Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23136.t1 | RHN76102.1 | 87.4 | 95 | 12 | 0 | 26 | 120 | 264 | 358 | 1.40E-36 | 163.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23136.t1 | Q9XE58 | 41.9 | 117 | 61 | 1 | 32 | 141 | 360 | 476 | 1.9e-18 | 94.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23136.t1 | G7IRV1 | 87.4 | 95 | 12 | 0 | 26 | 120 | 336 | 430 | 1.0e-36 | 163.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene23136.t1 | TF | GRAS |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050766 | MS.gene23136 | 0.998304 | 2.52E-261 | -1.69E-46 |
| MS.gene050769 | MS.gene23136 | 0.91656 | 1.54E-85 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23136.t1 | MTR_2g097410 | 87.368 | 95 | 12 | 0 | 26 | 120 | 336 | 430 | 5.83e-49 | 171 |
| MS.gene23136.t1 | MTR_4g064150 | 62.667 | 75 | 28 | 0 | 40 | 114 | 340 | 414 | 1.42e-27 | 110 |
| MS.gene23136.t1 | MTR_3g087300 | 92.727 | 55 | 4 | 0 | 26 | 80 | 154 | 208 | 1.52e-27 | 105 |
| MS.gene23136.t1 | MTR_4g064160 | 56.180 | 89 | 39 | 0 | 30 | 118 | 285 | 373 | 2.44e-25 | 104 |
| MS.gene23136.t1 | MTR_4g064120 | 49.505 | 101 | 48 | 2 | 21 | 119 | 215 | 314 | 2.15e-24 | 101 |
| MS.gene23136.t1 | MTR_7g062120 | 59.211 | 76 | 31 | 0 | 43 | 118 | 354 | 429 | 1.02e-23 | 99.8 |
| MS.gene23136.t1 | MTR_4g064180 | 60.000 | 70 | 28 | 0 | 42 | 111 | 235 | 304 | 2.04e-22 | 95.9 |
| MS.gene23136.t1 | MTR_2g097390 | 49.425 | 87 | 44 | 0 | 32 | 118 | 246 | 332 | 1.23e-20 | 90.9 |
| MS.gene23136.t1 | MTR_2g097350 | 52.778 | 72 | 34 | 0 | 47 | 118 | 260 | 331 | 1.05e-19 | 88.2 |
| MS.gene23136.t1 | MTR_2g097310 | 54.930 | 71 | 29 | 1 | 51 | 118 | 259 | 329 | 1.26e-18 | 85.1 |
| MS.gene23136.t1 | MTR_2g097463 | 56.522 | 69 | 28 | 1 | 41 | 107 | 268 | 336 | 2.63e-16 | 78.2 |
| MS.gene23136.t1 | MTR_4g064200 | 56.061 | 66 | 28 | 1 | 55 | 120 | 278 | 342 | 3.61e-15 | 74.7 |
| MS.gene23136.t1 | MTR_2g026080 | 89.189 | 37 | 4 | 0 | 199 | 235 | 212 | 248 | 4.03e-15 | 74.3 |
| MS.gene23136.t1 | MTR_2g097467 | 41.322 | 121 | 58 | 6 | 15 | 124 | 236 | 354 | 7.83e-15 | 73.9 |
| MS.gene23136.t1 | MTR_4g133620 | 82.051 | 39 | 7 | 0 | 199 | 237 | 209 | 247 | 1.34e-14 | 72.8 |
| MS.gene23136.t1 | MTR_2g097473 | 41.964 | 112 | 55 | 4 | 15 | 118 | 236 | 345 | 5.86e-14 | 71.2 |
| MS.gene23136.t1 | MTR_7g051910 | 69.444 | 36 | 11 | 0 | 200 | 235 | 207 | 242 | 4.21e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23136.t1 | AT1G07530 | 54.651 | 86 | 32 | 1 | 40 | 118 | 368 | 453 | 9.95e-23 | 97.1 |
| MS.gene23136.t1 | AT1G07520 | 49.474 | 95 | 36 | 3 | 24 | 113 | 119 | 206 | 2.34e-19 | 87.0 |
| MS.gene23136.t1 | AT1G07520 | 49.474 | 95 | 36 | 3 | 24 | 113 | 119 | 206 | 2.34e-19 | 87.0 |
| MS.gene23136.t1 | AT1G07520 | 49.474 | 95 | 36 | 3 | 24 | 113 | 283 | 370 | 2.86e-19 | 87.0 |
| MS.gene23136.t1 | AT1G07520 | 49.474 | 95 | 36 | 3 | 24 | 113 | 284 | 371 | 2.97e-19 | 87.0 |
| MS.gene23136.t1 | AT2G29060 | 51.282 | 78 | 38 | 0 | 41 | 118 | 264 | 341 | 5.20e-19 | 86.3 |
| MS.gene23136.t1 | AT2G29060 | 51.282 | 78 | 38 | 0 | 41 | 118 | 301 | 378 | 5.56e-19 | 86.3 |
| MS.gene23136.t1 | AT2G37650 | 55.714 | 70 | 31 | 0 | 49 | 118 | 335 | 404 | 3.63e-18 | 83.6 |
| MS.gene23136.t1 | AT2G37650 | 55.714 | 70 | 31 | 0 | 49 | 118 | 323 | 392 | 3.90e-18 | 83.6 |
| MS.gene23136.t1 | AT2G29065 | 57.627 | 59 | 25 | 0 | 55 | 113 | 246 | 304 | 1.17e-13 | 70.5 |
| MS.gene23136.t1 | AT3G46600 | 36.607 | 112 | 67 | 3 | 27 | 138 | 149 | 256 | 1.46e-13 | 70.1 |
| MS.gene23136.t1 | AT3G46600 | 38.144 | 97 | 59 | 1 | 42 | 138 | 193 | 288 | 2.52e-13 | 69.3 |
| MS.gene23136.t1 | AT5G59450 | 45.333 | 75 | 38 | 1 | 41 | 112 | 204 | 278 | 4.98e-13 | 68.6 |
| MS.gene23136.t1 | AT5G47530 | 57.895 | 57 | 21 | 1 | 182 | 235 | 190 | 246 | 4.91e-12 | 65.5 |
| MS.gene23136.t1 | AT3G25290 | 72.222 | 36 | 10 | 0 | 200 | 235 | 220 | 255 | 8.44e-12 | 64.7 |
| MS.gene23136.t1 | AT3G25290 | 72.222 | 36 | 10 | 0 | 200 | 235 | 220 | 255 | 8.44e-12 | 64.7 |
| MS.gene23136.t1 | AT4G17280 | 72.222 | 36 | 10 | 0 | 200 | 235 | 219 | 254 | 1.51e-11 | 63.9 |
| MS.gene23136.t1 | AT4G12980 | 69.444 | 36 | 11 | 0 | 200 | 235 | 221 | 256 | 1.86e-11 | 63.5 |
| MS.gene23136.t1 | AT5G35735 | 75.676 | 37 | 7 | 1 | 199 | 235 | 210 | 244 | 2.68e-11 | 63.2 |
| MS.gene23136.t1 | AT3G46600 | 39.506 | 81 | 48 | 1 | 58 | 138 | 1 | 80 | 5.49e-11 | 62.0 |
Find 0 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTATACAAAAAAAAAATGAA+TGG | - | 51770:7747-7766 | MS.gene23136:intron | 15.0% |
| !! | TGAACATAAATAATTATAAC+TGG | + | 51770:8257-8276 | None:intergenic | 15.0% |
| !! | ATCAAGTTTGTAAACTATAA+TGG | - | 51770:6857-6876 | MS.gene23136:intron | 20.0% |
| !! | ATCCTTAATCAATATCAAAA+GGG | + | 51770:8521-8540 | None:intergenic | 20.0% |
| !!! | AACATTTTTAGCAAATTTTC+AGG | + | 51770:7002-7021 | None:intergenic | 20.0% |
| !!! | TAAAAATGTTCTTTGAGTTT+TGG | + | 51770:6695-6714 | None:intergenic | 20.0% |
| !!! | TAATGTTAAAACTTTTTAGC+AGG | + | 51770:6742-6761 | None:intergenic | 20.0% |
| !!! | TACTATGTTTTCCTTAATTT+TGG | - | 51770:8132-8151 | MS.gene23136:intron | 20.0% |
| !!! | TTGTATAGAATATTTTGTGT+TGG | - | 51770:7988-8007 | MS.gene23136:CDS | 20.0% |
| ! | CATCCTTAATCAATATCAAA+AGG | + | 51770:8522-8541 | None:intergenic | 25.0% |
| ! | GCTAATAAAGTTATTGCATT+TGG | - | 51770:6554-6573 | MS.gene23136:CDS | 25.0% |
| ! | GTACAGAAATTTGAATTCAT+TGG | - | 51770:7058-7077 | MS.gene23136:CDS | 25.0% |
| ! | GTCTTATAAGCTAACTTTAT+TGG | - | 51770:7559-7578 | MS.gene23136:CDS | 25.0% |
| ! | TGCATTCAACTTAAGATATT+TGG | - | 51770:7943-7962 | MS.gene23136:CDS | 25.0% |
| ! | TTTATGCATGTCAATATGAA+TGG | - | 51770:8373-8392 | MS.gene23136:intron | 25.0% |
| !! | AATTTGGATGCTTTATTAAC+AGG | - | 51770:8031-8050 | MS.gene23136:CDS | 25.0% |
| !! | ACATCAGTTTTTAACAACTT+AGG | + | 51770:6792-6811 | None:intergenic | 25.0% |
| !! | GTTAATAAAGCATCCAAATT+TGG | + | 51770:8031-8050 | None:intergenic | 25.0% |
| !! | GTTAGTTTAGACCAAAATTA+AGG | + | 51770:8146-8165 | None:intergenic | 25.0% |
| !! | TTTTCTTTTTGTAAGTTGCA+TGG | + | 51770:7084-7103 | None:intergenic | 25.0% |
| !!! | ATAGTCTTGGTTAACTTTTT+TGG | - | 51770:6956-6975 | MS.gene23136:intron | 25.0% |
| !!! | CAACCATTTTTTTTATAAGC+AGG | + | 51770:7971-7990 | None:intergenic | 25.0% |
| !!! | TAATTTTGGTCTAAACTAAC+AGG | - | 51770:8146-8165 | MS.gene23136:intron | 25.0% |
| !!! | TACCCTTTTGATATTGATTA+AGG | - | 51770:8516-8535 | MS.gene23136:intron | 25.0% |
| !!! | TAGAATATTTTGTGTTGGTT+TGG | - | 51770:7993-8012 | MS.gene23136:CDS | 25.0% |
| !!! | TGCAGGAATTTTGATAATAT+TGG | - | 51770:7621-7640 | MS.gene23136:intron | 25.0% |
| !!! | TTAATTGTTTTTCAGACTCA+TGG | - | 51770:8542-8561 | MS.gene23136:intron | 25.0% |
| !!! | TTTGTGATTTTGATTGCAAA+AGG | - | 51770:7464-7483 | MS.gene23136:intron | 25.0% |
| AAGTCACAAGTAACAACAAT+AGG | - | 51770:8305-8324 | MS.gene23136:intron | 30.0% | |
| ACATAGTAAATAAGTCAGCA+AGG | + | 51770:8120-8139 | None:intergenic | 30.0% | |
| ACTTCTATCAAAATTAGCAG+TGG | - | 51770:7672-7691 | MS.gene23136:intron | 30.0% | |
| ATGAATTGTTGAAGCAGATT+AGG | - | 51770:7286-7305 | MS.gene23136:intron | 30.0% | |
| CAAGTAACAACAATAGGTTA+TGG | - | 51770:8311-8330 | MS.gene23136:intron | 30.0% | |
| GAGCCTGCTTATAAAAAAAA+TGG | - | 51770:7965-7984 | MS.gene23136:CDS | 30.0% | |
| GCTGATTAGAATACCAAATT+TGG | - | 51770:8015-8034 | MS.gene23136:CDS | 30.0% | |
| GGCTCATTGTTACAATATAT+TGG | - | 51770:7883-7902 | MS.gene23136:CDS | 30.0% | |
| TAGTAGTTAAAGAGAAGCTT+TGG | - | 51770:6637-6656 | MS.gene23136:CDS | 30.0% | |
| TCTGATGTTTAAGAATTTGC+TGG | - | 51770:6932-6951 | MS.gene23136:intron | 30.0% | |
| TGAACTTTAACAACCTCTTA+TGG | - | 51770:7862-7881 | MS.gene23136:CDS | 30.0% | |
| TTGCTGATCAATTGAATAAC+AGG | - | 51770:7782-7801 | MS.gene23136:intron | 30.0% | |
| ! | AATCAGCACTAAACATCTTT+TGG | + | 51770:7425-7444 | None:intergenic | 30.0% |
| ! | CTGATGTAATGATAGTTTGT+TGG | - | 51770:6805-6824 | MS.gene23136:intron | 30.0% |
| ! | GGAATAGAAGTTTTACATAG+AGG | - | 51770:7803-7822 | MS.gene23136:intron | 30.0% |
| ! | TGGTAGAGTCATGATTATTT+TGG | - | 51770:6825-6844 | MS.gene23136:intron | 30.0% |
| ACATAAGGTAAAACCAAGCA+AGG | + | 51770:8652-8671 | None:intergenic | 35.0% | |
| AGTAGCTAGAATGAAAGTTG+AGG | - | 51770:8082-8101 | MS.gene23136:CDS | 35.0% | |
| GTTATTGCATTTGGCTGTAT+TGG | - | 51770:6563-6582 | MS.gene23136:CDS | 35.0% | |
| TTGTAACAATGAGCCATAAG+AGG | + | 51770:7878-7897 | None:intergenic | 35.0% | |
| ! | TAGTTAAAGAGAAGCTTTGG+AGG | - | 51770:6640-6659 | MS.gene23136:CDS | 35.0% |
| ! | TTTGATAATATTGGCAGCGT+TGG | - | 51770:7630-7649 | MS.gene23136:intron | 35.0% |
| !! | AGAATTTGCTGGTATAGTCT+TGG | - | 51770:6943-6962 | MS.gene23136:intron | 35.0% |
| !! | GTAAACTATAATGGTGCCAT+TGG | - | 51770:6866-6885 | MS.gene23136:intron | 35.0% |
| !!! | AGTGCTGATTTTGATTGTGT+AGG | - | 51770:7435-7454 | MS.gene23136:intron | 35.0% |
| AAGGTATGTTAGCATGGGTT+CGG | - | 51770:7725-7744 | MS.gene23136:CDS | 40.0% | |
| ACCTTTCAGCATCATAGAGA+TGG | + | 51770:7529-7548 | None:intergenic | 40.0% | |
| ATGCAACCAAAGTGATCCAA+TGG | + | 51770:6885-6904 | None:intergenic | 40.0% | |
| CAATAGGTTATGGTCAACAG+TGG | - | 51770:8321-8340 | MS.gene23136:intron | 40.0% | |
| CTGTGTCTGCTAATGACAAT+AGG | - | 51770:7256-7275 | MS.gene23136:intron | 40.0% | |
| GCTGATTGGCAAGTAACATA+AGG | + | 51770:8667-8686 | None:intergenic | 40.0% | |
| TCAAATATGCAGACCTTGCT+TGG | - | 51770:8636-8655 | MS.gene23136:CDS | 40.0% | |
| TCAAGCCAATCAAACTACAG+TGG | - | 51770:8192-8211 | MS.gene23136:intron | 40.0% | |
| TCCATCTCTATGATGCTGAA+AGG | - | 51770:7525-7544 | MS.gene23136:CDS | 40.0% | |
| TGAACAAAAGGATGGATCAG+TGG | - | 51770:7119-7138 | MS.gene23136:intron | 40.0% | |
| TTGGATCACTTTGGTTGCAT+AGG | - | 51770:6885-6904 | MS.gene23136:intron | 40.0% | |
| TTGTGCACACAGAACCAAAA+GGG | + | 51770:7235-7254 | None:intergenic | 40.0% | |
| TTGTGTGCTGAACAAAAGGA+TGG | - | 51770:7111-7130 | MS.gene23136:intron | 40.0% | |
| ! | GCTGAAAGGTATGTTAGCAT+GGG | - | 51770:7720-7739 | MS.gene23136:CDS | 40.0% |
| ! | TCCTTTTGTTCAGCACACAA+CGG | + | 51770:7111-7130 | None:intergenic | 40.0% |
| ! | TGCTGAAAGGTATGTTAGCA+TGG | - | 51770:7719-7738 | MS.gene23136:CDS | 40.0% |
| ! | TGTGATTGCAAGGTACTTGA+AGG | - | 51770:8610-8629 | MS.gene23136:intron | 40.0% |
| AAATGCGATTGAAGCGCACA+TGG | - | 51770:7362-7381 | MS.gene23136:intron | 45.0% | |
| ACAAAAGGATGGATCAGTGG+TGG | - | 51770:7122-7141 | MS.gene23136:intron | 45.0% | |
| ACCTTTCAGCACTACAACTG+AGG | + | 51770:7710-7729 | None:intergenic | 45.0% | |
| AGAGGGATGTTGTGGATTTG+AGG | - | 51770:7208-7227 | MS.gene23136:intron | 45.0% | |
| AGCCAATCAAACTACAGTGG+TGG | - | 51770:8195-8214 | MS.gene23136:intron | 45.0% | |
| AGGTGATGCATCAGAGAGAA+TGG | - | 51770:7326-7345 | MS.gene23136:intron | 45.0% | |
| CACCACCACTGTAGTTTGAT+TGG | + | 51770:8200-8219 | None:intergenic | 45.0% | |
| CTTGTGCACACAGAACCAAA+AGG | + | 51770:7236-7255 | None:intergenic | 45.0% | |
| GAAGAAACAAGGGAGGAAGA+GGG | - | 51770:7191-7210 | MS.gene23136:intron | 45.0% | |
| GGGTACATTGCACAAAGACA+CGG | + | 51770:8501-8520 | None:intergenic | 45.0% | |
| GGTACATTGCACAAAGACAC+GGG | + | 51770:8500-8519 | None:intergenic | 45.0% | |
| GTATGAATGTACGACTGTGC+AGG | - | 51770:7604-7623 | MS.gene23136:CDS | 45.0% | |
| TAGGTTATGGTCAACAGTGG+AGG | - | 51770:8324-8343 | MS.gene23136:intron | 45.0% | |
| TATGGTCAACAGTGGAGGTA+GGG | - | 51770:8329-8348 | MS.gene23136:intron | 45.0% | |
| TGGAGGTAGGGCTAAAGATT+AGG | - | 51770:8341-8360 | MS.gene23136:intron | 45.0% | |
| TTATGGTCAACAGTGGAGGT+AGG | - | 51770:8328-8347 | MS.gene23136:intron | 45.0% | |
| ! | AGTTACTTTCTTGCCTCAGG+GGG | - | 51770:7488-7507 | MS.gene23136:intron | 45.0% |
| ! | CAGTTACTTTCTTGCCTCAG+GGG | - | 51770:7487-7506 | MS.gene23136:intron | 45.0% |
| ! | GATGTTTTTCCTCTTGCAGC+TGG | + | 51770:8174-8193 | None:intergenic | 45.0% |
| ! | GCAGTTACTTTCTTGCCTCA+GGG | - | 51770:7486-7505 | MS.gene23136:intron | 45.0% |
| ! | TCCTCAGTTGTAGTGCTGAA+AGG | - | 51770:7706-7725 | MS.gene23136:CDS | 45.0% |
| ! | TGTGGATTTGAGGACCCTTT+TGG | - | 51770:7218-7237 | MS.gene23136:intron | 45.0% |
| !! | ACACAGGTTGGTGAACTTGA+TGG | - | 51770:7153-7172 | MS.gene23136:intron | 45.0% |
| !! | AGGAAGCATTCTTGTCCTTC+AGG | - | 51770:7306-7325 | MS.gene23136:intron | 45.0% |
| !! | AGGTTGGTGAACTTGATGGA+GGG | - | 51770:7157-7176 | MS.gene23136:intron | 45.0% |
| !! | ATGGTGCCATTGGATCACTT+TGG | - | 51770:6876-6895 | MS.gene23136:intron | 45.0% |
| !! | TGGCAGCGTTGGTAATCATT+CGG | - | 51770:7641-7660 | MS.gene23136:intron | 45.0% |
| AAGGCGCGTTCGAAGAAACA+AGG | - | 51770:7180-7199 | MS.gene23136:intron | 50.0% | |
| AGGCGCGTTCGAAGAAACAA+GGG | - | 51770:7181-7200 | MS.gene23136:intron | 50.0% | |
| CGAAGAAACAAGGGAGGAAG+AGG | - | 51770:7190-7209 | MS.gene23136:intron | 50.0% | |
| CTCTCTGATGCATCACCTGA+AGG | + | 51770:7324-7343 | None:intergenic | 50.0% | |
| CTTGCAATCACAGCTCCCAA+AGG | + | 51770:8602-8621 | None:intergenic | 50.0% | |
| GCCGTTGTGTGCTGAACAAA+AGG | - | 51770:7107-7126 | MS.gene23136:intron | 50.0% | |
| GTGGAGAGTAGAACACAGGT+TGG | - | 51770:7141-7160 | MS.gene23136:intron | 50.0% | |
| TAACAGGAACCAGCTGCAAG+AGG | - | 51770:8162-8181 | MS.gene23136:intron | 50.0% | |
| TGGTGAACTTGATGGAGGGA+AGG | - | 51770:7161-7180 | MS.gene23136:intron | 50.0% | |
| ! | AGTGCTGAATGCAGTGAGCT+GGG | - | 51770:8565-8584 | MS.gene23136:intron | 50.0% |
| ! | AGTGGTGGAGAGTAGAACAC+AGG | - | 51770:7137-7156 | MS.gene23136:intron | 50.0% |
| ! | CTTTGGGAGCTGTGATTGCA+AGG | - | 51770:8600-8619 | MS.gene23136:intron | 50.0% |
| ! | GGCAGTTACTTTCTTGCCTC+AGG | - | 51770:7485-7504 | MS.gene23136:intron | 50.0% |
| !! | CACATGGTTGGTGCTGGTAA+CGG | - | 51770:7378-7397 | MS.gene23136:intron | 50.0% |
| !! | CAGGTTGGTGAACTTGATGG+AGG | - | 51770:7156-7175 | MS.gene23136:intron | 50.0% |
| AGGGAGGAAGAGGGATGTTG+TGG | - | 51770:7200-7219 | MS.gene23136:intron | 55.0% | |
| CATACAATCTCGTCCCCCTG+AGG | + | 51770:7504-7523 | None:intergenic | 55.0% | |
| CGCGTTCGAAGAAACAAGGG+AGG | - | 51770:7184-7203 | MS.gene23136:intron | 55.0% | |
| GCGATTGAAGCGCACATGGT+TGG | - | 51770:7366-7385 | MS.gene23136:intron | 55.0% | |
| GTGCTGAATGCAGTGAGCTG+GGG | - | 51770:8566-8585 | MS.gene23136:intron | 55.0% | |
| TGCTGAATGCAGTGAGCTGG+GGG | - | 51770:8567-8586 | MS.gene23136:intron | 55.0% | |
| TGGGGGACCTTGATGCCTTT+GGG | - | 51770:8584-8603 | MS.gene23136:intron | 55.0% | |
| !! | CACAGCTCCCAAAGGCATCA+AGG | + | 51770:8594-8613 | None:intergenic | 55.0% |
| !! | GAGTGCTGAATGCAGTGAGC+TGG | - | 51770:8564-8583 | MS.gene23136:intron | 55.0% |
| CTGGGGGACCTTGATGCCTT+TGG | - | 51770:8583-8602 | MS.gene23136:intron | 60.0% | |
| ! | GAAGCGCACATGGTTGGTGC+TGG | - | 51770:7372-7391 | MS.gene23136:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51770 | gene | 6552 | 8697 | 6552 | ID=MS.gene23136 |
| 51770 | mRNA | 6552 | 8697 | 6552 | ID=MS.gene23136.t1;Parent=MS.gene23136 |
| 51770 | exon | 8623 | 8697 | 8623 | ID=MS.gene23136.t1.exon1;Parent=MS.gene23136.t1 |
| 51770 | CDS | 8623 | 8697 | 8623 | ID=cds.MS.gene23136.t1;Parent=MS.gene23136.t1 |
| 51770 | exon | 7850 | 8120 | 7850 | ID=MS.gene23136.t1.exon2;Parent=MS.gene23136.t1 |
| 51770 | CDS | 7850 | 8120 | 7850 | ID=cds.MS.gene23136.t1;Parent=MS.gene23136.t1 |
| 51770 | exon | 7703 | 7763 | 7703 | ID=MS.gene23136.t1.exon3;Parent=MS.gene23136.t1 |
| 51770 | CDS | 7703 | 7763 | 7703 | ID=cds.MS.gene23136.t1;Parent=MS.gene23136.t1 |
| 51770 | exon | 7503 | 7623 | 7503 | ID=MS.gene23136.t1.exon4;Parent=MS.gene23136.t1 |
| 51770 | CDS | 7503 | 7623 | 7503 | ID=cds.MS.gene23136.t1;Parent=MS.gene23136.t1 |
| 51770 | exon | 7016 | 7081 | 7016 | ID=MS.gene23136.t1.exon5;Parent=MS.gene23136.t1 |
| 51770 | CDS | 7016 | 7081 | 7016 | ID=cds.MS.gene23136.t1;Parent=MS.gene23136.t1 |
| 51770 | exon | 6552 | 6692 | 6552 | ID=MS.gene23136.t1.exon6;Parent=MS.gene23136.t1 |
| 51770 | CDS | 6552 | 6692 | 6552 | ID=cds.MS.gene23136.t1;Parent=MS.gene23136.t1 |
| Gene Sequence |
| Protein sequence |
