Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050766.t1 | RHN76102.1 | 87.4 | 95 | 12 | 0 | 26 | 120 | 264 | 358 | 1.40E-36 | 163.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050766.t1 | Q9XE58 | 41.9 | 117 | 61 | 1 | 32 | 141 | 360 | 476 | 1.9e-18 | 94.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050766.t1 | G7IRV1 | 87.4 | 95 | 12 | 0 | 26 | 120 | 336 | 430 | 1.0e-36 | 163.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene050766.t1 | TF | GRAS |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050766 | MS.gene050769 | 0.915592 | 4.90E-85 | -1.69E-46 |
| MS.gene050766 | MS.gene23136 | 0.998304 | 2.52E-261 | -1.69E-46 |
| MS.gene050766 | MS.gene23140 | 0.981148 | 6.86E-152 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050766.t1 | MTR_2g097410 | 87.368 | 95 | 12 | 0 | 26 | 120 | 336 | 430 | 5.83e-49 | 171 |
| MS.gene050766.t1 | MTR_4g064150 | 62.667 | 75 | 28 | 0 | 40 | 114 | 340 | 414 | 1.42e-27 | 110 |
| MS.gene050766.t1 | MTR_3g087300 | 92.727 | 55 | 4 | 0 | 26 | 80 | 154 | 208 | 1.52e-27 | 105 |
| MS.gene050766.t1 | MTR_4g064160 | 56.180 | 89 | 39 | 0 | 30 | 118 | 285 | 373 | 2.44e-25 | 104 |
| MS.gene050766.t1 | MTR_4g064120 | 49.505 | 101 | 48 | 2 | 21 | 119 | 215 | 314 | 2.15e-24 | 101 |
| MS.gene050766.t1 | MTR_7g062120 | 59.211 | 76 | 31 | 0 | 43 | 118 | 354 | 429 | 1.02e-23 | 99.8 |
| MS.gene050766.t1 | MTR_4g064180 | 60.000 | 70 | 28 | 0 | 42 | 111 | 235 | 304 | 2.04e-22 | 95.9 |
| MS.gene050766.t1 | MTR_2g097390 | 49.425 | 87 | 44 | 0 | 32 | 118 | 246 | 332 | 1.23e-20 | 90.9 |
| MS.gene050766.t1 | MTR_2g097350 | 52.778 | 72 | 34 | 0 | 47 | 118 | 260 | 331 | 1.05e-19 | 88.2 |
| MS.gene050766.t1 | MTR_2g097310 | 54.930 | 71 | 29 | 1 | 51 | 118 | 259 | 329 | 1.26e-18 | 85.1 |
| MS.gene050766.t1 | MTR_2g097463 | 56.522 | 69 | 28 | 1 | 41 | 107 | 268 | 336 | 2.63e-16 | 78.2 |
| MS.gene050766.t1 | MTR_4g064200 | 56.061 | 66 | 28 | 1 | 55 | 120 | 278 | 342 | 3.61e-15 | 74.7 |
| MS.gene050766.t1 | MTR_2g026080 | 89.189 | 37 | 4 | 0 | 199 | 235 | 212 | 248 | 4.03e-15 | 74.3 |
| MS.gene050766.t1 | MTR_2g097467 | 41.322 | 121 | 58 | 6 | 15 | 124 | 236 | 354 | 7.83e-15 | 73.9 |
| MS.gene050766.t1 | MTR_4g133620 | 82.051 | 39 | 7 | 0 | 199 | 237 | 209 | 247 | 1.34e-14 | 72.8 |
| MS.gene050766.t1 | MTR_2g097473 | 41.964 | 112 | 55 | 4 | 15 | 118 | 236 | 345 | 5.86e-14 | 71.2 |
| MS.gene050766.t1 | MTR_7g051910 | 69.444 | 36 | 11 | 0 | 200 | 235 | 207 | 242 | 4.21e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050766.t1 | AT1G07530 | 54.651 | 86 | 32 | 1 | 40 | 118 | 368 | 453 | 9.95e-23 | 97.1 |
| MS.gene050766.t1 | AT1G07520 | 49.474 | 95 | 36 | 3 | 24 | 113 | 119 | 206 | 2.34e-19 | 87.0 |
| MS.gene050766.t1 | AT1G07520 | 49.474 | 95 | 36 | 3 | 24 | 113 | 119 | 206 | 2.34e-19 | 87.0 |
| MS.gene050766.t1 | AT1G07520 | 49.474 | 95 | 36 | 3 | 24 | 113 | 283 | 370 | 2.86e-19 | 87.0 |
| MS.gene050766.t1 | AT1G07520 | 49.474 | 95 | 36 | 3 | 24 | 113 | 284 | 371 | 2.97e-19 | 87.0 |
| MS.gene050766.t1 | AT2G29060 | 51.282 | 78 | 38 | 0 | 41 | 118 | 264 | 341 | 5.20e-19 | 86.3 |
| MS.gene050766.t1 | AT2G29060 | 51.282 | 78 | 38 | 0 | 41 | 118 | 301 | 378 | 5.56e-19 | 86.3 |
| MS.gene050766.t1 | AT2G37650 | 55.714 | 70 | 31 | 0 | 49 | 118 | 335 | 404 | 3.63e-18 | 83.6 |
| MS.gene050766.t1 | AT2G37650 | 55.714 | 70 | 31 | 0 | 49 | 118 | 323 | 392 | 3.90e-18 | 83.6 |
| MS.gene050766.t1 | AT2G29065 | 57.627 | 59 | 25 | 0 | 55 | 113 | 246 | 304 | 1.17e-13 | 70.5 |
| MS.gene050766.t1 | AT3G46600 | 36.607 | 112 | 67 | 3 | 27 | 138 | 149 | 256 | 1.46e-13 | 70.1 |
| MS.gene050766.t1 | AT3G46600 | 38.144 | 97 | 59 | 1 | 42 | 138 | 193 | 288 | 2.52e-13 | 69.3 |
| MS.gene050766.t1 | AT5G59450 | 45.333 | 75 | 38 | 1 | 41 | 112 | 204 | 278 | 4.98e-13 | 68.6 |
| MS.gene050766.t1 | AT5G47530 | 57.895 | 57 | 21 | 1 | 182 | 235 | 190 | 246 | 4.91e-12 | 65.5 |
| MS.gene050766.t1 | AT3G25290 | 72.222 | 36 | 10 | 0 | 200 | 235 | 220 | 255 | 8.44e-12 | 64.7 |
| MS.gene050766.t1 | AT3G25290 | 72.222 | 36 | 10 | 0 | 200 | 235 | 220 | 255 | 8.44e-12 | 64.7 |
| MS.gene050766.t1 | AT4G17280 | 72.222 | 36 | 10 | 0 | 200 | 235 | 219 | 254 | 1.51e-11 | 63.9 |
| MS.gene050766.t1 | AT4G12980 | 69.444 | 36 | 11 | 0 | 200 | 235 | 221 | 256 | 1.86e-11 | 63.5 |
| MS.gene050766.t1 | AT5G35735 | 75.676 | 37 | 7 | 1 | 199 | 235 | 210 | 244 | 2.68e-11 | 63.2 |
| MS.gene050766.t1 | AT3G46600 | 39.506 | 81 | 48 | 1 | 58 | 138 | 1 | 80 | 5.49e-11 | 62.0 |
Find 0 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTATACAAAAAAAAAATGAA+TGG | - | 51769:10176-10195 | MS.gene050766:intron | 15.0% |
| !! | TGAACATAAATAATTATAAC+TGG | + | 51769:10686-10705 | None:intergenic | 15.0% |
| !! | ATCAAGTTTGTAAACTATAA+TGG | - | 51769:9286-9305 | MS.gene050766:intron | 20.0% |
| !! | ATCCTTAATCAATATCAAAA+GGG | + | 51769:10950-10969 | None:intergenic | 20.0% |
| !!! | AACATTTTTAGCAAATTTTC+AGG | + | 51769:9431-9450 | None:intergenic | 20.0% |
| !!! | TAAAAATGTTCTTTGAGTTT+TGG | + | 51769:9124-9143 | None:intergenic | 20.0% |
| !!! | TAATGTTAAAACTTTTTAGC+AGG | + | 51769:9171-9190 | None:intergenic | 20.0% |
| !!! | TACTATGTTTTCCTTAATTT+TGG | - | 51769:10561-10580 | MS.gene050766:intron | 20.0% |
| !!! | TTGTATAGAATATTTTGTGT+TGG | - | 51769:10417-10436 | MS.gene050766:CDS | 20.0% |
| ! | CATCCTTAATCAATATCAAA+AGG | + | 51769:10951-10970 | None:intergenic | 25.0% |
| ! | GCTAATAAAGTTATTGCATT+TGG | - | 51769:8983-9002 | MS.gene050766:CDS | 25.0% |
| ! | GTACAGAAATTTGAATTCAT+TGG | - | 51769:9487-9506 | MS.gene050766:CDS | 25.0% |
| ! | GTCTTATAAGCTAACTTTAT+TGG | - | 51769:9988-10007 | MS.gene050766:CDS | 25.0% |
| ! | TGCATTCAACTTAAGATATT+TGG | - | 51769:10372-10391 | MS.gene050766:CDS | 25.0% |
| ! | TTTATGCATGTCAATATGAA+TGG | - | 51769:10802-10821 | MS.gene050766:intron | 25.0% |
| !! | AATTTGGATGCTTTATTAAC+AGG | - | 51769:10460-10479 | MS.gene050766:CDS | 25.0% |
| !! | ACATCAGTTTTTAACAACTT+AGG | + | 51769:9221-9240 | None:intergenic | 25.0% |
| !! | GTTAATAAAGCATCCAAATT+TGG | + | 51769:10460-10479 | None:intergenic | 25.0% |
| !! | GTTAGTTTAGACCAAAATTA+AGG | + | 51769:10575-10594 | None:intergenic | 25.0% |
| !! | TTTTCTTTTTGTAAGTTGCA+TGG | + | 51769:9513-9532 | None:intergenic | 25.0% |
| !!! | ATAGTCTTGGTTAACTTTTT+TGG | - | 51769:9385-9404 | MS.gene050766:intron | 25.0% |
| !!! | CAACCATTTTTTTTATAAGC+AGG | + | 51769:10400-10419 | None:intergenic | 25.0% |
| !!! | TAATTTTGGTCTAAACTAAC+AGG | - | 51769:10575-10594 | MS.gene050766:intron | 25.0% |
| !!! | TACCCTTTTGATATTGATTA+AGG | - | 51769:10945-10964 | MS.gene050766:intron | 25.0% |
| !!! | TAGAATATTTTGTGTTGGTT+TGG | - | 51769:10422-10441 | MS.gene050766:CDS | 25.0% |
| !!! | TGCAGGAATTTTGATAATAT+TGG | - | 51769:10050-10069 | MS.gene050766:intron | 25.0% |
| !!! | TTAATTGTTTTTCAGACTCA+TGG | - | 51769:10971-10990 | MS.gene050766:intron | 25.0% |
| !!! | TTTGTGATTTTGATTGCAAA+AGG | - | 51769:9893-9912 | MS.gene050766:intron | 25.0% |
| AAGTCACAAGTAACAACAAT+AGG | - | 51769:10734-10753 | MS.gene050766:intron | 30.0% | |
| ACATAGTAAATAAGTCAGCA+AGG | + | 51769:10549-10568 | None:intergenic | 30.0% | |
| ACTTCTATCAAAATTAGCAG+TGG | - | 51769:10101-10120 | MS.gene050766:intron | 30.0% | |
| ATGAATTGTTGAAGCAGATT+AGG | - | 51769:9715-9734 | MS.gene050766:intron | 30.0% | |
| CAAGTAACAACAATAGGTTA+TGG | - | 51769:10740-10759 | MS.gene050766:intron | 30.0% | |
| GAGCCTGCTTATAAAAAAAA+TGG | - | 51769:10394-10413 | MS.gene050766:CDS | 30.0% | |
| GCTGATTAGAATACCAAATT+TGG | - | 51769:10444-10463 | MS.gene050766:CDS | 30.0% | |
| GGCTCATTGTTACAATATAT+TGG | - | 51769:10312-10331 | MS.gene050766:CDS | 30.0% | |
| TAGTAGTTAAAGAGAAGCTT+TGG | - | 51769:9066-9085 | MS.gene050766:CDS | 30.0% | |
| TCTGATGTTTAAGAATTTGC+TGG | - | 51769:9361-9380 | MS.gene050766:intron | 30.0% | |
| TGAACTTTAACAACCTCTTA+TGG | - | 51769:10291-10310 | MS.gene050766:CDS | 30.0% | |
| TTGCTGATCAATTGAATAAC+AGG | - | 51769:10211-10230 | MS.gene050766:intron | 30.0% | |
| ! | AATCAGCACTAAACATCTTT+TGG | + | 51769:9854-9873 | None:intergenic | 30.0% |
| ! | CTGATGTAATGATAGTTTGT+TGG | - | 51769:9234-9253 | MS.gene050766:intron | 30.0% |
| ! | GGAATAGAAGTTTTACATAG+AGG | - | 51769:10232-10251 | MS.gene050766:intron | 30.0% |
| ! | TGGTAGAGTCATGATTATTT+TGG | - | 51769:9254-9273 | MS.gene050766:intron | 30.0% |
| ACATAAGGTAAAACCAAGCA+AGG | + | 51769:11081-11100 | None:intergenic | 35.0% | |
| AGTAGCTAGAATGAAAGTTG+AGG | - | 51769:10511-10530 | MS.gene050766:CDS | 35.0% | |
| GTTATTGCATTTGGCTGTAT+TGG | - | 51769:8992-9011 | MS.gene050766:CDS | 35.0% | |
| TTGTAACAATGAGCCATAAG+AGG | + | 51769:10307-10326 | None:intergenic | 35.0% | |
| ! | TAGTTAAAGAGAAGCTTTGG+AGG | - | 51769:9069-9088 | MS.gene050766:CDS | 35.0% |
| ! | TTTGATAATATTGGCAGCGT+TGG | - | 51769:10059-10078 | MS.gene050766:intron | 35.0% |
| !! | AGAATTTGCTGGTATAGTCT+TGG | - | 51769:9372-9391 | MS.gene050766:intron | 35.0% |
| !! | GTAAACTATAATGGTGCCAT+TGG | - | 51769:9295-9314 | MS.gene050766:intron | 35.0% |
| !!! | AGTGCTGATTTTGATTGTGT+AGG | - | 51769:9864-9883 | MS.gene050766:intron | 35.0% |
| AAGGTATGTTAGCATGGGTT+CGG | - | 51769:10154-10173 | MS.gene050766:CDS | 40.0% | |
| ACCTTTCAGCATCATAGAGA+TGG | + | 51769:9958-9977 | None:intergenic | 40.0% | |
| ATGCAACCAAAGTGATCCAA+TGG | + | 51769:9314-9333 | None:intergenic | 40.0% | |
| CAATAGGTTATGGTCAACAG+TGG | - | 51769:10750-10769 | MS.gene050766:intron | 40.0% | |
| CTGTGTCTGCTAATGACAAT+AGG | - | 51769:9685-9704 | MS.gene050766:intron | 40.0% | |
| GCTGATTGGCAAGTAACATA+AGG | + | 51769:11096-11115 | None:intergenic | 40.0% | |
| TCAAATATGCAGACCTTGCT+TGG | - | 51769:11065-11084 | MS.gene050766:CDS | 40.0% | |
| TCAAGCCAATCAAACTACAG+TGG | - | 51769:10621-10640 | MS.gene050766:intron | 40.0% | |
| TCCATCTCTATGATGCTGAA+AGG | - | 51769:9954-9973 | MS.gene050766:CDS | 40.0% | |
| TGAACAAAAGGATGGATCAG+TGG | - | 51769:9548-9567 | MS.gene050766:intron | 40.0% | |
| TTGGATCACTTTGGTTGCAT+AGG | - | 51769:9314-9333 | MS.gene050766:intron | 40.0% | |
| TTGTGCACACAGAACCAAAA+GGG | + | 51769:9664-9683 | None:intergenic | 40.0% | |
| TTGTGTGCTGAACAAAAGGA+TGG | - | 51769:9540-9559 | MS.gene050766:intron | 40.0% | |
| ! | GCTGAAAGGTATGTTAGCAT+GGG | - | 51769:10149-10168 | MS.gene050766:CDS | 40.0% |
| ! | TCCTTTTGTTCAGCACACAA+CGG | + | 51769:9540-9559 | None:intergenic | 40.0% |
| ! | TGCTGAAAGGTATGTTAGCA+TGG | - | 51769:10148-10167 | MS.gene050766:CDS | 40.0% |
| ! | TGTGATTGCAAGGTACTTGA+AGG | - | 51769:11039-11058 | MS.gene050766:intron | 40.0% |
| AAATGCGATTGAAGCGCACA+TGG | - | 51769:9791-9810 | MS.gene050766:intron | 45.0% | |
| ACAAAAGGATGGATCAGTGG+TGG | - | 51769:9551-9570 | MS.gene050766:intron | 45.0% | |
| ACCTTTCAGCACTACAACTG+AGG | + | 51769:10139-10158 | None:intergenic | 45.0% | |
| AGAGGGATGTTGTGGATTTG+AGG | - | 51769:9637-9656 | MS.gene050766:intron | 45.0% | |
| AGCCAATCAAACTACAGTGG+TGG | - | 51769:10624-10643 | MS.gene050766:intron | 45.0% | |
| AGGTGATGCATCAGAGAGAA+TGG | - | 51769:9755-9774 | MS.gene050766:intron | 45.0% | |
| CACCACCACTGTAGTTTGAT+TGG | + | 51769:10629-10648 | None:intergenic | 45.0% | |
| CTTGTGCACACAGAACCAAA+AGG | + | 51769:9665-9684 | None:intergenic | 45.0% | |
| GAAGAAACAAGGGAGGAAGA+GGG | - | 51769:9620-9639 | MS.gene050766:intron | 45.0% | |
| GGGTACATTGCACAAAGACA+CGG | + | 51769:10930-10949 | None:intergenic | 45.0% | |
| GGTACATTGCACAAAGACAC+GGG | + | 51769:10929-10948 | None:intergenic | 45.0% | |
| GTATGAATGTACGACTGTGC+AGG | - | 51769:10033-10052 | MS.gene050766:CDS | 45.0% | |
| TAGGTTATGGTCAACAGTGG+AGG | - | 51769:10753-10772 | MS.gene050766:intron | 45.0% | |
| TATGGTCAACAGTGGAGGTA+GGG | - | 51769:10758-10777 | MS.gene050766:intron | 45.0% | |
| TGGAGGTAGGGCTAAAGATT+AGG | - | 51769:10770-10789 | MS.gene050766:intron | 45.0% | |
| TTATGGTCAACAGTGGAGGT+AGG | - | 51769:10757-10776 | MS.gene050766:intron | 45.0% | |
| ! | AGTTACTTTCTTGCCTCAGG+GGG | - | 51769:9917-9936 | MS.gene050766:intron | 45.0% |
| ! | CAGTTACTTTCTTGCCTCAG+GGG | - | 51769:9916-9935 | MS.gene050766:intron | 45.0% |
| ! | GATGTTTTTCCTCTTGCAGC+TGG | + | 51769:10603-10622 | None:intergenic | 45.0% |
| ! | GCAGTTACTTTCTTGCCTCA+GGG | - | 51769:9915-9934 | MS.gene050766:intron | 45.0% |
| ! | TCCTCAGTTGTAGTGCTGAA+AGG | - | 51769:10135-10154 | MS.gene050766:CDS | 45.0% |
| ! | TGTGGATTTGAGGACCCTTT+TGG | - | 51769:9647-9666 | MS.gene050766:intron | 45.0% |
| !! | ACACAGGTTGGTGAACTTGA+TGG | - | 51769:9582-9601 | MS.gene050766:intron | 45.0% |
| !! | AGGAAGCATTCTTGTCCTTC+AGG | - | 51769:9735-9754 | MS.gene050766:intron | 45.0% |
| !! | AGGTTGGTGAACTTGATGGA+GGG | - | 51769:9586-9605 | MS.gene050766:intron | 45.0% |
| !! | ATGGTGCCATTGGATCACTT+TGG | - | 51769:9305-9324 | MS.gene050766:intron | 45.0% |
| !! | TGGCAGCGTTGGTAATCATT+CGG | - | 51769:10070-10089 | MS.gene050766:intron | 45.0% |
| AAGGCGCGTTCGAAGAAACA+AGG | - | 51769:9609-9628 | MS.gene050766:intron | 50.0% | |
| AGGCGCGTTCGAAGAAACAA+GGG | - | 51769:9610-9629 | MS.gene050766:intron | 50.0% | |
| CGAAGAAACAAGGGAGGAAG+AGG | - | 51769:9619-9638 | MS.gene050766:intron | 50.0% | |
| CTCTCTGATGCATCACCTGA+AGG | + | 51769:9753-9772 | None:intergenic | 50.0% | |
| CTTGCAATCACAGCTCCCAA+AGG | + | 51769:11031-11050 | None:intergenic | 50.0% | |
| GCCGTTGTGTGCTGAACAAA+AGG | - | 51769:9536-9555 | MS.gene050766:intron | 50.0% | |
| GTGGAGAGTAGAACACAGGT+TGG | - | 51769:9570-9589 | MS.gene050766:intron | 50.0% | |
| TAACAGGAACCAGCTGCAAG+AGG | - | 51769:10591-10610 | MS.gene050766:intron | 50.0% | |
| TGGTGAACTTGATGGAGGGA+AGG | - | 51769:9590-9609 | MS.gene050766:intron | 50.0% | |
| ! | AGTGCTGAATGCAGTGAGCT+GGG | - | 51769:10994-11013 | MS.gene050766:intron | 50.0% |
| ! | AGTGGTGGAGAGTAGAACAC+AGG | - | 51769:9566-9585 | MS.gene050766:intron | 50.0% |
| ! | CTTTGGGAGCTGTGATTGCA+AGG | - | 51769:11029-11048 | MS.gene050766:intron | 50.0% |
| ! | GGCAGTTACTTTCTTGCCTC+AGG | - | 51769:9914-9933 | MS.gene050766:intron | 50.0% |
| !! | CACATGGTTGGTGCTGGTAA+CGG | - | 51769:9807-9826 | MS.gene050766:intron | 50.0% |
| !! | CAGGTTGGTGAACTTGATGG+AGG | - | 51769:9585-9604 | MS.gene050766:intron | 50.0% |
| AGGGAGGAAGAGGGATGTTG+TGG | - | 51769:9629-9648 | MS.gene050766:intron | 55.0% | |
| CATACAATCTCGTCCCCCTG+AGG | + | 51769:9933-9952 | None:intergenic | 55.0% | |
| CGCGTTCGAAGAAACAAGGG+AGG | - | 51769:9613-9632 | MS.gene050766:intron | 55.0% | |
| GCGATTGAAGCGCACATGGT+TGG | - | 51769:9795-9814 | MS.gene050766:intron | 55.0% | |
| GTGCTGAATGCAGTGAGCTG+GGG | - | 51769:10995-11014 | MS.gene050766:intron | 55.0% | |
| TGCTGAATGCAGTGAGCTGG+GGG | - | 51769:10996-11015 | MS.gene050766:intron | 55.0% | |
| TGGGGGACCTTGATGCCTTT+GGG | - | 51769:11013-11032 | MS.gene050766:intron | 55.0% | |
| !! | CACAGCTCCCAAAGGCATCA+AGG | + | 51769:11023-11042 | None:intergenic | 55.0% |
| !! | GAGTGCTGAATGCAGTGAGC+TGG | - | 51769:10993-11012 | MS.gene050766:intron | 55.0% |
| CTGGGGGACCTTGATGCCTT+TGG | - | 51769:11012-11031 | MS.gene050766:intron | 60.0% | |
| ! | GAAGCGCACATGGTTGGTGC+TGG | - | 51769:9801-9820 | MS.gene050766:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51769 | gene | 8981 | 11126 | 8981 | ID=MS.gene050766 |
| 51769 | mRNA | 8981 | 11126 | 8981 | ID=MS.gene050766.t1;Parent=MS.gene050766 |
| 51769 | exon | 11052 | 11126 | 11052 | ID=MS.gene050766.t1.exon1;Parent=MS.gene050766.t1 |
| 51769 | CDS | 11052 | 11126 | 11052 | ID=cds.MS.gene050766.t1;Parent=MS.gene050766.t1 |
| 51769 | exon | 10279 | 10549 | 10279 | ID=MS.gene050766.t1.exon2;Parent=MS.gene050766.t1 |
| 51769 | CDS | 10279 | 10549 | 10279 | ID=cds.MS.gene050766.t1;Parent=MS.gene050766.t1 |
| 51769 | exon | 10132 | 10192 | 10132 | ID=MS.gene050766.t1.exon3;Parent=MS.gene050766.t1 |
| 51769 | CDS | 10132 | 10192 | 10132 | ID=cds.MS.gene050766.t1;Parent=MS.gene050766.t1 |
| 51769 | exon | 9932 | 10052 | 9932 | ID=MS.gene050766.t1.exon4;Parent=MS.gene050766.t1 |
| 51769 | CDS | 9932 | 10052 | 9932 | ID=cds.MS.gene050766.t1;Parent=MS.gene050766.t1 |
| 51769 | exon | 9445 | 9510 | 9445 | ID=MS.gene050766.t1.exon5;Parent=MS.gene050766.t1 |
| 51769 | CDS | 9445 | 9510 | 9445 | ID=cds.MS.gene050766.t1;Parent=MS.gene050766.t1 |
| 51769 | exon | 8981 | 9121 | 8981 | ID=MS.gene050766.t1.exon6;Parent=MS.gene050766.t1 |
| 51769 | CDS | 8981 | 9121 | 8981 | ID=cds.MS.gene050766.t1;Parent=MS.gene050766.t1 |
| Gene Sequence |
| Protein sequence |
