AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22798

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22798.t1 MTR_7g112490 96.021 377 15 0 1 377 19 395 0.0 760
MS.gene22798.t1 MTR_7g112490 96.021 377 15 0 1 377 1 377 0.0 759
MS.gene22798.t1 MTR_1g083690 76.243 362 75 4 1 362 1 351 0.0 553
MS.gene22798.t1 MTR_4g120410 59.392 362 138 2 1 362 1 353 9.14e-164 463
MS.gene22798.t1 MTR_2g435550 60.055 363 135 3 1 362 1 354 1.30e-163 462
MS.gene22798.t1 MTR_2g435550 63.473 334 113 2 29 362 16 340 5.32e-162 458
MS.gene22798.t1 MTR_2g435550 59.475 343 129 3 1 342 1 334 3.46e-152 434
MS.gene22798.t1 MTR_7g080170 50.599 334 135 4 52 361 57 384 8.53e-110 330
MS.gene22798.t1 MTR_7g021530 48.923 325 151 5 50 362 47 368 8.41e-105 315
MS.gene22798.t1 MTR_7g021530 48.923 325 151 5 50 362 88 409 3.16e-104 315
MS.gene22798.t1 MTR_8g017240 50.479 313 138 5 50 362 45 340 1.95e-102 307
MS.gene22798.t1 MTR_4g037470 45.062 324 171 3 52 370 58 379 1.75e-100 306
MS.gene22798.t1 MTR_2g090190 46.082 319 166 3 55 369 55 371 1.10e-97 298
MS.gene22798.t1 MTR_4g037470 43.844 333 171 4 52 370 58 388 2.20e-97 298
MS.gene22798.t1 MTR_7g070510 43.865 326 175 3 52 371 53 376 3.84e-96 294
MS.gene22798.t1 MTR_7g021530 48.980 294 135 5 81 362 28 318 2.99e-92 281
MS.gene22798.t1 MTR_4g013295 43.182 308 168 3 56 362 43 344 1.66e-89 274
MS.gene22798.t1 MTR_7g021530 48.913 276 127 4 50 313 47 320 1.75e-87 267
MS.gene22798.t1 MTR_7g021530 48.913 276 127 4 50 313 88 361 5.30e-87 268
MS.gene22798.t1 MTR_7g080170 48.582 282 115 4 104 361 1 276 2.65e-81 254
MS.gene22798.t1 MTR_1g016620 42.345 307 158 5 60 362 38 329 6.64e-74 233
MS.gene22798.t1 MTR_7g021530 41.232 211 110 4 50 248 47 255 2.01e-47 162
MS.gene22798.t1 MTR_7g021530 41.232 211 110 4 50 248 88 296 7.64e-47 162
MS.gene22798.t1 MTR_6g087000 29.179 329 167 7 62 362 90 380 6.18e-33 130
MS.gene22798.t1 MTR_6g087000 27.692 390 206 9 11 362 29 380 7.72e-33 130
MS.gene22798.t1 MTR_2g020970 28.358 335 180 9 56 364 44 344 4.79e-29 115
MS.gene22798.t1 MTR_4g118340 26.885 305 171 6 73 359 68 338 5.19e-29 116
MS.gene22798.t1 MTR_2g020970 28.443 334 179 9 57 364 45 344 8.07e-29 116
MS.gene22798.t1 MTR_3g105730 30.924 249 118 9 93 338 67 264 5.03e-25 103
MS.gene22798.t1 MTR_3g105730 30.400 250 118 9 93 338 45 242 5.37e-25 103
MS.gene22798.t1 MTR_1g014640 31.325 249 117 9 93 338 110 307 9.83e-25 103
MS.gene22798.t1 MTR_1g013400 31.325 249 117 9 93 338 110 307 9.83e-25 103
MS.gene22798.t1 MTR_2g078760 33.455 275 126 12 88 361 35 253 5.62e-24 99.8
MS.gene22798.t1 MTR_2g078760 33.455 275 126 12 88 361 114 332 1.79e-23 100
MS.gene22798.t1 MTR_1g115570 27.463 335 174 15 39 366 71 343 2.03e-23 100
MS.gene22798.t1 MTR_2g008850 39.888 178 82 8 183 359 79 232 5.32e-23 96.7
MS.gene22798.t1 MTR_2g008850 39.888 178 82 8 183 359 125 278 1.94e-22 96.3
MS.gene22798.t1 MTR_6g081850 30.605 281 138 9 94 361 82 318 3.81e-22 96.3
MS.gene22798.t1 MTR_3g068200 29.483 329 182 11 3 321 33 321 4.25e-22 97.1
MS.gene22798.t1 MTR_3g074610 38.916 203 96 10 159 359 103 279 1.80e-21 93.6
MS.gene22798.t1 MTR_5g009370 31.295 278 131 11 57 323 52 280 3.76e-21 93.6
MS.gene22798.t1 MTR_5g063940 39.326 178 83 8 183 359 79 232 3.80e-21 91.7
MS.gene22798.t1 MTR_5g063940 39.326 178 83 8 183 359 126 279 9.83e-21 91.3
MS.gene22798.t1 MTR_4g094208 36.019 211 104 11 154 359 90 274 1.45e-20 90.9
MS.gene22798.t1 MTR_8g463130 31.379 290 134 14 79 362 52 282 2.29e-20 90.5
MS.gene22798.t1 MTR_8g463130 31.868 273 123 13 94 362 41 254 2.55e-20 89.7
MS.gene22798.t1 MTR_4g094542 32.683 205 111 10 158 361 186 364 3.67e-20 91.3
MS.gene22798.t1 MTR_1g050520 26.603 312 173 11 64 369 391 652 6.25e-20 92.0
MS.gene22798.t1 MTR_5g080680 29.134 254 146 7 68 321 109 328 1.60e-19 89.7
MS.gene22798.t1 MTR_4g125810 31.739 230 120 9 91 320 253 445 4.97e-19 89.0
MS.gene22798.t1 MTR_3g104710 29.057 265 143 8 59 320 262 484 1.90e-18 87.4
MS.gene22798.t1 MTR_3g091060 28.041 296 156 9 65 359 99 338 3.74e-18 85.1
MS.gene22798.t1 MTR_3g464700 30.000 260 131 10 62 320 89 298 1.59e-17 83.2
MS.gene22798.t1 MTR_3g464650 28.664 307 155 13 62 361 65 314 2.56e-17 82.4
MS.gene22798.t1 MTR_1g116260 27.414 321 151 14 91 367 80 362 2.74e-16 80.1
MS.gene22798.t1 MTR_4g116420 27.018 285 156 11 85 364 118 355 5.13e-16 79.3
MS.gene22798.t1 MTR_3g107880 28.125 288 135 13 91 364 63 292 6.43e-16 78.2
MS.gene22798.t1 MTR_8g102550 30.870 230 118 8 91 320 152 340 6.64e-16 79.0
MS.gene22798.t1 MTR_1g015110 30.901 233 124 9 91 320 290 488 6.88e-16 79.3
MS.gene22798.t1 MTR_3g107880 28.125 288 135 13 91 364 120 349 7.39e-16 78.6
MS.gene22798.t1 MTR_3g107880 28.125 288 135 13 91 364 121 350 7.58e-16 78.6
MS.gene22798.t1 MTR_5g071550 26.861 309 174 12 54 361 117 374 9.92e-16 78.2
MS.gene22798.t1 MTR_1g086350 28.571 238 120 11 91 321 118 312 2.66e-15 77.0
MS.gene22798.t1 MTR_1g086350 28.571 238 120 11 91 321 102 296 2.97e-15 76.6
MS.gene22798.t1 MTR_2g040500 31.950 241 124 9 91 319 267 479 3.01e-15 77.4
MS.gene22798.t1 MTR_8g074930 31.111 180 86 8 193 346 45 212 1.33e-14 73.9
MS.gene22798.t1 MTR_1g028300 40.164 122 56 4 200 321 226 330 1.44e-14 74.7
MS.gene22798.t1 MTR_3g032660 27.090 299 147 12 88 356 65 322 1.72e-14 74.7
MS.gene22798.t1 MTR_3g032700 27.090 299 147 12 88 356 65 322 2.28e-14 74.3
MS.gene22798.t1 MTR_1g067210 26.950 282 144 9 91 346 76 321 2.69e-14 73.9
MS.gene22798.t1 MTR_8g074930 29.665 209 95 10 193 361 157 353 2.99e-14 73.9
MS.gene22798.t1 MTR_1g086350 33.793 145 72 5 182 321 85 210 3.28e-14 72.8
MS.gene22798.t1 MTR_1g014190 26.070 257 143 7 91 321 52 287 4.01e-14 73.2
MS.gene22798.t1 MTR_1g014190 26.070 257 143 7 91 321 90 325 6.75e-14 72.8
MS.gene22798.t1 MTR_3g105880 27.799 259 136 10 91 321 52 287 9.95e-14 72.0
MS.gene22798.t1 MTR_4g123080 24.768 323 178 12 58 363 54 328 1.12e-13 72.0
MS.gene22798.t1 MTR_4g123080 24.768 323 178 12 58 363 72 346 1.25e-13 72.0
MS.gene22798.t1 MTR_3g105880 27.799 259 136 10 91 321 52 287 2.03e-13 70.9
MS.gene22798.t1 MTR_2g078760 29.956 227 109 10 86 311 112 289 2.04e-13 70.5
MS.gene22798.t1 MTR_1g112840 32.727 165 77 7 195 335 161 315 5.73e-13 70.1
MS.gene22798.t1 MTR_1g110210 28.159 277 146 15 94 364 71 300 6.26e-13 69.3
MS.gene22798.t1 MTR_2g033000 28.497 193 108 6 183 364 170 343 7.39e-13 69.7
MS.gene22798.t1 MTR_3g032590 31.156 199 103 8 181 356 141 328 1.34e-12 68.9
MS.gene22798.t1 MTR_7g090530 26.449 276 145 12 88 339 66 307 1.46e-12 68.9
MS.gene22798.t1 MTR_1g083750 30.556 216 122 11 165 372 24 219 1.48e-12 68.6
MS.gene22798.t1 MTR_1g083750 30.556 216 122 11 165 372 116 311 1.98e-12 68.6
MS.gene22798.t1 MTR_7g029240 36.496 137 75 5 182 315 135 262 2.48e-12 68.2
MS.gene22798.t1 MTR_4g119830 30.337 178 91 4 170 323 264 432 3.32e-12 68.2
MS.gene22798.t1 MTR_7g112430 32.990 194 105 9 182 367 131 307 4.25e-12 67.4
MS.gene22798.t1 MTR_4g007440 31.973 147 73 4 183 321 160 287 5.54e-12 67.0
MS.gene22798.t1 MTR_1g019760 30.693 202 114 10 182 374 128 312 1.23e-11 66.2
MS.gene22798.t1 MTR_1g019760 30.693 202 114 10 182 374 128 312 1.83e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22798.t1 AT3G05640 72.253 364 85 3 1 362 1 350 0.0 544
MS.gene22798.t1 AT3G05640 72.253 364 85 3 1 362 1 350 0.0 544
MS.gene22798.t1 AT3G05640 72.253 364 85 3 1 362 1 350 0.0 544
MS.gene22798.t1 AT5G27930 70.360 361 98 5 1 360 1 353 0.0 541
MS.gene22798.t1 AT5G27930 70.360 361 98 5 1 360 1 353 0.0 541
MS.gene22798.t1 AT5G27930 71.197 309 80 5 1 308 1 301 1.77e-165 466
MS.gene22798.t1 AT3G16800 54.247 365 150 2 1 363 1 350 1.09e-137 396
MS.gene22798.t1 AT3G16800 54.247 365 150 2 1 363 1 350 1.09e-137 396
MS.gene22798.t1 AT3G16800 54.247 365 150 2 1 363 1 350 1.09e-137 396
MS.gene22798.t1 AT3G16800 57.778 270 99 1 94 363 1 255 2.95e-106 313
MS.gene22798.t1 AT3G16800 57.778 270 99 1 94 363 1 255 2.95e-106 313
MS.gene22798.t1 AT1G79630 44.928 345 157 3 50 362 57 400 5.78e-106 321
MS.gene22798.t1 AT1G79630 44.928 345 157 3 50 362 53 396 7.58e-106 320
MS.gene22798.t1 AT3G02750 43.236 377 181 4 14 361 21 393 2.53e-104 316
MS.gene22798.t1 AT3G02750 43.236 377 181 4 14 361 21 393 2.53e-104 316
MS.gene22798.t1 AT1G16220 45.732 328 159 3 50 362 54 377 9.89e-104 315
MS.gene22798.t1 AT5G36250 46.201 329 159 3 50 361 57 384 9.50e-102 308
MS.gene22798.t1 AT5G36250 44.606 343 158 4 50 361 57 398 6.91e-98 299
MS.gene22798.t1 AT3G02750 39.563 412 181 5 14 361 21 428 2.11e-96 297
MS.gene22798.t1 AT4G03415 46.349 315 159 4 63 370 70 381 4.15e-96 295
MS.gene22798.t1 AT4G03415 46.349 315 159 4 63 370 70 381 4.15e-96 295
MS.gene22798.t1 AT4G03415 46.349 315 159 4 63 370 70 381 4.15e-96 295
MS.gene22798.t1 AT1G79630 45.541 314 138 3 81 362 18 330 5.84e-96 293
MS.gene22798.t1 AT1G79630 45.541 314 138 3 81 362 18 330 5.84e-96 293
MS.gene22798.t1 AT1G03590 45.484 310 164 4 55 361 55 362 1.20e-94 290
MS.gene22798.t1 AT5G01700 43.711 318 167 4 52 368 39 345 3.32e-89 274
MS.gene22798.t1 AT5G01700 44.737 304 156 4 66 368 4 296 1.51e-88 270
MS.gene22798.t1 AT5G36250 46.918 292 136 4 50 323 57 347 2.82e-86 265
MS.gene22798.t1 AT1G79630 44.330 291 129 3 104 362 1 290 6.70e-82 256
MS.gene22798.t1 AT1G79630 44.330 291 129 3 104 362 1 290 6.70e-82 256
MS.gene22798.t1 AT1G79630 44.330 291 129 3 104 362 1 290 6.70e-82 256
MS.gene22798.t1 AT1G79630 44.330 291 129 3 104 362 1 290 6.70e-82 256
MS.gene22798.t1 AT4G32950 41.801 311 152 5 59 368 41 323 4.84e-76 238
MS.gene22798.t1 AT5G26010 42.718 309 155 6 60 367 43 330 9.47e-72 227
MS.gene22798.t1 AT3G16800 49.145 234 102 2 1 232 1 219 3.79e-70 220
MS.gene22798.t1 AT4G32950 42.629 251 115 5 59 308 41 263 2.61e-58 191
MS.gene22798.t1 AT2G20050 29.538 325 164 8 62 359 109 395 3.88e-33 131
MS.gene22798.t1 AT2G20050 29.538 325 164 8 62 359 109 395 4.06e-33 131
MS.gene22798.t1 AT3G06270 29.373 303 155 8 50 326 40 309 4.46e-29 115
MS.gene22798.t1 AT2G20630 34.432 273 122 13 88 359 60 276 4.74e-26 106
MS.gene22798.t1 AT2G20630 34.043 282 127 14 88 366 60 285 7.61e-26 105
MS.gene22798.t1 AT5G10740 31.227 269 130 9 91 359 64 277 5.51e-25 104
MS.gene22798.t1 AT5G10740 31.227 269 130 9 91 359 64 277 5.51e-25 104
MS.gene22798.t1 AT5G24940 31.227 269 130 9 91 359 64 277 6.09e-25 105
MS.gene22798.t1 AT4G28400 31.429 280 129 13 87 362 41 261 5.27e-24 100
MS.gene22798.t1 AT4G28400 31.429 280 129 13 87 362 63 283 9.56e-24 99.8
MS.gene22798.t1 AT4G31750 30.588 255 120 10 93 344 66 266 1.17e-23 100
MS.gene22798.t1 AT4G31750 30.588 255 120 10 93 344 66 266 1.17e-23 100
MS.gene22798.t1 AT4G31750 30.196 255 121 9 93 344 66 266 1.25e-23 100
MS.gene22798.t1 AT5G59220 33.755 237 109 9 91 321 148 342 8.54e-22 96.7
MS.gene22798.t1 AT2G25620 29.861 288 148 12 91 372 128 367 2.48e-20 92.0
MS.gene22798.t1 AT2G25620 29.861 288 148 12 91 372 128 367 2.48e-20 92.0
MS.gene22798.t1 AT1G78200 34.314 204 111 8 157 359 54 235 4.00e-20 89.0
MS.gene22798.t1 AT1G78200 34.314 204 111 8 157 359 54 235 4.00e-20 89.0
MS.gene22798.t1 AT1G43900 28.938 273 143 9 65 336 128 350 5.04e-20 90.9
MS.gene22798.t1 AT1G78200 34.314 204 111 8 157 359 99 280 7.69e-20 89.0
MS.gene22798.t1 AT1G78200 34.314 204 111 8 157 359 99 280 7.69e-20 89.0
MS.gene22798.t1 AT1G78200 34.314 204 111 8 157 359 99 280 7.69e-20 89.0
MS.gene22798.t1 AT1G34750 36.111 180 90 8 183 361 126 281 8.77e-20 89.0
MS.gene22798.t1 AT1G34750 36.111 180 90 8 183 361 126 281 8.77e-20 89.0
MS.gene22798.t1 AT1G34750 36.111 180 90 8 183 361 126 281 8.77e-20 89.0
MS.gene22798.t1 AT5G53140 26.970 330 191 10 9 338 52 331 1.20e-19 90.1
MS.gene22798.t1 AT5G53140 26.970 330 191 10 9 338 52 331 1.20e-19 90.1
MS.gene22798.t1 AT1G07430 30.328 244 111 9 91 321 157 354 2.31e-19 89.7
MS.gene22798.t1 AT3G15260 37.640 178 86 8 183 359 133 286 7.34e-19 86.3
MS.gene22798.t1 AT3G15260 37.640 178 86 8 183 359 133 286 7.34e-19 86.3
MS.gene22798.t1 AT3G11410 30.488 246 122 9 87 320 133 341 1.41e-18 87.0
MS.gene22798.t1 AT3G62260 30.037 273 141 13 91 357 27 255 1.63e-18 85.5
MS.gene22798.t1 AT3G62260 29.818 275 143 13 91 359 116 346 3.65e-18 85.5
MS.gene22798.t1 AT3G62260 29.818 275 143 13 91 359 117 347 4.19e-18 85.5
MS.gene22798.t1 AT2G40180 27.707 314 165 14 58 362 126 386 5.33e-18 85.1
MS.gene22798.t1 AT4G26080 31.687 243 126 9 78 320 159 361 2.44e-17 83.6
MS.gene22798.t1 AT5G57050 30.870 230 121 9 91 320 120 311 2.60e-17 83.2
MS.gene22798.t1 AT5G57050 30.870 230 121 9 91 320 160 351 3.65e-17 82.8
MS.gene22798.t1 AT2G34740 34.078 179 94 9 182 359 177 332 3.88e-17 82.0
MS.gene22798.t1 AT1G67820 29.304 273 143 11 49 321 75 297 1.90e-16 80.9
MS.gene22798.t1 AT1G67820 29.304 273 143 11 49 321 111 333 2.83e-16 80.5
MS.gene22798.t1 AT3G51470 25.507 345 173 13 50 372 12 294 2.92e-16 79.3
MS.gene22798.t1 AT1G22280 34.270 178 92 8 183 359 131 284 3.84e-16 78.6
MS.gene22798.t1 AT1G22280 34.270 178 92 8 183 359 125 278 4.07e-16 78.2
MS.gene22798.t1 AT3G51470 25.507 345 173 13 50 372 56 338 4.56e-16 79.3
MS.gene22798.t1 AT5G51760 38.000 150 76 4 171 320 189 321 5.97e-16 79.0
MS.gene22798.t1 AT5G51760 38.000 150 76 4 171 320 219 351 7.51e-16 79.0
MS.gene22798.t1 AT3G17250 25.000 292 162 10 89 369 156 401 9.62e-16 78.6
MS.gene22798.t1 AT2G30020 27.508 309 158 14 62 361 141 392 1.24e-15 78.2
MS.gene22798.t1 AT1G48040 29.268 287 151 12 91 369 116 358 1.45e-15 77.8
MS.gene22798.t1 AT3G51370 29.952 207 97 8 193 361 72 268 1.75e-15 76.6
MS.gene22798.t1 AT3G55050 31.250 208 89 10 196 362 165 359 2.22e-15 77.4
MS.gene22798.t1 AT3G55050 31.250 208 89 10 196 362 165 359 2.22e-15 77.4
MS.gene22798.t1 AT1G07160 28.155 309 157 14 62 361 124 376 2.94e-15 77.0
MS.gene22798.t1 AT1G47380 32.653 196 109 9 182 372 127 304 3.43e-15 77.0
MS.gene22798.t1 AT1G72770 30.279 251 112 9 91 320 238 446 4.11e-15 77.0
MS.gene22798.t1 AT1G72770 30.279 251 112 9 91 320 238 446 4.11e-15 77.0
MS.gene22798.t1 AT1G72770 30.279 251 112 9 91 320 238 446 4.11e-15 77.0
MS.gene22798.t1 AT3G51370 26.214 309 156 13 91 361 79 353 4.23e-15 76.6
MS.gene22798.t1 AT3G51370 26.214 309 156 13 91 361 79 353 4.23e-15 76.6
MS.gene22798.t1 AT2G33700 27.869 305 141 12 39 320 58 306 7.41e-15 75.9
MS.gene22798.t1 AT1G18030 27.046 281 148 11 94 361 112 348 3.76e-14 73.6
MS.gene22798.t1 AT2G40860 28.440 218 128 8 158 369 363 558 4.43e-14 73.9
MS.gene22798.t1 AT2G40860 28.440 218 128 8 158 369 461 656 6.40e-14 73.6
MS.gene22798.t1 AT1G17550 27.572 243 128 6 91 319 237 445 8.00e-14 73.2
MS.gene22798.t1 AT1G17550 27.572 243 128 6 91 319 237 445 8.00e-14 73.2
MS.gene22798.t1 AT2G34740 33.113 151 83 8 182 330 191 325 2.81e-13 70.5
MS.gene22798.t1 AT2G34740 33.113 151 83 8 182 330 173 307 2.86e-13 70.5
MS.gene22798.t1 AT4G31860 27.132 258 139 9 91 321 52 287 5.65e-13 69.7
MS.gene22798.t1 AT4G28400 29.730 222 100 11 94 311 70 239 5.88e-13 68.6
MS.gene22798.t1 AT4G31860 27.132 258 139 9 91 321 52 287 6.23e-13 69.3
MS.gene22798.t1 AT1G18030 27.753 227 117 8 94 311 112 300 6.75e-13 69.3
MS.gene22798.t1 AT2G40860 28.962 183 109 6 158 334 461 628 8.56e-13 70.1
MS.gene22798.t1 AT5G66080 29.412 204 96 9 196 361 59 252 1.08e-12 68.2
MS.gene22798.t1 AT2G25070 26.848 257 141 9 91 321 52 287 1.13e-12 68.9
MS.gene22798.t1 AT2G25070 26.848 257 141 9 91 321 52 287 1.13e-12 68.9
MS.gene22798.t1 AT5G02760 31.646 158 71 6 196 328 153 298 1.14e-12 68.9
MS.gene22798.t1 AT5G66080 29.412 204 96 9 196 361 163 356 1.53e-12 68.9
MS.gene22798.t1 AT3G12620 30.882 204 93 9 196 361 164 357 3.65e-12 67.8
MS.gene22798.t1 AT3G12620 30.882 204 93 9 196 361 164 357 3.65e-12 67.8
MS.gene22798.t1 AT4G38520 31.250 176 85 8 196 346 162 326 3.97e-12 67.4
MS.gene22798.t1 AT4G38520 31.250 176 85 8 196 346 162 326 3.97e-12 67.4
MS.gene22798.t1 AT5G06750 28.729 181 109 6 195 357 80 258 9.88e-11 62.8

Find 77 sgRNAs with CRISPR-Local

Find 150 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGATTAAATTATAGGAATT+TGG 0.150752 7.3:+4162979 MS.gene22798:intron
GATTATTGTATTAAAGATTA+TGG 0.199525 7.3:+4164100 MS.gene22798:CDS
GGTTCCTTTCTGACCTCTTT+TGG 0.202885 7.3:-4162631 None:intergenic
CTTGCCATGTCAAGGGCTTT+TGG 0.208056 7.3:+4164076 MS.gene22798:CDS
CATTGACTCTCTTACTCTTT+TGG 0.217341 7.3:-4163067 None:intergenic
AAGTACTAACGAGGTAAATT+TGG 0.252923 7.3:-4163878 None:intergenic
AACAACAAAGATTCAATATA+TGG 0.311956 7.3:+4163196 MS.gene22798:CDS
ATCCTCTATGTTCAATGGTT+TGG 0.312680 7.3:+4162449 MS.gene22798:CDS
GTCTATTTAACAGTTTCAAT+TGG 0.327269 7.3:-4164879 None:intergenic
AATGTCTACTGCTTCTTGAT+TGG 0.329653 7.3:-4164703 None:intergenic
TCTGGCACTATTAATGTTGA+TGG 0.338334 7.3:+4162582 MS.gene22798:CDS
GCTATCTTGCTCAGGGGAAA+TGG 0.343840 7.3:-4164856 None:intergenic
CATTTATCCTCTATGTTCAA+TGG 0.363846 7.3:+4162444 MS.gene22798:CDS
ATATTCTGCGGTATATTTGA+TGG 0.364778 7.3:+4163018 MS.gene22798:CDS
ATATTCCTCTGAGTTACTTC+AGG 0.378333 7.3:-4164136 None:intergenic
ATCAGACGATGATGGAAGTT+TGG 0.389577 7.3:+4163826 MS.gene22798:CDS
CAAGGTCTTTGCTATGCAAT+TGG 0.407044 7.3:+4163091 MS.gene22798:CDS
TTTGTTGTGCTTGCCACTGA+TGG 0.408199 7.3:+4164175 MS.gene22798:CDS
CACCATGCAACAGTCTTGAT+TGG 0.411872 7.3:-4162652 None:intergenic
TCAATTGGGCTATCTTGCTC+AGG 0.413365 7.3:-4164864 None:intergenic
TATTTGATGGACACGGGCCA+TGG 0.420048 7.3:+4163031 MS.gene22798:CDS
CTATCTTGCTCAGGGGAAAT+GGG 0.431506 7.3:-4164855 None:intergenic
TCTATTTAACAGTTTCAATT+GGG 0.444557 7.3:-4164878 None:intergenic
GCCCTTGACATGGCAAGTCC+TGG 0.445151 7.3:-4164070 None:intergenic
AGCAAAATCAGCTAAACGTT+TGG 0.451570 7.3:+4164746 MS.gene22798:CDS
ATGCTCAAGTTCTTGATCAA+TGG 0.462238 7.3:-4163247 None:intergenic
TGGTGACTCTCGTGCAGTAC+TGG 0.463725 7.3:+4163796 MS.gene22798:CDS
TTGTTGTGCTTGCCACTGAT+GGG 0.475803 7.3:+4164176 MS.gene22798:CDS
TGCCCTCTCAATTGTTAGAC+AGG 0.479242 7.3:+4163305 MS.gene22798:CDS
CAGTGGCAAGCACAACAAAC+TGG 0.480296 7.3:-4164171 None:intergenic
AACCAGGAGTGCATAGGGTC+TGG 0.482895 7.3:+4164029 MS.gene22798:CDS
AACCAGACCCTATGCACTCC+TGG 0.483257 7.3:-4164031 None:intergenic
CGCAGAATATCATGTCCTCT+TGG 0.484795 7.3:-4163005 None:intergenic
ATTTGATGGACACGGGCCAT+GGG 0.489246 7.3:+4163032 MS.gene22798:CDS
AATAGCAGAAATATCATCAA+TGG 0.495485 7.3:-4164814 None:intergenic
CTCCAGGACTTGCCATGTCA+AGG 0.496930 7.3:+4164068 MS.gene22798:CDS
TTCTCCAAAAGAGGTCAGAA+AGG 0.500364 7.3:+4162627 MS.gene22798:CDS
AGTCCTGGAGACTCTACATC+TGG 0.508363 7.3:-4164055 None:intergenic
TGATGAACCAGGAGTGCATA+GGG 0.509549 7.3:+4164024 MS.gene22798:CDS
TTACCAGATGTAGAGTCTCC+AGG 0.526827 7.3:+4164052 MS.gene22798:CDS
TGCATGGAAACGCAAGAGAA+GGG 0.527483 7.3:+4164785 MS.gene22798:CDS
GAGAGAATAATTCAGTGTCA+AGG 0.530299 7.3:+4163983 MS.gene22798:CDS
ATCAAGACTGTTGCATGGTG+TGG 0.533904 7.3:+4162655 MS.gene22798:CDS
CAATTGGGCTATCTTGCTCA+GGG 0.538157 7.3:-4164863 None:intergenic
ATCACTTGACGATCATGTAA+AGG 0.552534 7.3:+4163140 MS.gene22798:CDS
GAGAGAAGCTGTTGAAGCAA+TGG 0.555010 7.3:+4162521 MS.gene22798:CDS
TGCGGTATATTTGATGGACA+CGG 0.560385 7.3:+4163024 MS.gene22798:CDS
TCCAGGACTTGCCATGTCAA+GGG 0.561968 7.3:+4164069 MS.gene22798:CDS
GCTACAACATCAGACGATGA+TGG 0.562423 7.3:+4163818 MS.gene22798:CDS
ATGCATGGAAACGCAAGAGA+AGG 0.563663 7.3:+4164784 MS.gene22798:CDS
TACCTGTCTAACAATTGAGA+GGG 0.565339 7.3:-4163307 None:intergenic
AAAATCAGCTAAACGTTTGG+TGG 0.569397 7.3:+4164749 MS.gene22798:CDS
TGCCAAACCATTGAACATAG+AGG 0.573400 7.3:-4162451 None:intergenic
CAATTGCATAGCAAAGACCT+TGG 0.578108 7.3:-4163090 None:intergenic
GAAATTCTGTGAGATGTGAA+AGG 0.584077 7.3:+4162499 MS.gene22798:CDS
GCGGTATATTTGATGGACAC+GGG 0.590895 7.3:+4163025 MS.gene22798:CDS
CTTGCTCAGGGGAAATGGGA+GGG 0.592417 7.3:-4164851 None:intergenic
AGAGAATAATTCAGTGTCAA+GGG 0.594886 7.3:+4163984 MS.gene22798:CDS
TCTTGCTCAGGGGAAATGGG+AGG 0.601493 7.3:-4164852 None:intergenic
TGTTGTGCTTGCCACTGATG+GGG 0.603053 7.3:+4164177 MS.gene22798:CDS
TTACCTGTCTAACAATTGAG+AGG 0.603400 7.3:-4163308 None:intergenic
TTGGCTACAAAGTGACCCCA+TGG 0.606377 7.3:-4163048 None:intergenic
GAGTAAGAGAGTCAATGCCA+AGG 0.613440 7.3:+4163073 MS.gene22798:CDS
ATGATGAACCAGGAGTGCAT+AGG 0.615902 7.3:+4164023 MS.gene22798:CDS
ATCTCCAAAAGCCCTTGACA+TGG 0.615912 7.3:-4164080 None:intergenic
TCAAGACTGTTGCATGGTGT+GGG 0.621717 7.3:+4162656 MS.gene22798:CDS
TGGAATGTGCAGTACATGCA+TGG 0.626814 7.3:+4164769 MS.gene22798:CDS
AACCAATCAAGACTGTTGCA+TGG 0.651730 7.3:+4162650 MS.gene22798:CDS
GCATGGAAACGCAAGAGAAG+GGG 0.652422 7.3:+4164786 MS.gene22798:CDS
TTCTGTTTAAATGATGAACC+AGG 0.665974 7.3:+4164013 MS.gene22798:CDS
CAAGATACTTACCCCATCAG+TGG 0.666268 7.3:-4164188 None:intergenic
CAAGAGGACATGATATTCTG+CGG 0.676913 7.3:+4163006 MS.gene22798:CDS
ATAGGAATTTGGATGCCAAG+AGG 0.678718 7.3:+4162990 MS.gene22798:intron
TTTGATGGACACGGGCCATG+GGG 0.686895 7.3:+4163033 MS.gene22798:CDS
AGACTGTTGCATGGTGTGGG+AGG 0.695512 7.3:+4162659 MS.gene22798:CDS
AATTGGGCTATCTTGCTCAG+GGG 0.712499 7.3:-4164862 None:intergenic
CAGTACCTGAAGTAACTCAG+AGG 0.714319 7.3:+4164131 MS.gene22798:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTGAGATTAAATATGT+TGG + chr7.3:4164371-4164390 MS.gene22798:intron 15.0%
!! ACAAATAAATAAATAATCAC+CGG + chr7.3:4164531-4164550 MS.gene22798:intron 15.0%
!! ATATCAAAGACAAATAAAAT+GGG - chr7.3:4162907-4162926 None:intergenic 15.0%
!! GATTATTGTATTAAAGATTA+TGG + chr7.3:4164100-4164119 MS.gene22798:CDS 15.0%
!! TATATCAAAGACAAATAAAA+TGG - chr7.3:4162908-4162927 None:intergenic 15.0%
!! TTTGATATAAAATTCAATTC+TGG + chr7.3:4162919-4162938 MS.gene22798:intron 15.0%
!!! AGTTAATTATGTTTTTAGTT+TGG - chr7.3:4164605-4164624 None:intergenic 15.0%
!!! TTATCTATTTATTTGTTATC+TGG - chr7.3:4164471-4164490 None:intergenic 15.0%
!! AACAACAAAGATTCAATATA+TGG + chr7.3:4163196-4163215 MS.gene22798:CDS 20.0%
!! ACGATTAAATTATAGGAATT+TGG + chr7.3:4162979-4162998 MS.gene22798:intron 20.0%
!! TAATTTAATCGTCAATAGAT+AGG - chr7.3:4162971-4162990 None:intergenic 20.0%
!! TCTATTGACGATTAAATTAT+AGG + chr7.3:4162972-4162991 MS.gene22798:intron 20.0%
!! TTAAATTTATTGCTGAAATG+TGG + chr7.3:4164626-4164645 MS.gene22798:intron 20.0%
!!! AATCATAGTAACTAGTTTAT+AGG - chr7.3:4164215-4164234 None:intergenic 20.0%
!!! TGGGTTGATTATAAATATAT+AGG - chr7.3:4162888-4162907 None:intergenic 20.0%
!!! TTATTTTATAATGGTTTGCA+GGG + chr7.3:4163749-4163768 MS.gene22798:intron 20.0%
!!! TTTATTTTATAATGGTTTGC+AGG + chr7.3:4163748-4163767 MS.gene22798:intron 20.0%
! AATAGCAGAAATATCATCAA+TGG - chr7.3:4164817-4164836 None:intergenic 25.0%
! ATTTGTTCATGTTACAAGTT+TGG - chr7.3:4163595-4163614 None:intergenic 25.0%
! GATATAAAATTCAATTCTGG+TGG + chr7.3:4162922-4162941 MS.gene22798:intron 25.0%
! TCTGCTAACTAGTATATATA+CGG - chr7.3:4163390-4163409 None:intergenic 25.0%
! TGAGACATTTAGATTATGAT+TGG + chr7.3:4164429-4164448 MS.gene22798:intron 25.0%
!! AGATCATTTTCACTAAAGAA+AGG + chr7.3:4162474-4162493 MS.gene22798:CDS 25.0%
!! GAGTTTATTGTTGTCAATTT+TGG - chr7.3:4164335-4164354 None:intergenic 25.0%
!! TTTTAATGAATTTCTCCCTA+CGG - chr7.3:4163359-4163378 None:intergenic 25.0%
!!! AATAAATAGAAGTACTAACG+AGG - chr7.3:4163890-4163909 None:intergenic 25.0%
!!! TATTTTATAATGGTTTGCAG+GGG + chr7.3:4163750-4163769 MS.gene22798:intron 25.0%
AACAATATAGTTGCGATGTT+AGG + chr7.3:4163419-4163438 MS.gene22798:intron 30.0%
AACTTCACTGATATATTGGT+TGG - chr7.3:4163701-4163720 None:intergenic 30.0%
AAGTACTAACGAGGTAAATT+TGG - chr7.3:4163881-4163900 None:intergenic 30.0%
ACAATATAGTTGCGATGTTA+GGG + chr7.3:4163420-4163439 MS.gene22798:intron 30.0%
AGAGAATAATTCAGTGTCAA+GGG + chr7.3:4163984-4164003 MS.gene22798:CDS 30.0%
ATATTCTGCGGTATATTTGA+TGG + chr7.3:4163018-4163037 MS.gene22798:CDS 30.0%
CAAGAACTTCACTGATATAT+TGG - chr7.3:4163705-4163724 None:intergenic 30.0%
CATTTATCCTCTATGTTCAA+TGG + chr7.3:4162444-4162463 MS.gene22798:CDS 30.0%
GTAATCCAATTCCATCAAAT+AGG - chr7.3:4163492-4163511 None:intergenic 30.0%
GTTACAAGTTTGGTAAATGT+AGG - chr7.3:4163585-4163604 None:intergenic 30.0%
TAATTGCATAATTGCAGAAG+AGG + chr7.3:4163958-4163977 MS.gene22798:intron 30.0%
TACATGTTTGTATACACGTT+GGG - chr7.3:4162848-4162867 None:intergenic 30.0%
TTCTGTTTAAATGATGAACC+AGG + chr7.3:4164013-4164032 MS.gene22798:CDS 30.0%
TTGAAGGTTAAACAAACTCA+CGG - chr7.3:4162784-4162803 None:intergenic 30.0%
! ACATGAACAAATTGATGACA+TGG + chr7.3:4163603-4163622 MS.gene22798:intron 30.0%
! ACATGTACTCGTTACATTTT+TGG + chr7.3:4162861-4162880 MS.gene22798:intron 30.0%
!! ATGTCTTTGAAATAAGTGCT+GGG + chr7.3:4163449-4163468 MS.gene22798:intron 30.0%
!! ATTTTATAATGGTTTGCAGG+GGG + chr7.3:4163751-4163770 MS.gene22798:intron 30.0%
!! TATGTCTTTGAAATAAGTGC+TGG + chr7.3:4163448-4163467 MS.gene22798:intron 30.0%
AAAATCAGCTAAACGTTTGG+TGG + chr7.3:4164749-4164768 MS.gene22798:CDS 35.0%
AACAATAAACTCTCACACAC+AGG + chr7.3:4164343-4164362 MS.gene22798:intron 35.0%
AATGTCTACTGCTTCTTGAT+TGG - chr7.3:4164706-4164725 None:intergenic 35.0%
AGCAAAATCAGCTAAACGTT+TGG + chr7.3:4164746-4164765 MS.gene22798:CDS 35.0%
ATATTCCTCTGAGTTACTTC+AGG - chr7.3:4164139-4164158 None:intergenic 35.0%
ATCACTTGACGATCATGTAA+AGG + chr7.3:4163140-4163159 MS.gene22798:CDS 35.0%
ATCCTCTATGTTCAATGGTT+TGG + chr7.3:4162449-4162468 MS.gene22798:CDS 35.0%
ATCTTGATCAAATACCGATC+TGG - chr7.3:4163632-4163651 None:intergenic 35.0%
ATGCTCAAGTTCTTGATCAA+TGG - chr7.3:4163250-4163269 None:intergenic 35.0%
ATTACAATTTGGCAGTTGAC+TGG + chr7.3:4164558-4164577 MS.gene22798:intron 35.0%
CTCTTGTAGAAATGAAACTC+TGG + chr7.3:4164305-4164324 MS.gene22798:intron 35.0%
CTGCCAAATTGTAATATGAC+CGG - chr7.3:4164553-4164572 None:intergenic 35.0%
GAAATTCTGTGAGATGTGAA+AGG + chr7.3:4162499-4162518 MS.gene22798:CDS 35.0%
GAGAGAATAATTCAGTGTCA+AGG + chr7.3:4163983-4164002 MS.gene22798:CDS 35.0%
GGAGTTACATTAAGTACTTG+TGG + chr7.3:4164647-4164666 MS.gene22798:intron 35.0%
GTACATGTTTGTATACACGT+TGG - chr7.3:4162849-4162868 None:intergenic 35.0%
GTTAATCATCTGCATCATTC+TGG + chr7.3:4162944-4162963 MS.gene22798:intron 35.0%
TACCTGTCTAACAATTGAGA+GGG - chr7.3:4163310-4163329 None:intergenic 35.0%
TCACCGGTCATATTACAATT+TGG + chr7.3:4164547-4164566 MS.gene22798:intron 35.0%
TCTGGCACTATTAATGTTGA+TGG + chr7.3:4162582-4162601 MS.gene22798:CDS 35.0%
TCTGTCCTATTTGATGGAAT+TGG + chr7.3:4163484-4163503 MS.gene22798:intron 35.0%
TGACAAAAGCTACACTTTGA+AGG - chr7.3:4162800-4162819 None:intergenic 35.0%
TTACCTGTCTAACAATTGAG+AGG - chr7.3:4163311-4163330 None:intergenic 35.0%
! ACGGTTTTCATAGCAAATGT+TGG + chr7.3:4163776-4163795 MS.gene22798:CDS 35.0%
! TAAGAGCTTGTTTCGAATTC+CGG + chr7.3:4162733-4162752 MS.gene22798:intron 35.0%
!! AAGTTTGACTCGTTTTACAG+TGG + chr7.3:4163276-4163295 MS.gene22798:CDS 35.0%
!! AATAAGTGCTGGGATAACAA+TGG + chr7.3:4163459-4163478 MS.gene22798:intron 35.0%
!! TTAGCTGATTTTGCTTTGTC+TGG - chr7.3:4164741-4164760 None:intergenic 35.0%
!! TTGTTTTGTGATGCAGGTTT+GGG + chr7.3:4164671-4164690 MS.gene22798:intron 35.0%
!! TTTAGTTTGGTTCAACCAGT+TGG - chr7.3:4164592-4164611 None:intergenic 35.0%
!!! CATTGACTCTCTTACTCTTT+TGG - chr7.3:4163070-4163089 None:intergenic 35.0%
!!! TTTGTTTTGTGATGCAGGTT+TGG + chr7.3:4164670-4164689 MS.gene22798:intron 35.0%
AACAACTTTCGAGAATCCGT+AGG + chr7.3:4163340-4163359 MS.gene22798:intron 40.0%
AACCAATCAAGACTGTTGCA+TGG + chr7.3:4162650-4162669 MS.gene22798:CDS 40.0%
ACAACTTTCGAGAATCCGTA+GGG + chr7.3:4163341-4163360 MS.gene22798:intron 40.0%
ATAGGAATTTGGATGCCAAG+AGG + chr7.3:4162990-4163009 MS.gene22798:intron 40.0%
ATGGCATCTGTCCTATTTGA+TGG + chr7.3:4163478-4163497 MS.gene22798:intron 40.0%
CAAGAGGACATGATATTCTG+CGG + chr7.3:4163006-4163025 MS.gene22798:CDS 40.0%
CAATTGCATAGCAAAGACCT+TGG - chr7.3:4163093-4163112 None:intergenic 40.0%
CGTTGGGTTTGACAAAATCA+CGG - chr7.3:4162832-4162851 None:intergenic 40.0%
TGATGACATGGAATCCAGAT+CGG + chr7.3:4163615-4163634 MS.gene22798:intron 40.0%
TGCCAAACCATTGAACATAG+AGG - chr7.3:4162454-4162473 None:intergenic 40.0%
TTCTCCAAAAGAGGTCAGAA+AGG + chr7.3:4162627-4162646 MS.gene22798:CDS 40.0%
TTGGTTCAACCAGTTGGATT+AGG - chr7.3:4164586-4164605 None:intergenic 40.0%
! AAGAGCTTGTTTCGAATTCC+GGG + chr7.3:4162734-4162753 MS.gene22798:intron 40.0%
! CAAGGTCTTTGCTATGCAAT+TGG + chr7.3:4163091-4163110 MS.gene22798:CDS 40.0%
! CTTGATTTTGTCAAAACCCC+CGG - chr7.3:4162755-4162774 None:intergenic 40.0%
! GACTTGATTTTGTGTAGCTC+TGG + chr7.3:4162564-4162583 MS.gene22798:CDS 40.0%
! TGCGGTATATTTGATGGACA+CGG + chr7.3:4163024-4163043 MS.gene22798:CDS 40.0%
!! ACCTCTTTTGGAGAAAACTG+AGG - chr7.3:4162622-4162641 None:intergenic 40.0%
!! ATCAGACGATGATGGAAGTT+TGG + chr7.3:4163826-4163845 MS.gene22798:CDS 40.0%
!!! TGTGGTTTGTTTTGTGATGC+AGG + chr7.3:4164665-4164684 MS.gene22798:intron 40.0%
AATTGGGCTATCTTGCTCAG+GGG - chr7.3:4164865-4164884 None:intergenic 45.0%
ATCAAGACTGTTGCATGGTG+TGG + chr7.3:4162655-4162674 MS.gene22798:CDS 45.0%
ATCTCCAAAAGCCCTTGACA+TGG - chr7.3:4164083-4164102 None:intergenic 45.0%
ATGCATGGAAACGCAAGAGA+AGG + chr7.3:4164784-4164803 MS.gene22798:CDS 45.0%
CAAGATACTTACCCCATCAG+TGG - chr7.3:4164191-4164210 None:intergenic 45.0%
CAATTGGGCTATCTTGCTCA+GGG - chr7.3:4164866-4164885 None:intergenic 45.0%
CACCATGCAACAGTCTTGAT+TGG - chr7.3:4162655-4162674 None:intergenic 45.0%
CAGTACCTGAAGTAACTCAG+AGG + chr7.3:4164131-4164150 MS.gene22798:CDS 45.0%
CGCAGAATATCATGTCCTCT+TGG - chr7.3:4163008-4163027 None:intergenic 45.0%
CTATCTTGCTCAGGGGAAAT+GGG - chr7.3:4164858-4164877 None:intergenic 45.0%
GAGAGAAGCTGTTGAAGCAA+TGG + chr7.3:4162521-4162540 MS.gene22798:CDS 45.0%
GAGTAAGAGAGTCAATGCCA+AGG + chr7.3:4163073-4163092 MS.gene22798:CDS 45.0%
GCTACAACATCAGACGATGA+TGG + chr7.3:4163818-4163837 MS.gene22798:CDS 45.0%
TCAAGACTGTTGCATGGTGT+GGG + chr7.3:4162656-4162675 MS.gene22798:CDS 45.0%
TCAATTGGGCTATCTTGCTC+AGG - chr7.3:4164867-4164886 None:intergenic 45.0%
TGCATGGAAACGCAAGAGAA+GGG + chr7.3:4164785-4164804 MS.gene22798:CDS 45.0%
TGCCCTCTCAATTGTTAGAC+AGG + chr7.3:4163305-4163324 MS.gene22798:CDS 45.0%
TGGAATGTGCAGTACATGCA+TGG + chr7.3:4164769-4164788 MS.gene22798:CDS 45.0%
TTACCAGATGTAGAGTCTCC+AGG + chr7.3:4164052-4164071 MS.gene22798:CDS 45.0%
TTGTTGTGCTTGCCACTGAT+GGG + chr7.3:4164176-4164195 MS.gene22798:CDS 45.0%
! AGAGCTTGTTTCGAATTCCG+GGG + chr7.3:4162735-4162754 MS.gene22798:intron 45.0%
! ATGATGAACCAGGAGTGCAT+AGG + chr7.3:4164023-4164042 MS.gene22798:CDS 45.0%
! GCCTCAGTTTTCTCCAAAAG+AGG + chr7.3:4162618-4162637 MS.gene22798:CDS 45.0%
! GCGGTATATTTGATGGACAC+GGG + chr7.3:4163025-4163044 MS.gene22798:CDS 45.0%
! GGTTCCTTTCTGACCTCTTT+TGG - chr7.3:4162634-4162653 None:intergenic 45.0%
! TAATGGTTTGCAGGGGGAAA+CGG + chr7.3:4163757-4163776 MS.gene22798:intron 45.0%
! TGACTGGTTCCTAATCCAAC+TGG + chr7.3:4164574-4164593 MS.gene22798:intron 45.0%
! TGATGAACCAGGAGTGCATA+GGG + chr7.3:4164024-4164043 MS.gene22798:CDS 45.0%
! TTTGTTGTGCTTGCCACTGA+TGG + chr7.3:4164175-4164194 MS.gene22798:CDS 45.0%
!! CGGGGGTTTTGACAAAATCA+AGG + chr7.3:4162753-4162772 MS.gene22798:intron 45.0%
!! TCATTTATAATTATATAAAT+TGG + chr7.3:4163920-4163939 MS.gene22798:intron 5.0%
!!! TTAGTTAATTTATTTTATAA+TGG + chr7.3:4163740-4163759 MS.gene22798:intron 5.0%
AGTCCTGGAGACTCTACATC+TGG - chr7.3:4164058-4164077 None:intergenic 50.0%
CAGTGGCAAGCACAACAAAC+TGG - chr7.3:4164174-4164193 None:intergenic 50.0%
GCATGGAAACGCAAGAGAAG+GGG + chr7.3:4164786-4164805 MS.gene22798:CDS 50.0%
GCTATCTTGCTCAGGGGAAA+TGG - chr7.3:4164859-4164878 None:intergenic 50.0%
TCCAGGACTTGCCATGTCAA+GGG + chr7.3:4164069-4164088 MS.gene22798:CDS 50.0%
TGTTGTGCTTGCCACTGATG+GGG + chr7.3:4164177-4164196 MS.gene22798:CDS 50.0%
TTGGCTACAAAGTGACCCCA+TGG - chr7.3:4163051-4163070 None:intergenic 50.0%
! ATTTGATGGACACGGGCCAT+GGG + chr7.3:4163032-4163051 MS.gene22798:CDS 50.0%
! CTTGCCATGTCAAGGGCTTT+TGG + chr7.3:4164076-4164095 MS.gene22798:CDS 50.0%
! GAGCTTGTTTCGAATTCCGG+GGG + chr7.3:4162736-4162755 MS.gene22798:intron 50.0%
! TATTTGATGGACACGGGCCA+TGG + chr7.3:4163031-4163050 MS.gene22798:CDS 50.0%
AACCAGACCCTATGCACTCC+TGG - chr7.3:4164034-4164053 None:intergenic 55.0%
AGACTGTTGCATGGTGTGGG+AGG + chr7.3:4162659-4162678 MS.gene22798:CDS 55.0%
CTCCAGGACTTGCCATGTCA+AGG + chr7.3:4164068-4164087 MS.gene22798:CDS 55.0%
CTTGCTCAGGGGAAATGGGA+GGG - chr7.3:4164854-4164873 None:intergenic 55.0%
TCTTGCTCAGGGGAAATGGG+AGG - chr7.3:4164855-4164874 None:intergenic 55.0%
TGGTGACTCTCGTGCAGTAC+TGG + chr7.3:4163796-4163815 MS.gene22798:CDS 55.0%
! AACCAGGAGTGCATAGGGTC+TGG + chr7.3:4164029-4164048 MS.gene22798:CDS 55.0%
! TTTGATGGACACGGGCCATG+GGG + chr7.3:4163033-4163052 MS.gene22798:CDS 55.0%
GCCCTTGACATGGCAAGTCC+TGG - chr7.3:4164073-4164092 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 4162438 4164899 4162438 ID=MS.gene22798
chr7.3 mRNA 4162438 4164899 4162438 ID=MS.gene22798.t1;Parent=MS.gene22798
chr7.3 exon 4162438 4162680 4162438 ID=MS.gene22798.t1.exon1;Parent=MS.gene22798.t1
chr7.3 CDS 4162438 4162680 4162438 ID=cds.MS.gene22798.t1;Parent=MS.gene22798.t1
chr7.3 exon 4162994 4163326 4162994 ID=MS.gene22798.t1.exon2;Parent=MS.gene22798.t1
chr7.3 CDS 4162994 4163326 4162994 ID=cds.MS.gene22798.t1;Parent=MS.gene22798.t1
chr7.3 exon 4163770 4163890 4163770 ID=MS.gene22798.t1.exon3;Parent=MS.gene22798.t1
chr7.3 CDS 4163770 4163890 4163770 ID=cds.MS.gene22798.t1;Parent=MS.gene22798.t1
chr7.3 exon 4163975 4164198 4163975 ID=MS.gene22798.t1.exon4;Parent=MS.gene22798.t1
chr7.3 CDS 4163975 4164198 4163975 ID=cds.MS.gene22798.t1;Parent=MS.gene22798.t1
chr7.3 exon 4164687 4164899 4164687 ID=MS.gene22798.t1.exon5;Parent=MS.gene22798.t1
chr7.3 CDS 4164687 4164899 4164687 ID=cds.MS.gene22798.t1;Parent=MS.gene22798.t1
Gene Sequence

>MS.gene22798

ATGGGGCATTTATCCTCTATGTTCAATGGTTTGGCAAGATCATTTTCACTAAAGAAAGGAAGAAATTCTGTGAGATGTGAAAGGAGAGAAGCTGTTGAAGCAATGGCAAAAGAAGCTAAGAAAAATGACTTGATTTTGTGTAGCTCTGGCACTATTAATGTTGATGGTTCAAACAACTTTGCCTCAGTTTTCTCCAAAAGAGGTCAGAAAGGAACCAATCAAGACTGTTGCATGGTGTGGGAGGTATGCACAAAAATTAAATACTATAATCAAAAAGCTTTTTTTGTTATTGTTTTAAGAGCTTGTTTCGAATTCCGGGGGTTTTGACAAAATCAAGGTGACACCGTGAGTTTGTTTAACCTTCAAAGTGTAGCTTTTGTCAAAATCAAAACCGTGATTTTGTCAAACCCAACGTGTATACAAACATGTACTCGTTACATTTTTGGTCCTATATATTTATAATCAACCCATTTTATTTGTCTTTGATATAAAATTCAATTCTGGTGGTTAATCATCTGCATCATTCTGGTCCTATCTATTGACGATTAAATTATAGGAATTTGGATGCCAAGAGGACATGATATTCTGCGGTATATTTGATGGACACGGGCCATGGGGTCACTTTGTAGCCAAAAGAGTAAGAGAGTCAATGCCAAGGTCTTTGCTATGCAATTGGCAAGAGACACTTGCTACACAATCTTCATCACTTGACGATCATGTAAAGGATATTGATCATGTTAAGATAGCTGCAGACAACAAACAACAAAGATTCAATATATGGAAGCACTCTTTCTTGAAGACTTGTGCTTCCATTGATCAAGAACTTGAGCATTGTCGAAAGTTTGACTCGTTTTACAGTGGAACAACTGCCCTCTCAATTGTTAGACAGGTAAATACATAGAAACAACTTTCGAGAATCCGTAGGGAGAAATTCATTAAAAACAAAGTGCCGTATATATACTAGTTAGCAGATATTTAAATAACAATATAGTTGCGATGTTAGGGTTTTTTATGTCTTTGAAATAAGTGCTGGGATAACAATGGCATCTGTCCTATTTGATGGAATTGGATTACATGCAGTCACACATTTATGTTTTTAACAATCTCAATCATTGATTTTGTTCATACGACACATATGATAAGACCTACATTTACCAAACTTGTAACATGAACAAATTGATGACATGGAATCCAGATCGGTATTTGATCAAGATTTTCTATAATATGAAAATTCGCGACATGACAATGATTATAAATAGACCAACCAATATATCAGTGAAGTTCTTGCTTTGAAACTTTATCTTAGTTAATTTATTTTATAATGGTTTGCAGGGGGAAACGGTTTTCATAGCAAATGTTGGTGACTCTCGTGCAGTACTGGCTACAACATCAGACGATGATGGAAGTTTGGTAGCAGTACAACTAACAGTTGATTTCAAGCCAAATTTACCTCGTTAGTACTTCTATTTATTCATTCTTATTTCATTTATAATTATATAAATTGGCTTCTCACTATATTATAATTGCATAATTGCAGAAGAGGAAGAGAGAATAATTCAGTGTCAAGGGCGTGTGTTCTGTTTAAATGATGAACCAGGAGTGCATAGGGTCTGGTTACCAGATGTAGAGTCTCCAGGACTTGCCATGTCAAGGGCTTTTGGAGATTATTGTATTAAAGATTATGGTCTTATTTCAGTACCTGAAGTAACTCAGAGGAATATAAGTAGTAAAGACCAGTTTGTTGTGCTTGCCACTGATGGGGTAAGTATCTTGTCCTATAAACTAGTTACTATGATTGAATTTGATTACAACATCTTACTAGTTAAATTTTTTAGTCACAAAACAAATCTTACTAGTTACATTTAATCTCTTGTAGAAATGAAACTCTGGTATTCCAAAATTGACAACAATAAACTCTCACACACAGGAAGTTAAAATTGAGATTAAATATGTTGGTTTAGTTAAAAACAATGTTGCAAAAACTAAATTAGTGAGACATTTAGATTATGATTGGATTAGTTATGATTGAACCAGATAACAAATAAATAGATAAATCATAGAAATATCATTAAAAAAAGTAAAAGAATAAACAAACAAATAAATAAATAATCACCGGTCATATTACAATTTGGCAGTTGACTGGTTCCTAATCCAACTGGTTGAACCAAACTAAAAACATAATTAACTCTTAAATTTATTGCTGAAATGTGGAGTTACATTAAGTACTTGTGGTTTGTTTTGTGATGCAGGTTTGGGATGTGATCTCCAATCAAGAAGCAGTAGACATTGTATCTTCAACACCAGACAAAGCAAAATCAGCTAAACGTTTGGTGGAATGTGCAGTACATGCATGGAAACGCAAGAGAAGGGGTATTGCCATTGATGATATTTCTGCTATTTGTCTCATTTTGCACCCTCCCATTTCCCCTGAGCAAGATAGCCCAATTGAAACTGTTAAATAG
Protein sequence

>MS.gene22798.t1

MGHLSSMFNGLARSFSLKKGRNSVRCERREAVEAMAKEAKKNDLILCSSGTINVDGSNNFASVFSKRGQKGTNQDCCMVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPRSLLCNWQETLATQSSSLDDHVKDIDHVKIAADNKQQRFNIWKHSFLKTCASIDQELEHCRKFDSFYSGTTALSIVRQGETVFIANVGDSRAVLATTSDDDGSLVAVQLTVDFKPNLPQEEERIIQCQGRVFCLNDEPGVHRVWLPDVESPGLAMSRAFGDYCIKDYGLISVPEVTQRNISSKDQFVVLATDGVWDVISNQEAVDIVSSTPDKAKSAKRLVECAVHAWKRKRRGIAIDDISAICLILHPPISPEQDSPIETVK