AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene056687


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056687.t1 MTR_4g069500 99.042 522 5 0 1 522 1 522 0.0 1049
MS.gene056687.t1 MTR_4g069500 98.941 472 5 0 51 522 1 472 0.0 944
MS.gene056687.t1 MTR_3g116240 81.967 488 86 1 13 498 11 498 0.0 827
MS.gene056687.t1 MTR_4g072030 74.904 522 124 3 1 522 1 515 0.0 790
MS.gene056687.t1 MTR_4g069500 99.399 333 2 0 190 522 1 333 0.0 669
MS.gene056687.t1 MTR_8g077890 59.877 486 191 3 27 510 16 499 0.0 583
MS.gene056687.t1 MTR_5g075300 56.584 486 206 3 25 508 14 496 0.0 573
MS.gene056687.t1 MTR_6g088450 53.196 485 215 2 2 483 27 502 0.0 527
MS.gene056687.t1 MTR_2g013310 52.024 494 216 5 22 515 45 517 1.03e-176 508
MS.gene056687.t1 MTR_8g103500 52.473 465 213 2 27 491 15 471 2.16e-166 481
MS.gene056687.t1 MTR_7g446340 47.732 507 244 6 12 517 41 527 2.45e-163 474
MS.gene056687.t1 MTR_6g007340 47.732 507 244 6 12 517 41 527 2.45e-163 474
MS.gene056687.t1 MTR_2g013310 51.613 465 204 5 51 515 1 444 5.84e-163 470
MS.gene056687.t1 MTR_5g019870 47.590 498 241 5 27 519 12 494 3.04e-158 460
MS.gene056687.t1 MTR_3g084110 30.847 496 313 9 20 508 16 488 2.56e-72 238
MS.gene056687.t1 MTR_1g116660 31.837 490 300 11 17 497 20 484 3.83e-71 236
MS.gene056687.t1 MTR_7g005910 30.159 504 320 10 17 510 18 499 3.66e-70 233
MS.gene056687.t1 MTR_1g116650 30.382 497 300 8 17 502 63 524 7.55e-69 230
MS.gene056687.t1 MTR_4g077740 31.755 507 298 15 9 489 14 498 2.29e-68 228
MS.gene056687.t1 MTR_7g082270 31.546 485 295 12 11 488 45 499 3.56e-60 207
MS.gene056687.t1 MTR_3g074410 29.200 500 305 11 34 507 29 505 3.64e-60 207
MS.gene056687.t1 MTR_5g006070 29.134 508 309 11 32 513 25 507 1.59e-58 202
MS.gene056687.t1 MTR_0009s0370 28.952 525 321 13 20 515 10 511 6.16e-58 201
MS.gene056687.t1 MTR_6g018790 31.317 463 274 11 36 488 111 539 1.52e-57 201
MS.gene056687.t1 MTR_5g006070 29.825 456 291 8 63 513 28 459 1.93e-57 198
MS.gene056687.t1 MTR_3g023480 29.868 529 321 11 11 508 2 511 4.39e-57 198
MS.gene056687.t1 MTR_5g020270 28.542 487 312 10 12 491 31 488 3.71e-56 196
MS.gene056687.t1 MTR_5g077580 28.036 560 272 12 26 488 22 547 1.29e-54 193
MS.gene056687.t1 MTR_7g094450 28.660 485 306 9 12 490 22 472 3.13e-54 190
MS.gene056687.t1 MTR_5g041550 27.647 510 320 10 28 510 22 509 3.20e-54 191
MS.gene056687.t1 MTR_1g104750 28.834 489 301 12 32 497 26 490 8.16e-54 189
MS.gene056687.t1 MTR_1g038600 29.191 507 321 9 1 499 1 477 1.26e-53 189
MS.gene056687.t1 MTR_3g074390 28.340 494 313 8 34 505 32 506 1.92e-53 189
MS.gene056687.t1 MTR_3g008160 26.415 530 341 11 6 513 3 505 2.75e-53 188
MS.gene056687.t1 MTR_8g077310 27.273 462 307 8 33 491 50 485 4.29e-53 187
MS.gene056687.t1 MTR_1g104780 28.090 534 324 11 19 521 11 515 4.42e-53 188
MS.gene056687.t1 MTR_1g104770 27.291 491 310 9 34 497 27 497 4.98e-53 187
MS.gene056687.t1 MTR_4g090600 28.630 489 298 11 34 496 27 490 5.06e-53 187
MS.gene056687.t1 MTR_0204s0020 28.454 485 306 9 31 495 23 486 5.37e-53 187
MS.gene056687.t1 MTR_4g118610 28.484 488 312 9 10 491 30 486 1.13e-52 186
MS.gene056687.t1 MTR_7g082270 32.701 422 247 12 11 425 45 436 1.55e-52 185
MS.gene056687.t1 MTR_5g020270 30.476 420 251 10 81 491 1 388 2.76e-52 182
MS.gene056687.t1 MTR_0204s0020 28.423 482 307 9 31 495 23 483 3.21e-52 185
MS.gene056687.t1 MTR_1g022315 28.817 465 299 7 32 491 51 488 6.59e-52 184
MS.gene056687.t1 MTR_2g049020 32.500 360 223 6 26 382 22 364 7.08e-52 186
MS.gene056687.t1 MTR_3g008170 27.096 513 333 10 21 510 13 507 1.23e-51 184
MS.gene056687.t1 MTR_7g113970 29.103 457 296 7 35 491 67 495 1.39e-51 183
MS.gene056687.t1 MTR_1g038630 27.599 529 327 10 1 503 1 499 1.57e-51 184
MS.gene056687.t1 MTR_8g077300 27.291 502 310 10 16 491 5 477 2.62e-51 182
MS.gene056687.t1 MTR_3g008160 28.082 438 290 7 78 513 42 456 3.99e-51 181
MS.gene056687.t1 MTR_4g091370 27.403 489 304 9 34 496 27 490 5.72e-51 182
MS.gene056687.t1 MTR_2g020710 29.913 458 278 9 41 490 60 482 5.98e-51 181
MS.gene056687.t1 MTR_5g082540 28.846 520 317 12 21 512 14 508 8.74e-51 181
MS.gene056687.t1 MTR_0204s0040 28.024 496 315 10 21 495 20 494 1.31e-50 181
MS.gene056687.t1 MTR_3g093010 27.146 501 317 10 31 506 23 500 1.85e-50 181
MS.gene056687.t1 MTR_3g093060 29.056 413 270 6 80 488 46 439 2.69e-50 179
MS.gene056687.t1 MTR_2g026160 31.856 361 233 4 22 379 19 369 6.12e-50 181
MS.gene056687.t1 MTR_2g026160 37.374 99 62 0 398 496 463 561 1.87e-14 76.6
MS.gene056687.t1 MTR_8g102860 27.096 513 323 13 29 512 26 516 9.44e-50 179
MS.gene056687.t1 MTR_4g116770 28.024 496 315 10 21 495 216 690 1.38e-49 181
MS.gene056687.t1 MTR_2g020710 30.425 424 252 9 75 490 5 393 2.60e-49 175
MS.gene056687.t1 MTR_7g094110 28.392 479 315 7 12 490 24 474 3.91e-49 176
MS.gene056687.t1 MTR_8g102860 29.274 427 272 10 95 512 59 464 5.58e-49 176
MS.gene056687.t1 MTR_5g094760 27.419 496 314 10 23 495 20 492 1.09e-48 176
MS.gene056687.t1 MTR_4g116790 27.639 521 331 11 21 520 18 513 1.50e-48 176
MS.gene056687.t1 MTR_6g087040 24.950 497 332 9 31 506 28 504 1.64e-48 175
MS.gene056687.t1 MTR_6g088375 24.950 497 332 9 31 506 28 504 1.64e-48 175
MS.gene056687.t1 MTR_3g007910 26.884 491 305 11 31 507 23 473 2.45e-48 174
MS.gene056687.t1 MTR_7g091690 28.313 498 307 12 23 497 20 490 3.85e-48 174
MS.gene056687.t1 MTR_8g077310 27.578 417 267 9 81 491 1 388 1.22e-47 170
MS.gene056687.t1 MTR_1g022315 29.567 416 261 7 81 491 1 389 1.52e-47 170
MS.gene056687.t1 MTR_5g020270 27.010 485 301 10 12 491 31 467 3.33e-47 171
MS.gene056687.t1 MTR_2g048720 32.869 359 208 8 26 374 22 357 2.16e-46 171
MS.gene056687.t1 MTR_7g113960 28.238 471 300 9 41 507 38 474 2.27e-46 169
MS.gene056687.t1 MTR_3g074270 27.160 486 288 12 34 495 27 470 2.47e-44 163
MS.gene056687.t1 MTR_3g080240 28.151 476 289 13 30 490 93 530 9.16e-44 162
MS.gene056687.t1 MTR_2g026140 30.978 368 219 7 36 398 30 367 5.09e-41 155
MS.gene056687.t1 MTR_2g026140 36.364 99 63 0 398 496 448 546 6.52e-11 65.1
MS.gene056687.t1 MTR_4g064820 30.874 366 221 13 26 371 88 441 1.22e-40 153
MS.gene056687.t1 MTR_3g074370 30.973 339 207 7 176 508 21 338 4.05e-40 148
MS.gene056687.t1 MTR_2g020710 29.610 385 229 8 41 417 60 410 2.90e-39 148
MS.gene056687.t1 MTR_3g074320 29.970 337 213 6 176 508 21 338 3.41e-39 146
MS.gene056687.t1 MTR_3g074340 30.383 339 209 7 176 508 21 338 4.14e-39 145
MS.gene056687.t1 MTR_2g020710 29.688 384 228 8 41 416 60 409 5.11e-39 147
MS.gene056687.t1 MTR_6g087910 27.143 490 320 10 7 488 23 483 7.11e-39 148
MS.gene056687.t1 MTR_4g118610 27.778 414 263 8 10 417 30 413 9.02e-39 147
MS.gene056687.t1 MTR_7g094110 26.514 479 304 7 12 490 24 454 1.71e-38 147
MS.gene056687.t1 MTR_3g074380 27.606 355 220 6 34 369 30 366 5.29e-38 143
MS.gene056687.t1 MTR_8g077310 27.193 342 224 5 33 374 50 366 3.09e-37 142
MS.gene056687.t1 MTR_4g013205 26.994 489 318 9 6 488 14 469 2.28e-36 141
MS.gene056687.t1 MTR_3g116060 34.043 235 144 5 28 257 2 230 1.06e-32 133
MS.gene056687.t1 MTR_3g116060 29.167 240 154 6 272 502 496 728 1.14e-21 99.4
MS.gene056687.t1 MTR_7g113970 27.035 344 225 5 35 378 67 384 1.31e-32 129
MS.gene056687.t1 MTR_2g020710 28.070 342 205 7 41 374 60 368 8.56e-30 120
MS.gene056687.t1 MTR_4g116790 25.210 357 229 6 21 358 18 355 4.79e-29 119
MS.gene056687.t1 MTR_3g118530 36.098 205 121 5 41 239 15 215 8.81e-29 121
MS.gene056687.t1 MTR_3g118530 29.730 222 140 6 273 485 507 721 6.86e-23 103
MS.gene056687.t1 MTR_3g118530 36.098 205 121 5 41 239 15 215 1.21e-28 120
MS.gene056687.t1 MTR_7g113960 27.485 342 214 7 41 378 38 349 2.94e-28 116
MS.gene056687.t1 MTR_5g024740 33.005 203 128 4 34 231 8 207 1.03e-25 112
MS.gene056687.t1 MTR_5g024740 29.249 253 160 6 245 485 458 703 1.17e-17 86.7
MS.gene056687.t1 MTR_8g073100 31.527 203 131 5 34 231 8 207 2.42e-24 107
MS.gene056687.t1 MTR_8g073100 27.928 222 144 4 273 485 485 699 1.61e-18 89.4
MS.gene056687.t1 MTR_5g044910 31.527 203 131 4 34 231 8 207 5.49e-24 106
MS.gene056687.t1 MTR_5g044910 27.068 266 171 6 231 485 448 701 5.39e-18 87.8
MS.gene056687.t1 MTR_3g074400 25.000 424 244 12 81 481 44 416 8.82e-23 101
MS.gene056687.t1 MTR_2g081930 25.000 420 266 18 80 486 134 517 8.56e-13 71.2
MS.gene056687.t1 MTR_1g069935 24.453 548 305 22 11 487 2 511 1.69e-12 70.1
MS.gene056687.t1 MTR_5g096000 30.000 150 104 1 31 179 23 172 1.49e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene056687.t1 AT3G18830 72.565 503 135 3 20 519 26 528 0.0 756
MS.gene056687.t1 AT2G16120 67.617 491 156 3 23 511 19 508 0.0 685
MS.gene056687.t1 AT2G16130 67.360 481 155 2 23 501 19 499 0.0 675
MS.gene056687.t1 AT4G36670 57.526 485 205 1 21 504 8 492 0.0 576
MS.gene056687.t1 AT2G18480 58.542 480 195 3 13 491 7 483 0.0 557
MS.gene056687.t1 AT2G20780 49.004 502 236 6 8 506 34 518 1.97e-166 482
MS.gene056687.t1 AT2G20780 49.446 451 209 5 59 506 26 460 3.53e-148 433
MS.gene056687.t1 AT2G43330 31.928 498 312 8 6 497 5 481 2.48e-69 231
MS.gene056687.t1 AT5G59250 31.590 478 278 11 35 489 103 554 3.07e-65 221
MS.gene056687.t1 AT5G17010 31.225 506 294 15 13 489 20 500 7.13e-65 219
MS.gene056687.t1 AT5G17010 31.225 506 294 15 13 489 20 500 7.13e-65 219
MS.gene056687.t1 AT5G17010 31.225 506 294 15 13 489 20 500 7.13e-65 219
MS.gene056687.t1 AT1G50310 29.058 499 308 9 34 509 29 504 1.26e-62 213
MS.gene056687.t1 AT1G11260 28.460 513 319 11 31 519 25 513 1.25e-61 211
MS.gene056687.t1 AT3G19940 29.051 506 298 11 34 509 29 503 2.01e-60 207
MS.gene056687.t1 AT3G05150 30.632 506 302 10 7 500 8 476 2.45e-59 204
MS.gene056687.t1 AT3G03090 31.210 471 286 12 35 489 52 500 5.14e-59 203
MS.gene056687.t1 AT5G16150 32.265 499 289 12 5 488 75 539 1.00e-58 204
MS.gene056687.t1 AT5G16150 32.265 499 289 12 5 488 75 539 1.00e-58 204
MS.gene056687.t1 AT5G16150 32.265 499 289 12 5 488 75 539 1.00e-58 204
MS.gene056687.t1 AT5G27360 29.124 491 309 12 8 491 10 468 1.74e-58 201
MS.gene056687.t1 AT5G27360 29.124 491 309 12 8 491 58 516 4.05e-58 202
MS.gene056687.t1 AT3G05150 30.303 495 298 9 7 489 8 467 7.19e-58 199
MS.gene056687.t1 AT3G05150 30.303 495 298 9 7 489 8 467 7.19e-58 199
MS.gene056687.t1 AT5G23270 29.084 502 285 11 34 499 28 494 7.17e-57 198
MS.gene056687.t1 AT5G27350 29.175 497 309 11 1 490 3 463 1.44e-56 196
MS.gene056687.t1 AT3G05960 28.433 517 323 10 20 509 11 507 5.81e-55 192
MS.gene056687.t1 AT1G54730 30.065 459 283 10 41 494 43 468 6.65e-55 192
MS.gene056687.t1 AT1G75220 28.448 464 303 7 31 491 49 486 1.10e-54 191
MS.gene056687.t1 AT5G18840 28.659 492 311 9 7 490 18 477 4.08e-54 190
MS.gene056687.t1 AT3G19930 27.290 524 333 11 15 515 12 510 8.11e-54 190
MS.gene056687.t1 AT3G19930 27.290 524 333 11 15 515 12 510 8.11e-54 190
MS.gene056687.t1 AT5G26340 27.755 490 306 11 32 497 26 491 3.16e-53 188
MS.gene056687.t1 AT5G26250 28.185 518 327 11 14 510 10 503 3.93e-53 188
MS.gene056687.t1 AT1G34580 29.032 496 304 13 34 502 28 502 5.99e-53 187
MS.gene056687.t1 AT1G19450 28.017 464 305 7 31 491 50 487 8.95e-53 186
MS.gene056687.t1 AT4G21480 28.800 500 309 13 25 499 18 495 4.13e-52 185
MS.gene056687.t1 AT1G34580 30.930 430 268 10 81 502 44 452 4.81e-52 184
MS.gene056687.t1 AT3G05165 26.908 498 314 10 6 490 2 462 9.73e-52 183
MS.gene056687.t1 AT3G05165 26.908 498 314 10 6 490 2 462 9.73e-52 183
MS.gene056687.t1 AT3G05165 26.908 498 314 10 6 490 2 462 9.73e-52 183
MS.gene056687.t1 AT1G50310 31.536 371 228 7 142 509 14 361 5.62e-51 179
MS.gene056687.t1 AT3G05160 25.941 478 314 7 21 490 8 453 1.86e-49 177
MS.gene056687.t1 AT1G07340 28.654 520 327 12 9 507 2 498 4.10e-49 177
MS.gene056687.t1 AT5G27360 30.990 384 231 10 110 490 11 363 4.72e-49 173
MS.gene056687.t1 AT5G27360 30.990 384 231 10 110 490 11 363 4.72e-49 173
MS.gene056687.t1 AT1G30220 31.988 347 216 5 26 367 24 355 6.06e-49 178
MS.gene056687.t1 AT1G30220 31.356 118 75 1 398 509 463 580 9.98e-14 74.3
MS.gene056687.t1 AT2G48020 27.010 485 316 10 8 489 10 459 2.12e-48 174
MS.gene056687.t1 AT2G48020 27.010 485 316 10 8 489 10 459 2.12e-48 174
MS.gene056687.t1 AT1G08930 27.823 496 311 11 8 489 27 489 3.03e-48 174
MS.gene056687.t1 AT1G08930 27.823 496 311 11 8 489 27 489 3.03e-48 174
MS.gene056687.t1 AT4G02050 27.220 518 328 10 21 511 18 513 3.46e-48 174
MS.gene056687.t1 AT4G02050 27.220 518 328 10 21 511 18 513 3.46e-48 174
MS.gene056687.t1 AT1G05030 30.480 479 274 14 30 490 79 516 1.85e-47 173
MS.gene056687.t1 AT1G54730 30.000 410 250 9 41 445 43 420 2.58e-47 170
MS.gene056687.t1 AT1G77210 26.946 501 321 11 29 506 26 504 1.07e-46 170
MS.gene056687.t1 AT1G77210 26.946 501 321 11 29 506 26 504 1.07e-46 170
MS.gene056687.t1 AT3G05400 27.790 457 290 11 41 491 37 459 5.20e-46 167
MS.gene056687.t1 AT3G05160 26.667 435 283 6 60 490 2 404 8.48e-46 166
MS.gene056687.t1 AT3G05160 26.667 435 283 6 60 490 2 404 8.48e-46 166
MS.gene056687.t1 AT2G35740 30.471 361 236 7 29 385 25 374 1.22e-45 169
MS.gene056687.t1 AT2G35740 33.628 113 72 1 398 507 466 578 5.90e-14 75.1
MS.gene056687.t1 AT4G04750 27.273 440 282 13 58 491 64 471 1.61e-45 166
MS.gene056687.t1 AT4G04750 27.273 440 282 13 58 491 64 471 1.61e-45 166
MS.gene056687.t1 AT4G04750 27.273 440 282 13 58 491 108 515 2.72e-45 167
MS.gene056687.t1 AT1G54730 28.446 457 272 11 41 494 43 447 5.80e-45 164
MS.gene056687.t1 AT5G61520 25.686 510 331 10 25 506 19 508 6.00e-45 166
MS.gene056687.t1 AT4G16480 30.585 376 241 7 1 371 1 361 3.06e-44 165
MS.gene056687.t1 AT4G16480 35.345 116 71 1 398 509 467 582 1.02e-15 80.5
MS.gene056687.t1 AT4G16480 30.585 376 241 7 1 371 1 361 3.06e-44 165
MS.gene056687.t1 AT4G16480 35.345 116 71 1 398 509 467 582 1.02e-15 80.5
MS.gene056687.t1 AT4G16480 30.585 376 241 7 1 371 1 361 3.06e-44 165
MS.gene056687.t1 AT4G16480 35.345 116 71 1 398 509 467 582 1.02e-15 80.5
MS.gene056687.t1 AT4G04760 27.097 465 298 12 35 491 36 467 2.45e-43 160
MS.gene056687.t1 AT5G27360 28.471 425 266 11 8 425 10 403 3.04e-43 159
MS.gene056687.t1 AT5G61520 27.040 429 290 7 81 506 52 460 3.94e-43 160
MS.gene056687.t1 AT1G08890 26.096 479 321 8 21 494 13 463 4.37e-43 159
MS.gene056687.t1 AT4G04760 27.500 440 278 12 60 491 2 408 4.41e-43 158
MS.gene056687.t1 AT1G79820 30.444 473 286 13 28 491 52 490 1.21e-42 159
MS.gene056687.t1 AT1G79820 30.444 473 286 13 28 491 52 490 1.21e-42 159
MS.gene056687.t1 AT3G05400 30.127 395 235 12 104 491 79 439 2.01e-42 157
MS.gene056687.t1 AT3G05155 26.049 453 295 8 41 488 38 455 2.24e-42 157
MS.gene056687.t1 AT1G08900 26.638 473 316 9 22 494 12 453 4.96e-42 156
MS.gene056687.t1 AT3G05165 26.651 439 288 8 6 439 2 411 7.25e-42 156
MS.gene056687.t1 AT3G05165 26.651 439 288 8 6 439 2 411 7.25e-42 156
MS.gene056687.t1 AT1G05030 29.630 459 264 14 50 490 47 464 2.87e-41 155
MS.gene056687.t1 AT1G08900 26.569 478 318 9 22 494 12 461 2.90e-41 154
MS.gene056687.t1 AT1G08900 26.569 478 318 9 22 494 12 461 2.90e-41 154
MS.gene056687.t1 AT3G05165 26.651 439 288 8 6 439 2 411 3.45e-41 155
MS.gene056687.t1 AT1G67300 27.475 495 321 10 6 490 23 489 3.57e-41 155
MS.gene056687.t1 AT1G54730 29.319 382 233 9 41 417 43 392 3.57e-41 153
MS.gene056687.t1 AT1G54730 29.319 382 233 9 41 417 43 392 3.57e-41 153
MS.gene056687.t1 AT1G08900 27.231 437 290 8 58 494 11 419 9.44e-41 152
MS.gene056687.t1 AT1G67300 26.721 494 325 10 6 490 23 488 1.63e-39 150
MS.gene056687.t1 AT1G67300 26.721 494 325 10 6 490 23 488 1.63e-39 150
MS.gene056687.t1 AT5G17010 27.059 510 262 16 7 489 11 437 5.12e-39 148
MS.gene056687.t1 AT1G67300 26.984 441 285 10 6 437 23 435 4.28e-38 145
MS.gene056687.t1 AT1G67300 26.984 441 285 10 6 437 23 435 4.28e-38 145
MS.gene056687.t1 AT1G54730 28.186 408 239 10 41 445 43 399 1.20e-37 143
MS.gene056687.t1 AT1G79820 30.935 417 249 11 28 437 52 436 1.76e-37 144
MS.gene056687.t1 AT1G67300 26.852 432 279 10 6 428 23 426 2.33e-37 143
MS.gene056687.t1 AT1G67300 26.852 432 279 10 6 428 23 426 2.33e-37 143
MS.gene056687.t1 AT1G77210 27.151 372 247 7 138 506 5 355 6.52e-37 140
MS.gene056687.t1 AT3G20460 26.211 454 297 9 45 493 68 488 8.13e-37 142
MS.gene056687.t1 AT4G04760 25.591 465 302 13 35 491 36 464 7.88e-36 139
MS.gene056687.t1 AT3G51490 35.776 232 134 7 34 257 8 232 3.24e-34 137
MS.gene056687.t1 AT3G51490 28.682 258 165 7 244 491 472 720 7.05e-22 100
MS.gene056687.t1 AT3G51490 35.776 232 134 7 34 257 8 232 3.25e-34 137
MS.gene056687.t1 AT3G51490 27.165 254 166 7 244 491 472 712 1.43e-18 89.7
MS.gene056687.t1 AT1G54730 29.063 320 195 7 41 357 43 333 3.95e-34 132
MS.gene056687.t1 AT1G20840 36.364 209 123 4 28 231 2 205 1.57e-32 132
MS.gene056687.t1 AT1G20840 30.864 243 150 6 272 503 498 733 1.42e-18 89.7
MS.gene056687.t1 AT1G20840 36.364 209 123 4 28 231 2 205 1.57e-32 132
MS.gene056687.t1 AT1G20840 30.864 243 150 6 272 503 498 733 1.42e-18 89.7
MS.gene056687.t1 AT1G08920 25.926 459 294 13 41 490 43 464 3.79e-32 129
MS.gene056687.t1 AT1G54730 27.368 380 222 10 41 417 43 371 1.13e-31 126
MS.gene056687.t1 AT1G08900 26.340 429 284 8 22 445 12 413 1.43e-31 127
MS.gene056687.t1 AT2G48020 26.593 361 233 7 23 380 21 352 2.83e-31 125
MS.gene056687.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.29e-30 126
MS.gene056687.t1 AT4G35300 28.400 250 155 5 266 502 489 727 1.56e-22 102
MS.gene056687.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.29e-30 126
MS.gene056687.t1 AT4G35300 28.400 250 155 5 266 502 489 727 1.56e-22 102
MS.gene056687.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.29e-30 126
MS.gene056687.t1 AT4G35300 28.400 250 155 5 266 502 489 727 1.56e-22 102
MS.gene056687.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.54e-30 125
MS.gene056687.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.65e-22 102
MS.gene056687.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.54e-30 125
MS.gene056687.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.65e-22 102
MS.gene056687.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.54e-30 125
MS.gene056687.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.65e-22 102
MS.gene056687.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.54e-30 125
MS.gene056687.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.65e-22 102
MS.gene056687.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.54e-30 125
MS.gene056687.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.65e-22 102
MS.gene056687.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.54e-30 125
MS.gene056687.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.65e-22 102
MS.gene056687.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.54e-30 125
MS.gene056687.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.65e-22 102
MS.gene056687.t1 AT1G08920 25.536 466 294 14 41 490 43 471 7.80e-30 122
MS.gene056687.t1 AT1G54730 28.053 303 189 7 41 339 43 320 4.97e-29 117
MS.gene056687.t1 AT1G54730 28.053 303 189 7 41 339 43 320 4.97e-29 117
MS.gene056687.t1 AT3G51490 36.757 185 106 5 80 257 2 182 8.25e-28 118
MS.gene056687.t1 AT3G51490 28.682 258 165 7 244 491 422 670 8.49e-22 99.8
MS.gene056687.t1 AT2G48020 25.882 340 220 7 23 359 21 331 9.80e-28 114
MS.gene056687.t1 AT3G05155 25.705 319 204 8 41 357 38 325 4.44e-26 109
MS.gene056687.t1 AT1G08920 25.765 392 246 12 41 423 43 398 1.14e-23 104
MS.gene056687.t1 AT4G35300 28.400 250 155 5 266 502 302 540 9.26e-23 102
MS.gene056687.t1 AT1G79820 30.622 209 135 4 28 231 52 255 7.81e-17 83.6
MS.gene056687.t1 AT1G79820 33.553 152 93 3 342 491 297 442 1.57e-11 67.0
MS.gene056687.t1 AT1G79820 33.553 152 93 3 342 491 235 380 1.29e-11 67.0
MS.gene056687.t1 AT5G43340 22.669 472 279 16 66 488 68 502 5.88e-11 65.5
MS.gene056687.t1 AT3G13050 25.909 440 266 15 81 486 74 487 7.10e-11 65.1
MS.gene056687.t1 AT3G13050 25.909 440 266 15 81 486 74 487 7.10e-11 65.1
MS.gene056687.t1 AT3G13050 25.909 440 266 15 81 486 74 487 7.10e-11 65.1
MS.gene056687.t1 AT3G13050 25.909 440 266 15 81 486 74 487 7.10e-11 65.1

Find 114 sgRNAs with CRISPR-Local

Find 166 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCAAACACAAAGCTAAAT+TGG 0.143556 4.3:-35845152 MS.gene056687:CDS
TCAAAACTATCACTTAAATT+AGG 0.212301 4.3:-35845835 MS.gene056687:CDS
TTTACCATATCCAAGTAAAA+TGG 0.248936 4.3:+35846888 None:intergenic
CTCATTGGTTCATGTCTTGC+CGG 0.296833 4.3:-35846540 MS.gene056687:CDS
GAAGAAATGGAAGCCTCTTT+TGG 0.298781 4.3:-35844835 MS.gene056687:CDS
CTTGTGGTGTTGTGGTGAAT+AGG 0.316596 4.3:-35845005 MS.gene056687:CDS
TAAGGCTCCGGCAAAGAAAA+TGG 0.330343 4.3:+35846467 None:intergenic
TTTGGAGGTATTGCTACAAT+TGG 0.332942 4.3:-35844907 MS.gene056687:CDS
CGTTACACCATCGTGTTTGC+CGG 0.353883 4.3:-35846492 MS.gene056687:CDS
GGGAAAATTGAGGTCTTGTT+AGG 0.356338 4.3:-35846582 MS.gene056687:CDS
ATAAACAGTGGAATATTAAT+CGG 0.362212 4.3:-35845880 MS.gene056687:CDS
CAAGTTGCACAAGTTCAGTT+AGG 0.362764 4.3:-35844760 MS.gene056687:CDS
TTGTAGCAATACCTCCAAAT+AGG 0.368433 4.3:+35844911 None:intergenic
AACTACAACTTCCTCATGTT+TGG 0.374495 4.3:-35846426 MS.gene056687:CDS
GAGAAAGCCACGAGAGGAAG+CGG 0.386076 4.3:+35846332 None:intergenic
ACATCGTCGTTGCAATCTTC+AGG 0.387621 4.3:+35845531 None:intergenic
TATGTAGCAACTTTCTCAAT+TGG 0.390137 4.3:-35845096 MS.gene056687:CDS
AGGTAAAACACTTGAAGAAA+TGG 0.392070 4.3:-35844848 MS.gene056687:CDS
AAAACACTGGTGAAGGTGTA+TGG 0.424900 4.3:-35845491 MS.gene056687:CDS
TTCAAACACAAAGCTAAATT+GGG 0.444039 4.3:-35845151 MS.gene056687:CDS
GAGACTTCAGCGGTATAGAC+CGG 0.444678 4.3:+35846357 None:intergenic
AGAAAGCCACGAGAGGAAGC+GGG 0.446522 4.3:+35846333 None:intergenic
AACTATCACTTAAATTAGGT+TGG 0.451312 4.3:-35845831 MS.gene056687:CDS
AACATGAGGAAGTTGTAGTT+TGG 0.455379 4.3:+35846429 None:intergenic
TTGGAGGTATTGCTACAATT+GGG 0.464188 4.3:-35844906 MS.gene056687:CDS
TTGTGGTGTTGTGGTGAATA+GGG 0.468285 4.3:-35845004 MS.gene056687:CDS
CCTTTGAGGTTGAGGGCACA+AGG 0.470587 4.3:-35845033 MS.gene056687:CDS
AGACTTCAGCGGTATAGACC+GGG 0.470597 4.3:+35846358 None:intergenic
AGCATAGCCGATGCCAACTC+CGG 0.471335 4.3:+35846392 None:intergenic
ATCAACATCTACTCTCTCAT+TGG 0.471388 4.3:-35846555 MS.gene056687:CDS
TGCCAACTCCGGCGACAAAA+CGG 0.474251 4.3:+35846403 None:intergenic
TGGTGAATAGGGTCACTAGT+GGG 0.475348 4.3:-35844993 MS.gene056687:CDS
CCTTAGCTGAGCCTCTTCCT+TGG 0.476032 4.3:+35845669 None:intergenic
ACGAGCCATCGTGGTGACTC+TGG 0.481166 4.3:+35845745 None:intergenic
CTTTGCCGGAGCCTTACTCA+TGG 0.483078 4.3:-35846460 MS.gene056687:CDS
ACAAAGCTAAATTGGGCCAT+TGG 0.485743 4.3:-35845144 MS.gene056687:CDS
ACTCACTAGTGTTGGTGGTA+TGG 0.486491 4.3:-35845220 MS.gene056687:CDS
GAGAAAATCAAAGAATACTA+AGG 0.489393 4.3:-35844803 MS.gene056687:CDS
TCCAGCGGCTTGTTTAATCT+CGG 0.492502 4.3:+35845557 None:intergenic
CTGTTACTCACTAGTGTTGG+TGG 0.493290 4.3:-35845225 MS.gene056687:CDS
TCCAAGTAAAATGGAAGTCA+TGG 0.500166 4.3:+35846897 None:intergenic
TCTAAAGGAATTACGATTGG+TGG 0.500778 4.3:-35844943 MS.gene056687:CDS
TTTGTCGCCGGAGTTGGCAT+CGG 0.500928 4.3:-35846399 MS.gene056687:CDS
CTCGTAATGAGAGGTCGTTT+AGG 0.500941 4.3:-35845727 MS.gene056687:CDS
TGGTGAGAAACCCATGAGTA+AGG 0.502832 4.3:+35846449 None:intergenic
CATATTGTAATAGCTGCACT+AGG 0.508847 4.3:-35845432 MS.gene056687:CDS
TTTGCCGGAGCCTTACTCAT+GGG 0.509489 4.3:-35846459 MS.gene056687:CDS
CTTAACAAATCCAACGGCTA+TGG 0.515197 4.3:+35845302 None:intergenic
CTTATTGCAACCATAGCCGT+TGG 0.515422 4.3:-35845312 MS.gene056687:CDS
GCAACTTTCTCAATTGGTGC+AGG 0.518421 4.3:-35845090 MS.gene056687:CDS
AATCCAGTCGGAGGTTCTGC+CGG 0.519805 4.3:+35846521 None:intergenic
CAACAAAACTTCAGATTCCA+AGG 0.520556 4.3:-35845686 MS.gene056687:CDS
AAGTTGCACAAGTTCAGTTA+GGG 0.522313 4.3:-35844759 MS.gene056687:CDS
AACTTCAGATTCCAAGGAAG+AGG 0.522917 4.3:-35845680 MS.gene056687:CDS
GGCAGAACCTCCGACTGGAT+TGG 0.526767 4.3:-35846519 MS.gene056687:CDS
GAAAGCCACGAGAGGAAGCG+GGG 0.529030 4.3:+35846334 None:intergenic
AAAGCCACGAGAGGAAGCGG+GGG 0.538579 4.3:+35846335 None:intergenic
ACAGTGGACGACGACCATAT+CGG 0.540286 4.3:+35845244 None:intergenic
CTATGCTCTCATGATTGCCC+CGG 0.541782 4.3:-35846376 MS.gene056687:CDS
TTAGGTTGGAGAATGATGCT+TGG 0.547667 4.3:-35845817 MS.gene056687:CDS
GCCGAGATTAAACAAGCCGC+TGG 0.549351 4.3:-35845558 MS.gene056687:CDS
ACTACTATAAACCCATGTGA+TGG 0.549519 4.3:+35845065 None:intergenic
TCCGGCAAAGAAAATGGCGC+CGG 0.556292 4.3:+35846473 None:intergenic
CCTTGTGCCCTCAACCTCAA+AGG 0.562045 4.3:+35845033 None:intergenic
AGTATCCGACGGGAAAATTG+AGG 0.564384 4.3:-35846592 MS.gene056687:CDS
TTGTCTAAAGGAATTACGAT+TGG 0.569189 4.3:-35844946 MS.gene056687:CDS
AGGTGCAGCTTGTGGTGTTG+TGG 0.570667 4.3:-35845013 MS.gene056687:CDS
TATCTACTGAGTTGAGACAT+TGG 0.571756 4.3:+35844735 None:intergenic
GAGGTATTGCTACAATTGGG+TGG 0.571968 4.3:-35844903 MS.gene056687:CDS
GTGGTGAATAGGGTCACTAG+TGG 0.574539 4.3:-35844994 MS.gene056687:CDS
CTACTATAAACCCATGTGAT+GGG 0.576148 4.3:+35845066 None:intergenic
TTGCCGGCAGAACCTCCGAC+TGG 0.576660 4.3:-35846524 MS.gene056687:CDS
TGGCTAAGACTCCAACGGCT+AGG 0.579484 4.3:+35845770 None:intergenic
ATATGACGAACTGCGGGTGT+AGG 0.580443 4.3:+35845450 None:intergenic
GAAACCCATGAGTAAGGCTC+CGG 0.584696 4.3:+35846455 None:intergenic
TTGGTGCAGGACCCATCACA+TGG 0.585356 4.3:-35845077 MS.gene056687:CDS
CCACGATGGCTCGTAATGAG+AGG 0.586462 4.3:-35845736 MS.gene056687:CDS
CGACAAAACGGCCAAACATG+AGG 0.587511 4.3:+35846415 None:intergenic
CTTTCTCACTTCTTTCCCAG+AGG 0.589254 4.3:-35846316 MS.gene056687:intron
ACAGATATTGGTGTTATGAG+TGG 0.592393 4.3:-35846645 MS.gene056687:intron
CCTTCAGTAATCCTAGCCGT+TGG 0.594994 4.3:-35845781 MS.gene056687:CDS
AGGGCACAAGGTGCAGCTTG+TGG 0.595043 4.3:-35845021 MS.gene056687:CDS
CCATCGTGGTGACTCTGGCA+TGG 0.596487 4.3:+35845750 None:intergenic
CCACTGTTACTCACTAGTGT+TGG 0.601446 4.3:-35845228 MS.gene056687:CDS
CCAAGGAAGAGGCTCAGCTA+AGG 0.609894 4.3:-35845669 MS.gene056687:intron
TATTGTGTCAAGATGAGTGA+GGG 0.613570 4.3:-35847021 None:intergenic
GAGACCTTAAAGTATCCGAC+GGG 0.613965 4.3:-35846602 MS.gene056687:CDS
TTGAATGATCGATGATCGTA+AGG 0.614986 4.3:+35845169 None:intergenic
CAAAACTACAGCGTCTACAC+CGG 0.619548 4.3:+35845386 None:intergenic
GGGAAAGATAGTTGAAGCAA+AGG 0.622531 4.3:-35847001 MS.gene056687:CDS
ATTACAATATGACGAACTGC+GGG 0.625794 4.3:+35845444 None:intergenic
AGAGACCTTAAAGTATCCGA+CGG 0.628792 4.3:-35846603 MS.gene056687:CDS
CAAGGTCTTAACAAATCCAA+CGG 0.634572 4.3:+35845296 None:intergenic
AGTTGCTATACTCAATCCAA+TGG 0.639610 4.3:+35845128 None:intergenic
TGGCATGGCTAAGACTCCAA+CGG 0.641928 4.3:+35845765 None:intergenic
AATGGCGCCGGCAAACACGA+TGG 0.644723 4.3:+35846485 None:intergenic
CCAACGGCTAGGATTACTGA+AGG 0.646658 4.3:+35845781 None:intergenic
CCTCTCATTACGAGCCATCG+TGG 0.646747 4.3:+35845736 None:intergenic
TGGAGAATGATGCTTGGAGT+AGG 0.648761 4.3:-35845811 MS.gene056687:CDS
GGTGAATAGGGTCACTAGTG+GGG 0.657688 4.3:-35844992 MS.gene056687:CDS
ATATTGTAATAGCTGCACTA+GGG 0.658336 4.3:-35845431 MS.gene056687:CDS
AGAAGTGAGAAAGCCACGAG+AGG 0.660349 4.3:+35846326 None:intergenic
TATTACAATATGACGAACTG+CGG 0.663026 4.3:+35845443 None:intergenic
AATCGTAATTCCTTTAGACA+AGG 0.664820 4.3:+35844948 None:intergenic
TGGTGCAGGACCCATCACAT+GGG 0.673212 4.3:-35845076 MS.gene056687:CDS
GCAATCTTCAGGTATTCCAG+CGG 0.674448 4.3:+35845542 None:intergenic
AGTAGCCACTAAAATAAACA+AGG 0.678884 4.3:+35845278 None:intergenic
CCAACACTAGTGAGTAACAG+TGG 0.692907 4.3:+35845228 None:intergenic
GACTTCAGCGGTATAGACCG+GGG 0.704184 4.3:+35846359 None:intergenic
ACGACGACCAATCCAGTCGG+AGG 0.711720 4.3:+35846512 None:intergenic
GTAACGACGACCAATCCAGT+CGG 0.738715 4.3:+35846509 None:intergenic
CCATGCCAGAGTCACCACGA+TGG 0.743650 4.3:-35845750 MS.gene056687:CDS
ATATTGTGTCAAGATGAGTG+AGG 0.744896 4.3:-35847022 None:intergenic
ATTATGCTACCTGAAACACA+AGG 0.780195 4.3:-35844868 MS.gene056687:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAATATAATATGAGA+TGG + chr4.3:35844898-35844917 None:intergenic 10.0%
!! ATAAATAACTCTTATAAAAC+TGG - chr4.3:35845624-35845643 MS.gene056687:intron 15.0%
!! TGATAAATAGAGATAAAAAA+AGG - chr4.3:35845586-35845605 MS.gene056687:intron 15.0%
!!! AATGCATAATTTCTTTTAAA+AGG + chr4.3:35845716-35845735 None:intergenic 15.0%
!! ATAAACAGTGGAATATTAAT+CGG - chr4.3:35845867-35845886 MS.gene056687:CDS 20.0%
!! ATAACAAGAGGATAAAATAT+TGG + chr4.3:35845045-35845064 None:intergenic 20.0%
!! GATAGAATAGTAAATTTCAA+TGG - chr4.3:35845658-35845677 MS.gene056687:intron 20.0%
!! TCAAAACTATCACTTAAATT+AGG - chr4.3:35845912-35845931 MS.gene056687:intron 20.0%
!! TCAAATTGATCATTTATTCT+CGG + chr4.3:35846108-35846127 None:intergenic 20.0%
!! TTCATAATACACGATAATAT+AGG - chr4.3:35845799-35845818 MS.gene056687:CDS 20.0%
!!! GTGCTATATTGTTTTATTAA+TGG - chr4.3:35844970-35844989 MS.gene056687:CDS 20.0%
!!! TTTTCATTCATAATAACAAG+AGG + chr4.3:35845057-35845076 None:intergenic 20.0%
! AACTATCACTTAAATTAGGT+TGG - chr4.3:35845916-35845935 MS.gene056687:intron 25.0%
! ATTCAAACACAAAGCTAAAT+TGG - chr4.3:35846595-35846614 MS.gene056687:CDS 25.0%
! CAAGTAAAAGTTAAAAACAC+TGG - chr4.3:35846243-35846262 MS.gene056687:intron 25.0%
! GAGAAAATCAAAGAATACTA+AGG - chr4.3:35846944-35846963 MS.gene056687:CDS 25.0%
! GAGATAAAAAAAGGTAAAAG+TGG - chr4.3:35845595-35845614 MS.gene056687:intron 25.0%
! GATTCTATATGCAATATATG+TGG + chr4.3:35845753-35845772 None:intergenic 25.0%
! TAAATTTCAATGGATGTTAG+TGG - chr4.3:35845668-35845687 MS.gene056687:intron 25.0%
! TTCAAACACAAAGCTAAATT+GGG - chr4.3:35846596-35846615 MS.gene056687:CDS 25.0%
! TTTACCATATCCAAGTAAAA+TGG + chr4.3:35844862-35844881 None:intergenic 25.0%
!! GTTAGTGGAAAATTTGTTTA+GGG - chr4.3:35845683-35845702 MS.gene056687:CDS 25.0%
!! GTTTCTCTTTGAAGAAAATT+TGG + chr4.3:35844934-35844953 None:intergenic 25.0%
!! TCTTTGAAGAAAATTTGGAT+AGG + chr4.3:35844929-35844948 None:intergenic 25.0%
!! TGTTAGTGGAAAATTTGTTT+AGG - chr4.3:35845682-35845701 MS.gene056687:CDS 25.0%
!! TTTTCAAAGCTCGTTTATTA+TGG - chr4.3:35845481-35845500 MS.gene056687:CDS 25.0%
!!! AAAGCATACTTGTTTCTTTT+AGG + chr4.3:35844810-35844829 None:intergenic 25.0%
!!! GGAGATTTTTTAGAAGTTAA+TGG - chr4.3:35845525-35845544 MS.gene056687:CDS 25.0%
!!! TAAGACCTTGTTTATTTTAG+TGG - chr4.3:35846464-35846483 MS.gene056687:CDS 25.0%
!!! TTAATTGATTTGATATCTGC+AGG - chr4.3:35845839-35845858 MS.gene056687:CDS 25.0%
AAAGTTAAAAACACTGGTGA+AGG - chr4.3:35846249-35846268 MS.gene056687:intron 30.0%
AATCGTAATTCCTTTAGACA+AGG + chr4.3:35846802-35846821 None:intergenic 30.0%
AGGTAAAACACTTGAAGAAA+TGG - chr4.3:35846899-35846918 MS.gene056687:CDS 30.0%
AGTAGCCACTAAAATAAACA+AGG + chr4.3:35846472-35846491 None:intergenic 30.0%
ATATTGTAATAGCTGCACTA+GGG - chr4.3:35846316-35846335 MS.gene056687:intron 30.0%
CTACAATCTTCAAAAAAGCT+GGG - chr4.3:35846391-35846410 MS.gene056687:CDS 30.0%
TATGTAGCAACTTTCTCAAT+TGG - chr4.3:35846651-35846670 MS.gene056687:intron 30.0%
TATTACAATATGACGAACTG+CGG + chr4.3:35846307-35846326 None:intergenic 30.0%
TTGTCTAAAGGAATTACGAT+TGG - chr4.3:35846801-35846820 MS.gene056687:intron 30.0%
! AAGCCTCTTTTGGTAAAATT+TGG - chr4.3:35846922-35846941 MS.gene056687:CDS 30.0%
! ACTTCCATTTTACTTGGATA+TGG - chr4.3:35844855-35844874 MS.gene056687:CDS 30.0%
! ACTTTTATGTTAGACCGATA+TGG - chr4.3:35846489-35846508 MS.gene056687:CDS 30.0%
! GTAGTGAAATTTTTCCTTTG+AGG - chr4.3:35846700-35846719 MS.gene056687:intron 30.0%
! TCTCCAAATTTTACCAAAAG+AGG + chr4.3:35846928-35846947 None:intergenic 30.0%
! TTTCTTTTAGGCTTCTTTTG+TGG + chr4.3:35844798-35844817 None:intergenic 30.0%
!!! AAATTTTTCCTTTGAGGTTG+AGG - chr4.3:35846706-35846725 MS.gene056687:intron 30.0%
!!! AATTTTTCCTTTGAGGTTGA+GGG - chr4.3:35846707-35846726 MS.gene056687:intron 30.0%
!!! CATTTTTTTCAACAAGCTTC+CGG - chr4.3:35846342-35846361 MS.gene056687:CDS 30.0%
AACATGAGGAAGTTGTAGTT+TGG + chr4.3:35845321-35845340 None:intergenic 35.0%
AACTACAACTTCCTCATGTT+TGG - chr4.3:35845321-35845340 MS.gene056687:CDS 35.0%
AAGTTGCACAAGTTCAGTTA+GGG - chr4.3:35846988-35847007 MS.gene056687:CDS 35.0%
ACACGTCATCATACAGATAT+TGG - chr4.3:35845090-35845109 MS.gene056687:CDS 35.0%
ACTACTATAAACCCATGTGA+TGG + chr4.3:35846685-35846704 None:intergenic 35.0%
AGTTGCTATACTCAATCCAA+TGG + chr4.3:35846622-35846641 None:intergenic 35.0%
ATCAACATCTACTCTCTCAT+TGG - chr4.3:35845192-35845211 MS.gene056687:CDS 35.0%
ATTACAATATGACGAACTGC+GGG + chr4.3:35846306-35846325 None:intergenic 35.0%
ATTATGCTACCTGAAACACA+AGG - chr4.3:35846879-35846898 MS.gene056687:intron 35.0%
CAACAAAACTTCAGATTCCA+AGG - chr4.3:35846061-35846080 MS.gene056687:intron 35.0%
CAAGGTCTTAACAAATCCAA+CGG + chr4.3:35846454-35846473 None:intergenic 35.0%
CATATTGTAATAGCTGCACT+AGG - chr4.3:35846315-35846334 MS.gene056687:intron 35.0%
CCTACAATCTTCAAAAAAGC+TGG - chr4.3:35846390-35846409 MS.gene056687:CDS 35.0%
CTACTATAAACCCATGTGAT+GGG + chr4.3:35846684-35846703 None:intergenic 35.0%
TAAAGATGAGACTAACCTCT+GGG + chr4.3:35845449-35845468 None:intergenic 35.0%
TCCAAGTAAAATGGAAGTCA+TGG + chr4.3:35844853-35844872 None:intergenic 35.0%
TCTAAAGGAATTACGATTGG+TGG - chr4.3:35846804-35846823 MS.gene056687:intron 35.0%
TTAAAGATGAGACTAACCTC+TGG + chr4.3:35845450-35845469 None:intergenic 35.0%
TTCAAAAAAGCTGGGATCAA+CGG - chr4.3:35846399-35846418 MS.gene056687:CDS 35.0%
TTGAATGATCGATGATCGTA+AGG + chr4.3:35846581-35846600 None:intergenic 35.0%
TTGTAGCAATACCTCCAAAT+AGG + chr4.3:35846839-35846858 None:intergenic 35.0%
! ACTTTTCTGTCCTTGTCTAA+AGG - chr4.3:35846789-35846808 MS.gene056687:intron 35.0%
! AGTGTTTTACCTTGTGTTTC+AGG + chr4.3:35846891-35846910 None:intergenic 35.0%
! TCCATGACTTCCATTTTACT+TGG - chr4.3:35844849-35844868 MS.gene056687:CDS 35.0%
!! ACAGATATTGGTGTTATGAG+TGG - chr4.3:35845102-35845121 MS.gene056687:CDS 35.0%
!! TTGGAGGTATTGCTACAATT+GGG - chr4.3:35846841-35846860 MS.gene056687:intron 35.0%
!! TTTGGAGGTATTGCTACAAT+TGG - chr4.3:35846840-35846859 MS.gene056687:intron 35.0%
!!! CCAGCTTTTTTGAAGATTGT+AGG + chr4.3:35846393-35846412 None:intergenic 35.0%
AACTTCAGATTCCAAGGAAG+AGG - chr4.3:35846067-35846086 MS.gene056687:intron 40.0%
ACAAAGCTAAATTGGGCCAT+TGG - chr4.3:35846603-35846622 MS.gene056687:CDS 40.0%
CAAGTTGCACAAGTTCAGTT+AGG - chr4.3:35846987-35847006 MS.gene056687:CDS 40.0%
CTTAACAAATCCAACGGCTA+TGG + chr4.3:35846448-35846467 None:intergenic 40.0%
GGGAAAGATAGTTGAAGCAA+AGG - chr4.3:35844746-35844765 MS.gene056687:CDS 40.0%
! AAAACACTGGTGAAGGTGTA+TGG - chr4.3:35846256-35846275 MS.gene056687:intron 40.0%
! AGAGACCTTAAAGTATCCGA+CGG - chr4.3:35845144-35845163 MS.gene056687:CDS 40.0%
! CTGCAGGTTTTCATAAACAG+TGG - chr4.3:35845855-35845874 MS.gene056687:CDS 40.0%
! GAAGAAATGGAAGCCTCTTT+TGG - chr4.3:35846912-35846931 MS.gene056687:CDS 40.0%
! GGTGCATTTTTCCTATTTGG+AGG - chr4.3:35846825-35846844 MS.gene056687:intron 40.0%
! GGTGGTGCATTTTTCCTATT+TGG - chr4.3:35846822-35846841 MS.gene056687:intron 40.0%
! TGCTTTTGCTTGTGCTATGT+TGG - chr4.3:35844824-35844843 MS.gene056687:CDS 40.0%
! TTTTCCCGTCGGATACTTTA+AGG + chr4.3:35845152-35845171 None:intergenic 40.0%
!! GGGAAAATTGAGGTCTTGTT+AGG - chr4.3:35845165-35845184 MS.gene056687:CDS 40.0%
!! TTAGGTTGGAGAATGATGCT+TGG - chr4.3:35845930-35845949 MS.gene056687:intron 40.0%
!! TTGTGGTGTTGTGGTGAATA+GGG - chr4.3:35846743-35846762 MS.gene056687:intron 40.0%
ACATCGTCGTTGCAATCTTC+AGG + chr4.3:35846219-35846238 None:intergenic 45.0%
AGTATCCGACGGGAAAATTG+AGG - chr4.3:35845155-35845174 MS.gene056687:CDS 45.0%
CAAAACTACAGCGTCTACAC+CGG + chr4.3:35846364-35846383 None:intergenic 45.0%
CCAACACTAGTGAGTAACAG+TGG + chr4.3:35846522-35846541 None:intergenic 45.0%
CCACTGTTACTCACTAGTGT+TGG - chr4.3:35846519-35846538 MS.gene056687:CDS 45.0%
CTCGTAATGAGAGGTCGTTT+AGG - chr4.3:35846020-35846039 MS.gene056687:intron 45.0%
CTTATTGCAACCATAGCCGT+TGG - chr4.3:35846435-35846454 MS.gene056687:CDS 45.0%
CTTTCTCACTTCTTTCCCAG+AGG - chr4.3:35845431-35845450 MS.gene056687:CDS 45.0%
GCAACTTTCTCAATTGGTGC+AGG - chr4.3:35846657-35846676 MS.gene056687:intron 45.0%
GCAATCTTCAGGTATTCCAG+CGG + chr4.3:35846208-35846227 None:intergenic 45.0%
TAAGGCTCCGGCAAAGAAAA+TGG + chr4.3:35845283-35845302 None:intergenic 45.0%
TGGAGAATGATGCTTGGAGT+AGG - chr4.3:35845936-35845955 MS.gene056687:intron 45.0%
TGGTGAATAGGGTCACTAGT+GGG - chr4.3:35846754-35846773 MS.gene056687:intron 45.0%
TGGTGAGAAACCCATGAGTA+AGG + chr4.3:35845301-35845320 None:intergenic 45.0%
! CAAGACCTCAATTTTCCCGT+CGG + chr4.3:35845163-35845182 None:intergenic 45.0%
! CTGTTACTCACTAGTGTTGG+TGG - chr4.3:35846522-35846541 MS.gene056687:CDS 45.0%
! GAGACCTTAAAGTATCCGAC+GGG - chr4.3:35845145-35845164 MS.gene056687:CDS 45.0%
! TCCAGCGGCTTGTTTAATCT+CGG + chr4.3:35846193-35846212 None:intergenic 45.0%
!! ACTCACTAGTGTTGGTGGTA+TGG - chr4.3:35846527-35846546 MS.gene056687:CDS 45.0%
!! CTCATTGGTTCATGTCTTGC+CGG - chr4.3:35845207-35845226 MS.gene056687:CDS 45.0%
!! CTTGTGGTGTTGTGGTGAAT+AGG - chr4.3:35846742-35846761 MS.gene056687:intron 45.0%
!! GAGGTATTGCTACAATTGGG+TGG - chr4.3:35846844-35846863 MS.gene056687:intron 45.0%
!!! ATTATAAAAAAGTAAATTTT+AGG - chr4.3:35845504-35845523 MS.gene056687:CDS 5.0%
ACAGTGGACGACGACCATAT+CGG + chr4.3:35846506-35846525 None:intergenic 50.0%
AGAAGTGAGAAAGCCACGAG+AGG + chr4.3:35845424-35845443 None:intergenic 50.0%
AGACTTCAGCGGTATAGACC+GGG + chr4.3:35845392-35845411 None:intergenic 50.0%
ATATGACGAACTGCGGGTGT+AGG + chr4.3:35846300-35846319 None:intergenic 50.0%
CCAACGGCTAGGATTACTGA+AGG + chr4.3:35845969-35845988 None:intergenic 50.0%
CCTTCAGTAATCCTAGCCGT+TGG - chr4.3:35845966-35845985 MS.gene056687:intron 50.0%
CGACAAAACGGCCAAACATG+AGG + chr4.3:35845335-35845354 None:intergenic 50.0%
CGTTACACCATCGTGTTTGC+CGG - chr4.3:35845255-35845274 MS.gene056687:CDS 50.0%
CTATGCTCTCATGATTGCCC+CGG - chr4.3:35845371-35845390 MS.gene056687:CDS 50.0%
GAAACCCATGAGTAAGGCTC+CGG + chr4.3:35845295-35845314 None:intergenic 50.0%
GAGACTTCAGCGGTATAGAC+CGG + chr4.3:35845393-35845412 None:intergenic 50.0%
GGTGAATAGGGTCACTAGTG+GGG - chr4.3:35846755-35846774 MS.gene056687:intron 50.0%
GTAACGACGACCAATCCAGT+CGG + chr4.3:35845241-35845260 None:intergenic 50.0%
GTGGTGAATAGGGTCACTAG+TGG - chr4.3:35846753-35846772 MS.gene056687:intron 50.0%
TGGCATGGCTAAGACTCCAA+CGG + chr4.3:35845985-35846004 None:intergenic 50.0%
TTTGCCGGAGCCTTACTCAT+GGG - chr4.3:35845288-35845307 MS.gene056687:CDS 50.0%
!! ATGTTTGGCCGTTTTGTCGC+CGG - chr4.3:35845336-35845355 MS.gene056687:CDS 50.0%
AATCCAGTCGGAGGTTCTGC+CGG + chr4.3:35845229-35845248 None:intergenic 55.0%
AGAAAGCCACGAGAGGAAGC+GGG + chr4.3:35845417-35845436 None:intergenic 55.0%
AGCATAGCCGATGCCAACTC+CGG + chr4.3:35845358-35845377 None:intergenic 55.0%
CCAAGGAAGAGGCTCAGCTA+AGG - chr4.3:35846078-35846097 MS.gene056687:intron 55.0%
CCACGATGGCTCGTAATGAG+AGG - chr4.3:35846011-35846030 MS.gene056687:intron 55.0%
CCTCTCATTACGAGCCATCG+TGG + chr4.3:35846014-35846033 None:intergenic 55.0%
CCTTAGCTGAGCCTCTTCCT+TGG + chr4.3:35846081-35846100 None:intergenic 55.0%
CCTTGTGCCCTCAACCTCAA+AGG + chr4.3:35846717-35846736 None:intergenic 55.0%
CTTTGCCGGAGCCTTACTCA+TGG - chr4.3:35845287-35845306 MS.gene056687:CDS 55.0%
GACTTCAGCGGTATAGACCG+GGG + chr4.3:35845391-35845410 None:intergenic 55.0%
GAGAAAGCCACGAGAGGAAG+CGG + chr4.3:35845418-35845437 None:intergenic 55.0%
GCCGAGATTAAACAAGCCGC+TGG - chr4.3:35846189-35846208 MS.gene056687:intron 55.0%
TCCGGCAAAGAAAATGGCGC+CGG + chr4.3:35845277-35845296 None:intergenic 55.0%
TGCCAACTCCGGCGACAAAA+CGG + chr4.3:35845347-35845366 None:intergenic 55.0%
TGGCTAAGACTCCAACGGCT+AGG + chr4.3:35845980-35845999 None:intergenic 55.0%
TGGTGCAGGACCCATCACAT+GGG - chr4.3:35846671-35846690 MS.gene056687:intron 55.0%
TTGGTGCAGGACCCATCACA+TGG - chr4.3:35846670-35846689 MS.gene056687:intron 55.0%
TTTGTCGCCGGAGTTGGCAT+CGG - chr4.3:35845348-35845367 MS.gene056687:CDS 55.0%
! AGGTGCAGCTTGTGGTGTTG+TGG - chr4.3:35846734-35846753 MS.gene056687:intron 55.0%
!! CCTTTGAGGTTGAGGGCACA+AGG - chr4.3:35846714-35846733 MS.gene056687:intron 55.0%
AAAGCCACGAGAGGAAGCGG+GGG + chr4.3:35845415-35845434 None:intergenic 60.0%
ACGACGACCAATCCAGTCGG+AGG + chr4.3:35845238-35845257 None:intergenic 60.0%
ACGAGCCATCGTGGTGACTC+TGG + chr4.3:35846005-35846024 None:intergenic 60.0%
AGGGCACAAGGTGCAGCTTG+TGG - chr4.3:35846726-35846745 MS.gene056687:intron 60.0%
CCATCGTGGTGACTCTGGCA+TGG + chr4.3:35846000-35846019 None:intergenic 60.0%
CCATGCCAGAGTCACCACGA+TGG - chr4.3:35845997-35846016 MS.gene056687:intron 60.0%
GAAAGCCACGAGAGGAAGCG+GGG + chr4.3:35845416-35845435 None:intergenic 60.0%
GGCAGAACCTCCGACTGGAT+TGG - chr4.3:35845228-35845247 MS.gene056687:CDS 60.0%
!! AATGGCGCCGGCAAACACGA+TGG + chr4.3:35845265-35845284 None:intergenic 60.0%
!! GCCGGCGCCATTTTCTTTGC+CGG - chr4.3:35845273-35845292 MS.gene056687:CDS 60.0%
GGAAGCGGGGGAGACTTCAG+CGG + chr4.3:35845403-35845422 None:intergenic 65.0%
TTGCCGGCAGAACCTCCGAC+TGG - chr4.3:35845223-35845242 MS.gene056687:CDS 65.0%
!! GGCCGTTTTGTCGCCGGAGT+TGG - chr4.3:35845342-35845361 MS.gene056687:CDS 65.0%
GTCTCCCCCGCTTCCTCTCG+TGG - chr4.3:35845408-35845427 MS.gene056687:CDS 70.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 35844738 35847031 35844738 ID=MS.gene056687
chr4.3 mRNA 35844738 35847031 35844738 ID=MS.gene056687.t1;Parent=MS.gene056687
chr4.3 exon 35846893 35847031 35846893 ID=MS.gene056687.t1.exon1;Parent=MS.gene056687.t1
chr4.3 CDS 35846893 35847031 35846893 ID=cds.MS.gene056687.t1;Parent=MS.gene056687.t1
chr4.3 exon 35846317 35846663 35846317 ID=MS.gene056687.t1.exon2;Parent=MS.gene056687.t1
chr4.3 CDS 35846317 35846663 35846317 ID=cds.MS.gene056687.t1;Parent=MS.gene056687.t1
chr4.3 exon 35845670 35845908 35845670 ID=MS.gene056687.t1.exon3;Parent=MS.gene056687.t1
chr4.3 CDS 35845670 35845908 35845670 ID=cds.MS.gene056687.t1;Parent=MS.gene056687.t1
chr4.3 exon 35844738 35845584 35844738 ID=MS.gene056687.t1.exon4;Parent=MS.gene056687.t1
chr4.3 CDS 35844738 35845584 35844738 ID=cds.MS.gene056687.t1;Parent=MS.gene056687.t1
Gene Sequence

>MS.gene056687

ATGAGTGAGGGAAAGATAGTTGAAGCAAAGGCTCAAAAAAATCTTCAAGATTTTGATCCACAAAAGAAGCCTAAAAGAAACAAGTATGCTTTTGCTTGTGCTATGTTGGCTTCCATGACTTCCATTTTACTTGGATATGGTAAATAATTACTATACACCATCTCATATTATATTTTATTTATTATACTCCTATCCAAATTTTCTTCAAAGAGAAACAAGTATGATTTTGCTTGTGCTATATTGTTTTATTAATGGTAAATATTAGTACGTTAATTGTTACGTTAGTATTCTCTTTAATCATTTGCCAATATTTTATCCTCTTGTTATTATGAATGAAAAATATTGATTTTTGACACGTCATCATACAGATATTGGTGTTATGAGTGGAGCAGCAATCTACATACAAAGAGACCTTAAAGTATCCGACGGGAAAATTGAGGTCTTGTTAGGAATCATCAACATCTACTCTCTCATTGGTTCATGTCTTGCCGGCAGAACCTCCGACTGGATTGGTCGTCGTTACACCATCGTGTTTGCCGGCGCCATTTTCTTTGCCGGAGCCTTACTCATGGGTTTCTCACCAAACTACAACTTCCTCATGTTTGGCCGTTTTGTCGCCGGAGTTGGCATCGGCTATGCTCTCATGATTGCCCCGGTCTATACCGCTGAAGTCTCCCCCGCTTCCTCTCGTGGCTTTCTCACTTCTTTCCCAGAGGTTAGTCTCATCTTTAATTTATCTATTTTTTTCAAAGCTCGTTTATTATGGATTATAAAAAAGTAAATTTTAGGAGATTTTTTAGAAGTTAATGGAACATTTGATAGAATAGTGAATTCTCAATTGAATAGCTTGATAAATAGAGATAAAAAAAGGTAAAAGTGGACAAACATAAATAACTCTTATAAAACTGGTGCAATAATTTGATAGAATAGTAAATTTCAATGGATGTTAGTGGAAAATTTGTTTAGGGTACATAGCCTTTTAAAAGAAATTATGCATTTCTGTTATTTTTTTCCACATATATTGCATATAGAATCTTTACTAGTAGTATATCTATTTAATATTCATAATACACGATAATATAGGTGTAAAAATTTAACATTTTAATTGATTTGATATCTGCAGGTTTTCATAAACAGTGGAATATTAATCGGATACATATCAAACTATGCATTTTCAAAACTATCACTTAAATTAGGTTGGAGAATGATGCTTGGAGTAGGTGCAATTCCTTCAGTAATCCTAGCCGTTGGAGTCTTAGCCATGCCAGAGTCACCACGATGGCTCGTAATGAGAGGTCGTTTAGGAGACGCAATAAAAGTACTCAACAAAACTTCAGATTCCAAGGAAGAGGCTCAGCTAAGGTTAGCCGAGAATAAATGATCAATTTGATTGTACTATCTTTATTTTAACATTTGAATGACGCTTATTTTTTTGTCAATAAAATAGATTAGCCGAGATTAAACAAGCCGCTGGAATACCTGAAGATTGCAACGACGATGTTGTTCAAGTAAAAGTTAAAAACACTGGTGAAGGTGTATGGAAAGAGCTTTTTCTTCATCCTACACCCGCAGTTCGTCATATTGTAATAGCTGCACTAGGGATTCATTTTTTTCAACAAGCTTCCGGTGTAGACGCTGTAGTTTTGTATAGTCCTACAATCTTCAAAAAAGCTGGGATCAACGGTGATACGCATCTTCTTATTGCAACCATAGCCGTTGGATTTGTTAAGACCTTGTTTATTTTAGTGGCTACTTTTATGTTAGACCGATATGGTCGTCGTCCACTGTTACTCACTAGTGTTGGTGGTATGGTAGTCTCGCTTCTCACACTCGCTGTCAGCCTTACGATCATCGATCATTCAAACACAAAGCTAAATTGGGCCATTGGATTGAGTATAGCAACTGTTTTGTCATATGTAGCAACTTTCTCAATTGGTGCAGGACCCATCACATGGGTTTATAGTAGTGAAATTTTTCCTTTGAGGTTGAGGGCACAAGGTGCAGCTTGTGGTGTTGTGGTGAATAGGGTCACTAGTGGGGTTATTTCAATGACTTTTCTGTCCTTGTCTAAAGGAATTACGATTGGTGGTGCATTTTTCCTATTTGGAGGTATTGCTACAATTGGGTGGATATTTTTTTATATTATGCTACCTGAAACACAAGGTAAAACACTTGAAGAAATGGAAGCCTCTTTTGGTAAAATTTGGAGAAAATCAAAGAATACTAAGGAAGCTGAAAAAGACAATGCTCAAGTTGCACAAGTTCAGTTAGGGACCAATGTCTCAACTCAGTAG

Protein sequence

>MS.gene056687.t1

MSEGKIVEAKAQKNLQDFDPQKKPKRNKYAFACAMLASMTSILLGYDIGVMSGAAIYIQRDLKVSDGKIEVLLGIINIYSLIGSCLAGRTSDWIGRRYTIVFAGAIFFAGALLMGFSPNYNFLMFGRFVAGVGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINSGILIGYISNYAFSKLSLKLGWRMMLGVGAIPSVILAVGVLAMPESPRWLVMRGRLGDAIKVLNKTSDSKEEAQLRLAEIKQAAGIPEDCNDDVVQVKVKNTGEGVWKELFLHPTPAVRHIVIAALGIHFFQQASGVDAVVLYSPTIFKKAGINGDTHLLIATIAVGFVKTLFILVATFMLDRYGRRPLLLTSVGGMVVSLLTLAVSLTIIDHSNTKLNWAIGLSIATVLSYVATFSIGAGPITWVYSSEIFPLRLRAQGAACGVVVNRVTSGVISMTFLSLSKGITIGGAFFLFGGIATIGWIFFYIMLPETQGKTLEEMEASFGKIWRKSKNTKEAEKDNAQVAQVQLGTNVSTQ