAATAAACATAG+AGG | - | 50591:11725-11744 | None:intergenic | 20.0% |
| !! | TATGTAAAAATTGCAAACAA+TGG | - | 50591:12610-12629 | None:intergenic | 20.0% |
| !!! | ATTTTTCAAAACATAGTGAA+TGG | - | 50591:11671-11690 | None:intergenic | 20.0% |
| !!! | GAGGATATATTTTGAAATAA+GGG | + | 50591:11597-11616 | MS.gene22777:intron | 20.0% |
| !!! | GTTTTATATTTCACTTTGAA+CGG | + | 50591:13020-13039 | MS.gene22777:intron | 20.0% |
| !!! | TAAATCTTTTTTCAGGTAAA+TGG | - | 50591:11471-11490 | None:intergenic | 20.0% |
| !!! | TGAGGATATATTTTGAAATA+AGG | + | 50591:11596-11615 | MS.gene22777:intron | 20.0% |
| !!! | TTCTCATTGGTTAAAAATTA+TGG | - | 50591:11944-11963 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTCAGATTGAAAT+GGG | + | 50591:11500-11519 | MS.gene22777:intron | 20.0% |
| !!! | TTTTTCTTTTCAGATTGAAA+TGG | + | 50591:11499-11518 | MS.gene22777:intron | 20.0% |
| !!! | TTTTTGCTTATATTTTAGGA+CGG | - | 50591:11781-11800 | None:intergenic | 20.0% |
| ! | AAATCACTACTATAAACTGT+AGG | + | 50591:10999-11018 | MS.gene22777:intron | 25.0% |
| ! | ACATCTTGTAAAATAAGCTA+TGG | + | 50591:10842-10861 | MS.gene22777:CDS | 25.0% |
| ! | AGTCAAGATAATGTTAAAGT+TGG | + | 50591:10890-10909 | MS.gene22777:CDS | 25.0% |
| ! | CAATCTGAAAAGAAAAACTT+TGG | - | 50591:11496-11515 | None:intergenic | 25.0% |
| ! | CATTAAATGGCACATAAATA+TGG | - | 50591:10786-10805 | None:intergenic | 25.0% |
| ! | TAAGCTGTAATGATATTTCT+AGG | + | 50591:13127-13146 | MS.gene22777:CDS | 25.0% |
| ! | TCCAAGACATATAACAAAAA+CGG | + | 50591:10738-10757 | MS.gene22777:CDS | 25.0% |
| ! | TTAGATATTCAGTTCTGTTT+CGG | - | 50591:13236-13255 | None:intergenic | 25.0% |
| ! | TTATATATGTACCATAGGTT+TGG | - | 50591:10634-10653 | None:intergenic | 25.0% |
| ! | TTGAGGACATATATATCAAA+GGG | - | 50591:12988-13007 | None:intergenic | 25.0% |
| ! | TTTACTGTCATATTTGATAC+CGG | + | 50591:10539-10558 | MS.gene22777:CDS | 25.0% |
| !! | AGAAATTACTTAGACTTTTG+AGG | + | 50591:11578-11597 | MS.gene22777:intron | 25.0% |
| !! | AGTACCTTTGAAGAATTATA+TGG | + | 50591:10469-10488 | MS.gene22777:CDS | 25.0% |
| !! | ATGATGGAACAAAATCTTAT+CGG | + | 50591:11266-11285 | MS.gene22777:CDS | 25.0% |
| !! | TTTCAGGTAAATGGTTTAAT+TGG | - | 50591:11462-11481 | None:intergenic | 25.0% |
| !! | TTTCAGTATATTCTAAGAAC+CGG | + | 50591:13349-13368 | MS.gene22777:intron | 25.0% |
| !! | TTTTGTCAATGAGAAAGTTT+AGG | + | 50591:12715-12734 | MS.gene22777:intron | 25.0% |
| !!! | ATAATTTTTTGTGTTCTCCT+TGG | - | 50591:11997-12016 | None:intergenic | 25.0% |
| !!! | TAGTATGGATGCTTTTAAAA+TGG | + | 50591:10379-10398 | MS.gene22777:CDS | 25.0% |
| !!! | TTATTTTTAGGTGTTTGTGA+AGG | + | 50591:12120-12139 | MS.gene22777:intron | 25.0% |
| !!! | TTTGGTGTAAATCTTTTTTC+AGG | - | 50591:11478-11497 | None:intergenic | 25.0% |
| AAACTTGAAACATACCATAC+TGG | - | 50591:11129-11148 | None:intergenic | 30.0% | |
| AACCAATACTTAGTGATTTG+AGG | - | 50591:12021-12040 | None:intergenic | 30.0% | |
| AAGATCAAACTCATTTAGGT+AGG | - | 50591:12485-12504 | None:intergenic | 30.0% | |
| ACTTACAGAAAAGTAACACT+TGG | - | 50591:10591-10610 | None:intergenic | 30.0% | |
| ATGATAGACCAGTAAATTGA+AGG | - | 50591:11229-11248 | None:intergenic | 30.0% | |
| ATTGAGTGCTTGAAAGAATT+TGG | + | 50591:11624-11643 | MS.gene22777:intron | 30.0% | |
| CCAGAATCAACTAAAACAAA+AGG | + | 50591:12922-12941 | MS.gene22777:CDS | 30.0% | |
| CTTGAGGACATATATATCAA+AGG | - | 50591:12989-13008 | None:intergenic | 30.0% | |
| GATCAAGATCAAACTCATTT+AGG | - | 50591:12489-12508 | None:intergenic | 30.0% | |
| GGAAAGTTTGATGGAATATT+TGG | + | 50591:11066-11085 | MS.gene22777:CDS | 30.0% | |
| GGTATCAAATATGACAGTAA+AGG | - | 50591:10540-10559 | None:intergenic | 30.0% | |
| GTTATAGAAGAACATACAGT+TGG | - | 50591:12192-12211 | None:intergenic | 30.0% | |
| TAAACTGTAGGATTTCATTG+AGG | + | 50591:11011-11030 | MS.gene22777:intron | 30.0% | |
| TACCTCAAATCACTAAGTAT+TGG | + | 50591:12016-12035 | MS.gene22777:intron | 30.0% | |
| TATATGGACGCTCAATATTT+CGG | + | 50591:10485-10504 | MS.gene22777:CDS | 30.0% | |
| TGCTTATAAAAAAAGACGGA+GGG | + | 50591:12069-12088 | MS.gene22777:intron | 30.0% | |
| TGTAAAATAAGCTATGGAAC+CGG | + | 50591:10848-10867 | MS.gene22777:CDS | 30.0% | |
| TTGACTTTACTTGGTTGTTA+TGG | + | 50591:12740-12759 | MS.gene22777:intron | 30.0% | |
| TTGCTTATAAAAAAAGACGG+AGG | + | 50591:12068-12087 | MS.gene22777:intron | 30.0% | |
| TTGTTTCATTGCACATCAAT+TGG | + | 50591:12631-12650 | MS.gene22777:intron | 30.0% | |
| TTTCCATGAAACTTATTCCA+AGG | + | 50591:11977-11996 | MS.gene22777:intron | 30.0% | |
| TTTGATGGAATATTTGGACT+TGG | + | 50591:11072-11091 | MS.gene22777:CDS | 30.0% | |
| ! | AGAATTTGGAATTTGGTACA+AGG | + | 50591:11638-11657 | MS.gene22777:intron | 30.0% |
| ! | AGGGAGTATACTTAATACAT+TGG | - | 50591:11758-11777 | None:intergenic | 30.0% |
| ! | GCTTGAAAGAATTTGGAATT+TGG | + | 50591:11631-11650 | MS.gene22777:intron | 30.0% |
| ! | GGAGATAAATTAGTTTGATC+AGG | + | 50591:11432-11451 | MS.gene22777:intron | 30.0% |
| ! | TGAGTTTTTCTGTTGATCAT+TGG | + | 50591:13061-13080 | MS.gene22777:intron | 30.0% |
| !! | AAGGAAGTTGTTTCTCAATA+TGG | + | 50591:12336-12355 | MS.gene22777:CDS | 30.0% |
| !! | ACCGTTTTTGTTATATGTCT+TGG | - | 50591:10742-10761 | None:intergenic | 30.0% |
| !! | AGTTTCAACTAGTCTTTGTT+TGG | + | 50591:11144-11163 | MS.gene22777:intron | 30.0% |
| !! | TCAATATGGAGAGTTGATAT+GGG | + | 50591:12350-12369 | MS.gene22777:CDS | 30.0% |
| !!! | CCTTTTGTTTTAGTTGATTC+TGG | - | 50591:12925-12944 | None:intergenic | 30.0% |
| !!! | GAAATGGGAGATTTTTTCAT+TGG | + | 50591:11515-11534 | MS.gene22777:CDS | 30.0% |
| !!! | GTTTTCCTTTGAAATGCTTA+GGG | - | 50591:11370-11389 | None:intergenic | 30.0% |
| !!! | TGTTTTCCTTTGAAATGCTT+AGG | - | 50591:11371-11390 | None:intergenic | 30.0% |
| AAAACTACAACTTGAGCTTG+AGG | - | 50591:13005-13024 | None:intergenic | 35.0% | |
| AAAAGAAAGACTTCCTTCTC+GGG | - | 50591:11040-11059 | None:intergenic | 35.0% | |
| AAATCACAGGTACAACATGA+TGG | + | 50591:11250-11269 | MS.gene22777:intron | 35.0% | |
| AACACAGAACTTCATAGAGA+AGG | - | 50591:12406-12425 | None:intergenic | 35.0% | |
| AACATAGAGGTGAATATGCA+CGG | - | 50591:11712-11731 | None:intergenic | 35.0% | |
| AATATGACAGTAAAGGTCTG+TGG | - | 50591:10533-10552 | None:intergenic | 35.0% | |
| ACAAAATCTTATCGGTGAGA+AGG | + | 50591:11274-11293 | MS.gene22777:CDS | 35.0% | |
| ACCTCTAGATCTTCATAGTA+TGG | + | 50591:10364-10383 | MS.gene22777:CDS | 35.0% | |
| ACTAAAACAAAAGGCAACCA+AGG | + | 50591:12931-12950 | MS.gene22777:CDS | 35.0% | |
| AGGAAAACACACTTATGTTC+CGG | + | 50591:11382-11401 | MS.gene22777:CDS | 35.0% | |
| ATAGTTGAATACTCTCTCCT+TGG | - | 50591:12951-12970 | None:intergenic | 35.0% | |
| ATATGACAGTAAAGGTCTGT+GGG | - | 50591:10532-10551 | None:intergenic | 35.0% | |
| ATCTGACAAGAAGAACACAA+AGG | - | 50591:12887-12906 | None:intergenic | 35.0% | |
| CAAAAGCAATAAACCCACTA+AGG | - | 50591:13396-13415 | None:intergenic | 35.0% | |
| CGCTCTTATATATGTACCAT+AGG | - | 50591:10639-10658 | None:intergenic | 35.0% | |
| CTATACCCATAATTGGTACA+AGG | + | 50591:10707-10726 | MS.gene22777:CDS | 35.0% | |
| CTGGTCTATCATAAAATCAC+AGG | + | 50591:11237-11256 | MS.gene22777:intron | 35.0% | |
| CTTTGCCTTGTACCAATTAT+GGG | - | 50591:10715-10734 | None:intergenic | 35.0% | |
| GAAAAGAAAGACTTCCTTCT+CGG | - | 50591:11041-11060 | None:intergenic | 35.0% | |
| GAAAAGTAACACTTGGATGA+TGG | - | 50591:10584-10603 | None:intergenic | 35.0% | |
| GAAGTAACCAGATATTGATC+CGG | - | 50591:10870-10889 | None:intergenic | 35.0% | |
| GATTGAGATGGTTACTGAAA+AGG | + | 50591:12832-12851 | MS.gene22777:CDS | 35.0% | |
| GCGTCCATATAATTCTTCAA+AGG | - | 50591:10476-10495 | None:intergenic | 35.0% | |
| GCTTCATCTTCAACATAAAC+TGG | + | 50591:10954-10973 | MS.gene22777:intron | 35.0% | |
| GTTTAGGTCTTGACTTTACT+TGG | + | 50591:12731-12750 | MS.gene22777:intron | 35.0% | |
| TATCTAAAGATCGAGACTAG+TGG | + | 50591:13283-13302 | MS.gene22777:intron | 35.0% | |
| TATGTTCCGGTTACTGAAAA+AGG | + | 50591:11395-11414 | MS.gene22777:CDS | 35.0% | |
| TATTCAGTTCTGTTTCGGAA+AGG | - | 50591:13231-13250 | None:intergenic | 35.0% | |
| TCCATACTATGAAGATCTAG+AGG | - | 50591:10368-10387 | None:intergenic | 35.0% | |
| TCTCCTTGGAATAAGTTTCA+TGG | - | 50591:11983-12002 | None:intergenic | 35.0% | |
| TCTTTGCCTTGTACCAATTA+TGG | - | 50591:10716-10735 | None:intergenic | 35.0% | |
| TGGTTGTTATGGAACATTTC+TGG | + | 50591:12751-12770 | MS.gene22777:intron | 35.0% | |
| TTGTCAGATGCTTGTTCTTT+GGG | + | 50591:12898-12917 | MS.gene22777:CDS | 35.0% | |
| ! | AGAAGGAAGTCTTTCTTTTC+TGG | + | 50591:11041-11060 | MS.gene22777:CDS | 35.0% |
| ! | CACAACATGTCACTCTAAAA+TGG | - | 50591:11193-11212 | None:intergenic | 35.0% |
| ! | TATATTCTAAGAACCGGAGA+AGG | + | 50591:13355-13374 | MS.gene22777:CDS | 35.0% |
| !! | CTCAATATGGAGAGTTGATA+TGG | + | 50591:12349-12368 | MS.gene22777:CDS | 35.0% |
| !!! | ATGGGAGATTTTTTCATTGG+AGG | + | 50591:11518-11537 | MS.gene22777:CDS | 35.0% |
| !!! | CAGTAACCTTTTTCAGTAAC+CGG | - | 50591:11404-11423 | None:intergenic | 35.0% |
| !!! | TGCTTATATTTTAGGACGGA+GGG | - | 50591:11777-11796 | None:intergenic | 35.0% |
| !!! | TGTTCTCTTTTTGGCTCAAT+GGG | + | 50591:11297-11316 | MS.gene22777:CDS | 35.0% |
| !!! | TTGCTTATATTTTAGGACGG+AGG | - | 50591:11778-11797 | None:intergenic | 35.0% |
| !!! | TTTTTAGGTGTTTGTGAAGG+TGG | + | 50591:12123-12142 | MS.gene22777:intron | 35.0% |
| AAAAAGGTTACTGGCAGGTT+AGG | + | 50591:11411-11430 | MS.gene22777:intron | 40.0% | |
| AAACAATGGAAGCAGACAGT+AGG | - | 50591:12596-12615 | None:intergenic | 40.0% | |
| AACAATGGAAGCAGACAGTA+GGG | - | 50591:12595-12614 | None:intergenic | 40.0% | |
| AACTCTTGTCTCCAAACCTA+TGG | + | 50591:10620-10639 | MS.gene22777:intron | 40.0% | |
| AATCCTAATGCGAAAAAGGG+TGG | + | 50591:11320-11339 | MS.gene22777:CDS | 40.0% | |
| ACCAATTCTCATCATCCCAA+AGG | - | 50591:10333-10352 | None:intergenic | 40.0% | |
| AGAACTTCATAGAGAAGGCA+GGG | - | 50591:12401-12420 | None:intergenic | 40.0% | |
| AGACCAGTAAATTGAAGGCA+CGG | - | 50591:11224-11243 | None:intergenic | 40.0% | |
| AGAGAACAACAGCTAAGATC+AGG | + | 50591:10404-10423 | MS.gene22777:CDS | 40.0% | |
| ATATGGGATCTCCTAGTATC+AGG | + | 50591:12366-12385 | MS.gene22777:CDS | 40.0% | |
| ATTTAGGTAGGTCCAAAGAG+TGG | - | 50591:12473-12492 | None:intergenic | 40.0% | |
| CACTTTGTTACTCGTTGATC+AGG | + | 50591:10818-10837 | MS.gene22777:intron | 40.0% | |
| CCAAACATTTCCTTCACGAT+CGG | + | 50591:13153-13172 | MS.gene22777:CDS | 40.0% | |
| CGGTTACTGAAAAAGGTTAC+TGG | + | 50591:11402-11421 | MS.gene22777:CDS | 40.0% | |
| CTGACCTATTAGATTGATCC+CGG | - | 50591:12564-12583 | None:intergenic | 40.0% | |
| CTTGTCAGATGCTTGTTCTT+TGG | + | 50591:12897-12916 | MS.gene22777:CDS | 40.0% | |
| GACTTATGTGCAAGCATCAT+TGG | - | 50591:10434-10453 | None:intergenic | 40.0% | |
| GCTGAAATCAACCATGCTAT+TGG | + | 50591:12285-12304 | MS.gene22777:CDS | 40.0% | |
| GGGAATCCTAATGCGAAAAA+GGG | + | 50591:11317-11336 | MS.gene22777:CDS | 40.0% | |
| GTACCAATTATGGGTATAGC+AGG | - | 50591:10706-10725 | None:intergenic | 40.0% | |
| GTTGACCCTAAGCATTTCAA+AGG | + | 50591:11362-11381 | MS.gene22777:CDS | 40.0% | |
| TACTGAAAAAGGTTACTGGC+AGG | + | 50591:11406-11425 | MS.gene22777:CDS | 40.0% | |
| TATGACAGTAAAGGTCTGTG+GGG | - | 50591:10531-10550 | None:intergenic | 40.0% | |
| TATGGAACCGGATCAATATC+TGG | + | 50591:10860-10879 | MS.gene22777:CDS | 40.0% | |
| TATGGGATCTCCTAGTATCA+GGG | + | 50591:12367-12386 | MS.gene22777:CDS | 40.0% | |
| TATTTCGGTGAGATCGCAAT+TGG | + | 50591:10500-10519 | MS.gene22777:CDS | 40.0% | |
| TGAGTTTGATCTTGATCTGC+AGG | + | 50591:12492-12511 | MS.gene22777:intron | 40.0% | |
| TGATCAACTTTAGCCTGTTG+TGG | + | 50591:12263-12282 | MS.gene22777:intron | 40.0% | |
| TGGGAATCCTAATGCGAAAA+AGG | + | 50591:11316-11335 | MS.gene22777:CDS | 40.0% | |
| TTCATTGGAGGTTTGTCAAC+AGG | + | 50591:11530-11549 | MS.gene22777:CDS | 40.0% | |
| TTGAAAGAGCTTTGCCAGTA+TGG | + | 50591:11112-11131 | MS.gene22777:CDS | 40.0% | |
| TTGCCTGCTATACCCATAAT+TGG | + | 50591:10700-10719 | MS.gene22777:CDS | 40.0% | |
| TTTCCGTGCCTTCAATTTAC+TGG | + | 50591:11218-11237 | MS.gene22777:intron | 40.0% | |
| TTTGATGTTCCTCCTCCAAA+GGG | + | 50591:13412-13431 | MS.gene22777:CDS | 40.0% | |
| ! | TTTCTGGCAGGAAAGTTTGA+TGG | + | 50591:11057-11076 | MS.gene22777:CDS | 40.0% |
| ! | TTTTGATGTTCCTCCTCCAA+AGG | + | 50591:13411-13430 | MS.gene22777:CDS | 40.0% |
| !! | AATTCTATTTCTGGCAGTGC+TGG | + | 50591:12809-12828 | MS.gene22777:intron | 40.0% |
| !! | ACAGCTTATCACTGATTCAC+CGG | - | 50591:13115-13134 | None:intergenic | 40.0% |
| !! | AGTTCTGAGTGTAGAATGCA+AGG | + | 50591:12317-12336 | MS.gene22777:CDS | 40.0% |
| !! | ATTCTATTTCTGGCAGTGCT+GGG | + | 50591:12810-12829 | MS.gene22777:intron | 40.0% |
| !! | TCCTTTGGGATGATGAGAAT+TGG | + | 50591:10329-10348 | MS.gene22777:CDS | 40.0% |
| !!! | AAGGGTGGTGAATTGGTTTT+TGG | + | 50591:11335-11354 | MS.gene22777:CDS | 40.0% |
| !!! | GTGAGAAGGTGTTCTCTTTT+TGG | + | 50591:11288-11307 | MS.gene22777:CDS | 40.0% |
| !!! | GTGTTCTCTTTTTGGCTCAA+TGG | + | 50591:11296-11315 | MS.gene22777:CDS | 40.0% |
| AAAGGAGAAGGAAGGAAGCA+GGG | - | 50591:10315-10334 | None:intergenic | 45.0% | |
| AACCATGCTATTGGAGCTGA+AGG | + | 50591:12294-12313 | MS.gene22777:CDS | 45.0% | |
| AACCCAAAGGTTGGAACTAC+CGG | - | 50591:10561-10580 | None:intergenic | 45.0% | |
| ACCTATTAGATTGATCCCGG+CGG | - | 50591:12561-12580 | None:intergenic | 45.0% | |
| ACTTGTGAACATACGTCACC+AGG | - | 50591:12523-12542 | None:intergenic | 45.0% | |
| ATACCGGTAGTTCCAACCTT+TGG | + | 50591:10555-10574 | MS.gene22777:CDS | 45.0% | |
| ATCATCCCAAAGGAGAAGGA+AGG | - | 50591:10323-10342 | None:intergenic | 45.0% | |
| ATGACAGTAAAGGTCTGTGG+GGG | - | 50591:10530-10549 | None:intergenic | 45.0% | |
| ATGGGATCTCCTAGTATCAG+GGG | + | 50591:12368-12387 | MS.gene22777:CDS | 45.0% | |
| ATTACACAGGTCTGCCTTAG+TGG | + | 50591:13379-13398 | MS.gene22777:CDS | 45.0% | |
| CAAAGAGTGGAAATGCAAGC+GGG | - | 50591:12460-12479 | None:intergenic | 45.0% | |
| CAGAACTTCATAGAGAAGGC+AGG | - | 50591:12402-12421 | None:intergenic | 45.0% | |
| CAGTTCTGTTGTCAAGCATC+AGG | + | 50591:10913-10932 | MS.gene22777:CDS | 45.0% | |
| CCAAAGAGTGGAAATGCAAG+CGG | - | 50591:12461-12480 | None:intergenic | 45.0% | |
| CCGATCGTGAAGGAAATGTT+TGG | - | 50591:13156-13175 | None:intergenic | 45.0% | |
| CGGGATCAATCTAATAGGTC+AGG | + | 50591:12562-12581 | MS.gene22777:intron | 45.0% | |
| CTTGATCTGCAGGTAAAACC+TGG | + | 50591:12502-12521 | MS.gene22777:intron | 45.0% | |
| GAAATGATAACAGGCTGCTG+CGG | - | 50591:12438-12457 | None:intergenic | 45.0% | |
| GGTGACGTATGTTCACAAGT+TGG | + | 50591:12523-12542 | MS.gene22777:CDS | 45.0% | |
| GTTTCGGAAAGGTAGCTAGT+AGG | - | 50591:13220-13239 | None:intergenic | 45.0% | |
| TACCGGTAGTTCCAACCTTT+GGG | + | 50591:10556-10575 | MS.gene22777:CDS | 45.0% | |
| TAGGTAATCCGAACCTGTTC+TGG | - | 50591:13201-13220 | None:intergenic | 45.0% | |
| TCAGGAACATCTTTGCTTGC+TGG | + | 50591:12165-12184 | MS.gene22777:CDS | 45.0% | |
| TCTCATCATCCCAAAGGAGA+AGG | - | 50591:10327-10346 | None:intergenic | 45.0% | |
| TGCAAGCGGGAAATGATAAC+AGG | - | 50591:12447-12466 | None:intergenic | 45.0% | |
| TGCGAAAAAGGGTGGTGAAT+TGG | + | 50591:11328-11347 | MS.gene22777:CDS | 45.0% | |
| TGCTTCCTTCCTTCTCCTTT+GGG | + | 50591:10315-10334 | MS.gene22777:CDS | 45.0% | |
| TGTTGTGGCGTTCTGTTTGT+TGG | + | 50591:10277-10296 | MS.gene22777:CDS | 45.0% | |
| TTACACAGGTCTGCCTTAGT+GGG | + | 50591:13380-13399 | MS.gene22777:CDS | 45.0% | |
| TTGGTTTATGTTCCATCCGC+CGG | + | 50591:12542-12561 | MS.gene22777:CDS | 45.0% | |
| ! | GGGGCAAACACATTTTGTTG+TGG | + | 50591:10262-10281 | MS.gene22777:CDS | 45.0% |
| ! | TGGTTGATTTCAGCCACAAC+AGG | - | 50591:12279-12298 | None:intergenic | 45.0% |
| !! | ACTTGGATGATGGAACCCAA+AGG | - | 50591:10574-10593 | None:intergenic | 45.0% |
| !! | CTTATCACTGATTCACCGGA+TGG | - | 50591:13111-13130 | None:intergenic | 45.0% |
| !! | GGAAGTCTTTCTTTTCTGGC+AGG | + | 50591:11045-11064 | MS.gene22777:CDS | 45.0% |
| !! | TCACCACCCTTTTTCGCATT+AGG | - | 50591:11326-11345 | None:intergenic | 45.0% |
| !!! | GGTGGTGAATTGGTTTTTGG+TGG | + | 50591:11338-11357 | MS.gene22777:CDS | 45.0% |
| ATTAGATTGATCCCGGCGGA+TGG | - | 50591:12557-12576 | None:intergenic | 50.0% | |
| CAAAGGAGAAGGAAGGAAGC+AGG | - | 50591:10316-10335 | None:intergenic | 50.0% | |
| CCGCTTGCATTTCCACTCTT+TGG | + | 50591:12458-12477 | MS.gene22777:intron | 50.0% | |
| CTCCTTCAGCTCCAATAGCA+TGG | - | 50591:12299-12318 | None:intergenic | 50.0% | |
| CTGCTTCCTTCCTTCTCCTT+TGG | + | 50591:10314-10333 | MS.gene22777:CDS | 50.0% | |
| GACCTGTGTAATGCCTTCTC+CGG | - | 50591:13371-13390 | None:intergenic | 50.0% | |
| GAGAGTCTTCCAAGTCCATC+CGG | + | 50591:13093-13112 | MS.gene22777:CDS | 50.0% | |
| GGAAGCTTACCCCTGATACT+AGG | - | 50591:12380-12399 | None:intergenic | 50.0% | |
| TCCGCCGGGATCAATCTAAT+AGG | + | 50591:12557-12576 | MS.gene22777:CDS | 50.0% | |
| TCCTCACACCAGAACAGGTT+CGG | + | 50591:13190-13209 | MS.gene22777:intron | 50.0% | |
| TGGTTTATGTTCCATCCGCC+GGG | + | 50591:12543-12562 | MS.gene22777:CDS | 50.0% | |
| TGTTCTGGTGTGAGGACGAA+GGG | - | 50591:13186-13205 | None:intergenic | 50.0% | |
| TTCATTGAGGCTACCCGAGA+AGG | + | 50591:11024-11043 | MS.gene22777:CDS | 50.0% | |
| ! | ACTGATTCACCGGATGGACT+TGG | - | 50591:13105-13124 | None:intergenic | 50.0% |
| ! | AGGTACTGTAGCTTCATCGC+TGG | - | 50591:10456-10475 | None:intergenic | 50.0% |
| ! | GGGTTTGTTTCCGATCGTGA+AGG | - | 50591:13166-13185 | None:intergenic | 50.0% |
| ! | TGTGCTGCTATTGTGGACTC+AGG | + | 50591:12147-12166 | MS.gene22777:CDS | 50.0% |
| !! | AACCGGAGAAGGCATTACAC+AGG | + | 50591:13366-13385 | MS.gene22777:CDS | 50.0% |
| !! | GGATGATGGAACCCAAAGGT+TGG | - | 50591:10570-10589 | None:intergenic | 50.0% |
| CTGTTCTGGTGTGAGGACGA+AGG | - | 50591:13187-13206 | None:intergenic | 55.0% | |
| CTTCGTCCTCACACCAGAAC+AGG | + | 50591:13185-13204 | MS.gene22777:CDS | 55.0% | |
| TCCGAACCTGTTCTGGTGTG+AGG | - | 50591:13194-13213 | None:intergenic | 55.0% | |
| ! | AGGTGGCTGTGCTGCTATTG+TGG | + | 50591:12140-12159 | MS.gene22777:CDS | 55.0% |
| ! | TGGCAGTGCTGGGATTGAGA+TGG | + | 50591:12820-12839 | MS.gene22777:intron | 55.0% |
| ! | CAGAGTGGACCCTTTGGAGG+AGG | - | 50591:13424-13443 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 50591 | gene | 10260 | 13443 | 10260 | ID=MS.gene22777 |
| 50591 | mRNA | 10260 | 13443 | 10260 | ID=MS.gene22777.t1;Parent=MS.gene22777 |
| 50591 | exon | 10260 | 10604 | 10260 | ID=MS.gene22777.t1.exon1;Parent=MS.gene22777.t1 |
| 50591 | CDS | 10260 | 10604 | 10260 | ID=cds.MS.gene22777.t1;Parent=MS.gene22777.t1 |
| 50591 | exon | 10699 | 10759 | 10699 | ID=MS.gene22777.t1.exon2;Parent=MS.gene22777.t1 |
| 50591 | CDS | 10699 | 10759 | 10699 | ID=cds.MS.gene22777.t1;Parent=MS.gene22777.t1 |
| 50591 | exon | 10840 | 10934 | 10840 | ID=MS.gene22777.t1.exon3;Parent=MS.gene22777.t1 |
| 50591 | CDS | 10840 | 10934 | 10840 | ID=cds.MS.gene22777.t1;Parent=MS.gene22777.t1 |
| 50591 | exon | 11021 | 11133 | 11021 | ID=MS.gene22777.t1.exon4;Parent=MS.gene22777.t1 |
| 50591 | CDS | 11021 | 11133 | 11021 | ID=cds.MS.gene22777.t1;Parent=MS.gene22777.t1 |
| 50591 | exon | 11259 | 11427 | 11259 | ID=MS.gene22777.t1.exon5;Parent=MS.gene22777.t1 |
| 50591 | CDS | 11259 | 11427 | 11259 | ID=cds.MS.gene22777.t1;Parent=MS.gene22777.t1 |
| 50591 | exon | 11512 | 11551 | 11512 | ID=MS.gene22777.t1.exon6;Parent=MS.gene22777.t1 |
| 50591 | CDS | 11512 | 11551 | 11512 | ID=cds.MS.gene22777.t1;Parent=MS.gene22777.t1 |
| 50591 | exon | 12130 | 12194 | 12130 | ID=MS.gene22777.t1.exon7;Parent=MS.gene22777.t1 |
| 50591 | CDS | 12130 | 12194 | 12130 | ID=cds.MS.gene22777.t1;Parent=MS.gene22777.t1 |
| 50591 | exon | 12276 | 12389 | 12276 | ID=MS.gene22777.t1.exon8;Parent=MS.gene22777.t1 |
| 50591 | CDS | 12276 | 12389 | 12276 | ID=cds.MS.gene22777.t1;Parent=MS.gene22777.t1 |
| 50591 | exon | 12514 | 12578 | 12514 | ID=MS.gene22777.t1.exon9;Parent=MS.gene22777.t1 |
| 50591 | CDS | 12514 | 12578 | 12514 | ID=cds.MS.gene22777.t1;Parent=MS.gene22777.t1 |
| 50591 | exon | 12826 | 12979 | 12826 | ID=MS.gene22777.t1.exon10;Parent=MS.gene22777.t1 |
| 50591 | CDS | 12826 | 12979 | 12826 | ID=cds.MS.gene22777.t1;Parent=MS.gene22777.t1 |
| 50591 | exon | 13087 | 13206 | 13087 | ID=MS.gene22777.t1.exon11;Parent=MS.gene22777.t1 |
| 50591 | CDS | 13087 | 13206 | 13087 | ID=cds.MS.gene22777.t1;Parent=MS.gene22777.t1 |
| 50591 | exon | 13355 | 13443 | 13355 | ID=MS.gene22777.t1.exon12;Parent=MS.gene22777.t1 |
| 50591 | CDS | 13355 | 13443 | 13355 | ID=cds.MS.gene22777.t1;Parent=MS.gene22777.t1 |
| Gene Sequence |
| Protein sequence |
