Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23138.t1 | XP_013450438.1 | 93.5 | 401 | 10 | 2 | 1 | 387 | 13 | 411 | 3.30E-213 | 750.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23138.t1 | F4I562 | 73.4 | 402 | 91 | 2 | 1 | 386 | 13 | 414 | 2.2e-178 | 626.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23138.t1 | A0A072U533 | 93.5 | 401 | 10 | 2 | 1 | 387 | 13 | 411 | 2.4e-213 | 750.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050768 | MS.gene23138 | 0.984274 | 4.36E-160 | -1.69E-46 |
| MS.gene050771 | MS.gene23138 | 0.966366 | 7.97E-126 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTCTTAAAATTCT+GGG | - | 51770:14290-14309 | MS.gene23138:intron | 10.0% |
| !!! | TTTTTATTTTCTTAAAATTC+TGG | - | 51770:14289-14308 | MS.gene23138:intron | 10.0% |
| !! | AATTTAATGTGTATAAGTTA+AGG | + | 51770:13514-13533 | None:intergenic | 15.0% |
| !!! | TTGTTATTATGTTTGATAAA+TGG | - | 51770:13587-13606 | MS.gene23138:intron | 15.0% |
| !! | AACCAAATAAATGATGAAAA+CGG | - | 51770:12422-12441 | MS.gene23138:intron | 20.0% |
| !! | AATTTAAGCTAATGAATTAC+AGG | - | 51770:14159-14178 | MS.gene23138:intron | 20.0% |
| !! | ACTAACAACATATGATTATT+GGG | - | 51770:12156-12175 | MS.gene23138:CDS | 20.0% |
| !! | AGAAAAGAAACTAAATATCA+CGG | + | 51770:13738-13757 | None:intergenic | 20.0% |
| !! | AGCAATTATGTTATTAGATT+CGG | + | 51770:12392-12411 | None:intergenic | 20.0% |
| !! | ATCTACATAAACTTCATTAT+TGG | + | 51770:12968-12987 | None:intergenic | 20.0% |
| !! | GAAAAACTTGAAAAGATAAT+GGG | + | 51770:11866-11885 | None:intergenic | 20.0% |
| !! | TAATAACATAATTGCTATAG+AGG | - | 51770:12396-12415 | MS.gene23138:intron | 20.0% |
| !!! | AATTTATAGTAAAGCATCTT+AGG | - | 51770:13530-13549 | MS.gene23138:intron | 20.0% |
| !!! | CTTAACTTTGACAATTTTAT+GGG | - | 51770:13052-13071 | MS.gene23138:intron | 20.0% |
| !!! | TCTTAACTTTGACAATTTTA+TGG | - | 51770:13051-13070 | MS.gene23138:intron | 20.0% |
| !!! | TTTGATTTGTTGTTTTGTTT+AGG | - | 51770:12715-12734 | MS.gene23138:intron | 20.0% |
| ! | AACAAAACAACAAATCAAAG+TGG | + | 51770:12714-12733 | None:intergenic | 25.0% |
| ! | AAGACTTTGCTAACAATATT+TGG | + | 51770:12850-12869 | None:intergenic | 25.0% |
| ! | AATAACAAAGTTGTCTTTGA+TGG | + | 51770:12087-12106 | None:intergenic | 25.0% |
| ! | ACAAAACAACAAATCAAAGT+GGG | + | 51770:12713-12732 | None:intergenic | 25.0% |
| ! | AGACAGTTAAATAATACAAC+TGG | - | 51770:12261-12280 | MS.gene23138:CDS | 25.0% |
| ! | AGTTAACATTCTTTCTAACA+AGG | - | 51770:14519-14538 | MS.gene23138:intron | 25.0% |
| ! | ATAAAATTTCAGCCGATATA+AGG | + | 51770:13847-13866 | None:intergenic | 25.0% |
| ! | ATAACTTAGTCAAATCCTTA+CGG | - | 51770:13303-13322 | MS.gene23138:intron | 25.0% |
| ! | ATGAAAGAAGTTGAAAGAAA+TGG | + | 51770:13922-13941 | None:intergenic | 25.0% |
| ! | ATTATGTTTGATAAATGGCA+AGG | - | 51770:13592-13611 | MS.gene23138:intron | 25.0% |
| ! | ATTTGACTAAGTTATACGTT+GGG | + | 51770:13298-13317 | None:intergenic | 25.0% |
| ! | CAATAATCATATGTTGTTAG+TGG | + | 51770:12157-12176 | None:intergenic | 25.0% |
| ! | CACAAATGAAAGAATTTGAT+TGG | + | 51770:14126-14145 | None:intergenic | 25.0% |
| ! | CACTAACAACATATGATTAT+TGG | - | 51770:12155-12174 | MS.gene23138:CDS | 25.0% |
| ! | CGAAAAACTTGAAAAGATAA+TGG | + | 51770:11867-11886 | None:intergenic | 25.0% |
| ! | GATGTAATCAATGATTATCT+TGG | - | 51770:12044-12063 | MS.gene23138:intron | 25.0% |
| ! | GGAACTAAAAATGAATTGAA+TGG | + | 51770:12010-12029 | None:intergenic | 25.0% |
| !! | AACCGTTTTCATCATTTATT+TGG | + | 51770:12427-12446 | None:intergenic | 25.0% |
| !! | AAGGTACTTACTTAATAAAC+AGG | - | 51770:14538-14557 | MS.gene23138:intron | 25.0% |
| !! | CATACTTGTTGCTAAAAATT+TGG | - | 51770:13939-13958 | MS.gene23138:intron | 25.0% |
| !! | CTAAAAATTTGGTTCATTCA+GGG | - | 51770:13950-13969 | MS.gene23138:intron | 25.0% |
| !!! | AATATTGACTTCCCAAATAA+CGG | + | 51770:14228-14247 | None:intergenic | 25.0% |
| !!! | CAAAACTTCATTTCTAGTAA+AGG | - | 51770:13697-13716 | MS.gene23138:CDS | 25.0% |
| !!! | CAACTTTGTTATTGTTTATG+AGG | - | 51770:12094-12113 | MS.gene23138:intron | 25.0% |
| !!! | TCATTTTTAGTTCCTTTGTA+GGG | - | 51770:12016-12035 | MS.gene23138:intron | 25.0% |
| !!! | TTCATTTTTAGTTCCTTTGT+AGG | - | 51770:12015-12034 | MS.gene23138:intron | 25.0% |
| !!! | TTTGTTTCTTTTGGATTGAT+CGG | - | 51770:12496-12515 | MS.gene23138:CDS | 25.0% |
| AAATGGATGCAACAATAAAC+AGG | - | 51770:12998-13017 | MS.gene23138:intron | 30.0% | |
| AACGGTTTCAAATCCTAATT+AGG | + | 51770:14210-14229 | None:intergenic | 30.0% | |
| AAGAGTCAAAAGTAGAAGAA+AGG | + | 51770:12632-12651 | None:intergenic | 30.0% | |
| ACAACATATGATTATTGGGT+TGG | - | 51770:12160-12179 | MS.gene23138:CDS | 30.0% | |
| ACTTCATTATTGGCATACTT+AGG | + | 51770:12958-12977 | None:intergenic | 30.0% | |
| ACTTTGCTAACAATATTTGG+CGG | + | 51770:12847-12866 | None:intergenic | 30.0% | |
| ATAAGGAGATAGTTGTGTTA+GGG | - | 51770:13264-13283 | MS.gene23138:intron | 30.0% | |
| ATAATAATGCCTCCTTGAAA+AGG | + | 51770:13193-13212 | None:intergenic | 30.0% | |
| ATAGATTATGTGTTCGACTT+CGG | - | 51770:13165-13184 | MS.gene23138:intron | 30.0% | |
| ATATTAGGTTCTGTAGTTAG+TGG | + | 51770:12805-12824 | None:intergenic | 30.0% | |
| ATCTGACTATTTAGACTTGA+TGG | + | 51770:14599-14618 | None:intergenic | 30.0% | |
| CAAAACAACAAATCAAAGTG+GGG | + | 51770:12712-12731 | None:intergenic | 30.0% | |
| CATATATGAATGATTTCAGC+TGG | + | 51770:13567-13586 | None:intergenic | 30.0% | |
| CTAAAATCCACTTGAAATGT+GGG | + | 51770:14783-14802 | None:intergenic | 30.0% | |
| CTTCATTATTGGCATACTTA+GGG | + | 51770:12957-12976 | None:intergenic | 30.0% | |
| GAACTTGTGAAACCTTATAT+CGG | - | 51770:13832-13851 | MS.gene23138:CDS | 30.0% | |
| GATTTGACTAAGTTATACGT+TGG | + | 51770:13299-13318 | None:intergenic | 30.0% | |
| GCAAATGAAAGAGTTAAATC+AGG | + | 51770:14041-14060 | None:intergenic | 30.0% | |
| GTAATCAATGATTATCTTGG+CGG | - | 51770:12047-12066 | MS.gene23138:intron | 30.0% | |
| GTGTGTTAAAATCTGTTTCA+TGG | - | 51770:14256-14275 | MS.gene23138:intron | 30.0% | |
| TATAAGGAGATAGTTGTGTT+AGG | - | 51770:13263-13282 | MS.gene23138:intron | 30.0% | |
| TGCATAAATACAGACTACTA+AGG | + | 51770:13899-13918 | None:intergenic | 30.0% | |
| TGTAGATCTTGTAGAACAAA+TGG | - | 51770:12981-13000 | MS.gene23138:intron | 30.0% | |
| TTCCTATGAATTGCAAATCA+TGG | + | 51770:11964-11983 | None:intergenic | 30.0% | |
| TTGAAAACTATTTCCCTGAT+TGG | - | 51770:13399-13418 | MS.gene23138:intron | 30.0% | |
| ! | AACTGTGGCTTTACATATAT+TGG | + | 51770:14358-14377 | None:intergenic | 30.0% |
| ! | ACTGTGGCTTTACATATATT+GGG | + | 51770:14357-14376 | None:intergenic | 30.0% |
| ! | AGGATTTGAAACCGTTATTT+GGG | - | 51770:14214-14233 | MS.gene23138:intron | 30.0% |
| ! | ATTAGCTTAAATTGTCCATC+AGG | + | 51770:14152-14171 | None:intergenic | 30.0% |
| ! | GCTAAAAATTTGGTTCATTC+AGG | - | 51770:13949-13968 | MS.gene23138:intron | 30.0% |
| ! | GTTTTTGTTAATGTAGCTGT+TGG | - | 51770:12756-12775 | MS.gene23138:intron | 30.0% |
| ! | TAGGATTTGAAACCGTTATT+TGG | - | 51770:14213-14232 | MS.gene23138:intron | 30.0% |
| !! | AACTTGAAAAGATAATGGGT+TGG | + | 51770:11862-11881 | None:intergenic | 30.0% |
| !! | TATTTTTGCACCTCTAATCT+GGG | - | 51770:13441-13460 | MS.gene23138:intron | 30.0% |
| AAAACCTTTGTAGAAACGGT+AGG | + | 51770:14865-14884 | None:intergenic | 35.0% | |
| AAACCTTTGTAGAAACGGTA+GGG | + | 51770:14864-14883 | None:intergenic | 35.0% | |
| AAGCTGAAACTGAACGTTAA+CGG | + | 51770:14455-14474 | None:intergenic | 35.0% | |
| ACTAATGTTCCAGACATTGA+GGG | + | 51770:14726-14745 | None:intergenic | 35.0% | |
| AGAATTTGATTGGATTCCCA+AGG | + | 51770:14116-14135 | None:intergenic | 35.0% | |
| AGGTTATACAGTAACCAATC+AGG | + | 51770:13416-13435 | None:intergenic | 35.0% | |
| ATCATCTCTTGCAGGATATT+AGG | + | 51770:12820-12839 | None:intergenic | 35.0% | |
| ATCCCAAAACCAGTTACAAA+TGG | + | 51770:11800-11819 | None:intergenic | 35.0% | |
| ATTATTGGCATACTTAGGGT+CGG | + | 51770:12953-12972 | None:intergenic | 35.0% | |
| CCTAAAATCCACTTGAAATG+TGG | + | 51770:14784-14803 | None:intergenic | 35.0% | |
| CTATGTCTGATGTCCTAATT+AGG | - | 51770:14194-14213 | MS.gene23138:intron | 35.0% | |
| CTCGAAAACCTTTGTAGAAA+CGG | + | 51770:14869-14888 | None:intergenic | 35.0% | |
| GCATTGAAACTTCAGATTGA+AGG | + | 51770:12603-12622 | None:intergenic | 35.0% | |
| GGCATGTATTATTACCTCAA+TGG | + | 51770:11943-11962 | None:intergenic | 35.0% | |
| GGTTATACAGTAACCAATCA+GGG | + | 51770:13415-13434 | None:intergenic | 35.0% | |
| GTGTATAAGTTAAGGACACA+AGG | + | 51770:13506-13525 | None:intergenic | 35.0% | |
| TCTGATAGATCACGATGTAA+AGG | + | 51770:14662-14681 | None:intergenic | 35.0% | |
| TGCCAACCATTACATTAAGA+CGG | + | 51770:14402-14421 | None:intergenic | 35.0% | |
| TTGGATGAGATGATAGACAA+TGG | - | 51770:12775-12794 | MS.gene23138:intron | 35.0% | |
| TTTCAGAGCAAACGTTACAA+GGG | + | 51770:12657-12676 | None:intergenic | 35.0% | |
| ! | AAATTTGGTTCATTCAGGGA+TGG | - | 51770:13954-13973 | MS.gene23138:intron | 35.0% |
| ! | AATAACAGGTTGTTGCTTGA+AGG | + | 51770:11833-11852 | None:intergenic | 35.0% |
| ! | ATTCTAGAGAAACAACTCAC+TGG | - | 51770:11757-11776 | MS.gene23138:CDS | 35.0% |
| ! | CTGTGGCTTTACATATATTG+GGG | + | 51770:14356-14375 | None:intergenic | 35.0% |
| ! | TGCCATGATTTGCAATTCAT+AGG | - | 51770:11959-11978 | MS.gene23138:CDS | 35.0% |
| ! | TTTTCAGAGCAAACGTTACA+AGG | + | 51770:12658-12677 | None:intergenic | 35.0% |
| ! | TTTTGGATTGATCGGAGTAT+AGG | - | 51770:12504-12523 | MS.gene23138:CDS | 35.0% |
| !! | CCACATTTCAAGTGGATTTT+AGG | - | 51770:14781-14800 | MS.gene23138:CDS | 35.0% |
| !! | GTATTTTTGCACCTCTAATC+TGG | - | 51770:13440-13459 | MS.gene23138:intron | 35.0% |
| !! | TTGTAGTCATTGTGCCATTT+GGG | - | 51770:12467-12486 | MS.gene23138:intron | 35.0% |
| !!! | CAAGTGGATTTTAGGATCAT+GGG | - | 51770:14789-14808 | MS.gene23138:CDS | 35.0% |
| !!! | CTCCATTTGTAACTGGTTTT+GGG | - | 51770:11795-11814 | MS.gene23138:CDS | 35.0% |
| !!! | TCAAGTGGATTTTAGGATCA+TGG | - | 51770:14788-14807 | MS.gene23138:CDS | 35.0% |
| !!! | TCTTTTCAAGTTTTTCGCGA+TGG | - | 51770:11870-11889 | MS.gene23138:CDS | 35.0% |
| AAGGCCGAAATCTAACACAA+GGG | + | 51770:14097-14116 | None:intergenic | 40.0% | |
| AGATCAGCTGATAAGATGCA+AGG | + | 51770:14481-14500 | None:intergenic | 40.0% | |
| AGATGTACCAACCAAAGAGT+AGG | - | 51770:13625-13644 | MS.gene23138:intron | 40.0% | |
| AGCTTAAATTGTCCATCAGG+AGG | + | 51770:14149-14168 | None:intergenic | 40.0% | |
| AGTTGAAATGCCACCTTTGA+TGG | - | 51770:11917-11936 | MS.gene23138:CDS | 40.0% | |
| ATAGCAGGACTAACATAGGT+AGG | + | 51770:13220-13239 | None:intergenic | 40.0% | |
| ATCTCCTTATATCCGAGCTT+GGG | + | 51770:13254-13273 | None:intergenic | 40.0% | |
| ATGCATAGCAGGACTAACAT+AGG | + | 51770:13224-13243 | None:intergenic | 40.0% | |
| ATGTACCAACCAAAGAGTAG+GGG | - | 51770:13627-13646 | MS.gene23138:intron | 40.0% | |
| ATTACCTCAATGGCCATCAA+AGG | + | 51770:11933-11952 | None:intergenic | 40.0% | |
| ATTAGGACATCAGACATAGC+TGG | + | 51770:14193-14212 | None:intergenic | 40.0% | |
| ATTAGTGCTTGAGACTGGAA+TGG | - | 51770:14740-14759 | MS.gene23138:CDS | 40.0% | |
| CAAGTAAATTCCCACATCAC+TGG | - | 51770:14011-14030 | MS.gene23138:intron | 40.0% | |
| CACTAATGTTCCAGACATTG+AGG | + | 51770:14727-14746 | None:intergenic | 40.0% | |
| CCGTCCACAACAATAACAAT+CGG | - | 51770:12565-12584 | MS.gene23138:CDS | 40.0% | |
| CGTATTTGATTCATGCCGTA+AGG | + | 51770:13321-13340 | None:intergenic | 40.0% | |
| CTAATGTTCCAGACATTGAG+GGG | + | 51770:14725-14744 | None:intergenic | 40.0% | |
| CTCACATCATCAAGGATTGA+AGG | + | 51770:14068-14087 | None:intergenic | 40.0% | |
| CTGGTGAAGTGTGAGATTAA+TGG | - | 51770:13981-14000 | MS.gene23138:intron | 40.0% | |
| CTGTTCAGTAAGTCAGCAAA+AGG | + | 51770:13788-13807 | None:intergenic | 40.0% | |
| CTTTGAGCAAAGTTATGAGG+AGG | + | 51770:12544-12563 | None:intergenic | 40.0% | |
| GAAACAAAGTCAAGCCCAAA+TGG | + | 51770:12484-12503 | None:intergenic | 40.0% | |
| GAAGTGTGAGATTAATGGTG+AGG | - | 51770:13986-14005 | MS.gene23138:intron | 40.0% | |
| GACATGCCGTCTTAATGTAA+TGG | - | 51770:14393-14412 | MS.gene23138:intron | 40.0% | |
| GATGTACCAACCAAAGAGTA+GGG | - | 51770:13626-13645 | MS.gene23138:intron | 40.0% | |
| GGACTTTGAGCAAAGTTATG+AGG | + | 51770:12547-12566 | None:intergenic | 40.0% | |
| TAATGTTCCAGACATTGAGG+GGG | + | 51770:14724-14743 | None:intergenic | 40.0% | |
| TACAAATGGAGCGATCAACA+CGG | + | 51770:11786-11805 | None:intergenic | 40.0% | |
| TATCTCCTTATATCCGAGCT+TGG | + | 51770:13255-13274 | None:intergenic | 40.0% | |
| TCCACCCTTGTGTTAGATTT+CGG | - | 51770:14090-14109 | MS.gene23138:intron | 40.0% | |
| TGAATGATTTCAGCTGGCTA+CGG | + | 51770:13561-13580 | None:intergenic | 40.0% | |
| TGACTTCAAATTCACCTGCT+CGG | + | 51770:14899-14918 | None:intergenic | 40.0% | |
| TGATCTATCAGACATGCACT+TGG | - | 51770:14670-14689 | MS.gene23138:intron | 40.0% | |
| TGCCGTCTTAATGTAATGGT+TGG | - | 51770:14397-14416 | MS.gene23138:intron | 40.0% | |
| TGGTCTGCAAATAGACAAAC+TGG | - | 51770:14824-14843 | MS.gene23138:intron | 40.0% | |
| TGTCACACACTGATACATGT+CGG | - | 51770:12206-12225 | MS.gene23138:CDS | 40.0% | |
| TGTCTTTCCCACATTTCAAG+TGG | - | 51770:14773-14792 | MS.gene23138:CDS | 40.0% | |
| TTACATCAGCTACCCTACAA+AGG | + | 51770:12031-12050 | None:intergenic | 40.0% | |
| TTAGTTATCCCCCTACTCTT+TGG | + | 51770:13639-13658 | None:intergenic | 40.0% | |
| TTGATCGCTCCATTTGTAAC+TGG | - | 51770:11788-11807 | MS.gene23138:CDS | 40.0% | |
| TTGGTTACTGTATAACCTGC+TGG | - | 51770:13418-13437 | MS.gene23138:intron | 40.0% | |
| TTGTGTTAGATTTCGGCCTT+GGG | - | 51770:14097-14116 | MS.gene23138:intron | 40.0% | |
| ! | AAAGCTTTATCCCACTGAGT+AGG | + | 51770:13355-13374 | None:intergenic | 40.0% |
| ! | AAAGTCTTAAGCGTTGTGAC+TGG | - | 51770:12862-12881 | MS.gene23138:intron | 40.0% |
| ! | AAGCTTTATCCCACTGAGTA+GGG | + | 51770:13354-13373 | None:intergenic | 40.0% |
| ! | CCGATTGTTATTGTTGTGGA+CGG | + | 51770:12568-12587 | None:intergenic | 40.0% |
| ! | CTTGTAGTCATTGTGCCATT+TGG | - | 51770:12466-12485 | MS.gene23138:intron | 40.0% |
| ! | GTGTCCGATTGTTATTGTTG+TGG | + | 51770:12572-12591 | None:intergenic | 40.0% |
| !! | CTTCAATCCTTGATGATGTG+AGG | - | 51770:14066-14085 | MS.gene23138:intron | 40.0% |
| !! | GCTCCATTTGTAACTGGTTT+TGG | - | 51770:11794-11813 | MS.gene23138:CDS | 40.0% |
| !! | GGGCTTGACTTTGTTTCTTT+TGG | - | 51770:12487-12506 | MS.gene23138:intron | 40.0% |
| !!! | CTTTTGCTGACTTACTGAAC+AGG | - | 51770:13786-13805 | MS.gene23138:CDS | 40.0% |
| !!! | TCGCGATGGAATCACTTTTT+TGG | - | 51770:11884-11903 | MS.gene23138:CDS | 40.0% |
| AATCAGGTAGACCAGTGATG+TGG | + | 51770:14025-14044 | None:intergenic | 45.0% | |
| ACGGAATCAACTGTCTTTCC+AGG | + | 51770:14436-14455 | None:intergenic | 45.0% | |
| ACTGATACATGTCGGTGCAA+TGG | - | 51770:12214-12233 | MS.gene23138:CDS | 45.0% | |
| ATAAATGGCAAGGTACGCAG+CGG | - | 51770:13602-13621 | MS.gene23138:intron | 45.0% | |
| ATCAGGTAGACCAGTGATGT+GGG | + | 51770:14024-14043 | None:intergenic | 45.0% | |
| ATGAGGAGGAGATGACAGAT+AGG | + | 51770:12530-12549 | None:intergenic | 45.0% | |
| CAAGGCCGAAATCTAACACA+AGG | + | 51770:14098-14117 | None:intergenic | 45.0% | |
| CTTCAGATTGAAGGTGAGAC+TGG | + | 51770:12594-12613 | None:intergenic | 45.0% | |
| CTTGTGTTAGATTTCGGCCT+TGG | - | 51770:14096-14115 | MS.gene23138:intron | 45.0% | |
| CTTTCATTTGTGCCTCCTGA+TGG | - | 51770:14134-14153 | MS.gene23138:intron | 45.0% | |
| GACTTCAAATTCACCTGCTC+GGG | + | 51770:14898-14917 | None:intergenic | 45.0% | |
| GCTGATCTGACTTCAACTCA+TGG | - | 51770:14493-14512 | MS.gene23138:intron | 45.0% | |
| GGAACATTAGTGCTTGAGAC+TGG | - | 51770:14735-14754 | MS.gene23138:CDS | 45.0% | |
| GTACCCTACCGTTTCTACAA+AGG | - | 51770:14858-14877 | MS.gene23138:intron | 45.0% | |
| GTTGGCATGAGAAATGATCC+TGG | - | 51770:14415-14434 | MS.gene23138:intron | 45.0% | |
| TCAGCTGATAAGATGCAAGG+AGG | + | 51770:14478-14497 | None:intergenic | 45.0% | |
| TGAAAATGTTGCCTGAGTGC+TGG | - | 51770:12672-12691 | MS.gene23138:CDS | 45.0% | |
| TGTACCAACCAAAGAGTAGG+GGG | - | 51770:13628-13647 | MS.gene23138:intron | 45.0% | |
| TTAGTCCTGCTATGCATAGC+AGG | - | 51770:13227-13246 | MS.gene23138:intron | 45.0% | |
| TTAGTGCCAACCCAGATTAG+AGG | + | 51770:13454-13473 | None:intergenic | 45.0% | |
| TTATCCCCCTACTCTTTGGT+TGG | + | 51770:13635-13654 | None:intergenic | 45.0% | |
| TTCATTCAGGGATGGTACTC+TGG | - | 51770:13962-13981 | MS.gene23138:intron | 45.0% | |
| TTTATCCCACTGAGTAGGGT+CGG | + | 51770:13350-13369 | None:intergenic | 45.0% | |
| TTTGCACCTCTAATCTGGGT+TGG | - | 51770:13445-13464 | MS.gene23138:intron | 45.0% | |
| ! | AAGCCACAGTTGACTTCAGA+TGG | - | 51770:14367-14386 | MS.gene23138:intron | 45.0% |
| ! | AGAGGTGCAAAAATACCAGC+AGG | + | 51770:13436-13455 | None:intergenic | 45.0% |
| ! | ATTGAGGGGGCTTTATCCTT+TGG | + | 51770:14711-14730 | None:intergenic | 45.0% |
| ! | CACAGTTGACTTCAGATGGT+GGG | - | 51770:14371-14390 | MS.gene23138:intron | 45.0% |
| ! | GAGCAGGTGAATTTGAAGTC+AGG | - | 51770:14898-14917 | MS.gene23138:CDS | 45.0% |
| ! | GGTTGTTGCTTGAAGGAATG+AGG | + | 51770:11826-11845 | None:intergenic | 45.0% |
| ! | TCGACTTCGGTTCCTTTTCA+AGG | - | 51770:13178-13197 | MS.gene23138:intron | 45.0% |
| ! | TTGAGGGGGCTTTATCCTTT+GGG | + | 51770:14710-14729 | None:intergenic | 45.0% |
| !! | ACTTCGGTTCCTTTTCAAGG+AGG | - | 51770:13181-13200 | MS.gene23138:intron | 45.0% |
| !! | TGGGTTGGTGAAGCAATAAC+AGG | + | 51770:11847-11866 | None:intergenic | 45.0% |
| !!! | ATTCATTTATTTTTAAATTA+TGG | - | 51770:13077-13096 | MS.gene23138:intron | 5.0% |
| !!! | ATTTTAAGAAAATAAAAATT+TGG | + | 51770:14287-14306 | None:intergenic | 5.0% |
| !!! | TTTTAAGAAAATAAAAATTT+GGG | + | 51770:14286-14305 | None:intergenic | 5.0% |
| AATAGCCGACCCTACTCAGT+GGG | - | 51770:13342-13361 | MS.gene23138:intron | 50.0% | |
| ACACAAGATGCTGTACTGCC+TGG | + | 51770:12916-12935 | None:intergenic | 50.0% | |
| ACCTCAATGGCCATCAAAGG+TGG | + | 51770:11930-11949 | None:intergenic | 50.0% | |
| AGGTCCCAAGCTCGGATATA+AGG | - | 51770:13247-13266 | MS.gene23138:intron | 50.0% | |
| CAGACATGCACTTGGTCCAT+TGG | - | 51770:14678-14697 | MS.gene23138:intron | 50.0% | |
| CTTGTTCGCAACAGCATAGG+AGG | - | 51770:12366-12385 | MS.gene23138:intron | 50.0% | |
| GATAAAGCCCCCTCAATGTC+TGG | - | 51770:14714-14733 | MS.gene23138:intron | 50.0% | |
| GCACTTGTTCGCAACAGCAT+AGG | - | 51770:12363-12382 | MS.gene23138:intron | 50.0% | |
| GCCGAAATCTAACACAAGGG+TGG | + | 51770:14094-14113 | None:intergenic | 50.0% | |
| GGTGGAACCTCACATCATCA+AGG | + | 51770:14076-14095 | None:intergenic | 50.0% | |
| GTACAGCATCTTGTGTTCCC+TGG | - | 51770:12920-12939 | MS.gene23138:intron | 50.0% | |
| TAATAGCCGACCCTACTCAG+TGG | - | 51770:13341-13360 | MS.gene23138:intron | 50.0% | |
| TGTCAGCTGCGGTATTGTGT+AGG | - | 51770:12183-12202 | MS.gene23138:CDS | 50.0% | |
| ! | CCACAGTTGACTTCAGATGG+TGG | - | 51770:14370-14389 | MS.gene23138:intron | 50.0% |
| ! | CCACCATCTGAAGTCAACTG+TGG | + | 51770:14373-14392 | None:intergenic | 50.0% |
| !! | GGGCTTTATCCTTTGGGATC+CGG | + | 51770:14704-14723 | None:intergenic | 50.0% |
| !! | TATTGGGTTGGTGTCAGCTG+CGG | - | 51770:12172-12191 | MS.gene23138:CDS | 50.0% |
| AATGTGAGCGACACGCTTCC+AGG | - | 51770:12895-12914 | MS.gene23138:intron | 55.0% | |
| AGAAAAGCCTGCCAGCACTC+AGG | + | 51770:12686-12705 | None:intergenic | 55.0% | |
| CATGCACTTGGTCCATTGGC+CGG | - | 51770:14682-14701 | MS.gene23138:intron | 55.0% | |
| CATGTCGGTGCAATGGTCGT+TGG | - | 51770:12221-12240 | MS.gene23138:CDS | 55.0% | |
| GCGGAGCTATCATCTCTTGC+AGG | + | 51770:12828-12847 | None:intergenic | 55.0% | |
| TGCATAGCAGGTCCCAAGCT+CGG | - | 51770:13239-13258 | MS.gene23138:intron | 55.0% | |
| TGGGACCTGCTATGCATAGC+AGG | + | 51770:13235-13254 | None:intergenic | 55.0% | |
| TTAGGGTCGGCTGTTCTCCA+GGG | + | 51770:12940-12959 | None:intergenic | 55.0% | |
| TTTCGAGCTCTTACCCGAGC+AGG | - | 51770:14882-14901 | MS.gene23138:CDS | 55.0% | |
| ! | GCCACCTTTGATGGCCATTG+AGG | - | 51770:11926-11945 | MS.gene23138:CDS | 55.0% |
| !! | AATGTTGCCTGAGTGCTGGC+AGG | - | 51770:12676-12695 | MS.gene23138:CDS | 55.0% |
| !! | ATCATGGGTGTCGCTCTCTC+TGG | - | 51770:14804-14823 | MS.gene23138:CDS | 55.0% |
| !! | ATCCTTTGGGATCCGGCCAA+TGG | + | 51770:14697-14716 | None:intergenic | 55.0% |
| CTTAGGGTCGGCTGTTCTCC+AGG | + | 51770:12941-12960 | None:intergenic | 60.0% | |
| GTCCATTGGCCGGATCCCAA+AGG | - | 51770:14692-14711 | MS.gene23138:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51770 | gene | 11750 | 14926 | 11750 | ID=MS.gene23138 |
| 51770 | mRNA | 11750 | 14926 | 11750 | ID=MS.gene23138.t1;Parent=MS.gene23138 |
| 51770 | exon | 14874 | 14926 | 14874 | ID=MS.gene23138.t1.exon1;Parent=MS.gene23138.t1 |
| 51770 | CDS | 14874 | 14926 | 14874 | ID=cds.MS.gene23138.t1;Parent=MS.gene23138.t1 |
| 51770 | exon | 14729 | 14838 | 14729 | ID=MS.gene23138.t1.exon2;Parent=MS.gene23138.t1 |
| 51770 | CDS | 14729 | 14838 | 14729 | ID=cds.MS.gene23138.t1;Parent=MS.gene23138.t1 |
| 51770 | exon | 14561 | 14650 | 14561 | ID=MS.gene23138.t1.exon3;Parent=MS.gene23138.t1 |
| 51770 | CDS | 14561 | 14650 | 14561 | ID=cds.MS.gene23138.t1;Parent=MS.gene23138.t1 |
| 51770 | exon | 13657 | 13904 | 13657 | ID=MS.gene23138.t1.exon4;Parent=MS.gene23138.t1 |
| 51770 | CDS | 13657 | 13904 | 13657 | ID=cds.MS.gene23138.t1;Parent=MS.gene23138.t1 |
| 51770 | exon | 12496 | 12705 | 12496 | ID=MS.gene23138.t1.exon5;Parent=MS.gene23138.t1 |
| 51770 | CDS | 12496 | 12705 | 12496 | ID=cds.MS.gene23138.t1;Parent=MS.gene23138.t1 |
| 51770 | exon | 12136 | 12343 | 12136 | ID=MS.gene23138.t1.exon6;Parent=MS.gene23138.t1 |
| 51770 | CDS | 12136 | 12343 | 12136 | ID=cds.MS.gene23138.t1;Parent=MS.gene23138.t1 |
| 51770 | exon | 11750 | 11995 | 11750 | ID=MS.gene23138.t1.exon7;Parent=MS.gene23138.t1 |
| 51770 | CDS | 11750 | 11995 | 11750 | ID=cds.MS.gene23138.t1;Parent=MS.gene23138.t1 |
| Gene Sequence |
| Protein sequence |
