Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050768.t1 | XP_013450438.1 | 99.5 | 411 | 2 | 0 | 1 | 411 | 1 | 411 | 2.30E-241 | 844.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050768.t1 | F4I562 | 78.3 | 414 | 86 | 1 | 1 | 410 | 1 | 414 | 9.9e-201 | 700.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050768.t1 | A0A072U533 | 99.5 | 411 | 2 | 0 | 1 | 411 | 1 | 411 | 1.7e-241 | 844.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050768 | MS.gene050771 | 0.983385 | 1.34E-157 | -1.69E-46 |
| MS.gene050768 | MS.gene23138 | 0.984274 | 4.36E-160 | -1.69E-46 |
| MS.gene050768 | MS.gene23142 | 0.999814 | 0.00E+00 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene86178 | MS.gene050768 | PPI |
| MS.gene067937 | MS.gene050768 | PPI |
| MS.gene068109 | MS.gene050768 | PPI |
| MS.gene027687 | MS.gene050768 | PPI |
| MS.gene44324 | MS.gene050768 | PPI |
| MS.gene015312 | MS.gene050768 | PPI |
| MS.gene050768 | MS.gene21470 | PPI |
| MS.gene050768 | MS.gene056431 | PPI |
| MS.gene09656 | MS.gene050768 | PPI |
| MS.gene050768 | MS.gene008864 | PPI |
| MS.gene050001 | MS.gene050768 | PPI |
| MS.gene050768 | MS.gene010105 | PPI |
| MS.gene059672 | MS.gene050768 | PPI |
| MS.gene29199 | MS.gene050768 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050768.t1 | MTR_7g111870 | 99.513 | 411 | 2 | 0 | 1 | 411 | 1 | 411 | 0.0 | 848 |
| MS.gene050768.t1 | MTR_7g111870 | 99.697 | 330 | 1 | 0 | 1 | 330 | 1 | 330 | 0.0 | 682 |
| MS.gene050768.t1 | MTR_5g033500 | 26.067 | 445 | 266 | 11 | 4 | 410 | 7 | 426 | 7.15e-46 | 164 |
| MS.gene050768.t1 | MTR_8g069565 | 26.424 | 439 | 272 | 12 | 4 | 410 | 7 | 426 | 1.30e-45 | 163 |
| MS.gene050768.t1 | MTR_3g112190 | 27.252 | 444 | 286 | 9 | 1 | 410 | 1 | 441 | 2.25e-44 | 160 |
| MS.gene050768.t1 | MTR_5g014330 | 29.315 | 365 | 220 | 11 | 76 | 410 | 81 | 437 | 2.38e-44 | 160 |
| MS.gene050768.t1 | MTR_5g066050 | 27.753 | 454 | 279 | 11 | 1 | 410 | 1 | 449 | 1.16e-43 | 158 |
| MS.gene050768.t1 | MTR_5g066050 | 27.912 | 455 | 278 | 11 | 1 | 410 | 1 | 450 | 3.24e-43 | 157 |
| MS.gene050768.t1 | MTR_5g014330 | 29.448 | 326 | 193 | 10 | 76 | 372 | 81 | 398 | 1.71e-39 | 146 |
| MS.gene050768.t1 | MTR_5g033500 | 27.358 | 318 | 181 | 6 | 4 | 293 | 7 | 302 | 3.99e-39 | 144 |
| MS.gene050768.t1 | MTR_4g022790 | 52.756 | 127 | 12 | 2 | 113 | 239 | 3 | 81 | 1.85e-31 | 115 |
| MS.gene050768.t1 | MTR_7g014365 | 44.828 | 116 | 32 | 3 | 108 | 223 | 24 | 107 | 5.92e-17 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050768.t1 | AT1G56590 | 78.261 | 414 | 86 | 1 | 1 | 410 | 1 | 414 | 0.0 | 703 |
| MS.gene050768.t1 | AT1G60780 | 29.494 | 356 | 212 | 8 | 79 | 410 | 86 | 426 | 3.13e-47 | 167 |
| MS.gene050768.t1 | AT1G10730 | 26.376 | 436 | 276 | 11 | 4 | 410 | 7 | 426 | 1.85e-44 | 160 |
| MS.gene050768.t1 | AT4G24550 | 27.974 | 454 | 278 | 12 | 1 | 410 | 2 | 450 | 4.86e-44 | 159 |
| MS.gene050768.t1 | AT4G24550 | 28.756 | 386 | 236 | 9 | 1 | 349 | 2 | 385 | 4.66e-43 | 155 |
| MS.gene050768.t1 | AT4G24550 | 29.333 | 375 | 226 | 9 | 1 | 338 | 2 | 374 | 1.41e-42 | 154 |
| MS.gene050768.t1 | AT5G46630 | 28.767 | 365 | 222 | 11 | 76 | 410 | 81 | 437 | 1.38e-41 | 152 |
| MS.gene050768.t1 | AT5G46630 | 29.023 | 348 | 210 | 10 | 76 | 394 | 81 | 420 | 2.38e-40 | 149 |
Find 0 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGATTAAATTGAAAAT+TGG | + | 51769:14255-14274 | None:intergenic | 10.0% |
| !! | AATTGATTAAATTGAAAATT+GGG | + | 51769:14254-14273 | None:intergenic | 10.0% |
| !!! | TTTTATTTTCTTAAAATTCT+GGG | - | 51769:16837-16856 | MS.gene050768:intron | 10.0% |
| !!! | TTTTTATTTTCTTAAAATTC+TGG | - | 51769:16836-16855 | MS.gene050768:intron | 10.0% |
| !! | AAAAACTTGAAAAAGATAAT+GGG | + | 51769:14412-14431 | None:intergenic | 15.0% |
| !! | AATTTAATGTGTATAAGTTA+AGG | + | 51769:16061-16080 | None:intergenic | 15.0% |
| !!! | TTGTTATTATGTTTGATAAA+TGG | - | 51769:16134-16153 | MS.gene050768:CDS | 15.0% |
| !! | AACCAAATAAATGATGAAAA+CGG | - | 51769:14969-14988 | MS.gene050768:CDS | 20.0% |
| !! | AATTTAAGCTAATGAATTAC+AGG | - | 51769:16706-16725 | MS.gene050768:intron | 20.0% |
| !! | ACTAACAACATATGATTATT+GGG | - | 51769:14703-14722 | MS.gene050768:CDS | 20.0% |
| !! | AGAAAAGAAACTAAATATCA+CGG | + | 51769:16285-16304 | None:intergenic | 20.0% |
| !! | AGCAATTATGTTATTAGATT+CGG | + | 51769:14939-14958 | None:intergenic | 20.0% |
| !! | ATCTACATAAACTTCATTAT+TGG | + | 51769:15515-15534 | None:intergenic | 20.0% |
| !! | GAAAAACTTGAAAAAGATAA+TGG | + | 51769:14413-14432 | None:intergenic | 20.0% |
| !! | TAATAACATAATTGCTATAG+AGG | - | 51769:14943-14962 | MS.gene050768:CDS | 20.0% |
| !!! | AATTTATAGTAAAGCATCTT+AGG | - | 51769:16077-16096 | MS.gene050768:intron | 20.0% |
| !!! | CTTAACTTTGACAATTTTAT+GGG | - | 51769:15599-15618 | MS.gene050768:intron | 20.0% |
| !!! | TCTTAACTTTGACAATTTTA+TGG | - | 51769:15598-15617 | MS.gene050768:intron | 20.0% |
| !!! | TTTGATTTGTTGTTTTGTTT+AGG | - | 51769:15262-15281 | MS.gene050768:intron | 20.0% |
| ! | AAAATTGGGAATTGAAGAAA+AGG | + | 51769:14240-14259 | None:intergenic | 25.0% |
| ! | AACAAAACAACAAATCAAAG+TGG | + | 51769:15261-15280 | None:intergenic | 25.0% |
| ! | AAGACTTTGCTAACAATATT+TGG | + | 51769:15397-15416 | None:intergenic | 25.0% |
| ! | AATAACAAAGTTGTCTTTGA+TGG | + | 51769:14634-14653 | None:intergenic | 25.0% |
| ! | AATTGAAGAAAAGGAAAGAA+GGG | + | 51769:14231-14250 | None:intergenic | 25.0% |
| ! | ACAAAACAACAAATCAAAGT+GGG | + | 51769:15260-15279 | None:intergenic | 25.0% |
| ! | AGACAGTTAAATAATACAAC+TGG | - | 51769:14808-14827 | MS.gene050768:intron | 25.0% |
| ! | AGTTAACATTCTTTCTAACA+AGG | - | 51769:17066-17085 | MS.gene050768:intron | 25.0% |
| ! | ATAAAATTTCAGCCGATATA+AGG | + | 51769:16394-16413 | None:intergenic | 25.0% |
| ! | ATAACTTAGTCAAATCCTTA+CGG | - | 51769:15850-15869 | MS.gene050768:intron | 25.0% |
| ! | ATGAAAGAAGTTGAAAGAAA+TGG | + | 51769:16469-16488 | None:intergenic | 25.0% |
| ! | ATTATGTTTGATAAATGGCA+AGG | - | 51769:16139-16158 | MS.gene050768:CDS | 25.0% |
| ! | ATTTGACTAAGTTATACGTT+GGG | + | 51769:15845-15864 | None:intergenic | 25.0% |
| ! | CAATAATCATATGTTGTTAG+TGG | + | 51769:14704-14723 | None:intergenic | 25.0% |
| ! | CACAAATGAAAGAATTTGAT+TGG | + | 51769:16673-16692 | None:intergenic | 25.0% |
| ! | CACTAACAACATATGATTAT+TGG | - | 51769:14702-14721 | MS.gene050768:CDS | 25.0% |
| ! | GATGTAATCAATGATTATCT+TGG | - | 51769:14591-14610 | MS.gene050768:CDS | 25.0% |
| ! | GGAACTAAAAATGAATTGAA+TGG | + | 51769:14557-14576 | None:intergenic | 25.0% |
| !! | AACCGTTTTCATCATTTATT+TGG | + | 51769:14974-14993 | None:intergenic | 25.0% |
| !! | AAGGTACTTACTTAATAAAC+AGG | - | 51769:17085-17104 | MS.gene050768:intron | 25.0% |
| !! | CATACTTGTTGCTAAAAATT+TGG | - | 51769:16486-16505 | MS.gene050768:intron | 25.0% |
| !! | CTAAAAATTTGGTTCATTCA+GGG | - | 51769:16497-16516 | MS.gene050768:intron | 25.0% |
| !!! | AATATTGACTTCCCAAATAA+CGG | + | 51769:16775-16794 | None:intergenic | 25.0% |
| !!! | CAAAACTTCATTTCTAGTAA+AGG | - | 51769:16244-16263 | MS.gene050768:CDS | 25.0% |
| !!! | CAACTTTGTTATTGTTTATG+AGG | - | 51769:14641-14660 | MS.gene050768:CDS | 25.0% |
| !!! | TCATTTTTAGTTCCTTTGTA+GGG | - | 51769:14563-14582 | MS.gene050768:intron | 25.0% |
| !!! | TTCATTTTTAGTTCCTTTGT+AGG | - | 51769:14562-14581 | MS.gene050768:intron | 25.0% |
| !!! | TTTGTTTCTTTTGGATTGAT+CGG | - | 51769:15043-15062 | MS.gene050768:CDS | 25.0% |
| AAATGGATGCAACAATAAAC+AGG | - | 51769:15545-15564 | MS.gene050768:intron | 30.0% | |
| AACGGTTTCAAATCCTAATT+AGG | + | 51769:16757-16776 | None:intergenic | 30.0% | |
| AAGAGTCAAAAGTAGAAGAA+AGG | + | 51769:15179-15198 | None:intergenic | 30.0% | |
| ACAACATATGATTATTGGGT+TGG | - | 51769:14707-14726 | MS.gene050768:CDS | 30.0% | |
| ACTTCATTATTGGCATACTT+AGG | + | 51769:15505-15524 | None:intergenic | 30.0% | |
| ACTTTGCTAACAATATTTGG+CGG | + | 51769:15394-15413 | None:intergenic | 30.0% | |
| ATAAGGAGATAGTTGTGTTA+GGG | - | 51769:15811-15830 | MS.gene050768:intron | 30.0% | |
| ATAATAATGCCTCCTTGAAA+AGG | + | 51769:15740-15759 | None:intergenic | 30.0% | |
| ATAGATTATGTGTTCGACTT+CGG | - | 51769:15712-15731 | MS.gene050768:intron | 30.0% | |
| ATATTAGGTTCTGTAGTTAG+TGG | + | 51769:15352-15371 | None:intergenic | 30.0% | |
| ATCTGACTATTTAGACTTGA+TGG | + | 51769:17146-17165 | None:intergenic | 30.0% | |
| CAAAACAACAAATCAAAGTG+GGG | + | 51769:15259-15278 | None:intergenic | 30.0% | |
| CATATATGAATGATTTCAGC+TGG | + | 51769:16114-16133 | None:intergenic | 30.0% | |
| CTAAAATCCACTTGAAATGT+GGG | + | 51769:17330-17349 | None:intergenic | 30.0% | |
| CTTCATTATTGGCATACTTA+GGG | + | 51769:15504-15523 | None:intergenic | 30.0% | |
| GAACTTGTGAAACCTTATAT+CGG | - | 51769:16379-16398 | MS.gene050768:intron | 30.0% | |
| GAATTGAAGAAAAGGAAAGA+AGG | + | 51769:14232-14251 | None:intergenic | 30.0% | |
| GATTTGACTAAGTTATACGT+TGG | + | 51769:15846-15865 | None:intergenic | 30.0% | |
| GCAAATGAAAGAGTTAAATC+AGG | + | 51769:16588-16607 | None:intergenic | 30.0% | |
| GTAATCAATGATTATCTTGG+CGG | - | 51769:14594-14613 | MS.gene050768:CDS | 30.0% | |
| GTGTGTTAAAATCTGTTTCA+TGG | - | 51769:16803-16822 | MS.gene050768:intron | 30.0% | |
| TATAAGGAGATAGTTGTGTT+AGG | - | 51769:15810-15829 | MS.gene050768:intron | 30.0% | |
| TGCATAAATACAGACTACTA+AGG | + | 51769:16446-16465 | None:intergenic | 30.0% | |
| TGTAGATCTTGTAGAACAAA+TGG | - | 51769:15528-15547 | MS.gene050768:intron | 30.0% | |
| TTCCTATGAATTGCAAATCA+TGG | + | 51769:14511-14530 | None:intergenic | 30.0% | |
| TTGAAAACTATTTCCCTGAT+TGG | - | 51769:15946-15965 | MS.gene050768:intron | 30.0% | |
| ! | AACTGTGGCTTTACATATAT+TGG | + | 51769:16905-16924 | None:intergenic | 30.0% |
| ! | ACTGTGGCTTTACATATATT+GGG | + | 51769:16904-16923 | None:intergenic | 30.0% |
| ! | AGGATTTGAAACCGTTATTT+GGG | - | 51769:16761-16780 | MS.gene050768:intron | 30.0% |
| ! | ATTAGCTTAAATTGTCCATC+AGG | + | 51769:16699-16718 | None:intergenic | 30.0% |
| ! | GCTAAAAATTTGGTTCATTC+AGG | - | 51769:16496-16515 | MS.gene050768:intron | 30.0% |
| ! | GTTTTTGTTAATGTAGCTGT+TGG | - | 51769:15303-15322 | MS.gene050768:intron | 30.0% |
| ! | TAGGATTTGAAACCGTTATT+TGG | - | 51769:16760-16779 | MS.gene050768:intron | 30.0% |
| !! | ACTTGAAAAAGATAATGGGT+TGG | + | 51769:14408-14427 | None:intergenic | 30.0% |
| !! | TATTTTTGCACCTCTAATCT+GGG | - | 51769:15988-16007 | MS.gene050768:intron | 30.0% |
| AAAACCTTTGTAGAAACGGT+AGG | + | 51769:17412-17431 | None:intergenic | 35.0% | |
| AAACCTTTGTAGAAACGGTA+GGG | + | 51769:17411-17430 | None:intergenic | 35.0% | |
| AAGCTGAAACTGAACGTTAA+CGG | + | 51769:17002-17021 | None:intergenic | 35.0% | |
| ACTAATGTTCCAGACATTGA+GGG | + | 51769:17273-17292 | None:intergenic | 35.0% | |
| AGAATTTGATTGGATTCCCA+AGG | + | 51769:16663-16682 | None:intergenic | 35.0% | |
| AGGTTATACAGTAACCAATC+AGG | + | 51769:15963-15982 | None:intergenic | 35.0% | |
| ATCATCTCTTGCAGGATATT+AGG | + | 51769:15367-15386 | None:intergenic | 35.0% | |
| ATCCCAAAACCAGTTACAAA+TGG | + | 51769:14346-14365 | None:intergenic | 35.0% | |
| ATTATTGGCATACTTAGGGT+CGG | + | 51769:15500-15519 | None:intergenic | 35.0% | |
| CCTAAAATCCACTTGAAATG+TGG | + | 51769:17331-17350 | None:intergenic | 35.0% | |
| CTATGTCTGATGTCCTAATT+AGG | - | 51769:16741-16760 | MS.gene050768:intron | 35.0% | |
| CTCGAAAACCTTTGTAGAAA+CGG | + | 51769:17416-17435 | None:intergenic | 35.0% | |
| GCATTGAAACTTCAGATTGA+AGG | + | 51769:15150-15169 | None:intergenic | 35.0% | |
| GGCATGTATTATTACCTCAA+TGG | + | 51769:14490-14509 | None:intergenic | 35.0% | |
| GGTTATACAGTAACCAATCA+GGG | + | 51769:15962-15981 | None:intergenic | 35.0% | |
| GTGTATAAGTTAAGGACACA+AGG | + | 51769:16053-16072 | None:intergenic | 35.0% | |
| TCTGATAGATCACGATGTAA+AGG | + | 51769:17209-17228 | None:intergenic | 35.0% | |
| TGCCAACCATTACATTAAGA+CGG | + | 51769:16949-16968 | None:intergenic | 35.0% | |
| TTGGATGAGATGATAGACAA+TGG | - | 51769:15322-15341 | MS.gene050768:intron | 35.0% | |
| TTTCAGAGCAAACGTTACAA+GGG | + | 51769:15204-15223 | None:intergenic | 35.0% | |
| ! | AAATTTGGTTCATTCAGGGA+TGG | - | 51769:16501-16520 | MS.gene050768:intron | 35.0% |
| ! | AATAACAGGTTGTTGCTTGA+AGG | + | 51769:14379-14398 | None:intergenic | 35.0% |
| ! | ATTCTAGAGAAACAACTCAC+TGG | - | 51769:14303-14322 | MS.gene050768:CDS | 35.0% |
| ! | ATTTTTCTTCTCTCCGATTC+CGG | - | 51769:14191-14210 | MS.gene050768:CDS | 35.0% |
| ! | CTGTGGCTTTACATATATTG+GGG | + | 51769:16903-16922 | None:intergenic | 35.0% |
| ! | TGCCATGATTTGCAATTCAT+AGG | - | 51769:14506-14525 | MS.gene050768:intron | 35.0% |
| ! | TTTTCAGAGCAAACGTTACA+AGG | + | 51769:15205-15224 | None:intergenic | 35.0% |
| ! | TTTTGGATTGATCGGAGTAT+AGG | - | 51769:15051-15070 | MS.gene050768:CDS | 35.0% |
| !! | CCACATTTCAAGTGGATTTT+AGG | - | 51769:17328-17347 | MS.gene050768:CDS | 35.0% |
| !! | GTATTTTTGCACCTCTAATC+TGG | - | 51769:15987-16006 | MS.gene050768:intron | 35.0% |
| !! | TTGTAGTCATTGTGCCATTT+GGG | - | 51769:15014-15033 | MS.gene050768:CDS | 35.0% |
| !!! | CAAGTGGATTTTAGGATCAT+GGG | - | 51769:17336-17355 | MS.gene050768:CDS | 35.0% |
| !!! | CTCCATTTGTAACTGGTTTT+GGG | - | 51769:14341-14360 | MS.gene050768:CDS | 35.0% |
| !!! | CTTTTTCAAGTTTTTCGCGA+TGG | - | 51769:14417-14436 | MS.gene050768:intron | 35.0% |
| !!! | TCAAGTGGATTTTAGGATCA+TGG | - | 51769:17335-17354 | MS.gene050768:CDS | 35.0% |
| AAGGCCGAAATCTAACACAA+GGG | + | 51769:16644-16663 | None:intergenic | 40.0% | |
| AGATCAGCTGATAAGATGCA+AGG | + | 51769:17028-17047 | None:intergenic | 40.0% | |
| AGATGTACCAACCAAAGAGT+AGG | - | 51769:16172-16191 | MS.gene050768:CDS | 40.0% | |
| AGCTTAAATTGTCCATCAGG+AGG | + | 51769:16696-16715 | None:intergenic | 40.0% | |
| AGTTGAAATGCCACCTTTGA+TGG | - | 51769:14464-14483 | MS.gene050768:intron | 40.0% | |
| ATAGCAGGACTAACATAGGT+AGG | + | 51769:15767-15786 | None:intergenic | 40.0% | |
| ATCTCCTTATATCCGAGCTT+GGG | + | 51769:15801-15820 | None:intergenic | 40.0% | |
| ATGCATAGCAGGACTAACAT+AGG | + | 51769:15771-15790 | None:intergenic | 40.0% | |
| ATGTACCAACCAAAGAGTAG+GGG | - | 51769:16174-16193 | MS.gene050768:CDS | 40.0% | |
| ATTACCTCAATGGCCATCAA+AGG | + | 51769:14480-14499 | None:intergenic | 40.0% | |
| ATTAGGACATCAGACATAGC+TGG | + | 51769:16740-16759 | None:intergenic | 40.0% | |
| ATTAGTGCTTGAGACTGGAA+TGG | - | 51769:17287-17306 | MS.gene050768:CDS | 40.0% | |
| CAAGTAAATTCCCACATCAC+TGG | - | 51769:16558-16577 | MS.gene050768:intron | 40.0% | |
| CACTAATGTTCCAGACATTG+AGG | + | 51769:17274-17293 | None:intergenic | 40.0% | |
| CCGTCCACAACAATAACAAT+CGG | - | 51769:15112-15131 | MS.gene050768:CDS | 40.0% | |
| CGATCTTGATTCATTCAGAG+AGG | - | 51769:14278-14297 | MS.gene050768:CDS | 40.0% | |
| CGTATTTGATTCATGCCGTA+AGG | + | 51769:15868-15887 | None:intergenic | 40.0% | |
| CTAATGTTCCAGACATTGAG+GGG | + | 51769:17272-17291 | None:intergenic | 40.0% | |
| CTCACATCATCAAGGATTGA+AGG | + | 51769:16615-16634 | None:intergenic | 40.0% | |
| CTGGTGAAGTGTGAGATTAA+TGG | - | 51769:16528-16547 | MS.gene050768:intron | 40.0% | |
| CTGTTCAGTAAGTCAGCAAA+AGG | + | 51769:16335-16354 | None:intergenic | 40.0% | |
| CTTTGAGCAAAGTTATGAGG+AGG | + | 51769:15091-15110 | None:intergenic | 40.0% | |
| GAAACAAAGTCAAGCCCAAA+TGG | + | 51769:15031-15050 | None:intergenic | 40.0% | |
| GAAGTGTGAGATTAATGGTG+AGG | - | 51769:16533-16552 | MS.gene050768:intron | 40.0% | |
| GACATGCCGTCTTAATGTAA+TGG | - | 51769:16940-16959 | MS.gene050768:intron | 40.0% | |
| GATGTACCAACCAAAGAGTA+GGG | - | 51769:16173-16192 | MS.gene050768:CDS | 40.0% | |
| GGACTTTGAGCAAAGTTATG+AGG | + | 51769:15094-15113 | None:intergenic | 40.0% | |
| TAATGTTCCAGACATTGAGG+GGG | + | 51769:17271-17290 | None:intergenic | 40.0% | |
| TACAAATGGAGCGATCAACA+CGG | + | 51769:14332-14351 | None:intergenic | 40.0% | |
| TATCTCCTTATATCCGAGCT+TGG | + | 51769:15802-15821 | None:intergenic | 40.0% | |
| TCCACCCTTGTGTTAGATTT+CGG | - | 51769:16637-16656 | MS.gene050768:intron | 40.0% | |
| TGAATGATTTCAGCTGGCTA+CGG | + | 51769:16108-16127 | None:intergenic | 40.0% | |
| TGACTTCAAATTCACCTGCT+CGG | + | 51769:17446-17465 | None:intergenic | 40.0% | |
| TGATCTATCAGACATGCACT+TGG | - | 51769:17217-17236 | MS.gene050768:CDS | 40.0% | |
| TGCCGTCTTAATGTAATGGT+TGG | - | 51769:16944-16963 | MS.gene050768:intron | 40.0% | |
| TGGTCTGCAAATAGACAAAC+TGG | - | 51769:17371-17390 | MS.gene050768:intron | 40.0% | |
| TGTCACACACTGATACATGT+CGG | - | 51769:14753-14772 | MS.gene050768:CDS | 40.0% | |
| TGTCTTTCCCACATTTCAAG+TGG | - | 51769:17320-17339 | MS.gene050768:CDS | 40.0% | |
| TTACATCAGCTACCCTACAA+AGG | + | 51769:14578-14597 | None:intergenic | 40.0% | |
| TTAGTTATCCCCCTACTCTT+TGG | + | 51769:16186-16205 | None:intergenic | 40.0% | |
| TTGATCGCTCCATTTGTAAC+TGG | - | 51769:14334-14353 | MS.gene050768:CDS | 40.0% | |
| TTGGTTACTGTATAACCTGC+TGG | - | 51769:15965-15984 | MS.gene050768:intron | 40.0% | |
| TTGTGTTAGATTTCGGCCTT+GGG | - | 51769:16644-16663 | MS.gene050768:intron | 40.0% | |
| ! | AAAGCTTTATCCCACTGAGT+AGG | + | 51769:15902-15921 | None:intergenic | 40.0% |
| ! | AAAGTCTTAAGCGTTGTGAC+TGG | - | 51769:15409-15428 | MS.gene050768:intron | 40.0% |
| ! | AAGCTTTATCCCACTGAGTA+GGG | + | 51769:15901-15920 | None:intergenic | 40.0% |
| ! | CCGATTGTTATTGTTGTGGA+CGG | + | 51769:15115-15134 | None:intergenic | 40.0% |
| ! | CTTGTAGTCATTGTGCCATT+TGG | - | 51769:15013-15032 | MS.gene050768:CDS | 40.0% |
| ! | GTGTCCGATTGTTATTGTTG+TGG | + | 51769:15119-15138 | None:intergenic | 40.0% |
| ! | TTTTTCTTCTCTCCGATTCC+GGG | - | 51769:14192-14211 | MS.gene050768:CDS | 40.0% |
| !! | CTTCAATCCTTGATGATGTG+AGG | - | 51769:16613-16632 | MS.gene050768:intron | 40.0% |
| !! | GCTCCATTTGTAACTGGTTT+TGG | - | 51769:14340-14359 | MS.gene050768:CDS | 40.0% |
| !! | GGGCTTGACTTTGTTTCTTT+TGG | - | 51769:15034-15053 | MS.gene050768:CDS | 40.0% |
| !!! | CTTTTGCTGACTTACTGAAC+AGG | - | 51769:16333-16352 | MS.gene050768:intron | 40.0% |
| !!! | TCGCGATGGAATCACTTTTT+TGG | - | 51769:14431-14450 | MS.gene050768:intron | 40.0% |
| AAGGGTTAACTGAACTCACC+CGG | + | 51769:14213-14232 | None:intergenic | 45.0% | |
| AATCAGGTAGACCAGTGATG+TGG | + | 51769:16572-16591 | None:intergenic | 45.0% | |
| ACGGAATCAACTGTCTTTCC+AGG | + | 51769:16983-17002 | None:intergenic | 45.0% | |
| ACTGATACATGTCGGTGCAA+TGG | - | 51769:14761-14780 | MS.gene050768:intron | 45.0% | |
| ATAAATGGCAAGGTACGCAG+CGG | - | 51769:16149-16168 | MS.gene050768:CDS | 45.0% | |
| ATCAGGTAGACCAGTGATGT+GGG | + | 51769:16571-16590 | None:intergenic | 45.0% | |
| ATGAGGAGGAGATGACAGAT+AGG | + | 51769:15077-15096 | None:intergenic | 45.0% | |
| CAAGGCCGAAATCTAACACA+AGG | + | 51769:16645-16664 | None:intergenic | 45.0% | |
| CTTCAGATTGAAGGTGAGAC+TGG | + | 51769:15141-15160 | None:intergenic | 45.0% | |
| CTTGTGTTAGATTTCGGCCT+TGG | - | 51769:16643-16662 | MS.gene050768:intron | 45.0% | |
| CTTTCATTTGTGCCTCCTGA+TGG | - | 51769:16681-16700 | MS.gene050768:intron | 45.0% | |
| GACTTCAAATTCACCTGCTC+GGG | + | 51769:17445-17464 | None:intergenic | 45.0% | |
| GCTGATCTGACTTCAACTCA+TGG | - | 51769:17040-17059 | MS.gene050768:CDS | 45.0% | |
| GGAACATTAGTGCTTGAGAC+TGG | - | 51769:17282-17301 | MS.gene050768:CDS | 45.0% | |
| GTACCCTACCGTTTCTACAA+AGG | - | 51769:17405-17424 | MS.gene050768:intron | 45.0% | |
| GTTGGCATGAGAAATGATCC+TGG | - | 51769:16962-16981 | MS.gene050768:intron | 45.0% | |
| TAACTGAACTCACCCGGAAT+CGG | + | 51769:14207-14226 | None:intergenic | 45.0% | |
| TCAGCTGATAAGATGCAAGG+AGG | + | 51769:17025-17044 | None:intergenic | 45.0% | |
| TGAAAATGTTGCCTGAGTGC+TGG | - | 51769:15219-15238 | MS.gene050768:intron | 45.0% | |
| TGTACCAACCAAAGAGTAGG+GGG | - | 51769:16175-16194 | MS.gene050768:CDS | 45.0% | |
| TTAGTCCTGCTATGCATAGC+AGG | - | 51769:15774-15793 | MS.gene050768:intron | 45.0% | |
| TTAGTGCCAACCCAGATTAG+AGG | + | 51769:16001-16020 | None:intergenic | 45.0% | |
| TTATCCCCCTACTCTTTGGT+TGG | + | 51769:16182-16201 | None:intergenic | 45.0% | |
| TTCATTCAGGGATGGTACTC+TGG | - | 51769:16509-16528 | MS.gene050768:intron | 45.0% | |
| TTTATCCCACTGAGTAGGGT+CGG | + | 51769:15897-15916 | None:intergenic | 45.0% | |
| TTTGCACCTCTAATCTGGGT+TGG | - | 51769:15992-16011 | MS.gene050768:intron | 45.0% | |
| ! | AAGCCACAGTTGACTTCAGA+TGG | - | 51769:16914-16933 | MS.gene050768:intron | 45.0% |
| ! | AGAGGTGCAAAAATACCAGC+AGG | + | 51769:15983-16002 | None:intergenic | 45.0% |
| ! | ATTGAGGGGGCTTTATCCTT+TGG | + | 51769:17258-17277 | None:intergenic | 45.0% |
| ! | CACAGTTGACTTCAGATGGT+GGG | - | 51769:16918-16937 | MS.gene050768:intron | 45.0% |
| ! | GAGCAGGTGAATTTGAAGTC+AGG | - | 51769:17445-17464 | MS.gene050768:CDS | 45.0% |
| ! | GGTTGTTGCTTGAAGGAATG+AGG | + | 51769:14372-14391 | None:intergenic | 45.0% |
| ! | TCGACTTCGGTTCCTTTTCA+AGG | - | 51769:15725-15744 | MS.gene050768:intron | 45.0% |
| ! | TTGAGGGGGCTTTATCCTTT+GGG | + | 51769:17257-17276 | None:intergenic | 45.0% |
| !! | ACTTCGGTTCCTTTTCAAGG+AGG | - | 51769:15728-15747 | MS.gene050768:intron | 45.0% |
| !! | TGGGTTGGTGAAGCAATAAC+AGG | + | 51769:14393-14412 | None:intergenic | 45.0% |
| !!! | ATTCATTTATTTTTAAATTA+TGG | - | 51769:15624-15643 | MS.gene050768:intron | 5.0% |
| !!! | ATTTTAAGAAAATAAAAATT+TGG | + | 51769:16834-16853 | None:intergenic | 5.0% |
| !!! | TTTTAAGAAAATAAAAATTT+GGG | + | 51769:16833-16852 | None:intergenic | 5.0% |
| AATAGCCGACCCTACTCAGT+GGG | - | 51769:15889-15908 | MS.gene050768:intron | 50.0% | |
| ACACAAGATGCTGTACTGCC+TGG | + | 51769:15463-15482 | None:intergenic | 50.0% | |
| ACCTCAATGGCCATCAAAGG+TGG | + | 51769:14477-14496 | None:intergenic | 50.0% | |
| AGGTCCCAAGCTCGGATATA+AGG | - | 51769:15794-15813 | MS.gene050768:intron | 50.0% | |
| CAGACATGCACTTGGTCCAT+TGG | - | 51769:17225-17244 | MS.gene050768:CDS | 50.0% | |
| CTTGTTCGCAACAGCATAGG+AGG | - | 51769:14913-14932 | MS.gene050768:intron | 50.0% | |
| GATAAAGCCCCCTCAATGTC+TGG | - | 51769:17261-17280 | MS.gene050768:CDS | 50.0% | |
| GCACTTGTTCGCAACAGCAT+AGG | - | 51769:14910-14929 | MS.gene050768:intron | 50.0% | |
| GCCGAAATCTAACACAAGGG+TGG | + | 51769:16641-16660 | None:intergenic | 50.0% | |
| GGTGGAACCTCACATCATCA+AGG | + | 51769:16623-16642 | None:intergenic | 50.0% | |
| GTACAGCATCTTGTGTTCCC+TGG | - | 51769:15467-15486 | MS.gene050768:intron | 50.0% | |
| TAATAGCCGACCCTACTCAG+TGG | - | 51769:15888-15907 | MS.gene050768:intron | 50.0% | |
| TGTCAGCTGCGGTATTGTGT+AGG | - | 51769:14730-14749 | MS.gene050768:CDS | 50.0% | |
| ! | CCACAGTTGACTTCAGATGG+TGG | - | 51769:16917-16936 | MS.gene050768:intron | 50.0% |
| ! | CCACCATCTGAAGTCAACTG+TGG | + | 51769:16920-16939 | None:intergenic | 50.0% |
| !! | GGGCTTTATCCTTTGGGATC+CGG | + | 51769:17251-17270 | None:intergenic | 50.0% |
| !! | TATTGGGTTGGTGTCAGCTG+CGG | - | 51769:14719-14738 | MS.gene050768:CDS | 50.0% |
| AATGTGAGCGACACGCTTCC+AGG | - | 51769:15442-15461 | MS.gene050768:intron | 55.0% | |
| AGAAAAGCCTGCCAGCACTC+AGG | + | 51769:15233-15252 | None:intergenic | 55.0% | |
| CATGCACTTGGTCCATTGGC+CGG | - | 51769:17229-17248 | MS.gene050768:CDS | 55.0% | |
| CATGTCGGTGCAATGGTCGT+TGG | - | 51769:14768-14787 | MS.gene050768:intron | 55.0% | |
| GCGGAGCTATCATCTCTTGC+AGG | + | 51769:15375-15394 | None:intergenic | 55.0% | |
| TGCATAGCAGGTCCCAAGCT+CGG | - | 51769:15786-15805 | MS.gene050768:intron | 55.0% | |
| TGGGACCTGCTATGCATAGC+AGG | + | 51769:15782-15801 | None:intergenic | 55.0% | |
| TTAGGGTCGGCTGTTCTCCA+GGG | + | 51769:15487-15506 | None:intergenic | 55.0% | |
| TTTCGAGCTCTTACCCGAGC+AGG | - | 51769:17429-17448 | MS.gene050768:intron | 55.0% | |
| ! | GCCACCTTTGATGGCCATTG+AGG | - | 51769:14473-14492 | MS.gene050768:intron | 55.0% |
| !! | AATGTTGCCTGAGTGCTGGC+AGG | - | 51769:15223-15242 | MS.gene050768:intron | 55.0% |
| !! | ATCATGGGTGTCGCTCTCTC+TGG | - | 51769:17351-17370 | MS.gene050768:intron | 55.0% |
| !! | ATCCTTTGGGATCCGGCCAA+TGG | + | 51769:17244-17263 | None:intergenic | 55.0% |
| CTTAGGGTCGGCTGTTCTCC+AGG | + | 51769:15488-15507 | None:intergenic | 60.0% | |
| GTCCATTGGCCGGATCCCAA+AGG | - | 51769:17239-17258 | MS.gene050768:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51769 | gene | 14179 | 17473 | 14179 | ID=MS.gene050768 |
| 51769 | mRNA | 14179 | 17473 | 14179 | ID=MS.gene050768.t1;Parent=MS.gene050768 |
| 51769 | exon | 17439 | 17473 | 17439 | ID=MS.gene050768.t1.exon1;Parent=MS.gene050768.t1 |
| 51769 | CDS | 17439 | 17473 | 17439 | ID=cds.MS.gene050768.t1;Parent=MS.gene050768.t1 |
| 51769 | exon | 17158 | 17356 | 17158 | ID=MS.gene050768.t1.exon2;Parent=MS.gene050768.t1 |
| 51769 | CDS | 17158 | 17356 | 17158 | ID=cds.MS.gene050768.t1;Parent=MS.gene050768.t1 |
| 51769 | exon | 16990 | 17079 | 16990 | ID=MS.gene050768.t1.exon3;Parent=MS.gene050768.t1 |
| 51769 | CDS | 16990 | 17079 | 16990 | ID=cds.MS.gene050768.t1;Parent=MS.gene050768.t1 |
| 51769 | exon | 16086 | 16333 | 16086 | ID=MS.gene050768.t1.exon4;Parent=MS.gene050768.t1 |
| 51769 | CDS | 16086 | 16333 | 16086 | ID=cds.MS.gene050768.t1;Parent=MS.gene050768.t1 |
| 51769 | exon | 14925 | 15134 | 14925 | ID=MS.gene050768.t1.exon5;Parent=MS.gene050768.t1 |
| 51769 | CDS | 14925 | 15134 | 14925 | ID=cds.MS.gene050768.t1;Parent=MS.gene050768.t1 |
| 51769 | exon | 14565 | 14772 | 14565 | ID=MS.gene050768.t1.exon6;Parent=MS.gene050768.t1 |
| 51769 | CDS | 14565 | 14772 | 14565 | ID=cds.MS.gene050768.t1;Parent=MS.gene050768.t1 |
| 51769 | exon | 14179 | 14424 | 14179 | ID=MS.gene050768.t1.exon7;Parent=MS.gene050768.t1 |
| 51769 | CDS | 14179 | 14424 | 14179 | ID=cds.MS.gene050768.t1;Parent=MS.gene050768.t1 |
| Gene Sequence |
| Protein sequence |
