AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22789

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22789.t1 MTR_7g112580 99.265 544 4 0 1 544 1 544 0.0 1132
MS.gene22789.t1 MTR_4g087980 47.581 496 223 8 68 542 37 516 8.84e-159 463
MS.gene22789.t1 MTR_2g044880 47.699 478 222 8 80 542 61 525 2.63e-158 462
MS.gene22789.t1 MTR_3g091380 45.920 527 256 10 40 543 78 598 8.77e-156 458
MS.gene22789.t1 MTR_7g108905 41.187 556 304 8 1 543 12 557 2.81e-150 442
MS.gene22789.t1 MTR_1g008140 48.319 476 208 9 99 543 140 608 2.75e-149 442
MS.gene22789.t1 MTR_4g087970 43.912 501 246 10 64 543 32 518 1.49e-143 424
MS.gene22789.t1 MTR_4g025730 49.666 449 188 10 102 542 91 509 6.32e-143 422
MS.gene22789.t1 MTR_4g025690 49.339 454 189 10 100 542 90 513 2.64e-138 410
MS.gene22789.t1 MTR_8g042900 41.571 522 282 7 34 542 70 581 1.14e-136 409
MS.gene22789.t1 MTR_8g104655 45.070 497 235 10 68 542 61 541 5.02e-136 405
MS.gene22789.t1 MTR_3g010780 43.121 487 240 6 73 542 108 574 1.77e-135 405
MS.gene22789.t1 MTR_1g083520 44.304 474 230 8 89 542 69 528 5.37e-135 402
MS.gene22789.t1 MTR_7g050980 45.275 455 218 8 102 542 118 555 4.47e-133 398
MS.gene22789.t1 MTR_8g023310 44.111 467 234 6 98 542 128 589 5.31e-133 399
MS.gene22789.t1 MTR_7g050870 41.651 521 261 13 44 542 55 554 3.12e-131 394
MS.gene22789.t1 MTR_1g054880 44.731 465 227 8 106 542 96 558 7.65e-130 390
MS.gene22789.t1 MTR_2g044810 42.017 476 249 8 76 542 77 534 1.40e-129 389
MS.gene22789.t1 MTR_4g025670 43.827 486 224 11 78 542 32 489 5.03e-129 385
MS.gene22789.t1 MTR_1g088020 44.325 467 228 8 106 542 91 555 6.43e-128 385
MS.gene22789.t1 MTR_8g104645 53.846 338 143 3 218 542 35 372 3.97e-127 377
MS.gene22789.t1 MTR_7g050950 42.035 521 258 16 44 542 55 553 9.25e-126 379
MS.gene22789.t1 MTR_4g124520 43.590 429 217 6 127 542 105 521 2.98e-125 377
MS.gene22789.t1 MTR_3g010770 42.213 488 241 7 95 544 93 577 5.12e-125 379
MS.gene22789.t1 MTR_8g042910 43.182 484 230 10 98 542 135 612 3.72e-124 377
MS.gene22789.t1 MTR_7g108875 44.421 466 228 9 106 542 101 564 9.36e-124 375
MS.gene22789.t1 MTR_1g088225 43.683 467 229 9 106 542 91 553 5.85e-122 370
MS.gene22789.t1 MTR_7g053360 44.270 445 218 8 109 542 102 527 2.60e-121 367
MS.gene22789.t1 MTR_3g008640 47.433 409 189 7 145 542 134 527 5.53e-121 366
MS.gene22789.t1 MTR_8g023150 42.209 507 272 8 44 538 81 578 8.00e-121 368
MS.gene22789.t1 MTR_3g008720 47.188 409 190 7 145 542 134 527 5.68e-120 364
MS.gene22789.t1 MTR_3g033690 47.073 410 189 8 145 542 133 526 7.37e-120 363
MS.gene22789.t1 MTR_1g086190 38.230 531 287 13 40 543 48 564 1.53e-119 364
MS.gene22789.t1 MTR_4g035980 43.860 456 230 9 99 542 98 539 2.08e-119 363
MS.gene22789.t1 MTR_3g008700 46.472 411 194 7 143 542 132 527 2.31e-119 362
MS.gene22789.t1 MTR_7g108890 44.037 436 198 9 144 542 136 562 1.31e-117 359
MS.gene22789.t1 MTR_1g083490 35.888 535 317 10 23 538 44 571 4.70e-114 350
MS.gene22789.t1 MTR_1g083470 34.177 553 341 10 3 538 20 566 4.83e-114 350
MS.gene22789.t1 MTR_1g083500 34.177 553 341 10 3 538 20 566 4.83e-114 350
MS.gene22789.t1 MTR_1g083510 35.271 499 292 7 72 541 86 582 6.98e-114 350
MS.gene22789.t1 MTR_7g108900 41.614 471 238 11 106 543 95 561 1.13e-113 349
MS.gene22789.t1 MTR_1g086210 36.961 533 294 11 44 542 45 569 1.75e-113 348
MS.gene22789.t1 MTR_7g112590 37.302 504 284 9 69 544 86 585 1.03e-112 347
MS.gene22789.t1 MTR_4g005180 36.719 512 300 9 44 538 49 553 3.09e-112 345
MS.gene22789.t1 MTR_4g005170 36.914 512 299 9 44 538 67 571 3.66e-112 347
MS.gene22789.t1 MTR_4g124550 38.618 492 275 10 69 542 111 593 3.50e-110 341
MS.gene22789.t1 MTR_0458s0030 56.786 280 107 3 272 542 40 314 1.44e-109 330
MS.gene22789.t1 MTR_1g088040 56.786 280 107 3 272 542 40 314 1.44e-109 330
MS.gene22789.t1 MTR_2g044660 36.796 568 286 13 39 544 78 634 8.54e-109 338
MS.gene22789.t1 MTR_8g104580 40.040 497 227 12 68 542 53 500 2.45e-107 330
MS.gene22789.t1 MTR_2g436040 34.429 517 298 10 44 539 47 543 1.40e-105 329
MS.gene22789.t1 MTR_7g110560 34.035 570 319 16 3 542 7 549 3.02e-104 324
MS.gene22789.t1 MTR_4g120280 33.966 527 315 10 37 541 56 571 3.49e-102 320
MS.gene22789.t1 MTR_4g120290 32.836 536 331 8 26 541 45 571 2.47e-101 317
MS.gene22789.t1 MTR_7g110440 33.945 545 318 10 30 542 32 566 1.07e-98 310
MS.gene22789.t1 MTR_2g436050 33.397 521 321 9 37 541 53 563 1.11e-98 310
MS.gene22789.t1 MTR_3g095920 33.391 578 313 13 1 541 21 563 3.72e-97 306
MS.gene22789.t1 MTR_7g110490 35.110 544 315 11 30 543 32 567 1.32e-96 305
MS.gene22789.t1 MTR_7g110510 35.110 544 315 11 30 543 32 567 1.32e-96 305
MS.gene22789.t1 MTR_8g093460 33.979 568 321 13 7 544 10 553 8.37e-95 300
MS.gene22789.t1 MTR_2g044810 52.590 251 109 2 301 542 216 465 1.37e-92 291
MS.gene22789.t1 MTR_0618s0020 54.185 227 95 1 325 542 2 228 2.81e-85 264
MS.gene22789.t1 MTR_7g110420 33.880 549 311 14 30 537 32 569 5.90e-82 267
MS.gene22789.t1 MTR_7g110430 32.402 537 303 10 30 542 32 532 1.75e-81 265
MS.gene22789.t1 MTR_8g088610 40.774 336 178 7 218 539 45 373 2.09e-80 256
MS.gene22789.t1 MTR_2g105560 41.639 305 156 4 247 542 48 339 2.88e-75 242
MS.gene22789.t1 MTR_5g083620 36.873 339 194 6 219 542 23 356 8.10e-74 239
MS.gene22789.t1 MTR_0458s0010 34.423 459 248 11 106 542 91 518 1.87e-72 240
MS.gene22789.t1 MTR_7g107180 41.158 311 162 5 242 542 8 307 2.28e-71 231
MS.gene22789.t1 MTR_7g111560 32.692 520 304 15 43 542 63 556 3.99e-70 235
MS.gene22789.t1 MTR_6g024165 36.778 329 178 8 216 533 27 336 2.71e-58 197
MS.gene22789.t1 MTR_6g088810 33.333 381 227 11 172 531 3 377 4.82e-57 195
MS.gene22789.t1 MTR_1g086540 36.213 301 172 6 243 531 52 344 1.18e-56 193
MS.gene22789.t1 MTR_6g012800 37.413 286 159 5 243 515 8 286 2.21e-55 189
MS.gene22789.t1 MTR_2g039530 40.594 303 157 10 217 509 30 319 5.26e-55 189
MS.gene22789.t1 MTR_8g102380 35.473 296 172 5 249 531 88 377 1.77e-52 183
MS.gene22789.t1 MTR_7g011530 34.545 275 162 3 243 504 8 277 1.33e-48 171
MS.gene22789.t1 MTR_7g102600 33.446 296 187 4 243 531 101 393 1.98e-48 173
MS.gene22789.t1 MTR_7g092780 32.542 295 186 5 247 531 96 387 3.25e-47 169
MS.gene22789.t1 MTR_6g042660 34.601 263 158 5 247 504 43 296 4.68e-47 167
MS.gene22789.t1 MTR_5g093970 33.677 291 187 4 242 531 44 329 4.63e-46 165
MS.gene22789.t1 MTR_5g012600 32.915 319 192 7 232 534 50 362 1.93e-45 164
MS.gene22789.t1 MTR_6g042690 34.432 273 160 5 242 504 40 303 2.67e-45 162
MS.gene22789.t1 MTR_8g102380 36.667 240 136 3 249 475 88 324 3.84e-44 159
MS.gene22789.t1 MTR_5g095490 32.323 297 183 5 247 531 67 357 1.39e-43 159
MS.gene22789.t1 MTR_1g033050 33.684 285 173 6 232 504 4 284 4.86e-43 156
MS.gene22789.t1 MTR_4g124740 32.890 301 173 9 243 531 56 339 1.40e-41 153
MS.gene22789.t1 MTR_2g033970 29.097 299 194 6 243 532 58 347 4.15e-41 152
MS.gene22789.t1 MTR_5g083590 29.206 315 163 6 238 542 4 268 3.34e-40 147
MS.gene22789.t1 MTR_5g088300 31.633 294 182 5 242 531 38 316 1.08e-36 139
MS.gene22789.t1 MTR_2g436600 27.703 296 193 8 243 532 57 337 2.51e-36 138
MS.gene22789.t1 MTR_4g074290 29.618 314 203 7 226 531 58 361 4.51e-35 135
MS.gene22789.t1 MTR_2g073390 28.889 315 204 8 226 531 58 361 2.79e-34 133
MS.gene22789.t1 MTR_8g036225 30.147 272 172 5 243 504 35 298 1.02e-32 128
MS.gene22789.t1 MTR_5g088290 30.556 288 190 3 242 526 49 329 2.05e-32 127
MS.gene22789.t1 MTR_4g051810 29.866 298 197 5 236 531 30 317 6.21e-32 125
MS.gene22789.t1 MTR_5g088280 29.965 287 190 4 242 525 40 318 3.62e-31 124
MS.gene22789.t1 MTR_0009s0350 28.014 282 192 5 226 501 58 334 4.17e-31 124
MS.gene22789.t1 MTR_0009s0340 28.014 282 192 5 226 501 58 334 4.17e-31 124
MS.gene22789.t1 MTR_2g436070 26.349 315 218 7 2 312 17 321 1.18e-30 123
MS.gene22789.t1 MTR_6g025590 30.653 199 119 4 210 400 29 216 6.92e-27 109
MS.gene22789.t1 MTR_0408s0030 43.182 88 50 0 417 504 36 123 5.49e-21 90.1
MS.gene22789.t1 MTR_6g024200 33.537 164 96 4 369 531 125 276 3.83e-18 85.1
MS.gene22789.t1 MTR_7g108790 30.128 156 106 3 40 194 34 187 3.03e-17 80.5
MS.gene22789.t1 MTR_4g035870 39.216 102 53 3 99 195 96 193 6.76e-15 73.9
MS.gene22789.t1 MTR_4g035880 39.604 101 52 3 99 194 96 192 6.89e-15 73.9
MS.gene22789.t1 MTR_7g102580 45.349 86 37 2 315 395 73 153 1.31e-14 72.0
MS.gene22789.t1 MTR_4g130790 27.854 219 137 8 264 473 48 254 2.83e-14 73.6
MS.gene22789.t1 MTR_4g035905 38.182 110 55 4 94 194 87 192 2.16e-13 69.3
MS.gene22789.t1 MTR_1g088540 29.921 127 87 2 69 194 15 140 4.69e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22789.t1 AT3G05620 62.157 547 186 6 9 544 7 543 0.0 699
MS.gene22789.t1 AT4G33220 50.612 490 213 6 79 542 37 523 8.51e-171 494
MS.gene22789.t1 AT3G43270 49.582 478 228 5 76 542 50 525 3.74e-167 484
MS.gene22789.t1 AT4G33220 53.086 405 166 4 159 542 1 402 9.26e-152 441
MS.gene22789.t1 AT5G53370 46.217 489 238 7 72 543 106 586 6.75e-151 445
MS.gene22789.t1 AT5G53370 46.217 489 238 7 72 543 142 622 2.50e-150 445
MS.gene22789.t1 AT3G49220 43.954 521 265 6 40 543 87 597 1.57e-147 437
MS.gene22789.t1 AT3G49220 43.954 521 265 6 40 543 132 642 8.02e-147 437
MS.gene22789.t1 AT2G45220 43.063 555 253 16 2 542 6 511 3.60e-137 407
MS.gene22789.t1 AT1G23200 47.346 471 211 8 98 542 95 554 1.34e-136 407
MS.gene22789.t1 AT1G11580 44.420 448 226 5 102 538 118 553 4.00e-132 396
MS.gene22789.t1 AT4G02300 41.767 498 258 8 62 542 50 532 5.15e-132 395
MS.gene22789.t1 AT1G11580 44.420 448 226 5 102 538 139 574 9.13e-132 396
MS.gene22789.t1 AT3G05610 39.394 528 275 11 40 542 58 565 4.32e-131 397
MS.gene22789.t1 AT5G27870 37.838 518 295 6 40 542 57 562 1.02e-129 395
MS.gene22789.t1 AT2G26440 41.085 516 278 9 44 542 41 547 1.58e-128 386
MS.gene22789.t1 AT1G53830 44.731 465 231 6 102 542 125 587 2.09e-128 387
MS.gene22789.t1 AT2G43050 43.813 493 241 10 63 544 51 518 7.72e-128 384
MS.gene22789.t1 AT4G02320 40.400 500 250 7 73 542 37 518 1.46e-127 383
MS.gene22789.t1 AT3G10710 43.802 484 244 10 68 542 97 561 2.16e-127 384
MS.gene22789.t1 AT3G14310 42.283 473 239 5 102 542 122 592 4.92e-126 382
MS.gene22789.t1 AT3G60730 41.988 493 247 7 78 542 38 519 1.15e-125 378
MS.gene22789.t1 AT5G51490 43.035 481 244 10 77 542 71 536 4.87e-124 375
MS.gene22789.t1 AT4G00190 44.843 446 202 8 106 542 64 474 3.95e-123 370
MS.gene22789.t1 AT4G02330 42.259 478 233 9 106 542 96 571 3.91e-122 371
MS.gene22789.t1 AT3G47400 39.227 543 290 10 24 542 68 594 1.71e-120 367
MS.gene22789.t1 AT3G59010 43.607 438 234 6 107 542 102 528 3.32e-119 362
MS.gene22789.t1 AT5G04960 40.787 483 261 7 68 540 95 562 3.36e-118 360
MS.gene22789.t1 AT5G51500 41.164 481 253 10 77 542 75 540 1.05e-117 358
MS.gene22789.t1 AT5G04970 43.396 477 226 12 103 542 151 620 9.70e-117 358
MS.gene22789.t1 AT4G33230 38.302 530 300 12 31 542 86 606 1.96e-116 357
MS.gene22789.t1 AT1G02810 40.562 498 223 8 106 542 92 577 1.02e-115 355
MS.gene22789.t1 AT3G10720 41.632 478 243 11 98 542 141 615 1.48e-115 355
MS.gene22789.t1 AT1G53840 39.010 505 280 11 52 536 85 581 5.25e-115 353
MS.gene22789.t1 AT5G49180 36.932 528 306 11 31 538 46 566 1.13e-114 352
MS.gene22789.t1 AT2G47550 44.304 474 213 14 106 542 99 558 1.38e-114 351
MS.gene22789.t1 AT2G26450 40.246 487 266 12 68 542 138 611 2.14e-114 352
MS.gene22789.t1 AT5G20860 40.133 451 232 10 108 542 110 538 2.57e-105 327
MS.gene22789.t1 AT4G03930 42.446 417 209 8 140 542 125 524 1.02e-104 324
MS.gene22789.t1 AT3G06830 35.472 530 299 12 40 540 51 566 1.21e-104 325
MS.gene22789.t1 AT1G11590 42.271 414 214 6 140 542 125 524 1.51e-102 319
MS.gene22789.t1 AT3G10720 55.769 260 105 3 292 542 1 259 4.89e-102 308
MS.gene22789.t1 AT3G14300 36.821 497 292 8 52 533 471 960 6.22e-102 329
MS.gene22789.t1 AT3G27980 40.494 405 217 5 147 542 108 497 3.71e-98 306
MS.gene22789.t1 AT4G15980 44.380 347 180 4 206 540 355 700 5.34e-92 296
MS.gene22789.t1 AT4G15980 44.380 347 180 4 206 540 365 710 9.47e-92 296
MS.gene22789.t1 AT5G09760 36.090 532 277 17 36 530 41 546 5.85e-89 284
MS.gene22789.t1 AT5G09760 35.888 535 280 17 33 530 64 572 1.04e-88 285
MS.gene22789.t1 AT5G64640 33.272 547 279 15 38 534 91 601 4.80e-86 278
MS.gene22789.t1 AT5G20860 36.009 436 213 9 108 527 110 495 1.51e-80 261
MS.gene22789.t1 AT3G62170 29.982 557 326 14 37 542 45 588 5.96e-76 251
MS.gene22789.t1 AT2G47030 29.983 597 348 15 3 542 5 588 1.32e-75 250
MS.gene22789.t1 AT1G11370 44.487 263 132 2 219 472 29 286 1.94e-72 233
MS.gene22789.t1 AT2G47040 31.041 509 280 12 95 542 97 595 9.11e-72 240
MS.gene22789.t1 AT2G36710 34.884 301 186 4 243 536 93 390 3.46e-55 191
MS.gene22789.t1 AT5G19730 33.333 354 203 8 202 531 37 381 7.27e-54 187
MS.gene22789.t1 AT2G36700 32.153 339 207 6 198 531 13 333 1.18e-52 182
MS.gene22789.t1 AT1G05310 33.333 300 187 5 242 531 92 388 1.21e-49 176
MS.gene22789.t1 AT3G29090 34.615 312 179 7 243 537 9 312 3.25e-49 172
MS.gene22789.t1 AT3G17060 31.544 298 190 5 242 532 47 337 1.33e-48 172
MS.gene22789.t1 AT1G44980 44.149 188 103 1 219 404 54 241 5.04e-46 162
MS.gene22789.t1 AT5G47500 29.428 367 226 8 183 533 11 360 8.08e-46 165
MS.gene22789.t1 AT2G21610 31.615 291 186 5 243 531 53 332 8.51e-45 162
MS.gene22789.t1 AT2G21610 31.615 291 186 5 243 531 58 337 1.61e-44 161
MS.gene22789.t1 AT5G07430 34.021 291 178 7 247 531 73 355 7.52e-43 157
MS.gene22789.t1 AT5G18990 32.595 316 189 7 228 531 20 323 3.91e-41 151
MS.gene22789.t1 AT3G24130 30.938 320 194 9 228 531 20 328 1.15e-40 150
MS.gene22789.t1 AT5G55590 31.788 302 188 7 242 531 83 378 1.47e-38 145
MS.gene22789.t1 AT5G55590 32.927 246 150 5 242 475 83 325 2.94e-38 143
MS.gene22789.t1 AT3G49220 30.345 290 184 5 40 321 132 411 1.54e-37 144
MS.gene22789.t1 AT5G61680 29.912 341 202 9 204 531 42 358 1.32e-36 140
MS.gene22789.t1 AT2G19150 31.081 296 189 5 251 538 51 339 1.37e-36 139
MS.gene22789.t1 AT5G26810 32.258 279 168 5 242 504 35 308 3.61e-36 138
MS.gene22789.t1 AT5G07420 31.081 296 190 7 242 531 68 355 1.21e-33 131
MS.gene22789.t1 AT1G69940 27.891 294 189 7 249 531 74 355 7.40e-33 129
MS.gene22789.t1 AT2G19150 32.618 233 145 4 251 475 51 279 9.89e-33 127
MS.gene22789.t1 AT5G07410 27.551 294 190 7 249 531 74 355 1.30e-32 129
MS.gene22789.t1 AT2G47280 28.808 302 195 7 243 533 37 329 1.65e-29 119
MS.gene22789.t1 AT3G62820 27.979 193 124 5 5 194 9 189 5.83e-14 71.2
MS.gene22789.t1 AT5G62360 32.593 135 85 3 58 190 64 194 7.55e-13 68.2
MS.gene22789.t1 AT1G62770 28.000 200 120 6 7 194 8 195 3.87e-11 63.2

Find 139 sgRNAs with CRISPR-Local

Find 152 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCCTCACAACCTACATATT+TGG 0.095781 7.2:+4304666 MS.gene22789:CDS
CAGACCAATCTGCATTCTTT+AGG 0.260515 7.2:+4304407 MS.gene22789:CDS
TGTTAATGTGTAGCTGTATC+TGG 0.260734 7.2:+4304301 MS.gene22789:intron
GCCTCACAACCTACATATTT+GGG 0.269773 7.2:+4304667 MS.gene22789:CDS
AGCTTAATCGCTTACCCTTT+AGG 0.279269 7.2:+4303776 MS.gene22789:CDS
AAGCTTGCATATCTTGAGTT+TGG 0.290313 7.2:-4303291 None:intergenic
AATCCAAGATAGTTATGTTT+TGG 0.298560 7.2:+4304645 MS.gene22789:CDS
CTTGATCAAATGATGGTAAA+AGG 0.313433 7.2:-4303234 None:intergenic
GTGAACTTAACACCTGTTCT+AGG 0.327842 7.2:-4304943 None:intergenic
TACGGTGAATACAGGAATTA+TGG 0.331114 7.2:+4304805 MS.gene22789:CDS
TGGACTTGGAGGGCCTGTTC+TGG 0.341206 7.2:-4303383 None:intergenic
CTACATATTTGGGGAGGCCT+TGG 0.347308 7.2:+4304677 MS.gene22789:CDS
TTCTTTAGGTGTAGCATAGA+AGG 0.349482 7.2:+4304421 MS.gene22789:CDS
GGTTCCTTAACGGCGGTTCA+TGG 0.359467 7.2:+4304917 MS.gene22789:CDS
TCAGAGCTTGCATGGTCGTT+AGG 0.365066 7.2:+4303553 MS.gene22789:CDS
TGTTTGTGAGGCATGAGTTT+TGG 0.365441 7.2:-4303345 None:intergenic
GATCTTTGTCATGTTGTTGA+TGG 0.368569 7.2:-4303458 None:intergenic
GCCACGGCTTGATGGTTTAC+CGG 0.370851 7.2:-4304370 None:intergenic
TCAGCCTCTGTCATCCATTC+AGG 0.371531 7.2:-4303853 None:intergenic
GAGCTCCTTGCAATCTTCTA+TGG 0.371794 7.2:-4303515 None:intergenic
TACCGTGAATGCGAAATCTA+TGG 0.377605 7.2:+4304484 MS.gene22789:CDS
CACGCAATGCCACGGCTTGA+TGG 0.381995 7.2:-4304378 None:intergenic
AACTAGTACTGATGAAAGTT+TGG 0.382732 7.2:+4303825 MS.gene22789:CDS
ATGTCTGAGGGAATTTCATC+TGG 0.384523 7.2:-4303268 None:intergenic
TTACCGGTCCAGCAGTGTTC+CGG 0.387620 7.2:-4304354 None:intergenic
CAGAGCTTGCATGGTCGTTA+GGG 0.395199 7.2:+4303554 MS.gene22789:CDS
TCTACCAGCGAGCGATGAAC+CGG 0.402703 7.2:-4304830 None:intergenic
ACGGTTCAGCGGTTCCTTAA+CGG 0.416002 7.2:+4304907 MS.gene22789:CDS
GATGCAGTTGTTGCGTTGGA+TGG 0.417977 7.2:+4303916 MS.gene22789:CDS
AGGCCAAAACATAACTATCT+TGG 0.418609 7.2:-4304648 None:intergenic
CCGCACTTAGCCATGCTTCG+AGG 0.428133 7.2:-4303627 None:intergenic
CAGCTCCTAGTCATAGCAAT+AGG 0.443935 7.2:+4303977 MS.gene22789:CDS
CCGCTGAACCGTAAAATAAC+CGG 0.446817 7.2:-4304896 None:intergenic
TAACACATACATGAGTAGTA+TGG 0.446857 7.2:+4304726 MS.gene22789:CDS
ATGACATTCCGGAACACTGC+TGG 0.450390 7.2:+4304346 MS.gene22789:CDS
CATGTTGTTGATGGCACCTA+TGG 0.452823 7.2:-4303449 None:intergenic
ACAGAACATTACTGATAAGC+TGG 0.453691 7.2:-4303741 None:intergenic
ATTAAAGACGCTTCTGCCGC+CGG 0.455714 7.2:+4304877 MS.gene22789:CDS
TAACAGCTTCGTTGATTGTA+CGG 0.460625 7.2:-4303951 None:intergenic
CGTCTTGAGAGTTACATTAG+TGG 0.463916 7.2:+4303700 MS.gene22789:CDS
TCATGCAAGGTAGTGTTCCT+TGG 0.464611 7.2:-4303802 None:intergenic
GCAACCATGAACCGCCGTTA+AGG 0.465728 7.2:-4304921 None:intergenic
CATAACGAGCTAACCAGAAC+AGG 0.467307 7.2:+4303370 MS.gene22789:CDS
ACTTTGCATTAGACACTTTG+TGG 0.470978 7.2:+4304782 MS.gene22789:CDS
TTCCATAGATTTCGCATTCA+CGG 0.471515 7.2:-4304486 None:intergenic
GGTTCATGGTTGCCTAGAAC+AGG 0.472411 7.2:+4304931 MS.gene22789:CDS
TTGCAAGGGACATGACATTC+CGG 0.473496 7.2:+4304335 MS.gene22789:CDS
AGTTCCACTTCCATTACAAA+AGG 0.474475 7.2:+4304570 MS.gene22789:CDS
CTTTGTGGTACGGTGAATAC+AGG 0.485605 7.2:+4304797 MS.gene22789:CDS
GTGAAGCCTGTGCTTTGATG+TGG 0.491231 7.2:-4304622 None:intergenic
ATTCCGGAACACTGCTGGAC+CGG 0.491888 7.2:+4304351 MS.gene22789:CDS
AATCAAGACACATGTATTGA+AGG 0.492230 7.2:+4303658 MS.gene22789:CDS
ACAGGTGTTAAGTTCACAGC+AGG 0.494156 7.2:+4304949 MS.gene22789:CDS
ACATGTATTGAAGGGTTTGA+AGG 0.494549 7.2:+4303667 MS.gene22789:CDS
CGCTCGCTGGTAGAGTCAAA+TGG 0.495741 7.2:+4304839 MS.gene22789:CDS
AGAACTCTACTTACCAAAAG+TGG 0.497125 7.2:-4304154 None:intergenic
ACCTATGGCTTCATTGATTG+TGG 0.498951 7.2:-4303434 None:intergenic
ACATGTTATCTATGTGAAGA+AGG 0.503880 7.2:+4304002 MS.gene22789:CDS
ATGACAGAAGTTGGACTTGG+AGG 0.503881 7.2:-4303394 None:intergenic
GTAAAAGGATGAGAATGAAA+AGG 0.505964 7.2:-4303219 None:intergenic
GCAGCATTAATGACAGAAGT+TGG 0.507875 7.2:-4303403 None:intergenic
AAAGTTTGGAGTTTCCTGAA+TGG 0.509972 7.2:+4303839 MS.gene22789:CDS
AACCTCGAGGGTGGCTTGAG+TGG 0.510238 7.2:+4304752 MS.gene22789:CDS
AGTGTTCCTTGGAGACCTAA+AGG 0.513393 7.2:-4303791 None:intergenic
GTTCTAGAATATTCCTTCCA+AGG 0.522274 7.2:-4304694 None:intergenic
ATGATCGTTGGTGATGGTAT+TGG 0.525137 7.2:+4304072 MS.gene22789:CDS
GTGTTCCTTGGAGACCTAAA+GGG 0.526257 7.2:-4303790 None:intergenic
TGACAGAAGTTGGACTTGGA+GGG 0.528123 7.2:-4303393 None:intergenic
CTGGGAAGGGTTTCATTGCA+AGG 0.529923 7.2:+4304320 MS.gene22789:CDS
TTAATGACAGAAGTTGGACT+TGG 0.530794 7.2:-4303397 None:intergenic
GCATTAGACACTTTGTGGTA+CGG 0.536809 7.2:+4304787 MS.gene22789:CDS
GAGAGAACTTGATCAAATGA+TGG 0.538479 7.2:-4303241 None:intergenic
TTTGATTGCACAAGCTTGCA+TGG 0.540945 7.2:+4303312 MS.gene22789:CDS
CGAGGGTGGCTTGAGTGGCT+CGG 0.541369 7.2:+4304757 MS.gene22789:CDS
GCTCTGACACAGAGAAATCA+AGG 0.541696 7.2:-4303537 None:intergenic
TCTCTGTGTCAGAGCTTGCA+TGG 0.541979 7.2:+4303545 MS.gene22789:CDS
ATGCAGTTGTTGCGTTGGAT+GGG 0.542294 7.2:+4303917 MS.gene22789:CDS
ATCAAGACACATGTATTGAA+GGG 0.544777 7.2:+4303659 MS.gene22789:CDS
CAAGGCCTCCCCAAATATGT+AGG 0.548118 7.2:-4304676 None:intergenic
ATGTGTAGCTGTATCTGGGA+AGG 0.551122 7.2:+4304306 MS.gene22789:intron
TGGGAAGGGTTTCATTGCAA+GGG 0.552908 7.2:+4304321 MS.gene22789:CDS
ATTGCGATTGCTTGTAACAA+TGG 0.557427 7.2:-4304100 None:intergenic
GCTGGTAGAGTCAAATGGCC+TGG 0.558166 7.2:+4304844 MS.gene22789:CDS
ATATTTGGGGAGGCCTTGGA+AGG 0.559715 7.2:+4304681 MS.gene22789:CDS
TGTGTAGCTGTATCTGGGAA+GGG 0.561947 7.2:+4304307 MS.gene22789:intron
TGCAGATGCAGTTGTTGCGT+TGG 0.563751 7.2:+4303912 MS.gene22789:CDS
AAAAGTCCACATCAAAGCAC+AGG 0.565467 7.2:+4304616 MS.gene22789:CDS
ATCAGTACTAGTTTCATGCA+AGG 0.565775 7.2:-4303815 None:intergenic
AAAAGTGGCAGTTCGAAAAG+TGG 0.570595 7.2:-4304139 None:intergenic
TACACCTAAAGAATGCAGAT+TGG 0.571861 7.2:-4304411 None:intergenic
ATCGCAATTTCATGCAAGGA+TGG 0.575589 7.2:+4304115 MS.gene22789:CDS
AAGGTTACAATCACAGCTCA+AGG 0.578151 7.2:+4304589 MS.gene22789:CDS
AACATCATGATCGTTGGTGA+TGG 0.582464 7.2:+4304066 MS.gene22789:CDS
TGTGAAGAAGGGACTATACA+AGG 0.586315 7.2:+4304014 MS.gene22789:CDS
GTTAATGTGTAGCTGTATCT+GGG 0.587683 7.2:+4304302 MS.gene22789:intron
TCTTGAGTTTGGATGTCTGA+GGG 0.587826 7.2:-4303280 None:intergenic
GTTGTTGCGTTGGATGGGAG+CGG 0.587962 7.2:+4303922 MS.gene22789:CDS
AGCAATCGCAATTTCATGCA+AGG 0.589039 7.2:+4304111 MS.gene22789:CDS
CATGTTATCTATGTGAAGAA+GGG 0.590596 7.2:+4304003 MS.gene22789:CDS
GGACCCGGTTCATCGCTCGC+TGG 0.591181 7.2:+4304826 MS.gene22789:CDS
GAAAAGGAAATTCACTAGCA+AGG 0.591237 7.2:-4303203 None:intergenic
ATCACCAACGATCATGATGT+TGG 0.592216 7.2:-4304064 None:intergenic
AGTGTGCGTAAAGTGTGTCT+TGG 0.597316 7.2:-4304447 None:intergenic
ACGAAGGAAACCTCGAAGCA+TGG 0.597380 7.2:+4303617 MS.gene22789:CDS
ATGACCAACATCATGATCGT+TGG 0.598022 7.2:+4304060 MS.gene22789:CDS
ATCTTGAGTTTGGATGTCTG+AGG 0.599334 7.2:-4303281 None:intergenic
GCTCGTTATGAATGTTTGTG+AGG 0.604269 7.2:-4303357 None:intergenic
CAGAACATTACTGATAAGCT+GGG 0.605848 7.2:-4303740 None:intergenic
TTACAATCACAGCTCAAGGT+AGG 0.609803 7.2:+4304593 MS.gene22789:CDS
CTTCTATGGCAAGTTGCTCG+CGG 0.617529 7.2:-4303501 None:intergenic
GCTTACCCTTTAGGTCTCCA+AGG 0.618807 7.2:+4303785 MS.gene22789:CDS
CATGGTCGTTAGGGGAGATG+AGG 0.619966 7.2:+4303563 MS.gene22789:CDS
ACTTGCCATAGAAGATTGCA+AGG 0.620029 7.2:+4303510 MS.gene22789:CDS
CCCCAAATATGTAGGTTGTG+AGG 0.623360 7.2:-4304668 None:intergenic
GTAGTATGGTTCAACCTCGA+GGG 0.629470 7.2:+4304740 MS.gene22789:CDS
AGTAGTATGGTTCAACCTCG+AGG 0.630686 7.2:+4304739 MS.gene22789:CDS
TGAATCGACACGCAATGCCA+CGG 0.630967 7.2:-4304386 None:intergenic
GACAGAACTGCGCAGTACGA+AGG 0.633449 7.2:+4303601 MS.gene22789:CDS
GAGATGAGGAGAATTCGAGC+CGG 0.635377 7.2:+4303577 MS.gene22789:CDS
CTACCAGCGAGCGATGAACC+GGG 0.640025 7.2:-4304829 None:intergenic
TGTCTGAGGGAATTTCATCT+GGG 0.640715 7.2:-4303267 None:intergenic
GTACTGCGCAGTTCTGTCGC+CGG 0.644383 7.2:-4303596 None:intergenic
CCTCACAACCTACATATTTG+GGG 0.650108 7.2:+4304668 MS.gene22789:CDS
AGAGCTTGCATGGTCGTTAG+GGG 0.652304 7.2:+4303555 MS.gene22789:CDS
TGTCTCCTATTGCTATGACT+AGG 0.654035 7.2:-4303982 None:intergenic
GTATGGTTCAACCTCGAGGG+TGG 0.654064 7.2:+4304743 MS.gene22789:CDS
TCTTTAATGACATGATAACC+AGG 0.655480 7.2:-4304862 None:intergenic
CCTCGAAGCATGGCTAAGTG+CGG 0.658255 7.2:+4303627 MS.gene22789:CDS
ACCACAATCAATGAAGCCAT+AGG 0.663784 7.2:+4303433 MS.gene22789:CDS
ACCGGTAAACCATCAAGCCG+TGG 0.664465 7.2:+4304369 MS.gene22789:CDS
GAATACAGGAATTATGGACC+CGG 0.671183 7.2:+4304811 MS.gene22789:CDS
CACAACCTACATATTTGGGG+AGG 0.675764 7.2:+4304671 MS.gene22789:CDS
CTACTTAAATCTAAGCCGCA+CGG 0.678224 7.2:+4303883 MS.gene22789:CDS
AGCCACTCAAGCCACCCTCG+AGG 0.711855 7.2:-4304754 None:intergenic
GTTCAGCGGTTCCTTAACGG+CGG 0.714803 7.2:+4304910 MS.gene22789:CDS
CAGGTGTTAAGTTCACAGCA+GGG 0.718376 7.2:+4304950 MS.gene22789:CDS
CTGAACCGTAAAATAACCGG+CGG 0.728593 7.2:-4304893 None:intergenic
GTTTCCTGAATGGATGACAG+AGG 0.756653 7.2:+4303849 MS.gene22789:CDS
GCATCTGCAATCTTACCGTG+CGG 0.785544 7.2:-4303898 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TGAATTGGTATATACTGAAT+TGG + chr7.2:4304264-4304283 MS.gene22789:intron 25.0%
!! AATCCAAGATAGTTATGTTT+TGG + chr7.2:4304645-4304664 MS.gene22789:CDS 25.0%
AATCAAGACACATGTATTGA+AGG + chr7.2:4303658-4303677 MS.gene22789:CDS 30.0%
ACATGTTATCTATGTGAAGA+AGG + chr7.2:4304002-4304021 MS.gene22789:CDS 30.0%
ATCAAGACACATGTATTGAA+GGG + chr7.2:4303659-4303678 MS.gene22789:CDS 30.0%
ATTCCCAAAAATGAAGTCTA+TGG - chr7.2:4304512-4304531 None:intergenic 30.0%
CATGTTATCTATGTGAAGAA+GGG + chr7.2:4304003-4304022 MS.gene22789:CDS 30.0%
CTTGATCAAATGATGGTAAA+AGG - chr7.2:4303237-4303256 None:intergenic 30.0%
GTAAAAGGATGAGAATGAAA+AGG - chr7.2:4303222-4303241 None:intergenic 30.0%
TAACACATACATGAGTAGTA+TGG + chr7.2:4304726-4304745 MS.gene22789:CDS 30.0%
TCTTTAATGACATGATAACC+AGG - chr7.2:4304865-4304884 None:intergenic 30.0%
! ACACACTCTTTTCAATATGT+AGG - chr7.2:4304237-4304256 None:intergenic 30.0%
! GTGATTGTAACCTTTTGTAA+TGG - chr7.2:4304583-4304602 None:intergenic 30.0%
!! AACTAGTACTGATGAAAGTT+TGG + chr7.2:4303825-4303844 MS.gene22789:CDS 30.0%
!! ATAGACTTCATTTTTGGGAA+TGG + chr7.2:4304511-4304530 MS.gene22789:CDS 30.0%
!! GAACCATAGACTTCATTTTT+GGG + chr7.2:4304506-4304525 MS.gene22789:CDS 30.0%
AACAGTATTTCTCTAGCGTA+AGG + chr7.2:4304182-4304201 MS.gene22789:intron 35.0%
AAGCTTGCATATCTTGAGTT+TGG - chr7.2:4303294-4303313 None:intergenic 35.0%
ACAGAACATTACTGATAAGC+TGG - chr7.2:4303744-4303763 None:intergenic 35.0%
ACATGTATTGAAGGGTTTGA+AGG + chr7.2:4303667-4303686 MS.gene22789:CDS 35.0%
ACTTTGCATTAGACACTTTG+TGG + chr7.2:4304782-4304801 MS.gene22789:CDS 35.0%
AGAACTCTACTTACCAAAAG+TGG - chr7.2:4304157-4304176 None:intergenic 35.0%
AGGCCAAAACATAACTATCT+TGG - chr7.2:4304651-4304670 None:intergenic 35.0%
AGTTCCACTTCCATTACAAA+AGG + chr7.2:4304570-4304589 MS.gene22789:CDS 35.0%
ATTGCGATTGCTTGTAACAA+TGG - chr7.2:4304103-4304122 None:intergenic 35.0%
CAGAACATTACTGATAAGCT+GGG - chr7.2:4303743-4303762 None:intergenic 35.0%
GAAAAGGAAATTCACTAGCA+AGG - chr7.2:4303206-4303225 None:intergenic 35.0%
GAGAGAACTTGATCAAATGA+TGG - chr7.2:4303244-4303263 None:intergenic 35.0%
GAGTGTGTTAGAGAATGAAT+TGG + chr7.2:4304249-4304268 MS.gene22789:intron 35.0%
GATCTTTGTCATGTTGTTGA+TGG - chr7.2:4303461-4303480 None:intergenic 35.0%
GTTAATGTGTAGCTGTATCT+GGG + chr7.2:4304302-4304321 MS.gene22789:intron 35.0%
TACACCTAAAGAATGCAGAT+TGG - chr7.2:4304414-4304433 None:intergenic 35.0%
TACGGTGAATACAGGAATTA+TGG + chr7.2:4304805-4304824 MS.gene22789:CDS 35.0%
TGTTAATGTGTAGCTGTATC+TGG + chr7.2:4304301-4304320 MS.gene22789:intron 35.0%
TTAATGACAGAAGTTGGACT+TGG - chr7.2:4303400-4303419 None:intergenic 35.0%
TTCCATAGATTTCGCATTCA+CGG - chr7.2:4304489-4304508 None:intergenic 35.0%
TTCTTTAGGTGTAGCATAGA+AGG + chr7.2:4304421-4304440 MS.gene22789:CDS 35.0%
! AAAGTTTGGAGTTTCCTGAA+TGG + chr7.2:4303839-4303858 MS.gene22789:CDS 35.0%
! ATCAGTACTAGTTTCATGCA+AGG - chr7.2:4303818-4303837 None:intergenic 35.0%
! GGAACCATAGACTTCATTTT+TGG + chr7.2:4304505-4304524 MS.gene22789:CDS 35.0%
! TAACAGCTTCGTTGATTGTA+CGG - chr7.2:4303954-4303973 None:intergenic 35.0%
!! GTAACCTTTTGTAATGGAAG+TGG - chr7.2:4304577-4304596 None:intergenic 35.0%
!! GTTCTAGAATATTCCTTCCA+AGG - chr7.2:4304697-4304716 None:intergenic 35.0%
AAAAGTCCACATCAAAGCAC+AGG + chr7.2:4304616-4304635 MS.gene22789:CDS 40.0%
AAAAGTGGCAGTTCGAAAAG+TGG - chr7.2:4304142-4304161 None:intergenic 40.0%
AAGGTTACAATCACAGCTCA+AGG + chr7.2:4304589-4304608 MS.gene22789:CDS 40.0%
ACCACAATCAATGAAGCCAT+AGG + chr7.2:4303433-4303452 MS.gene22789:CDS 40.0%
ACTTGCCATAGAAGATTGCA+AGG + chr7.2:4303510-4303529 MS.gene22789:CDS 40.0%
AGCAATCGCAATTTCATGCA+AGG + chr7.2:4304111-4304130 MS.gene22789:CDS 40.0%
AGCTTAATCGCTTACCCTTT+AGG + chr7.2:4303776-4303795 MS.gene22789:CDS 40.0%
ATCACCAACGATCATGATGT+TGG - chr7.2:4304067-4304086 None:intergenic 40.0%
ATCGCAATTTCATGCAAGGA+TGG + chr7.2:4304115-4304134 MS.gene22789:CDS 40.0%
ATCTTGAGTTTGGATGTCTG+AGG - chr7.2:4303284-4303303 None:intergenic 40.0%
ATGACCAACATCATGATCGT+TGG + chr7.2:4304060-4304079 MS.gene22789:CDS 40.0%
ATGTCTGAGGGAATTTCATC+TGG - chr7.2:4303271-4303290 None:intergenic 40.0%
CAGACCAATCTGCATTCTTT+AGG + chr7.2:4304407-4304426 MS.gene22789:CDS 40.0%
CCTCACAACCTACATATTTG+GGG + chr7.2:4304668-4304687 MS.gene22789:CDS 40.0%
CGTCTTGAGAGTTACATTAG+TGG + chr7.2:4303700-4303719 MS.gene22789:CDS 40.0%
CTACTTAAATCTAAGCCGCA+CGG + chr7.2:4303883-4303902 MS.gene22789:CDS 40.0%
GAATACAGGAATTATGGACC+CGG + chr7.2:4304811-4304830 MS.gene22789:CDS 40.0%
GCAGCATTAATGACAGAAGT+TGG - chr7.2:4303406-4303425 None:intergenic 40.0%
GCATTAGACACTTTGTGGTA+CGG + chr7.2:4304787-4304806 MS.gene22789:CDS 40.0%
GCCTCACAACCTACATATTT+GGG + chr7.2:4304667-4304686 MS.gene22789:CDS 40.0%
GCTCGTTATGAATGTTTGTG+AGG - chr7.2:4303360-4303379 None:intergenic 40.0%
GTGAACTTAACACCTGTTCT+AGG - chr7.2:4304946-4304965 None:intergenic 40.0%
TACCGTGAATGCGAAATCTA+TGG + chr7.2:4304484-4304503 MS.gene22789:CDS 40.0%
TCTTGAGTTTGGATGTCTGA+GGG - chr7.2:4303283-4303302 None:intergenic 40.0%
TGTCTCCTATTGCTATGACT+AGG - chr7.2:4303985-4304004 None:intergenic 40.0%
TGTCTGAGGGAATTTCATCT+GGG - chr7.2:4303270-4303289 None:intergenic 40.0%
TGTGAAGAAGGGACTATACA+AGG + chr7.2:4304014-4304033 MS.gene22789:CDS 40.0%
TTACAATCACAGCTCAAGGT+AGG + chr7.2:4304593-4304612 MS.gene22789:CDS 40.0%
TTTGATTGCACAAGCTTGCA+TGG + chr7.2:4303312-4303331 MS.gene22789:CDS 40.0%
! AACATCATGATCGTTGGTGA+TGG + chr7.2:4304066-4304085 MS.gene22789:CDS 40.0%
! ACCTATGGCTTCATTGATTG+TGG - chr7.2:4303437-4303456 None:intergenic 40.0%
! TGTTTGTGAGGCATGAGTTT+TGG - chr7.2:4303348-4303367 None:intergenic 40.0%
!! ATGATCGTTGGTGATGGTAT+TGG + chr7.2:4304072-4304091 MS.gene22789:CDS 40.0%
!!! ACTTTTCGAACTGCCACTTT+TGG + chr7.2:4304141-4304160 MS.gene22789:CDS 40.0%
ACAGGTGTTAAGTTCACAGC+AGG + chr7.2:4304949-4304968 MS.gene22789:CDS 45.0%
AGTAGTATGGTTCAACCTCG+AGG + chr7.2:4304739-4304758 MS.gene22789:CDS 45.0%
AGTGTGCGTAAAGTGTGTCT+TGG - chr7.2:4304450-4304469 None:intergenic 45.0%
AGTGTTCCTTGGAGACCTAA+AGG - chr7.2:4303794-4303813 None:intergenic 45.0%
ATGACAGAAGTTGGACTTGG+AGG - chr7.2:4303397-4303416 None:intergenic 45.0%
ATGCAGTTGTTGCGTTGGAT+GGG + chr7.2:4303917-4303936 MS.gene22789:CDS 45.0%
ATGTGTAGCTGTATCTGGGA+AGG + chr7.2:4304306-4304325 MS.gene22789:intron 45.0%
CACAACCTACATATTTGGGG+AGG + chr7.2:4304671-4304690 MS.gene22789:CDS 45.0%
CAGCTCCTAGTCATAGCAAT+AGG + chr7.2:4303977-4303996 MS.gene22789:CDS 45.0%
CAGGTGTTAAGTTCACAGCA+GGG + chr7.2:4304950-4304969 MS.gene22789:CDS 45.0%
CATAACGAGCTAACCAGAAC+AGG + chr7.2:4303370-4303389 MS.gene22789:CDS 45.0%
CCCCAAATATGTAGGTTGTG+AGG - chr7.2:4304671-4304690 None:intergenic 45.0%
CCGCTGAACCGTAAAATAAC+CGG - chr7.2:4304899-4304918 None:intergenic 45.0%
CTGAACCGTAAAATAACCGG+CGG - chr7.2:4304896-4304915 None:intergenic 45.0%
CTTTGTGGTACGGTGAATAC+AGG + chr7.2:4304797-4304816 MS.gene22789:CDS 45.0%
GAGCTCCTTGCAATCTTCTA+TGG - chr7.2:4303518-4303537 None:intergenic 45.0%
GCTCTGACACAGAGAAATCA+AGG - chr7.2:4303540-4303559 None:intergenic 45.0%
GGCCTCACAACCTACATATT+TGG + chr7.2:4304666-4304685 MS.gene22789:CDS 45.0%
GTAGTATGGTTCAACCTCGA+GGG + chr7.2:4304740-4304759 MS.gene22789:CDS 45.0%
GTGTTCCTTGGAGACCTAAA+GGG - chr7.2:4303793-4303812 None:intergenic 45.0%
GTTTCCTGAATGGATGACAG+AGG + chr7.2:4303849-4303868 MS.gene22789:CDS 45.0%
TCATGCAAGGTAGTGTTCCT+TGG - chr7.2:4303805-4303824 None:intergenic 45.0%
TGACAGAAGTTGGACTTGGA+GGG - chr7.2:4303396-4303415 None:intergenic 45.0%
TGGGAAGGGTTTCATTGCAA+GGG + chr7.2:4304321-4304340 MS.gene22789:CDS 45.0%
TGTGTAGCTGTATCTGGGAA+GGG + chr7.2:4304307-4304326 MS.gene22789:intron 45.0%
TTGCAAGGGACATGACATTC+CGG + chr7.2:4304335-4304354 MS.gene22789:CDS 45.0%
!! CATGTTGTTGATGGCACCTA+TGG - chr7.2:4303452-4303471 None:intergenic 45.0%
!! CCGGTTATTTTACGGTTCAG+CGG + chr7.2:4304896-4304915 MS.gene22789:CDS 45.0%
!! TTCTGCCGCCGGTTATTTTA+CGG + chr7.2:4304888-4304907 MS.gene22789:CDS 45.0%
ACGAAGGAAACCTCGAAGCA+TGG + chr7.2:4303617-4303636 MS.gene22789:CDS 50.0%
ACGGTTCAGCGGTTCCTTAA+CGG + chr7.2:4304907-4304926 MS.gene22789:CDS 50.0%
AGAGCTTGCATGGTCGTTAG+GGG + chr7.2:4303555-4303574 MS.gene22789:CDS 50.0%
ATATTTGGGGAGGCCTTGGA+AGG + chr7.2:4304681-4304700 MS.gene22789:CDS 50.0%
ATGACATTCCGGAACACTGC+TGG + chr7.2:4304346-4304365 MS.gene22789:CDS 50.0%
ATTAAAGACGCTTCTGCCGC+CGG + chr7.2:4304877-4304896 MS.gene22789:CDS 50.0%
CAAGGCCTCCCCAAATATGT+AGG - chr7.2:4304679-4304698 None:intergenic 50.0%
CAGAGCTTGCATGGTCGTTA+GGG + chr7.2:4303554-4303573 MS.gene22789:CDS 50.0%
CTACATATTTGGGGAGGCCT+TGG + chr7.2:4304677-4304696 MS.gene22789:CDS 50.0%
CTGGGAAGGGTTTCATTGCA+AGG + chr7.2:4304320-4304339 MS.gene22789:CDS 50.0%
CTTCTATGGCAAGTTGCTCG+CGG - chr7.2:4303504-4303523 None:intergenic 50.0%
GAGATGAGGAGAATTCGAGC+CGG + chr7.2:4303577-4303596 MS.gene22789:CDS 50.0%
GATGCAGTTGTTGCGTTGGA+TGG + chr7.2:4303916-4303935 MS.gene22789:CDS 50.0%
GCATCTGCAATCTTACCGTG+CGG - chr7.2:4303901-4303920 None:intergenic 50.0%
GCTTACCCTTTAGGTCTCCA+AGG + chr7.2:4303785-4303804 MS.gene22789:CDS 50.0%
GGTTCATGGTTGCCTAGAAC+AGG + chr7.2:4304931-4304950 MS.gene22789:CDS 50.0%
GTGAAGCCTGTGCTTTGATG+TGG - chr7.2:4304625-4304644 None:intergenic 50.0%
TCAGAGCTTGCATGGTCGTT+AGG + chr7.2:4303553-4303572 MS.gene22789:CDS 50.0%
TCAGCCTCTGTCATCCATTC+AGG - chr7.2:4303856-4303875 None:intergenic 50.0%
TCTCTGTGTCAGAGCTTGCA+TGG + chr7.2:4303545-4303564 MS.gene22789:CDS 50.0%
TGAATCGACACGCAATGCCA+CGG - chr7.2:4304389-4304408 None:intergenic 50.0%
TGCAGATGCAGTTGTTGCGT+TGG + chr7.2:4303912-4303931 MS.gene22789:CDS 50.0%
ACCGGTAAACCATCAAGCCG+TGG + chr7.2:4304369-4304388 MS.gene22789:CDS 55.0%
ATTCCGGAACACTGCTGGAC+CGG + chr7.2:4304351-4304370 MS.gene22789:CDS 55.0%
CATGGTCGTTAGGGGAGATG+AGG + chr7.2:4303563-4303582 MS.gene22789:CDS 55.0%
CCTCGAAGCATGGCTAAGTG+CGG + chr7.2:4303627-4303646 MS.gene22789:CDS 55.0%
CGCTCGCTGGTAGAGTCAAA+TGG + chr7.2:4304839-4304858 MS.gene22789:CDS 55.0%
GACAGAACTGCGCAGTACGA+AGG + chr7.2:4303601-4303620 MS.gene22789:CDS 55.0%
GCAACCATGAACCGCCGTTA+AGG - chr7.2:4304924-4304943 None:intergenic 55.0%
GCTGGTAGAGTCAAATGGCC+TGG + chr7.2:4304844-4304863 MS.gene22789:CDS 55.0%
GGTTCCTTAACGGCGGTTCA+TGG + chr7.2:4304917-4304936 MS.gene22789:CDS 55.0%
GTATGGTTCAACCTCGAGGG+TGG + chr7.2:4304743-4304762 MS.gene22789:CDS 55.0%
GTTCAGCGGTTCCTTAACGG+CGG + chr7.2:4304910-4304929 MS.gene22789:CDS 55.0%
GTTGTTGCGTTGGATGGGAG+CGG + chr7.2:4303922-4303941 MS.gene22789:CDS 55.0%
TCTACCAGCGAGCGATGAAC+CGG - chr7.2:4304833-4304852 None:intergenic 55.0%
TTACCGGTCCAGCAGTGTTC+CGG - chr7.2:4304357-4304376 None:intergenic 55.0%
! GCCACGGCTTGATGGTTTAC+CGG - chr7.2:4304373-4304392 None:intergenic 55.0%
AACCTCGAGGGTGGCTTGAG+TGG + chr7.2:4304752-4304771 MS.gene22789:CDS 60.0%
CACGCAATGCCACGGCTTGA+TGG - chr7.2:4304381-4304400 None:intergenic 60.0%
CCGCACTTAGCCATGCTTCG+AGG - chr7.2:4303630-4303649 None:intergenic 60.0%
CTACCAGCGAGCGATGAACC+GGG - chr7.2:4304832-4304851 None:intergenic 60.0%
GTACTGCGCAGTTCTGTCGC+CGG - chr7.2:4303599-4303618 None:intergenic 60.0%
TGGACTTGGAGGGCCTGTTC+TGG - chr7.2:4303386-4303405 None:intergenic 60.0%
AGCCACTCAAGCCACCCTCG+AGG - chr7.2:4304757-4304776 None:intergenic 65.0%
CGAGGGTGGCTTGAGTGGCT+CGG + chr7.2:4304757-4304776 MS.gene22789:CDS 65.0%
GGACCCGGTTCATCGCTCGC+TGG + chr7.2:4304826-4304845 MS.gene22789:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 4303199 4304984 4303199 ID=MS.gene22789
chr7.2 mRNA 4303199 4304984 4303199 ID=MS.gene22789.t1;Parent=MS.gene22789
chr7.2 exon 4303199 4304162 4303199 ID=MS.gene22789.t1.exon1;Parent=MS.gene22789.t1
chr7.2 CDS 4303199 4304162 4303199 ID=cds.MS.gene22789.t1;Parent=MS.gene22789.t1
chr7.2 exon 4304314 4304984 4304314 ID=MS.gene22789.t1.exon2;Parent=MS.gene22789.t1
chr7.2 CDS 4304314 4304984 4304314 ID=cds.MS.gene22789.t1;Parent=MS.gene22789.t1
Gene Sequence

>MS.gene22789

ATGGCCTTGCTAGTGAATTTCCTTTTCATTCTCATCCTTTTACCATCATTTGATCAAGTTCTCTCATTCCCAGATGAAATTCCCTCAGACATCCAAACTCAAGATATGCAAGCTTTGATTGCACAAGCTTGCATGGATATTGAAAACCAAAACTCATGCCTCACAAACATTCATAACGAGCTAACCAGAACAGGCCCTCCAAGTCCAACTTCTGTCATTAATGCTGCACTTAGAACCACAATCAATGAAGCCATAGGTGCCATCAACAACATGACAAAGATCAGTACATTCTCTGTTAATAACCGCGAGCAACTTGCCATAGAAGATTGCAAGGAGCTCCTTGATTTCTCTGTGTCAGAGCTTGCATGGTCGTTAGGGGAGATGAGGAGAATTCGAGCCGGCGACAGAACTGCGCAGTACGAAGGAAACCTCGAAGCATGGCTAAGTGCGGCGCTTAGCAATCAAGACACATGTATTGAAGGGTTTGAAGGCACTGATAGACGTCTTGAGAGTTACATTAGTGGAAGCTTAACACAAGTAACCCAGCTTATCAGTAATGTTCTGTCTTTGTACACTCAGCTTAATCGCTTACCCTTTAGGTCTCCAAGGAACACTACCTTGCATGAAACTAGTACTGATGAAAGTTTGGAGTTTCCTGAATGGATGACAGAGGCTGATCAAGAGCTACTTAAATCTAAGCCGCACGGTAAGATTGCAGATGCAGTTGTTGCGTTGGATGGGAGCGGTCAGTACCGTACAATCAACGAAGCTGTTAATGCAGCTCCTAGTCATAGCAATAGGAGACATGTTATCTATGTGAAGAAGGGACTATACAAGGAGAATATTGATATGAAGAAGAAGATGACCAACATCATGATCGTTGGTGATGGTATTGGTCAAACCATTGTTACAAGCAATCGCAATTTCATGCAAGGATGGACCACTTTTCGAACTGCCACTTTTGGTAAGTAGAGTTCTTATTTAACAGTATTTCTCTAGCGTAAGGAATTGAAATCTGTGTTTTTTGTACTATCACCTACATATTGAAAAGAGTGTGTTAGAGAATGAATTGGTATATACTGAATTGGTTGATAATTTGAAATGTTAATGTGTAGCTGTATCTGGGAAGGGTTTCATTGCAAGGGACATGACATTCCGGAACACTGCTGGACCGGTAAACCATCAAGCCGTGGCATTGCGTGTCGATTCAGACCAATCTGCATTCTTTAGGTGTAGCATAGAAGGAAACCAAGACACACTTTACGCACACTCACTGAGACAGTTCTACCGTGAATGCGAAATCTATGGAACCATAGACTTCATTTTTGGGAATGGAGCTGCTGTGCTACAAAACTGCAAGATATACACAAGAGTTCCACTTCCATTACAAAAGGTTACAATCACAGCTCAAGGTAGGAAAAGTCCACATCAAAGCACAGGCTTCACAATCCAAGATAGTTATGTTTTGGCCTCACAACCTACATATTTGGGGAGGCCTTGGAAGGAATATTCTAGAACAGTTTACATTAACACATACATGAGTAGTATGGTTCAACCTCGAGGGTGGCTTGAGTGGCTCGGTAACTTTGCATTAGACACTTTGTGGTACGGTGAATACAGGAATTATGGACCCGGTTCATCGCTCGCTGGTAGAGTCAAATGGCCTGGTTATCATGTCATTAAAGACGCTTCTGCCGCCGGTTATTTTACGGTTCAGCGGTTCCTTAACGGCGGTTCATGGTTGCCTAGAACAGGTGTTAAGTTCACAGCAGGGCTAAGCAATTGA
Protein sequence

>MS.gene22789.t1

MALLVNFLFILILLPSFDQVLSFPDEIPSDIQTQDMQALIAQACMDIENQNSCLTNIHNELTRTGPPSPTSVINAALRTTINEAIGAINNMTKISTFSVNNREQLAIEDCKELLDFSVSELAWSLGEMRRIRAGDRTAQYEGNLEAWLSAALSNQDTCIEGFEGTDRRLESYISGSLTQVTQLISNVLSLYTQLNRLPFRSPRNTTLHETSTDESLEFPEWMTEADQELLKSKPHGKIADAVVALDGSGQYRTINEAVNAAPSHSNRRHVIYVKKGLYKENIDMKKKMTNIMIVGDGIGQTIVTSNRNFMQGWTTFRTATFAVSGKGFIARDMTFRNTAGPVNHQAVALRVDSDQSAFFRCSIEGNQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFTIQDSYVLASQPTYLGRPWKEYSRTVYINTYMSSMVQPRGWLEWLGNFALDTLWYGEYRNYGPGSSLAGRVKWPGYHVIKDASAAGYFTVQRFLNGGSWLPRTGVKFTAGLSN