Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050771.t1 | XP_013450438.1 | 99.5 | 411 | 2 | 0 | 1 | 411 | 1 | 411 | 2.30E-241 | 844.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050771.t1 | F4I562 | 78.3 | 414 | 86 | 1 | 1 | 410 | 1 | 414 | 9.9e-201 | 700.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050771.t1 | A0A072U533 | 99.5 | 411 | 2 | 0 | 1 | 411 | 1 | 411 | 1.7e-241 | 844.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050768 | MS.gene050771 | 0.983385 | 1.34E-157 | -1.69E-46 |
| MS.gene050771 | MS.gene23138 | 0.966366 | 7.97E-126 | -1.69E-46 |
| MS.gene050771 | MS.gene23142 | 0.983773 | 1.14E-158 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29199 | MS.gene050771 | PPI |
| MS.gene86178 | MS.gene050771 | PPI |
| MS.gene068109 | MS.gene050771 | PPI |
| MS.gene050771 | MS.gene44324 | PPI |
| MS.gene050771 | MS.gene21470 | PPI |
| MS.gene050771 | MS.gene056431 | PPI |
| MS.gene027687 | MS.gene050771 | PPI |
| MS.gene050771 | MS.gene09656 | PPI |
| MS.gene015312 | MS.gene050771 | PPI |
| MS.gene050771 | MS.gene008864 | PPI |
| MS.gene050001 | MS.gene050771 | PPI |
| MS.gene050771 | MS.gene059672 | PPI |
| MS.gene050771 | MS.gene067937 | PPI |
| MS.gene050771 | MS.gene010105 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050771.t1 | MTR_7g111870 | 99.513 | 411 | 2 | 0 | 1 | 411 | 1 | 411 | 0.0 | 848 |
| MS.gene050771.t1 | MTR_7g111870 | 99.697 | 330 | 1 | 0 | 1 | 330 | 1 | 330 | 0.0 | 682 |
| MS.gene050771.t1 | MTR_5g033500 | 26.067 | 445 | 266 | 11 | 4 | 410 | 7 | 426 | 7.15e-46 | 164 |
| MS.gene050771.t1 | MTR_8g069565 | 26.424 | 439 | 272 | 12 | 4 | 410 | 7 | 426 | 1.30e-45 | 163 |
| MS.gene050771.t1 | MTR_3g112190 | 27.252 | 444 | 286 | 9 | 1 | 410 | 1 | 441 | 2.25e-44 | 160 |
| MS.gene050771.t1 | MTR_5g014330 | 29.315 | 365 | 220 | 11 | 76 | 410 | 81 | 437 | 2.38e-44 | 160 |
| MS.gene050771.t1 | MTR_5g066050 | 27.753 | 454 | 279 | 11 | 1 | 410 | 1 | 449 | 1.16e-43 | 158 |
| MS.gene050771.t1 | MTR_5g066050 | 27.912 | 455 | 278 | 11 | 1 | 410 | 1 | 450 | 3.24e-43 | 157 |
| MS.gene050771.t1 | MTR_5g014330 | 29.448 | 326 | 193 | 10 | 76 | 372 | 81 | 398 | 1.71e-39 | 146 |
| MS.gene050771.t1 | MTR_5g033500 | 27.358 | 318 | 181 | 6 | 4 | 293 | 7 | 302 | 3.99e-39 | 144 |
| MS.gene050771.t1 | MTR_4g022790 | 52.756 | 127 | 12 | 2 | 113 | 239 | 3 | 81 | 1.85e-31 | 115 |
| MS.gene050771.t1 | MTR_7g014365 | 44.828 | 116 | 32 | 3 | 108 | 223 | 24 | 107 | 5.92e-17 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050771.t1 | AT1G56590 | 78.261 | 414 | 86 | 1 | 1 | 410 | 1 | 414 | 0.0 | 703 |
| MS.gene050771.t1 | AT1G60780 | 29.494 | 356 | 212 | 8 | 79 | 410 | 86 | 426 | 3.13e-47 | 167 |
| MS.gene050771.t1 | AT1G10730 | 26.376 | 436 | 276 | 11 | 4 | 410 | 7 | 426 | 1.85e-44 | 160 |
| MS.gene050771.t1 | AT4G24550 | 27.974 | 454 | 278 | 12 | 1 | 410 | 2 | 450 | 4.86e-44 | 159 |
| MS.gene050771.t1 | AT4G24550 | 28.756 | 386 | 236 | 9 | 1 | 349 | 2 | 385 | 4.66e-43 | 155 |
| MS.gene050771.t1 | AT4G24550 | 29.333 | 375 | 226 | 9 | 1 | 338 | 2 | 374 | 1.41e-42 | 154 |
| MS.gene050771.t1 | AT5G46630 | 28.767 | 365 | 222 | 11 | 76 | 410 | 81 | 437 | 1.38e-41 | 152 |
| MS.gene050771.t1 | AT5G46630 | 29.023 | 348 | 210 | 10 | 76 | 394 | 81 | 420 | 2.38e-40 | 149 |
Find 0 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGATTAAATTGAAAAT+TGG | + | 51772:5392-5411 | None:intergenic | 10.0% |
| !! | AATTGATTAAATTGAAAATT+GGG | + | 51772:5391-5410 | None:intergenic | 10.0% |
| !!! | TTTTATTTTCTTAAAATTCT+GGG | - | 51772:7974-7993 | MS.gene050771:intron | 10.0% |
| !!! | TTTTTATTTTCTTAAAATTC+TGG | - | 51772:7973-7992 | MS.gene050771:intron | 10.0% |
| !! | AAAAACTTGAAAAAGATAAT+GGG | + | 51772:5549-5568 | None:intergenic | 15.0% |
| !! | AATTTAATGTGTATAAGTTA+AGG | + | 51772:7198-7217 | None:intergenic | 15.0% |
| !!! | TTGTTATTATGTTTGATAAA+TGG | - | 51772:7271-7290 | MS.gene050771:CDS | 15.0% |
| !! | AACCAAATAAATGATGAAAA+CGG | - | 51772:6106-6125 | MS.gene050771:CDS | 20.0% |
| !! | AATTTAAGCTAATGAATTAC+AGG | - | 51772:7843-7862 | MS.gene050771:intron | 20.0% |
| !! | ACTAACAACATATGATTATT+GGG | - | 51772:5840-5859 | MS.gene050771:CDS | 20.0% |
| !! | AGAAAAGAAACTAAATATCA+CGG | + | 51772:7422-7441 | None:intergenic | 20.0% |
| !! | AGCAATTATGTTATTAGATT+CGG | + | 51772:6076-6095 | None:intergenic | 20.0% |
| !! | ATCTACATAAACTTCATTAT+TGG | + | 51772:6652-6671 | None:intergenic | 20.0% |
| !! | GAAAAACTTGAAAAAGATAA+TGG | + | 51772:5550-5569 | None:intergenic | 20.0% |
| !! | TAATAACATAATTGCTATAG+AGG | - | 51772:6080-6099 | MS.gene050771:CDS | 20.0% |
| !!! | AATTTATAGTAAAGCATCTT+AGG | - | 51772:7214-7233 | MS.gene050771:intron | 20.0% |
| !!! | CTTAACTTTGACAATTTTAT+GGG | - | 51772:6736-6755 | MS.gene050771:intron | 20.0% |
| !!! | TCTTAACTTTGACAATTTTA+TGG | - | 51772:6735-6754 | MS.gene050771:intron | 20.0% |
| !!! | TTTGATTTGTTGTTTTGTTT+AGG | - | 51772:6399-6418 | MS.gene050771:intron | 20.0% |
| ! | AAAATTGGGAATTGAAGAAA+AGG | + | 51772:5377-5396 | None:intergenic | 25.0% |
| ! | AACAAAACAACAAATCAAAG+TGG | + | 51772:6398-6417 | None:intergenic | 25.0% |
| ! | AAGACTTTGCTAACAATATT+TGG | + | 51772:6534-6553 | None:intergenic | 25.0% |
| ! | AATAACAAAGTTGTCTTTGA+TGG | + | 51772:5771-5790 | None:intergenic | 25.0% |
| ! | AATTGAAGAAAAGGAAAGAA+GGG | + | 51772:5368-5387 | None:intergenic | 25.0% |
| ! | ACAAAACAACAAATCAAAGT+GGG | + | 51772:6397-6416 | None:intergenic | 25.0% |
| ! | AGACAGTTAAATAATACAAC+TGG | - | 51772:5945-5964 | MS.gene050771:intron | 25.0% |
| ! | AGTTAACATTCTTTCTAACA+AGG | - | 51772:8203-8222 | MS.gene050771:intron | 25.0% |
| ! | ATAAAATTTCAGCCGATATA+AGG | + | 51772:7531-7550 | None:intergenic | 25.0% |
| ! | ATAACTTAGTCAAATCCTTA+CGG | - | 51772:6987-7006 | MS.gene050771:intron | 25.0% |
| ! | ATGAAAGAAGTTGAAAGAAA+TGG | + | 51772:7606-7625 | None:intergenic | 25.0% |
| ! | ATTATGTTTGATAAATGGCA+AGG | - | 51772:7276-7295 | MS.gene050771:CDS | 25.0% |
| ! | ATTTGACTAAGTTATACGTT+GGG | + | 51772:6982-7001 | None:intergenic | 25.0% |
| ! | CAATAATCATATGTTGTTAG+TGG | + | 51772:5841-5860 | None:intergenic | 25.0% |
| ! | CACAAATGAAAGAATTTGAT+TGG | + | 51772:7810-7829 | None:intergenic | 25.0% |
| ! | CACTAACAACATATGATTAT+TGG | - | 51772:5839-5858 | MS.gene050771:CDS | 25.0% |
| ! | GATGTAATCAATGATTATCT+TGG | - | 51772:5728-5747 | MS.gene050771:CDS | 25.0% |
| ! | GGAACTAAAAATGAATTGAA+TGG | + | 51772:5694-5713 | None:intergenic | 25.0% |
| !! | AACCGTTTTCATCATTTATT+TGG | + | 51772:6111-6130 | None:intergenic | 25.0% |
| !! | AAGGTACTTACTTAATAAAC+AGG | - | 51772:8222-8241 | MS.gene050771:intron | 25.0% |
| !! | CATACTTGTTGCTAAAAATT+TGG | - | 51772:7623-7642 | MS.gene050771:intron | 25.0% |
| !! | CTAAAAATTTGGTTCATTCA+GGG | - | 51772:7634-7653 | MS.gene050771:intron | 25.0% |
| !!! | AATATTGACTTCCCAAATAA+CGG | + | 51772:7912-7931 | None:intergenic | 25.0% |
| !!! | CAAAACTTCATTTCTAGTAA+AGG | - | 51772:7381-7400 | MS.gene050771:CDS | 25.0% |
| !!! | CAACTTTGTTATTGTTTATG+AGG | - | 51772:5778-5797 | MS.gene050771:CDS | 25.0% |
| !!! | TCATTTTTAGTTCCTTTGTA+GGG | - | 51772:5700-5719 | MS.gene050771:intron | 25.0% |
| !!! | TTCATTTTTAGTTCCTTTGT+AGG | - | 51772:5699-5718 | MS.gene050771:intron | 25.0% |
| !!! | TTTGTTTCTTTTGGATTGAT+CGG | - | 51772:6180-6199 | MS.gene050771:CDS | 25.0% |
| AAATGGATGCAACAATAAAC+AGG | - | 51772:6682-6701 | MS.gene050771:intron | 30.0% | |
| AACGGTTTCAAATCCTAATT+AGG | + | 51772:7894-7913 | None:intergenic | 30.0% | |
| AAGAGTCAAAAGTAGAAGAA+AGG | + | 51772:6316-6335 | None:intergenic | 30.0% | |
| ACAACATATGATTATTGGGT+TGG | - | 51772:5844-5863 | MS.gene050771:CDS | 30.0% | |
| ACTTCATTATTGGCATACTT+AGG | + | 51772:6642-6661 | None:intergenic | 30.0% | |
| ACTTTGCTAACAATATTTGG+CGG | + | 51772:6531-6550 | None:intergenic | 30.0% | |
| ATAAGGAGATAGTTGTGTTA+GGG | - | 51772:6948-6967 | MS.gene050771:intron | 30.0% | |
| ATAATAATGCCTCCTTGAAA+AGG | + | 51772:6877-6896 | None:intergenic | 30.0% | |
| ATAGATTATGTGTTCGACTT+CGG | - | 51772:6849-6868 | MS.gene050771:intron | 30.0% | |
| ATATTAGGTTCTGTAGTTAG+TGG | + | 51772:6489-6508 | None:intergenic | 30.0% | |
| ATCTGACTATTTAGACTTGA+TGG | + | 51772:8283-8302 | None:intergenic | 30.0% | |
| CAAAACAACAAATCAAAGTG+GGG | + | 51772:6396-6415 | None:intergenic | 30.0% | |
| CATATATGAATGATTTCAGC+TGG | + | 51772:7251-7270 | None:intergenic | 30.0% | |
| CTAAAATCCACTTGAAATGT+GGG | + | 51772:8467-8486 | None:intergenic | 30.0% | |
| CTTCATTATTGGCATACTTA+GGG | + | 51772:6641-6660 | None:intergenic | 30.0% | |
| GAACTTGTGAAACCTTATAT+CGG | - | 51772:7516-7535 | MS.gene050771:intron | 30.0% | |
| GAATTGAAGAAAAGGAAAGA+AGG | + | 51772:5369-5388 | None:intergenic | 30.0% | |
| GATTTGACTAAGTTATACGT+TGG | + | 51772:6983-7002 | None:intergenic | 30.0% | |
| GCAAATGAAAGAGTTAAATC+AGG | + | 51772:7725-7744 | None:intergenic | 30.0% | |
| GTAATCAATGATTATCTTGG+CGG | - | 51772:5731-5750 | MS.gene050771:CDS | 30.0% | |
| GTGTGTTAAAATCTGTTTCA+TGG | - | 51772:7940-7959 | MS.gene050771:intron | 30.0% | |
| TATAAGGAGATAGTTGTGTT+AGG | - | 51772:6947-6966 | MS.gene050771:intron | 30.0% | |
| TGCATAAATACAGACTACTA+AGG | + | 51772:7583-7602 | None:intergenic | 30.0% | |
| TGTAGATCTTGTAGAACAAA+TGG | - | 51772:6665-6684 | MS.gene050771:intron | 30.0% | |
| TTCCTATGAATTGCAAATCA+TGG | + | 51772:5648-5667 | None:intergenic | 30.0% | |
| TTGAAAACTATTTCCCTGAT+TGG | - | 51772:7083-7102 | MS.gene050771:intron | 30.0% | |
| ! | AACTGTGGCTTTACATATAT+TGG | + | 51772:8042-8061 | None:intergenic | 30.0% |
| ! | ACTGTGGCTTTACATATATT+GGG | + | 51772:8041-8060 | None:intergenic | 30.0% |
| ! | AGGATTTGAAACCGTTATTT+GGG | - | 51772:7898-7917 | MS.gene050771:intron | 30.0% |
| ! | ATTAGCTTAAATTGTCCATC+AGG | + | 51772:7836-7855 | None:intergenic | 30.0% |
| ! | GCTAAAAATTTGGTTCATTC+AGG | - | 51772:7633-7652 | MS.gene050771:intron | 30.0% |
| ! | GTTTTTGTTAATGTAGCTGT+TGG | - | 51772:6440-6459 | MS.gene050771:intron | 30.0% |
| ! | TAGGATTTGAAACCGTTATT+TGG | - | 51772:7897-7916 | MS.gene050771:intron | 30.0% |
| !! | ACTTGAAAAAGATAATGGGT+TGG | + | 51772:5545-5564 | None:intergenic | 30.0% |
| !! | TATTTTTGCACCTCTAATCT+GGG | - | 51772:7125-7144 | MS.gene050771:intron | 30.0% |
| AAAACCTTTGTAGAAACGGT+AGG | + | 51772:8549-8568 | None:intergenic | 35.0% | |
| AAACCTTTGTAGAAACGGTA+GGG | + | 51772:8548-8567 | None:intergenic | 35.0% | |
| AAGCTGAAACTGAACGTTAA+CGG | + | 51772:8139-8158 | None:intergenic | 35.0% | |
| ACTAATGTTCCAGACATTGA+GGG | + | 51772:8410-8429 | None:intergenic | 35.0% | |
| AGAATTTGATTGGATTCCCA+AGG | + | 51772:7800-7819 | None:intergenic | 35.0% | |
| AGGTTATACAGTAACCAATC+AGG | + | 51772:7100-7119 | None:intergenic | 35.0% | |
| ATCATCTCTTGCAGGATATT+AGG | + | 51772:6504-6523 | None:intergenic | 35.0% | |
| ATCCCAAAACCAGTTACAAA+TGG | + | 51772:5483-5502 | None:intergenic | 35.0% | |
| ATTATTGGCATACTTAGGGT+CGG | + | 51772:6637-6656 | None:intergenic | 35.0% | |
| CCTAAAATCCACTTGAAATG+TGG | + | 51772:8468-8487 | None:intergenic | 35.0% | |
| CTATGTCTGATGTCCTAATT+AGG | - | 51772:7878-7897 | MS.gene050771:intron | 35.0% | |
| CTCGAAAACCTTTGTAGAAA+CGG | + | 51772:8553-8572 | None:intergenic | 35.0% | |
| GCATTGAAACTTCAGATTGA+AGG | + | 51772:6287-6306 | None:intergenic | 35.0% | |
| GGCATGTATTATTACCTCAA+TGG | + | 51772:5627-5646 | None:intergenic | 35.0% | |
| GGTTATACAGTAACCAATCA+GGG | + | 51772:7099-7118 | None:intergenic | 35.0% | |
| GTGTATAAGTTAAGGACACA+AGG | + | 51772:7190-7209 | None:intergenic | 35.0% | |
| TCTGATAGATCACGATGTAA+AGG | + | 51772:8346-8365 | None:intergenic | 35.0% | |
| TGCCAACCATTACATTAAGA+CGG | + | 51772:8086-8105 | None:intergenic | 35.0% | |
| TTGGATGAGATGATAGACAA+TGG | - | 51772:6459-6478 | MS.gene050771:intron | 35.0% | |
| TTTCAGAGCAAACGTTACAA+GGG | + | 51772:6341-6360 | None:intergenic | 35.0% | |
| ! | AAATTTGGTTCATTCAGGGA+TGG | - | 51772:7638-7657 | MS.gene050771:intron | 35.0% |
| ! | AATAACAGGTTGTTGCTTGA+AGG | + | 51772:5516-5535 | None:intergenic | 35.0% |
| ! | ATTCTAGAGAAACAACTCAC+TGG | - | 51772:5440-5459 | MS.gene050771:CDS | 35.0% |
| ! | ATTTTTCTTCTCTCCGATTC+CGG | - | 51772:5328-5347 | MS.gene050771:CDS | 35.0% |
| ! | CTGTGGCTTTACATATATTG+GGG | + | 51772:8040-8059 | None:intergenic | 35.0% |
| ! | TGCCATGATTTGCAATTCAT+AGG | - | 51772:5643-5662 | MS.gene050771:intron | 35.0% |
| ! | TTTTCAGAGCAAACGTTACA+AGG | + | 51772:6342-6361 | None:intergenic | 35.0% |
| ! | TTTTGGATTGATCGGAGTAT+AGG | - | 51772:6188-6207 | MS.gene050771:CDS | 35.0% |
| !! | CCACATTTCAAGTGGATTTT+AGG | - | 51772:8465-8484 | MS.gene050771:CDS | 35.0% |
| !! | GTATTTTTGCACCTCTAATC+TGG | - | 51772:7124-7143 | MS.gene050771:intron | 35.0% |
| !! | TTGTAGTCATTGTGCCATTT+GGG | - | 51772:6151-6170 | MS.gene050771:CDS | 35.0% |
| !!! | CAAGTGGATTTTAGGATCAT+GGG | - | 51772:8473-8492 | MS.gene050771:CDS | 35.0% |
| !!! | CTCCATTTGTAACTGGTTTT+GGG | - | 51772:5478-5497 | MS.gene050771:CDS | 35.0% |
| !!! | CTTTTTCAAGTTTTTCGCGA+TGG | - | 51772:5554-5573 | MS.gene050771:intron | 35.0% |
| !!! | TCAAGTGGATTTTAGGATCA+TGG | - | 51772:8472-8491 | MS.gene050771:CDS | 35.0% |
| AAGGCCGAAATCTAACACAA+GGG | + | 51772:7781-7800 | None:intergenic | 40.0% | |
| AGATCAGCTGATAAGATGCA+AGG | + | 51772:8165-8184 | None:intergenic | 40.0% | |
| AGATGTACCAACCAAAGAGT+AGG | - | 51772:7309-7328 | MS.gene050771:CDS | 40.0% | |
| AGCTTAAATTGTCCATCAGG+AGG | + | 51772:7833-7852 | None:intergenic | 40.0% | |
| AGTTGAAATGCCACCTTTGA+TGG | - | 51772:5601-5620 | MS.gene050771:intron | 40.0% | |
| ATAGCAGGACTAACATAGGT+AGG | + | 51772:6904-6923 | None:intergenic | 40.0% | |
| ATCTCCTTATATCCGAGCTT+GGG | + | 51772:6938-6957 | None:intergenic | 40.0% | |
| ATGCATAGCAGGACTAACAT+AGG | + | 51772:6908-6927 | None:intergenic | 40.0% | |
| ATGTACCAACCAAAGAGTAG+GGG | - | 51772:7311-7330 | MS.gene050771:CDS | 40.0% | |
| ATTACCTCAATGGCCATCAA+AGG | + | 51772:5617-5636 | None:intergenic | 40.0% | |
| ATTAGGACATCAGACATAGC+TGG | + | 51772:7877-7896 | None:intergenic | 40.0% | |
| ATTAGTGCTTGAGACTGGAA+TGG | - | 51772:8424-8443 | MS.gene050771:CDS | 40.0% | |
| CAAGTAAATTCCCACATCAC+TGG | - | 51772:7695-7714 | MS.gene050771:intron | 40.0% | |
| CACTAATGTTCCAGACATTG+AGG | + | 51772:8411-8430 | None:intergenic | 40.0% | |
| CCGTCCACAACAATAACAAT+CGG | - | 51772:6249-6268 | MS.gene050771:CDS | 40.0% | |
| CGATCTTGATTCATTCAGAG+AGG | - | 51772:5415-5434 | MS.gene050771:CDS | 40.0% | |
| CGTATTTGATTCATGCCGTA+AGG | + | 51772:7005-7024 | None:intergenic | 40.0% | |
| CTAATGTTCCAGACATTGAG+GGG | + | 51772:8409-8428 | None:intergenic | 40.0% | |
| CTCACATCATCAAGGATTGA+AGG | + | 51772:7752-7771 | None:intergenic | 40.0% | |
| CTGGTGAAGTGTGAGATTAA+TGG | - | 51772:7665-7684 | MS.gene050771:intron | 40.0% | |
| CTGTTCAGTAAGTCAGCAAA+AGG | + | 51772:7472-7491 | None:intergenic | 40.0% | |
| CTTTGAGCAAAGTTATGAGG+AGG | + | 51772:6228-6247 | None:intergenic | 40.0% | |
| GAAACAAAGTCAAGCCCAAA+TGG | + | 51772:6168-6187 | None:intergenic | 40.0% | |
| GAAGTGTGAGATTAATGGTG+AGG | - | 51772:7670-7689 | MS.gene050771:intron | 40.0% | |
| GACATGCCGTCTTAATGTAA+TGG | - | 51772:8077-8096 | MS.gene050771:intron | 40.0% | |
| GATGTACCAACCAAAGAGTA+GGG | - | 51772:7310-7329 | MS.gene050771:CDS | 40.0% | |
| GGACTTTGAGCAAAGTTATG+AGG | + | 51772:6231-6250 | None:intergenic | 40.0% | |
| TAATGTTCCAGACATTGAGG+GGG | + | 51772:8408-8427 | None:intergenic | 40.0% | |
| TACAAATGGAGCGATCAACA+CGG | + | 51772:5469-5488 | None:intergenic | 40.0% | |
| TATCTCCTTATATCCGAGCT+TGG | + | 51772:6939-6958 | None:intergenic | 40.0% | |
| TCCACCCTTGTGTTAGATTT+CGG | - | 51772:7774-7793 | MS.gene050771:intron | 40.0% | |
| TGAATGATTTCAGCTGGCTA+CGG | + | 51772:7245-7264 | None:intergenic | 40.0% | |
| TGACTTCAAATTCACCTGCT+CGG | + | 51772:8583-8602 | None:intergenic | 40.0% | |
| TGATCTATCAGACATGCACT+TGG | - | 51772:8354-8373 | MS.gene050771:CDS | 40.0% | |
| TGCCGTCTTAATGTAATGGT+TGG | - | 51772:8081-8100 | MS.gene050771:intron | 40.0% | |
| TGGTCTGCAAATAGACAAAC+TGG | - | 51772:8508-8527 | MS.gene050771:intron | 40.0% | |
| TGTCACACACTGATACATGT+CGG | - | 51772:5890-5909 | MS.gene050771:CDS | 40.0% | |
| TGTCTTTCCCACATTTCAAG+TGG | - | 51772:8457-8476 | MS.gene050771:CDS | 40.0% | |
| TTACATCAGCTACCCTACAA+AGG | + | 51772:5715-5734 | None:intergenic | 40.0% | |
| TTAGTTATCCCCCTACTCTT+TGG | + | 51772:7323-7342 | None:intergenic | 40.0% | |
| TTGATCGCTCCATTTGTAAC+TGG | - | 51772:5471-5490 | MS.gene050771:CDS | 40.0% | |
| TTGGTTACTGTATAACCTGC+TGG | - | 51772:7102-7121 | MS.gene050771:intron | 40.0% | |
| TTGTGTTAGATTTCGGCCTT+GGG | - | 51772:7781-7800 | MS.gene050771:intron | 40.0% | |
| ! | AAAGCTTTATCCCACTGAGT+AGG | + | 51772:7039-7058 | None:intergenic | 40.0% |
| ! | AAAGTCTTAAGCGTTGTGAC+TGG | - | 51772:6546-6565 | MS.gene050771:intron | 40.0% |
| ! | AAGCTTTATCCCACTGAGTA+GGG | + | 51772:7038-7057 | None:intergenic | 40.0% |
| ! | CCGATTGTTATTGTTGTGGA+CGG | + | 51772:6252-6271 | None:intergenic | 40.0% |
| ! | CTTGTAGTCATTGTGCCATT+TGG | - | 51772:6150-6169 | MS.gene050771:CDS | 40.0% |
| ! | GTGTCCGATTGTTATTGTTG+TGG | + | 51772:6256-6275 | None:intergenic | 40.0% |
| ! | TTTTTCTTCTCTCCGATTCC+GGG | - | 51772:5329-5348 | MS.gene050771:CDS | 40.0% |
| !! | CTTCAATCCTTGATGATGTG+AGG | - | 51772:7750-7769 | MS.gene050771:intron | 40.0% |
| !! | GCTCCATTTGTAACTGGTTT+TGG | - | 51772:5477-5496 | MS.gene050771:CDS | 40.0% |
| !! | GGGCTTGACTTTGTTTCTTT+TGG | - | 51772:6171-6190 | MS.gene050771:CDS | 40.0% |
| !!! | CTTTTGCTGACTTACTGAAC+AGG | - | 51772:7470-7489 | MS.gene050771:intron | 40.0% |
| !!! | TCGCGATGGAATCACTTTTT+TGG | - | 51772:5568-5587 | MS.gene050771:intron | 40.0% |
| AAGGGTTAACTGAACTCACC+CGG | + | 51772:5350-5369 | None:intergenic | 45.0% | |
| AATCAGGTAGACCAGTGATG+TGG | + | 51772:7709-7728 | None:intergenic | 45.0% | |
| ACGGAATCAACTGTCTTTCC+AGG | + | 51772:8120-8139 | None:intergenic | 45.0% | |
| ACTGATACATGTCGGTGCAA+TGG | - | 51772:5898-5917 | MS.gene050771:intron | 45.0% | |
| ATAAATGGCAAGGTACGCAG+CGG | - | 51772:7286-7305 | MS.gene050771:CDS | 45.0% | |
| ATCAGGTAGACCAGTGATGT+GGG | + | 51772:7708-7727 | None:intergenic | 45.0% | |
| ATGAGGAGGAGATGACAGAT+AGG | + | 51772:6214-6233 | None:intergenic | 45.0% | |
| CAAGGCCGAAATCTAACACA+AGG | + | 51772:7782-7801 | None:intergenic | 45.0% | |
| CTTCAGATTGAAGGTGAGAC+TGG | + | 51772:6278-6297 | None:intergenic | 45.0% | |
| CTTGTGTTAGATTTCGGCCT+TGG | - | 51772:7780-7799 | MS.gene050771:intron | 45.0% | |
| CTTTCATTTGTGCCTCCTGA+TGG | - | 51772:7818-7837 | MS.gene050771:intron | 45.0% | |
| GACTTCAAATTCACCTGCTC+GGG | + | 51772:8582-8601 | None:intergenic | 45.0% | |
| GCTGATCTGACTTCAACTCA+TGG | - | 51772:8177-8196 | MS.gene050771:CDS | 45.0% | |
| GGAACATTAGTGCTTGAGAC+TGG | - | 51772:8419-8438 | MS.gene050771:CDS | 45.0% | |
| GTACCCTACCGTTTCTACAA+AGG | - | 51772:8542-8561 | MS.gene050771:intron | 45.0% | |
| GTTGGCATGAGAAATGATCC+TGG | - | 51772:8099-8118 | MS.gene050771:intron | 45.0% | |
| TAACTGAACTCACCCGGAAT+CGG | + | 51772:5344-5363 | None:intergenic | 45.0% | |
| TCAGCTGATAAGATGCAAGG+AGG | + | 51772:8162-8181 | None:intergenic | 45.0% | |
| TGAAAATGTTGCCTGAGTGC+TGG | - | 51772:6356-6375 | MS.gene050771:intron | 45.0% | |
| TGTACCAACCAAAGAGTAGG+GGG | - | 51772:7312-7331 | MS.gene050771:CDS | 45.0% | |
| TTAGTCCTGCTATGCATAGC+AGG | - | 51772:6911-6930 | MS.gene050771:intron | 45.0% | |
| TTAGTGCCAACCCAGATTAG+AGG | + | 51772:7138-7157 | None:intergenic | 45.0% | |
| TTATCCCCCTACTCTTTGGT+TGG | + | 51772:7319-7338 | None:intergenic | 45.0% | |
| TTCATTCAGGGATGGTACTC+TGG | - | 51772:7646-7665 | MS.gene050771:intron | 45.0% | |
| TTTATCCCACTGAGTAGGGT+CGG | + | 51772:7034-7053 | None:intergenic | 45.0% | |
| TTTGCACCTCTAATCTGGGT+TGG | - | 51772:7129-7148 | MS.gene050771:intron | 45.0% | |
| ! | AAGCCACAGTTGACTTCAGA+TGG | - | 51772:8051-8070 | MS.gene050771:intron | 45.0% |
| ! | AGAGGTGCAAAAATACCAGC+AGG | + | 51772:7120-7139 | None:intergenic | 45.0% |
| ! | ATTGAGGGGGCTTTATCCTT+TGG | + | 51772:8395-8414 | None:intergenic | 45.0% |
| ! | CACAGTTGACTTCAGATGGT+GGG | - | 51772:8055-8074 | MS.gene050771:intron | 45.0% |
| ! | GAGCAGGTGAATTTGAAGTC+AGG | - | 51772:8582-8601 | MS.gene050771:CDS | 45.0% |
| ! | GGTTGTTGCTTGAAGGAATG+AGG | + | 51772:5509-5528 | None:intergenic | 45.0% |
| ! | TCGACTTCGGTTCCTTTTCA+AGG | - | 51772:6862-6881 | MS.gene050771:intron | 45.0% |
| ! | TTGAGGGGGCTTTATCCTTT+GGG | + | 51772:8394-8413 | None:intergenic | 45.0% |
| !! | ACTTCGGTTCCTTTTCAAGG+AGG | - | 51772:6865-6884 | MS.gene050771:intron | 45.0% |
| !! | TGGGTTGGTGAAGCAATAAC+AGG | + | 51772:5530-5549 | None:intergenic | 45.0% |
| !!! | ATTCATTTATTTTTAAATTA+TGG | - | 51772:6761-6780 | MS.gene050771:intron | 5.0% |
| !!! | ATTTTAAGAAAATAAAAATT+TGG | + | 51772:7971-7990 | None:intergenic | 5.0% |
| !!! | TTTTAAGAAAATAAAAATTT+GGG | + | 51772:7970-7989 | None:intergenic | 5.0% |
| AATAGCCGACCCTACTCAGT+GGG | - | 51772:7026-7045 | MS.gene050771:intron | 50.0% | |
| ACACAAGATGCTGTACTGCC+TGG | + | 51772:6600-6619 | None:intergenic | 50.0% | |
| ACCTCAATGGCCATCAAAGG+TGG | + | 51772:5614-5633 | None:intergenic | 50.0% | |
| AGGTCCCAAGCTCGGATATA+AGG | - | 51772:6931-6950 | MS.gene050771:intron | 50.0% | |
| CAGACATGCACTTGGTCCAT+TGG | - | 51772:8362-8381 | MS.gene050771:CDS | 50.0% | |
| CTTGTTCGCAACAGCATAGG+AGG | - | 51772:6050-6069 | MS.gene050771:intron | 50.0% | |
| GATAAAGCCCCCTCAATGTC+TGG | - | 51772:8398-8417 | MS.gene050771:CDS | 50.0% | |
| GCACTTGTTCGCAACAGCAT+AGG | - | 51772:6047-6066 | MS.gene050771:intron | 50.0% | |
| GCCGAAATCTAACACAAGGG+TGG | + | 51772:7778-7797 | None:intergenic | 50.0% | |
| GGTGGAACCTCACATCATCA+AGG | + | 51772:7760-7779 | None:intergenic | 50.0% | |
| GTACAGCATCTTGTGTTCCC+TGG | - | 51772:6604-6623 | MS.gene050771:intron | 50.0% | |
| TAATAGCCGACCCTACTCAG+TGG | - | 51772:7025-7044 | MS.gene050771:intron | 50.0% | |
| TGTCAGCTGCGGTATTGTGT+AGG | - | 51772:5867-5886 | MS.gene050771:CDS | 50.0% | |
| ! | CCACAGTTGACTTCAGATGG+TGG | - | 51772:8054-8073 | MS.gene050771:intron | 50.0% |
| ! | CCACCATCTGAAGTCAACTG+TGG | + | 51772:8057-8076 | None:intergenic | 50.0% |
| !! | GGGCTTTATCCTTTGGGATC+CGG | + | 51772:8388-8407 | None:intergenic | 50.0% |
| !! | TATTGGGTTGGTGTCAGCTG+CGG | - | 51772:5856-5875 | MS.gene050771:CDS | 50.0% |
| AATGTGAGCGACACGCTTCC+AGG | - | 51772:6579-6598 | MS.gene050771:intron | 55.0% | |
| AGAAAAGCCTGCCAGCACTC+AGG | + | 51772:6370-6389 | None:intergenic | 55.0% | |
| CATGCACTTGGTCCATTGGC+CGG | - | 51772:8366-8385 | MS.gene050771:CDS | 55.0% | |
| CATGTCGGTGCAATGGTCGT+TGG | - | 51772:5905-5924 | MS.gene050771:intron | 55.0% | |
| GCGGAGCTATCATCTCTTGC+AGG | + | 51772:6512-6531 | None:intergenic | 55.0% | |
| TGCATAGCAGGTCCCAAGCT+CGG | - | 51772:6923-6942 | MS.gene050771:intron | 55.0% | |
| TGGGACCTGCTATGCATAGC+AGG | + | 51772:6919-6938 | None:intergenic | 55.0% | |
| TTAGGGTCGGCTGTTCTCCA+GGG | + | 51772:6624-6643 | None:intergenic | 55.0% | |
| TTTCGAGCTCTTACCCGAGC+AGG | - | 51772:8566-8585 | MS.gene050771:intron | 55.0% | |
| ! | GCCACCTTTGATGGCCATTG+AGG | - | 51772:5610-5629 | MS.gene050771:intron | 55.0% |
| !! | AATGTTGCCTGAGTGCTGGC+AGG | - | 51772:6360-6379 | MS.gene050771:intron | 55.0% |
| !! | ATCATGGGTGTCGCTCTCTC+TGG | - | 51772:8488-8507 | MS.gene050771:intron | 55.0% |
| !! | ATCCTTTGGGATCCGGCCAA+TGG | + | 51772:8381-8400 | None:intergenic | 55.0% |
| CTTAGGGTCGGCTGTTCTCC+AGG | + | 51772:6625-6644 | None:intergenic | 60.0% | |
| GTCCATTGGCCGGATCCCAA+AGG | - | 51772:8376-8395 | MS.gene050771:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51772 | gene | 5316 | 8610 | 5316 | ID=MS.gene050771 |
| 51772 | mRNA | 5316 | 8610 | 5316 | ID=MS.gene050771.t1;Parent=MS.gene050771 |
| 51772 | exon | 8576 | 8610 | 8576 | ID=MS.gene050771.t1.exon1;Parent=MS.gene050771.t1 |
| 51772 | CDS | 8576 | 8610 | 8576 | ID=cds.MS.gene050771.t1;Parent=MS.gene050771.t1 |
| 51772 | exon | 8295 | 8493 | 8295 | ID=MS.gene050771.t1.exon2;Parent=MS.gene050771.t1 |
| 51772 | CDS | 8295 | 8493 | 8295 | ID=cds.MS.gene050771.t1;Parent=MS.gene050771.t1 |
| 51772 | exon | 8127 | 8216 | 8127 | ID=MS.gene050771.t1.exon3;Parent=MS.gene050771.t1 |
| 51772 | CDS | 8127 | 8216 | 8127 | ID=cds.MS.gene050771.t1;Parent=MS.gene050771.t1 |
| 51772 | exon | 7223 | 7470 | 7223 | ID=MS.gene050771.t1.exon4;Parent=MS.gene050771.t1 |
| 51772 | CDS | 7223 | 7470 | 7223 | ID=cds.MS.gene050771.t1;Parent=MS.gene050771.t1 |
| 51772 | exon | 6062 | 6271 | 6062 | ID=MS.gene050771.t1.exon5;Parent=MS.gene050771.t1 |
| 51772 | CDS | 6062 | 6271 | 6062 | ID=cds.MS.gene050771.t1;Parent=MS.gene050771.t1 |
| 51772 | exon | 5702 | 5909 | 5702 | ID=MS.gene050771.t1.exon6;Parent=MS.gene050771.t1 |
| 51772 | CDS | 5702 | 5909 | 5702 | ID=cds.MS.gene050771.t1;Parent=MS.gene050771.t1 |
| 51772 | exon | 5316 | 5561 | 5316 | ID=MS.gene050771.t1.exon7;Parent=MS.gene050771.t1 |
| 51772 | CDS | 5316 | 5561 | 5316 | ID=cds.MS.gene050771.t1;Parent=MS.gene050771.t1 |
| Gene Sequence |
| Protein sequence |
